BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020880
(320 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541506|ref|XP_002511817.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis]
gi|223548997|gb|EEF50486.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis]
Length = 318
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/316 (75%), Positives = 276/316 (87%), Gaps = 5/316 (1%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS--TPLPQLLLDALPHSFVFFDV 59
+KK+VLVVGGTGYLGQHLLQGLSEIE PYD+A THHS TP PQ LLDA+ HS F V
Sbjct: 3 TKKKVLVVGGTGYLGQHLLQGLSEIEDSPYDLAFTHHSNSTP-PQPLLDAVRHS-PSFHV 60
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL++G GF A+ +FGQPDVVVNCAA+S+PR CE DP +AMSIN+PSSLVNWLS+F E +
Sbjct: 61 DLQTGDGFQAITHEFGQPDVVVNCAAISLPRACEKDPATAMSINIPSSLVNWLSTF-EGR 119
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSK+ AEKFI E+C NF ILRSSII+G
Sbjct: 120 DTLLIHLSTDQVYEGVKSFYKEEDEAVPVNVYGKSKLEAEKFISERCLNFVILRSSIIFG 179
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQTISPVPKSLPIQWIDSVLSKGE++EFFHDE RCPVYV+DVV +IL+LTNRW+SE KQM
Sbjct: 180 PQTISPVPKSLPIQWIDSVLSKGEQIEFFHDEFRCPVYVKDVVAVILSLTNRWISESKQM 239
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
QLLLNVGGPDRVSRVQMAE VA+IRGY+++LIK VSA+SVDRGV SPADISM+I+++V+
Sbjct: 240 QLLLNVGGPDRVSRVQMAEAVADIRGYNSALIKSVSAASVDRGVLSPADISMNISRIVRE 299
Query: 300 LNIDPVTYKDGVKLTL 315
L+ P ++ GVKLTL
Sbjct: 300 LHFSPTPFRHGVKLTL 315
>gi|357514671|ref|XP_003627624.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]
gi|355521646|gb|AET02100.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]
Length = 317
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/319 (75%), Positives = 269/319 (84%), Gaps = 4/319 (1%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKK++L+VGGTGYLGQHLLQ S + VA T+HS+PL Q LLDA P S F VD
Sbjct: 1 MSKKKILIVGGTGYLGQHLLQ--SYYSNQSLTVAFTYHSSPLLQPLLDAFPDS-QSFQVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFDA++ FGQPDVVVNCAA+SVPR CENDPD+A +INVPSSLV WL SF +N
Sbjct: 58 LKSGIGFDAISNAFGQPDVVVNCAAISVPRACENDPDTANAINVPSSLVKWLQSFKQN-S 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAEKFI E NFAILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGEKSFYKEEDIPIPVNVYGKTKVAAEKFISENFPNFAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QT+SPVPKSLPIQWIDS LSK EKV FFHDE RCP++V+D+V IILALT++WLSE KQMQ
Sbjct: 177 QTVSPVPKSLPIQWIDSALSKREKVNFFHDEFRCPIFVKDLVTIILALTSQWLSEGKQMQ 236
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
LLLN GGPDRVSRV+MA+ VA+ RGY TSLIK VSAS+VDRGV+SPADISMDIT+LVQTL
Sbjct: 237 LLLNAGGPDRVSRVEMADAVAQFRGYDTSLIKAVSASTVDRGVKSPADISMDITRLVQTL 296
Query: 301 NIDPVTYKDGVKLTLAAEA 319
NI+PV++KDGVKLTL EA
Sbjct: 297 NINPVSFKDGVKLTLTTEA 315
>gi|225454083|ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Vitis vinifera]
gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/320 (73%), Positives = 273/320 (85%), Gaps = 3/320 (0%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AMSINVPSSLV WL SF E+
Sbjct: 59 LQSGEGFEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINVPSSLVKWLLSFEESN- 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GP
Sbjct: 118 TLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q ISPVPKSLPIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+
Sbjct: 178 QAISPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMK 237
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
L+LN GGPDRVSR Q+AE VA++RGY TSLIKPVSASSVDRGV+SP DISMDIT+L+QTL
Sbjct: 238 LILNAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTL 297
Query: 301 NIDPVTYKDGVKLTLAAEAT 320
+I P + + GV+LTL ++A+
Sbjct: 298 HISPTSLRVGVQLTLESQAS 317
>gi|297810115|ref|XP_002872941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318778|gb|EFH49200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/321 (72%), Positives = 269/321 (83%), Gaps = 4/321 (1%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M K +V++VGGTG+LGQHLLQ + G YDVA THHS+PLP+ LLDA PH F F V
Sbjct: 1 MDKTKVVIVGGTGFLGQHLLQAFAGNNGGDLYDVAFTHHSSPLPRRLLDAFPH-FPAFSV 59
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG GF++++ FGQPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLS+F NK
Sbjct: 60 DLKSGLGFNSISQDFGQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSTFERNK 119
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVYEGVKSFYKEEDE VNVYGKSKVAAE I +KC NFAILRSSII G
Sbjct: 120 -TLLIHLSTDQVYEGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQNFAILRSSIIVG 178
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW-LSEDKQ 238
PQT+SP+PK+LPIQWIDS L KG+ VEFFHDE RCP+YV+D+V I L L +RW +S++KQ
Sbjct: 179 PQTVSPLPKTLPIQWIDSSLKKGDTVEFFHDEFRCPIYVKDLVNITLKLIDRWVVSDEKQ 238
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
MQL+LN GGP+R+SRVQMA+VVAE+RGY SLIK VSASSVDRGV SPADISMDITKL+Q
Sbjct: 239 MQLVLNAGGPERLSRVQMAQVVAEVRGYDMSLIKHVSASSVDRGVVSPADISMDITKLIQ 298
Query: 299 TLNIDPVTYKDGVKLTLAAEA 319
TL I P ++KDGV+LTL +E+
Sbjct: 299 TLEITPTSFKDGVRLTLESES 319
>gi|356520448|ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Glycine max]
Length = 324
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/324 (72%), Positives = 266/324 (82%), Gaps = 7/324 (2%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIE---GKPY--DVAATHHSTPLPQLLLDALPHSFV 55
MSK ++LVVGGTGYLGQHLLQ G P+ D+A THHS+P PQ LLDA+P S
Sbjct: 1 MSKVKILVVGGTGYLGQHLLQAYVHANANNGTPFAFDLAFTHHSSPPPQPLLDAIPFSLP 60
Query: 56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
F VDLK+G GF+A++ FGQPDVVVNCAA+SVPR CE DP +A +INVPSSLV WL SF
Sbjct: 61 F-QVDLKTGFGFEAISNTFGQPDVVVNCAAISVPRACEIDPATAHAINVPSSLVKWLQSF 119
Query: 116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
E + LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAE+FI E NFAILRSS
Sbjct: 120 -EKRSTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENYPNFAILRSS 178
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
IIYGPQT+SPVPKSLPIQWID L+KGEKVEFFHDE RCP+YV+D+V IIL LT++W+SE
Sbjct: 179 IIYGPQTVSPVPKSLPIQWIDGALAKGEKVEFFHDEFRCPIYVKDLVTIILTLTSQWISE 238
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
KQMQLLLNVGG DRVSR+QMAE VAE RGY SLIK VSASSVDRGV+SPADISMDIT+
Sbjct: 239 GKQMQLLLNVGGADRVSRLQMAEAVAEFRGYDASLIKSVSASSVDRGVKSPADISMDITR 298
Query: 296 LVQTLNIDPVTYKDGVKLTLAAEA 319
LVQTL I PV++KDGV+LTL EA
Sbjct: 299 LVQTLRIHPVSFKDGVRLTLTTEA 322
>gi|30678677|ref|NP_191965.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656499|gb|AEE81899.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 327
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/320 (70%), Positives = 265/320 (82%), Gaps = 5/320 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+L+LN GGP+R+SRVQMA++VAE+RGY SLIK VSASS+DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301
Query: 300 LNIDPVTYKDGVKLTLAAEA 319
L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321
>gi|449454474|ref|XP_004144979.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
gi|449472854|ref|XP_004153715.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
Length = 314
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/317 (70%), Positives = 262/317 (82%), Gaps = 3/317 (0%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS P+ LL ALPH + F VD
Sbjct: 1 MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFD + FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++ WL SF E +
Sbjct: 59 LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVYEGV+SFY EEDE PVNVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPVNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
LLLNVGGP+RVSRV+MAE VAEIRG+ SLIK VSASS+DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297
Query: 301 NIDPVTYKDGVKLTLAA 317
+ PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314
>gi|449507663|ref|XP_004163095.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
Length = 314
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/317 (69%), Positives = 262/317 (82%), Gaps = 3/317 (0%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS P+ LL ALPH + F VD
Sbjct: 1 MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFD + FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++ WL SF E +
Sbjct: 59 LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVYEGV+SFY EEDE P+NVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPLNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
LLLNVGGP+RVSRV+MAE VAEIRG+ SLIK VSASS+DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297
Query: 301 NIDPVTYKDGVKLTLAA 317
+ PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314
>gi|110736655|dbj|BAF00291.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis
thaliana]
Length = 327
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/320 (69%), Positives = 264/320 (82%), Gaps = 5/320 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAIL SSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILGSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+L+LN GGP+R+SRVQMA++VAE+RGY SLIK VSASS+DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301
Query: 300 LNIDPVTYKDGVKLTLAAEA 319
L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321
>gi|334186246|ref|NP_001190643.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656502|gb|AEE81902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 331
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/324 (69%), Positives = 265/324 (81%), Gaps = 9/324 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS----VDRGVQSPADISMDITK 295
+L+LN GGP+R+SRVQMA++VAE+RGY SLIK VSASS +DRGV SPADISMDITK
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSLFCQIDRGVVSPADISMDITK 301
Query: 296 LVQTLNIDPVTYKDGVKLTLAAEA 319
L+ TL + P ++K+GV+LTL +E+
Sbjct: 302 LIHTLELSPTSFKEGVRLTLDSES 325
>gi|125584224|gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japonica Group]
Length = 386
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/320 (70%), Positives = 261/320 (81%), Gaps = 4/320 (1%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALAA--GGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV WL SF N
Sbjct: 58 LRSGDGLRAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNVPSSLVTWLLSFG-NDN 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAEKFI E+CSN+AILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+D+V ++L+LT WL++ K +Q
Sbjct: 177 QTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKAVQ 236
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+LLNVGGPDRVSR+QMAE VA++RGYS S+IK VSASSVDRGV SP DISMDITKL Q L
Sbjct: 237 VLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQML 296
Query: 301 NIDPVTYKDGVKLTLAAEAT 320
I P++++DGV+ TLAAEAT
Sbjct: 297 GIKPISFQDGVRATLAAEAT 316
>gi|356506285|ref|XP_003521916.1| PREDICTED: LOW QUALITY PROTEIN: methionine adenosyltransferase 2
subunit beta-like [Glycine max]
Length = 325
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/325 (70%), Positives = 260/325 (80%), Gaps = 12/325 (3%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSE--------IEGKPY--DVAATHHSTPLPQLLLDAL 50
MSK ++LVVGGT YLGQHLLQ + I G P+ D+A THHS+P P LLDA+
Sbjct: 1 MSKVKILVVGGTCYLGQHLLQVYAHANANANANISGTPFVFDLAFTHHSSPPPHPLLDAI 60
Query: 51 PHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVN 110
P S F VDLK+G GF+A++ FGQPDVVVNCAA+ VPR CE DP +A +IN+PSSLV
Sbjct: 61 PSSLPF-QVDLKTGLGFEAISNTFGQPDVVVNCAAIXVPRACEIDPATAHAINLPSSLVK 119
Query: 111 WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
WL SF E + LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAE+FI E C NFA
Sbjct: 120 WLQSF-EKRTTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENCPNFA 178
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
ILR SIIYGPQT+SPVPKSLP QWID L+K EKVEFF DE RCP+YV+D+V IILALT
Sbjct: 179 ILRCSIIYGPQTVSPVPKSLPNQWIDGALAKVEKVEFFQDEFRCPIYVKDLVNIILALTT 238
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
+W+SE KQMQLLLNVGG DRVSRVQMAE VA+ GY TSLIK +SASSVDRGV+SPADIS
Sbjct: 239 QWISEGKQMQLLLNVGGADRVSRVQMAEAVAQFXGYDTSLIKSMSASSVDRGVKSPADIS 298
Query: 291 MDITKLVQTLNIDPVTYKDGVKLTL 315
MDIT+LVQTL I PV++KDGV+LTL
Sbjct: 299 MDITRLVQTLRIHPVSFKDGVRLTL 323
>gi|147839168|emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera]
Length = 368
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/370 (63%), Positives = 273/370 (73%), Gaps = 53/370 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQ-------------------------PDVVVNCAALSVPRVCEND 95
L+SG GF+A++ FGQ P VVVNCAA+SVPR CE D
Sbjct: 59 LQSGEGFEAISRSFGQCEEKRYISSFRMFRLVAVKIWGNGKPHVVVNCAAISVPRSCEMD 118
Query: 96 PDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ------------------------- 130
P +AMSINVPSSLV WL SF E+ LLIHLSTDQ
Sbjct: 119 PAAAMSINVPSSLVKWLLSFEESN-TLLIHLSTDQGLINPTETFMREFWIQIDTDMADHP 177
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
VYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GPQ ISPVPKSL
Sbjct: 178 VYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGPQAISPVPKSL 237
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
PIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+L+LN GGPDR
Sbjct: 238 PIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLILNAGGPDR 297
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
VSR Q+AE VA++RGY TSLIKPVSASSVDRGV+SP DISMDIT+L+QTL+I P + + G
Sbjct: 298 VSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLRVG 357
Query: 311 VKLTLAAEAT 320
++LTL ++A+
Sbjct: 358 IQLTLESQAS 367
>gi|115449925|ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group]
gi|48716437|dbj|BAD23044.1| putative dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica
Group]
gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza sativa Japonica Group]
gi|215697942|dbj|BAG92141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 317
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/320 (69%), Positives = 261/320 (81%), Gaps = 4/320 (1%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALAA--GGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV WL SF N
Sbjct: 58 LRSGDGLRAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNVPSSLVTWLLSFG-NDN 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAEKFI E+CSN+AILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+D+V ++L+LT WL++ K +Q
Sbjct: 177 QTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKAVQ 236
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+LLNVGGPDRVSR+QMAE VA++RGYS S+IK VSASSVDRGV SP DISMDITKL Q L
Sbjct: 237 VLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQML 296
Query: 301 NIDPVTYKDGVKLTLAAEAT 320
I P++++DGV+ TLAAEA+
Sbjct: 297 GIKPISFQDGVRATLAAEAS 316
>gi|242063580|ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
gi|241932910|gb|EES06055.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
Length = 325
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/318 (69%), Positives = 260/318 (81%), Gaps = 4/318 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S + DVA THHS PQ LLDALP S F DL+
Sbjct: 11 RKRVLVVGGSGYLGQHLLAASSAADR--LDVAFTHHSPAPPQPLLDALP-SVRAFRADLR 67
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG G +A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 68 SGDGLEAISASFGQPHVVVNCAAMSVPRACEMDPPAAMATNVPSSLVNWLLSFG-NEDSL 126
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I E+CSN+AILRSSIIYGPQT
Sbjct: 127 LIHLSTDQVYEGVKSFYKEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYGPQT 186
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
ISPV KSLPIQWID VLS+G++VEFF+DE RCPVYV+D+V +IL+LT WLS +++Q+L
Sbjct: 187 ISPVAKSLPIQWIDGVLSQGQQVEFFNDEFRCPVYVKDMVDVILSLTKTWLSNGEKVQVL 246
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
LNVGGPDRVSR+QMAE VA +RGY +IK VSASSV+RGV SP DISMDITKL Q L I
Sbjct: 247 LNVGGPDRVSRLQMAESVAVVRGYDPRIIKSVSASSVNRGVASPPDISMDITKLTQILGI 306
Query: 303 DPVTYKDGVKLTLAAEAT 320
P++++DGV+ TL AEA+
Sbjct: 307 KPISFRDGVRSTLDAEAS 324
>gi|359489754|ref|XP_003633973.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Vitis vinifera]
Length = 301
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/320 (69%), Positives = 258/320 (80%), Gaps = 20/320 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG GF+A++ FGQ DP +AMSINVPSSLV WL SF E+
Sbjct: 59 LQSGEGFEAISRSFGQ-----------------MDPAAAMSINVPSSLVKWLLSFEESN- 100
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GP
Sbjct: 101 TLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGP 160
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q ISPVPKSLPIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+
Sbjct: 161 QAISPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMK 220
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
L+LN GGPDRVSR Q+AE VA++RGY TSLIKPVSASSVDRGV+SP DISMDIT+L+QTL
Sbjct: 221 LILNAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTL 280
Query: 301 NIDPVTYKDGVKLTLAAEAT 320
+I P + + GV+LTL ++A+
Sbjct: 281 HISPTSLRVGVQLTLESQAS 300
>gi|226504976|ref|NP_001150501.1| LOC100284132 [Zea mays]
gi|195639658|gb|ACG39297.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays]
Length = 350
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/317 (69%), Positives = 259/317 (81%), Gaps = 5/317 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 35 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 91
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N ++L
Sbjct: 92 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NDDSL 150
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 151 LIHLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 210
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQL 241
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W +D K++Q+
Sbjct: 211 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKKVQV 270
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
LLNVGGPDRVSR+QMAE VA +RGY+ S+IK VSASSV+RGV SP DISMDITKL Q L
Sbjct: 271 LLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQILG 330
Query: 302 IDPVTYKDGVKLTLAAE 318
I P++++DGV+ TL AE
Sbjct: 331 IKPISFQDGVRSTLDAE 347
>gi|326491931|dbj|BAJ98190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/321 (67%), Positives = 260/321 (80%), Gaps = 3/321 (0%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M ++RVLVVGG+GYLGQHLL L+ +G DVA THH P+ LLDALP F
Sbjct: 1 MERRRVLVVGGSGYLGQHLLAALATGGDGVGVDVAFTHHRGAAPRALLDALP-GVRAFRA 59
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL+SG G +AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV+W SF N
Sbjct: 60 DLRSGDGLEAVSESFGQPHVIVNCAAISVPRACEMDPAAAMATNVPSSLVDWSLSFG-ND 118
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LLIHLSTDQVYEGVKSFYKE DE PVN+YGKSKVAAEKF+ +KCSN+AILRSSIIYG
Sbjct: 119 KTLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYG 178
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SPV KSLPIQW+D+VLS+G++V+FF+DE RCPVYV+D+V +IL+LT WLS+ K++
Sbjct: 179 PQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKI 238
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
++LLNVGG DRVSR+QMAE VAE+RGYS S+IK V ASSV+RGV SP DISMDITKL QT
Sbjct: 239 RVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQT 298
Query: 300 LNIDPVTYKDGVKLTLAAEAT 320
L I P+T+ DGV+ TL EA+
Sbjct: 299 LGIKPITFLDGVRATLDTEAS 319
>gi|194708380|gb|ACF88274.1| unknown [Zea mays]
gi|413939554|gb|AFW74105.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays]
Length = 322
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/317 (69%), Positives = 259/317 (81%), Gaps = 5/317 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQL 241
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W +D K++Q+
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKKVQV 242
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
LLNVGGPDRVSR+QMAE VA +RGY+ S+IK VSASSV+RGV SP DISMDITKL Q L
Sbjct: 243 LLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQILG 302
Query: 302 IDPVTYKDGVKLTLAAE 318
I P++++DGV+ TL AE
Sbjct: 303 IKPISFQDGVRSTLDAE 319
>gi|357137717|ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Brachypodium distachyon]
Length = 326
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/322 (67%), Positives = 260/322 (80%), Gaps = 6/322 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
+KRVLVVGG+GYLGQHLL L+ G DVA THHS P+ LLDALP F
Sbjct: 6 RKRVLVVGGSGYLGQHLLAALASPGGGGGGVDVDVAFTHHSEAAPRQLLDALPR-LRAFR 64
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL+SG G + +A FGQP V+VNCAA+SVPR CE DP +AM+ N+PSSLVNW SF N
Sbjct: 65 VDLRSGDGLEDIAASFGQPHVIVNCAAISVPRACEMDPAAAMATNIPSSLVNWSLSFG-N 123
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++LLIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVA+EKFI E C N+AILRSSIIY
Sbjct: 124 SKSLLIHLSTDQVYEGVKSFYKEEDETLPVNMYGKSKVASEKFITENCPNYAILRSSIIY 183
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GPQTISPV KSLPIQW+D VLS+ ++V+FF+DE RCPVYV+D+V +ILALT +WLS+ K
Sbjct: 184 GPQTISPVAKSLPIQWMDGVLSQRQQVDFFNDEYRCPVYVKDMVDVILALTKKWLSDGKT 243
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q+LLNVGGPDRVSR+QMAE VA++RGYS S+IK V ASSV+RGV SP+DISMDIT+L Q
Sbjct: 244 IQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVPASSVNRGVASPSDISMDITRLTQ 303
Query: 299 TLNIDPVTYKDGVKLTLAAEAT 320
L I P+T++DGV+ TL AE++
Sbjct: 304 MLGIQPITFQDGVRATLDAESS 325
>gi|413939553|gb|AFW74104.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 326
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/321 (68%), Positives = 260/321 (80%), Gaps = 9/321 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL----SED-K 237
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W S+D K
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHASDDGK 242
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
++Q+LLNVGGPDRVSR+QMAE VA +RGY+ S+IK VSASSV+RGV SP DISMDITKL
Sbjct: 243 KVQVLLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLT 302
Query: 298 QTLNIDPVTYKDGVKLTLAAE 318
Q L I P++++DGV+ TL AE
Sbjct: 303 QILGIKPISFQDGVRSTLDAE 323
>gi|224032413|gb|ACN35282.1| unknown [Zea mays]
gi|413939552|gb|AFW74103.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 330
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 260/325 (80%), Gaps = 13/325 (4%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQ----PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
SG GF+A++ FGQ P VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N
Sbjct: 64 SGDGFEAISASFGQVMFQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-N 122
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+++LLI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIY
Sbjct: 123 EDSLLIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIY 182
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL----S 234
GPQTISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W S
Sbjct: 183 GPQTISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHAS 242
Query: 235 ED-KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+D K++Q+LLNVGGPDRVSR+QMAE VA +RGY+ S+IK VSASSV+RGV SP DISMDI
Sbjct: 243 DDGKKVQVLLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDI 302
Query: 294 TKLVQTLNIDPVTYKDGVKLTLAAE 318
TKL Q L I P++++DGV+ TL AE
Sbjct: 303 TKLTQILGIKPISFQDGVRSTLDAE 327
>gi|118486138|gb|ABK94912.1| unknown [Populus trichocarpa]
Length = 300
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/317 (69%), Positives = 252/317 (79%), Gaps = 22/317 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHS-TPLPQLLLDALPHSFVFFD 58
M KRVLVVGGTGYLGQH+L LS I + PYD+A T+HS + L + LLDA+PHS F
Sbjct: 1 METKRVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAF-H 59
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL +G GF ++A KFGQ DPD+AMSINVP SLVNWLSSF E
Sbjct: 60 VDLTTGDGFQSIASKFGQ------------------DPDAAMSINVPCSLVNWLSSF-EE 100
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI + N+AILRSSII+
Sbjct: 101 RDTLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIF 160
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GPQTISPV KSLPIQWID VLSK E+VEFFHDE RCPVYV+DVV IIL+L N+W+ E KQ
Sbjct: 161 GPQTISPVQKSLPIQWIDGVLSKKEQVEFFHDEFRCPVYVKDVVTIILSLINKWIIEGKQ 220
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
M+LLLNVGGPDRVSRVQMAE VA +RGY+TSLIK VSASSV RGV SPADISMDI+KL+Q
Sbjct: 221 MKLLLNVGGPDRVSRVQMAETVAHVRGYNTSLIKQVSASSVYRGVSSPADISMDISKLIQ 280
Query: 299 TLNIDPVTYKDGVKLTL 315
T++I P +++DGV LTL
Sbjct: 281 TVSISPTSFRDGVILTL 297
>gi|294463471|gb|ADE77265.1| unknown [Picea sitchensis]
Length = 317
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/318 (60%), Positives = 246/318 (77%), Gaps = 1/318 (0%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M K V+VVGG+GYLG HLLQ L+ + PYD+A T+HS P DA+ F VD
Sbjct: 1 MGKTLVVVVGGSGYLGLHLLQSLATLADNPYDIAFTYHSHLPPPPFFDAI-GPLHAFKVD 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G D+++ GQP VVVNCAA+SVPR CE +P +A +INVP L+ W+S+F++
Sbjct: 60 LQSGEGLDSISATLGQPHVVVNCAAISVPRACELNPSAATAINVPRPLIKWMSTFSDRGA 119
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE VN+YGKSKV AE +I S++AILRSSIIYGP
Sbjct: 120 PLLIHLSTDQVYEGVKSFYKEDDETNAVNMYGKSKVMAENYICSNFSSYAILRSSIIYGP 179
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ PV K+LPIQWID VLS G+++EFFHDE RCP+YV+DVV +IL+L +W S DK +Q
Sbjct: 180 HPVIPVEKTLPIQWIDGVLSSGKEIEFFHDEFRCPIYVKDVVNVILSLIRKWNSGDKCIQ 239
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++LNVGGPDRVSRVQMAEVV+E++GY +S IK VSA+SV+RGV SPADISMD++K+V+ L
Sbjct: 240 VVLNVGGPDRVSRVQMAEVVSELKGYDSSSIKSVSAASVNRGVASPADISMDVSKVVKLL 299
Query: 301 NIDPVTYKDGVKLTLAAE 318
I+P +KDGV+LTL ++
Sbjct: 300 GINPTPFKDGVQLTLESQ 317
>gi|218191852|gb|EEC74279.1| hypothetical protein OsI_09525 [Oryza sativa Indica Group]
Length = 290
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 164/221 (74%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
Query: 100 MSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE 159
M+ NVPSSLV WL SF N LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAE
Sbjct: 1 MATNVPSSLVTWLLSFG-NDNTLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAE 59
Query: 160 KFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR 219
KFI E+CSN+AILRSSIIYGPQTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+
Sbjct: 60 KFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVK 119
Query: 220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV 279
D+V ++L+LT WL++ K +Q+LLNVGGPDRVSR+QMAE VA++RGYS S+IK VSASSV
Sbjct: 120 DMVDVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSV 179
Query: 280 DRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT 320
DRGV SP DISMDITKL Q L I P++++DGV+ TLAAEAT
Sbjct: 180 DRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEAT 220
>gi|42572791|ref|NP_974492.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|124301070|gb|ABN04787.1| At4g00560 [Arabidopsis thaliana]
gi|332656500|gb|AEE81900.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 253
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/235 (70%), Positives = 190/235 (80%), Gaps = 5/235 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVS 236
>gi|168003982|ref|XP_001754691.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694312|gb|EDQ80661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 224/317 (70%), Gaps = 3/317 (0%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KK +L+VGG+GYLG HLL+ L+ +A T++S P P L+D LP+ F +DL+
Sbjct: 7 KKVILLVGGSGYLGLHLLEDLASPTCD-CTLAYTYNSHPAPAELVDKLPNVLAFH-LDLR 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG G ++ G PDV++NCAA+SVPR CE +P++A +INVP+ LV WL+ +
Sbjct: 65 SGEGLQEISKSLGTPDVLINCAAISVPRACEQEPEAAKAINVPTVLVQWLNDLGAAQPPF 124
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVY+G KSFY+E+DE PVN YG++KV AEK+I ++AILRSSIIYGPQ
Sbjct: 125 LIHLSTDQVYKGDKSFYEEKDETKPVNTYGETKVMAEKYIQSNYDHYAILRSSIIYGPQP 184
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
P+PK+LP+QWID VLS G +FF DE RCPVYV+DVV+ I L + + M LL
Sbjct: 185 FIPLPKTLPLQWIDGVLSSGSGADFFEDEYRCPVYVKDVVQAIKLLMEKHFCGMRPMYLL 244
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA-SSVDRGVQSPADISMDITKLVQTLN 301
LN+GGPDR+SR MAE VA++RGY T L++ VS+ ++V+RGV SP DISMD++K+V LN
Sbjct: 245 LNIGGPDRLSRAAMAETVAQVRGYDTKLVRRVSSQTAVNRGVVSPPDISMDVSKIVAELN 304
Query: 302 IDPVTYKDGVKLTLAAE 318
+ + GV +TL+++
Sbjct: 305 MKMTDFATGVAMTLSSK 321
>gi|224034499|gb|ACN36325.1| unknown [Zea mays]
Length = 247
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWF 233
>gi|413939555|gb|AFW74106.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 238
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWF 233
>gi|3047109|gb|AAC13620.1| F6N23.17 gene product [Arabidopsis thaliana]
gi|7267395|emb|CAB80865.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis
thaliana]
Length = 267
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 190/250 (76%), Gaps = 21/250 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQ---------------WIDSVLSKGEKVEFFHDECRCPVYVRDVVKI 224
PQT+SP+PK+LPIQ +IDS L KG+ V+FFHDE RCP+YV+D+V I
Sbjct: 182 PQTVSPLPKTLPIQVLLNTISQRYIYTLEFIDS-LKKGDTVDFFHDEFRCPIYVKDLVNI 240
Query: 225 ILALTNRWLS 234
L +RW+S
Sbjct: 241 TFKLIDRWVS 250
>gi|302780343|ref|XP_002971946.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii]
gi|300160245|gb|EFJ26863.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii]
Length = 309
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 210/314 (66%), Gaps = 7/314 (2%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVGG+GY+G HLL+ L+ P ++A T++S P P L + L V + VDL +G
Sbjct: 3 VLVVGGSGYVGLHLLKALAA-RYSPENIAYTYNSHPPP--LSEQL---GVGYRVDLTTGQ 56
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G +AL P VVVNCAA+SVPR CE +P AM++NVP +L+ +L+S LL+H
Sbjct: 57 GLQDLALSV-HPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVH 115
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STDQVYEG+K FY E DE PVNVYG SKV AE I N+AILRSSIIYGPQ +
Sbjct: 116 FSTDQVYEGIKQFYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVH 175
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
V K LP+QW+D LS + V+FFHDE RCP+++ DVVK++ L MQL+LN+
Sbjct: 176 VQKPLPVQWMDMALSARKPVDFFHDEYRCPIFIGDVVKVVALLITLSEQSGGAMQLVLNL 235
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
GGP+R+SR +MA+VVA ++GY SLI V ASSVDRGV SPADISMD+ KL TL I
Sbjct: 236 GGPERLSRAEMAQVVARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICLT 295
Query: 306 TYKDGVKLTLAAEA 319
+ +GV+ TL A
Sbjct: 296 PFDEGVRQTLMLAA 309
>gi|302791097|ref|XP_002977315.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii]
gi|300154685|gb|EFJ21319.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii]
Length = 309
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 209/314 (66%), Gaps = 7/314 (2%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVGG+GY+G HLL+ L+ P ++A T++S P P L + L V + VDL +G
Sbjct: 3 VLVVGGSGYVGLHLLKALAA-RYSPENIAYTYNSHPPP--LSEQL---GVGYRVDLTTGQ 56
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G +AL P VVVNCAA+SVPR CE +P AM++NVP +L+ +L+S LL+H
Sbjct: 57 GLQDLALSV-HPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVH 115
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STDQVYEG+K FY E DE PVNVYG SKV AE I N+AILRSSIIYGPQ +
Sbjct: 116 FSTDQVYEGIKQFYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVH 175
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
V K LP+QW+D LS V+FFHDE RCP+++ DVVK++ L MQL+LN+
Sbjct: 176 VQKPLPVQWMDMALSARRPVDFFHDEYRCPIFIGDVVKVVALLITLSEQSGGAMQLVLNL 235
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
GGP+R+SR +MA+VVA ++GY SLI V ASSVDRGV SPADISMD+ KL TL I
Sbjct: 236 GGPERLSRAEMAQVVARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICLT 295
Query: 306 TYKDGVKLTLAAEA 319
+ +GV+ TL A
Sbjct: 296 PFDEGVRQTLMLAA 309
>gi|42572789|ref|NP_974491.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656501|gb|AEE81901.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 201
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/197 (72%), Positives = 160/197 (81%), Gaps = 5/197 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWID 196
PQT+SP+PK+LPIQ I+
Sbjct: 182 PQTVSPLPKTLPIQMIN 198
>gi|224127570|ref|XP_002320107.1| predicted protein [Populus trichocarpa]
gi|222860880|gb|EEE98422.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/195 (73%), Positives = 161/195 (82%), Gaps = 4/195 (2%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHS-TPLPQLLLDALPHSFVFFD 58
M KRVLVVGGTGYLGQH+L LS I + PYD+A T+HS + L + LLDA+PHS F
Sbjct: 1 METKRVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAF-H 59
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL +G GF ++A KFGQP VVVNCAALSVPRVCE DPD+AMSINVP SLVNWLSSF E
Sbjct: 60 VDLTTGDGFQSIASKFGQPHVVVNCAALSVPRVCEKDPDAAMSINVPCSLVNWLSSF-EE 118
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI + N+AILRSSII+
Sbjct: 119 RDTLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIF 178
Query: 179 GPQTISPVPKSLPIQ 193
GPQTISPV KSLPIQ
Sbjct: 179 GPQTISPVQKSLPIQ 193
>gi|215697943|dbj|BAG92142.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 172
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 153/171 (89%)
Query: 150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH 209
+YGKSKVAAEKFI E+CSN+AILRSSIIYGPQTISPV KSLPIQW+DSVLS+G++V+FF+
Sbjct: 1 MYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFN 60
Query: 210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS 269
DE RCPVYV+D+V ++L+LT WL++ K +Q+LLNVGGPDRVSR+QMAE VA++RGYS S
Sbjct: 61 DEFRCPVYVKDMVDVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHS 120
Query: 270 LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT 320
+IK VSASSVDRGV SP DISMDITKL Q L I P++++DGV+ TLAAEA+
Sbjct: 121 IIKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEAS 171
>gi|384245244|gb|EIE18739.1| methionine adenosyltransferase regulatory beta subunit-related
[Coccomyxa subellipsoidea C-169]
Length = 317
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 190/319 (59%), Gaps = 22/319 (6%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K VLV GG+GYLGQ L+Q L++ + VA THHST P L D + VDL
Sbjct: 6 KPVVLVTGGSGYLGQFLVQALAKAN---FQVAFTHHSTAAPILRGDV-----TAYWVDLV 57
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS--SFTENKE 120
SG G + ++N AA+S P CE DPD+A ++NVPS L++ LS +
Sbjct: 58 SGEGLEQCISSLPSLSAIINTAAISSPGACEKDPDTARAVNVPSKLLDALSVHAGEHGSH 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVY+G +S ++EE+ PVN YGK+K+ AEK I E+ N ILRSSIIYGP
Sbjct: 118 PLFIHLSTDQVYDGSRSNWREEEAGNPVNAYGKTKLEAEKLIQERWPNCVILRSSIIYGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-------ALTNRWL 233
Q+ +PV ++L +Q++ L +G FF+DE R PV+V D+V ++L L+ RW
Sbjct: 178 QSPTPVSRALFLQFVARQLKEGTPTSFFNDEFRNPVFVDDIVSVVLRLLQPGTVLSGRW- 236
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
L+ N+GGP+R+SRV MA VAE+ GYS I +SSV+RGV SPADISM
Sbjct: 237 ----ACILVYNMGGPERLSRVDMAAKVAEVWGYSPDAIVSAPSSSVNRGVASPADISMTS 292
Query: 294 TKLVQTLNIDPVTYKDGVK 312
KL L + + + ++
Sbjct: 293 RKLETELGLRLTPFSEALQ 311
>gi|255084107|ref|XP_002508628.1| predicted protein [Micromonas sp. RCC299]
gi|226523905|gb|ACO69886.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 183/328 (55%), Gaps = 22/328 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYD-------VAATHHSTPLPQLLLDALPHSFVFF 57
RVL+VGG+GYLGQ LL+ L E +P D A ++ P+ L F
Sbjct: 2 RVLIVGGSGYLGQFLLKYLLE---RPEDEVIAVGYTYADENAGPIDHPLTKI--DRCRAF 56
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
VD +G G DA D+VVNCAA+S P CE + + AM++NVP+ L L +
Sbjct: 57 RVDAATGEGMDACVRAMAPLDLVVNCAAMSSPGKCEKEAELAMNLNVPTHLCRTLLEHNQ 116
Query: 118 NKEN---LLIHLSTDQVYEGVKSFYKEE-DEIAPVNVYGKSKVAAEKFIYEK--CSNFAI 171
E LL+HLSTDQVY+G E+ + +PVN YG+SK+ AE I E
Sbjct: 117 KSEAIAPLLVHLSTDQVYDGESPNSVEDVNAPSPVNTYGRSKLNAELHIAENYVAGRHVS 176
Query: 172 LRSSIIYGPQT-ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
LRSSII G Q + PV + L +I + L E V FF DE RCP+ D+V I+AL+
Sbjct: 177 LRSSIITGSQPPLRPVSRPLFHDFIVNSLKGDEAVTFFEDEYRCPIAAVDIVAHIVALS- 235
Query: 231 RWLSEDKQMQLLL--NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
+ +D + L+ N+GGPDR+SRV MA AE+ G S + ++ VS++SVDRGV SPAD
Sbjct: 236 KLAGKDAKTDWLMRYNMGGPDRLSRVDMARQTAEVLGVSDANVEAVSSASVDRGVISPAD 295
Query: 289 ISMDITKLVQTLNIDPVTYKDGVKLTLA 316
ISM KL + P+ +KD ++L L
Sbjct: 296 ISMLSNKLNSLTLVSPMGWKDQMRLALG 323
>gi|307102810|gb|EFN51077.1| hypothetical protein CHLNCDRAFT_141448 [Chlorella variabilis]
Length = 332
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 173/301 (57%), Gaps = 24/301 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ GGTGY GQ ++ + V TH S+ + LP F V+L G
Sbjct: 4 ILITGGTGYFGQFCVEFFA---ASGCQVGYTHWSSGPQRHCGKVLP-----FKVNLAKGE 55
Query: 66 GFDAV--------ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
G +A AL+ V+N AA+S P CE D +A ++NVP+ L+ L+ +
Sbjct: 56 GLEACLQGLTRGGALRL---VAVINAAAISQPAACERDEAAAAAVNVPTHLLAALAWHRQ 112
Query: 118 NK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
E LLIH+STDQVY+G K+ ++E D PVN YG++K+AAE+ + N AILRSS
Sbjct: 113 QHGAEPLLIHMSTDQVYDGSKARWREGDPPRPVNAYGRTKLAAERAVAAGWPNHAILRSS 172
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
II+GP+ PV + L +Q+ID L+ G+ FF+DE R P+ VRD++++ L NR +
Sbjct: 173 IIFGPEPPVPVGRPLFLQFIDGALAAGKPTTFFNDEWRSPIRVRDILRVCQTLINR---Q 229
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
D+ L N+GGPDR+SR MA VA GY +LI A+SV R SPADISMD ++
Sbjct: 230 DELQHRLFNMGGPDRLSRADMAAAVAAACGYDPALILAAPAASVPRPAPSPADISMDSSR 289
Query: 296 L 296
L
Sbjct: 290 L 290
>gi|159491675|ref|XP_001703785.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270466|gb|EDO96311.1| predicted protein [Chlamydomonas reinhardtii]
Length = 333
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 183/326 (56%), Gaps = 23/326 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ GG+GYLGQ LL G S G +DV + H T + L A P V VDL +G
Sbjct: 3 VLITGGSGYLGQFLLSG-SHFRGL-HDVLSQVHYTYGSRQLASA-PAGVVAHKVDLSTGE 59
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK---ENL 122
G A + VVNCAA+S P +CE PD+A ++NVP+ LV+ L + L
Sbjct: 60 GLTQ-AFEQTPFHAVVNCAAISQPALCETAPDTARAVNVPTHLVDCLLRQEAERGGLRAL 118
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF----AILRSSIIY 178
LIH+STDQV++G ++ +KE++ VNVYGKSK AE+ I + AILRSSIIY
Sbjct: 119 LIHISTDQVFDGSRAHWKEDEAGNQVNVYGKSKYEAEQHILVRTWGHPYPVAILRSSIIY 178
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV---VKIILALTNRWLSE 235
GP PVP+ L +Q+ +V + + FF DE R PV+VRD+ ++++A + L
Sbjct: 179 GPPAPDPVPRPLFLQFASAVSNPDKPTSFFQDEHRSPVHVRDLQRLTELLIAAHGQQLEA 238
Query: 236 ---------DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ + N GGP+R+SRV MA VA+ G I+ V ++SV RGV SP
Sbjct: 239 LAPGALATVAARRHRVYNAGGPERLSRVDMARQVADCLGCGHGSIESVPSASVARGVVSP 298
Query: 287 ADISMDITKLVQTLNIDPVTYKDGVK 312
DISMDI++L L P +++ ++
Sbjct: 299 PDISMDISRLQSDLGFKPAAFREAIR 324
>gi|302836329|ref|XP_002949725.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f.
nagariensis]
gi|300265084|gb|EFJ49277.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f.
nagariensis]
Length = 227
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 141/235 (60%), Gaps = 10/235 (4%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKS 137
VVNCAA+S P VCE+ P+ A S+NVPS L + + + LIH STDQVY+G +
Sbjct: 1 VVNCAAVSQPGVCESSPEVARSVNVPSHLAHCMLDQARRRGLCATLIHFSTDQVYDGSHA 60
Query: 138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
+KE + PVN YGK+K AE+ + + AILR+SIIYGP PV ++L +Q++ S
Sbjct: 61 LWKEGEPCGPVNTYGKTKWEAEQL--PESTPVAILRASIIYGPPPPDPVNRALFLQFVAS 118
Query: 198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
+ + FF DE R P+YVRD+ +++ L W + NVGGP+R+SRV MA
Sbjct: 119 AVRGSQPTAFFEDEWRSPIYVRDLERLVTRLLAPW------QHRIFNVGGPERLSRVDMA 172
Query: 258 EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
VA+ G I S +SV+RGV SPADISMD+++L L+ +++ +K
Sbjct: 173 RQVADALGCGYDAILATSTASVNRGVASPADISMDVSRLTDGLHFRTTPFREALK 227
>gi|428169456|gb|EKX38390.1| hypothetical protein GUITHDRAFT_115530 [Guillardia theta CCMP2712]
Length = 331
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 162/302 (53%), Gaps = 18/302 (5%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYD----VAATHHSTPLPQLLLDALPHSFVFFDVD 60
RVLV G +GYLGQ LL + D A T S +P + +D
Sbjct: 10 RVLVTGASGYLGQFLLDAIQAHNAGNQDPSIVCAGTFGSRA------GGIPANMTGIQMD 63
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S S F +PDVVVN AA+S P CE + A +INVP++L++ L +
Sbjct: 64 MTSASSIHKGVEDF-RPDVVVNLAAMSAPAACEKQQEEAEAINVPTALLDAL--LQVKSD 120
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L + +STDQ+++G Y EE + PVN YGK+K+ E+ + ++ N ILRSS+IYGP
Sbjct: 121 ALFVQVSTDQIFDGQHPVYDEESDALPVNQYGKTKLRFEQVLRDRWPNHVILRSSLIYGP 180
Query: 181 QTISPVPKSLP-IQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSE 235
++ +Q++D L+K + V F DE RCP+YV DVV I+L + +
Sbjct: 181 NPPRECVRTGSFLQFLDESLAKATAEQPVSLFGDEVRCPIYVNDVVAILLVFILHAKECM 240
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ L++GGP+R+SRV M E+V+ IRGYS+ IK V + + G SP DISM K
Sbjct: 241 SAPLTRTLSMGGPERLSRVAMGEIVSSIRGYSSDRIKSVRRAELQLGFTSPLDISMRSDK 300
Query: 296 LV 297
L
Sbjct: 301 LT 302
>gi|307103361|gb|EFN51622.1| hypothetical protein CHLNCDRAFT_140037 [Chlorella variabilis]
Length = 311
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 164/315 (52%), Gaps = 25/315 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ VLV G +GYLGQ +++ + GK + V T+ + P+ F VD
Sbjct: 1 MAQPAVLVTGASGYLGQFVVEWYA---GKGWKVGCTYRTGEAPKFG-----SGVQVFRVD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTENK 119
L SG G G V+NCAA + P CE + ++A ++NVP
Sbjct: 53 LGSGEGLHEGCDALGPLAAVINCAAQAAPAACEGEGEAAARAVNVP-------------- 98
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ +L+H+STD VY+G SFY+E+ E+ PVN YG++K E + + ILR SII+G
Sbjct: 99 QPVLVHISTDHVYDGGSSFYREDAELRPVNTYGRTKADGEAEVALRWRRHVILRPSIIFG 158
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV--VKIILALTNRWLSEDK 237
P +P+ + +Q++DS L+ + FF DE R P YV+D+ L
Sbjct: 159 PPPPNPIRRGQFLQFVDSCLAAQKPSTFFTDEWRTPTYVKDLVAACAAAVDACDALPAAP 218
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ NVGGP R++R+ MA VAE+RG+ +L P SA++V R +PADISMD + +
Sbjct: 219 PHARVFNVGGPARINRLDMALAVAEVRGHDPALALPGSAAAVARTCATPADISMDTSAVE 278
Query: 298 QTLNIDPVTYKDGVK 312
L + + + ++
Sbjct: 279 AVLGVRMTPFTEALR 293
>gi|303289653|ref|XP_003064114.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454430|gb|EEH51736.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 340
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 170/295 (57%), Gaps = 14/295 (4%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLVVGG+GYLGQ +L+ S+ V T+ ST LP D + H++ +VDL +G
Sbjct: 2 RVLVVGGSGYLGQFVLKAFSDAYPDTEWVGYTYKSTKLPIPPEDDV-HAY---EVDLATG 57
Query: 65 SGFDAV---ALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-K 119
G DA A K G+ D++VNCAA S P CE + +A ++NVPS L++ +++ +E
Sbjct: 58 EGADACIADATKGGESLDLIVNCAAASSPGWCEKNETAATALNVPSKLLDAMTAASETIG 117
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
E LLIH+STDQVY G + E+ A PVN Y +SK+ E+ + ++ + I R SII
Sbjct: 118 EPLLIHMSTDQVYGGDERRSTEDQCPANPVNAYARSKLKGEEEVAKRWAKHVIFRPSIIT 177
Query: 179 GPQ-TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
GPQ +PV + L + +I L + V FF DE R PV D+V + + +D
Sbjct: 178 GPQPPYAPVNRPLFLDFIVDALKGTKPVGFFVDEWRSPVCAHDIVGHVKIFAD--RRDDL 235
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ L N GGPDR+SRV MA VA G S + A SVDRG+ SPADISMD
Sbjct: 236 PRRRLFNCGGPDRLSRVDMALKVAAALGLSGAFSYSHCA-SVDRGLVSPADISMD 289
>gi|397575899|gb|EJK49954.1| hypothetical protein THAOC_31118 [Thalassiosira oceanica]
Length = 361
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 167/370 (45%), Gaps = 97/370 (26%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVL+ G +GY+GQHL++ LS G D LP++ L + F+ D++
Sbjct: 5 KRVLLTGASGYVGQHLIESLSTGTGAGED---------LPRMELYCCYNDLSTFEQDMRE 55
Query: 64 GSGFD---------------AVALKFGQP--------------DVVVNCAALSVPRVCEN 94
G + + F P D +V+ AALS P CEN
Sbjct: 56 AFGEEMSLSSDSKPKIRIQVVSGINFADPGYISRITNCCGDRFDCIVHLAALSSPTHCEN 115
Query: 95 DPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS 154
PD A IN P L+++ + +I+LSTDQVYEG+KSFY E D PVNVYG++
Sbjct: 116 HPDDAWKINCPVDLLSFKAP--------IIYLSTDQVYEGLKSFYSESDRTVPVNVYGRT 167
Query: 155 KVAAEKFI----------------------------YEKCSNFAILRSSIIYGPQTISPV 186
K+A E+ + + N LRSS+I GP PV
Sbjct: 168 KLAFERVLLRDGGDSSPLLSVDEAREDTERIPRAIEHTAAPNSVCLRSSLILGP----PV 223
Query: 187 P------KSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
P K IQ+I S L ++ +E R V+++DVV+ IL + LS ++Q
Sbjct: 224 PLRNGCRKGFDTFIQFISSRLESAAPTVYYTNEYRSVVHIKDVVRAILHFLSIALSNNEQ 283
Query: 239 M-QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR-----GVQSPADISMD 292
+ N+GG R SR +A VA S + P SA+ +R GV SP DISMD
Sbjct: 284 KGSQVYNLGGTTRASRYDIALAVA-----SQLKLDPASANGAERSVTTGGVASPPDISMD 338
Query: 293 ITKLVQTLNI 302
+ KL L +
Sbjct: 339 VHKLEAELGM 348
>gi|145355883|ref|XP_001422176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582416|gb|ABP00493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 261
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 138/253 (54%), Gaps = 18/253 (7%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN---LLIHLSTDQVYEGVK 136
V+NCAA+S P CE P+ A N P +L + +SS +++ L I LSTD VY+G +
Sbjct: 10 VINCAAMSSPGQCEAAPELARRANAPRALWSAISSIAQSRGKQAPLWIQLSTDHVYDGER 69
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT-ISPVPKSLPIQWI 195
+ E APVN YG SKV E+ + + +LRSSII GP+ ++ V ++L + +I
Sbjct: 70 ALSDESTACAPVNAYGASKVFCEETLAKDYPRSIVLRSSIITGPKAPLTDVERTLFLDFI 129
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
S +K F+ DE R P+ V D+V+++ L R +D + + N+GGPDRVSRV
Sbjct: 130 ASSFAKETPTTFYDDEFRSPICVFDIVRVVRTLLQR--HDDLPDRRVYNMGGPDRVSRVD 187
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVD----------RGVQSPADISMDITKLVQTLNID-- 303
MA VAE + ++ V S + RGV +P DISMD LV+ + D
Sbjct: 188 MANGVAEFLAKGDAAMEQVFKSKIAVASCAEAKALRGVAAPPDISMDSRALVREICQDWA 247
Query: 304 PVTYKDGVKLTLA 316
P ++++ + + A
Sbjct: 248 PRSFEEQIAVAFA 260
>gi|325105059|ref|YP_004274713.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145]
gi|324973907|gb|ADY52891.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145]
Length = 302
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 162/310 (52%), Gaps = 18/310 (5%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LGQ L + ++ K +++ AT T + +++ ++D+
Sbjct: 2 KKILVTGSNGLLGQKLTDAV--LKNKQFELIATGKGTNR-----HPVKEGYIYEEMDIID 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ K QPD ++N AA++ CE + +NV + V +L L
Sbjct: 55 KESIAFIVNKH-QPDAIINTAAMTNVDTCETQREECWLLNVTA--VEYLIDICRENSIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD +++G Y EE + P++ YG+SK+AAE+ + + ++AILR+ I+YG +
Sbjct: 112 IHLSTDFIFDGEDGPYTEEGQPNPLSYYGESKLAAEQLLEKSGIHYAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ + +S I W L KG + +D+ R P D+ I L L+ +K+ Q +
Sbjct: 170 NDMSRSNIILWAKGALEKGNPINVVNDQWRMPTLAEDLADICL------LAVEKEAQGVY 223
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G D +S +++ E VA+ G SLIKP+S++++++ + P + K ++ L +
Sbjct: 224 NASGKDLMSIIELVERVADYYGLDKSLIKPISSTTLNQAAKRPKRTGFILDKSIRELGYN 283
Query: 304 PVTYKDGVKL 313
P ++++G+++
Sbjct: 284 PHSFEEGIRI 293
>gi|423346321|ref|ZP_17324009.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
gi|409221119|gb|EKN14072.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
Length = 296
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 161/318 (50%), Gaps = 36/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G++G+ +L LSE G + H P+ H+FV D++
Sbjct: 2 KKILVIGANGFVGRRILDNLSE-NGACEVFGCSLHPDIRPEG-----NHTFVRLDIN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV F PDVVVNC+ALSVP CE + A +INV S V L+ E++ +
Sbjct: 53 --DYPAVEALFDHICPDVVVNCSALSVPDYCEQHREEAYAINV--SAVENLAYCCEHQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIHLSTD V++G Y EED AP+N YG +K E+ + C N+AI+R ++YG
Sbjct: 109 RLIHLSTDFVFDGRSDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
K+LP +Q + + L G+++ D+ R P +V D+ + L + +
Sbjct: 168 -------KALPGQHGNVLQLVKNRLEAGQEIRVVADQYRTPTWVEDIADGVERLVH---T 217
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+D + ++ G + +S +MA VA+ G SLI PV+ + P + + I
Sbjct: 218 DDSG---IYHICGAEYLSIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIE 274
Query: 295 KLVQTLNIDPVTYKDGVK 312
K + L P T ++G+K
Sbjct: 275 KAKRELGYRPHTLEEGLK 292
>gi|329963485|ref|ZP_08301014.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT
12057]
gi|328528656|gb|EGF55620.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT
12057]
Length = 317
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 152/317 (47%), Gaps = 23/317 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
+K+VL++G G+ G+ +L LS Y V L D P S + F D
Sbjct: 20 RKKVLIIGANGFTGRRVLDDLSR--NIAYRVTGC-------SLHDDICPGSGDYHFVRTD 70
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + + + +PDVVVN +ALSVP CE + A +IN+ + V+ L+ + +
Sbjct: 71 ICDNNALEKL-FEAVRPDVVVNTSALSVPDYCETHHEEADAINITA--VSRLAEYCRMHD 127
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V+ G Y EED PVN YG +K+ EK I C N+AI+R ++YG
Sbjct: 128 SRFIHLSTDFVFSGNTDRLYTEEDTPGPVNYYGHTKLEGEKRITAICENYAIVRVVVVYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P +Q + L E++ D+ R P YV D+ + + L NR
Sbjct: 188 AAL--PGQHGNILQLVADRLRNNEEIFVVSDQWRTPTYVGDISQGVEKLINR------PR 239
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G D ++ MA VA++ G SLI+PV+ ++ P + I K +
Sbjct: 240 NGIYHICGSDCLTIADMARRVADLLGLDRSLIRPVTTKEMNEKTPRPRFSGLSIEKACRE 299
Query: 300 LNIDPVTYKDGVKLTLA 316
L P T ++G+K+
Sbjct: 300 LGYQPHTLEEGMKIMFG 316
>gi|154489857|ref|ZP_02030118.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC
43184]
gi|423722878|ref|ZP_17697031.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
gi|154089299|gb|EDN88343.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae ATCC
43184]
gi|409242151|gb|EKN34916.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
Length = 296
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 159/318 (50%), Gaps = 36/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G++G+ +L LSE G + H P H+ V D++
Sbjct: 2 KKILVIGANGFVGRRILDNLSE-NGACEVFGCSLHPDIRP-----GGNHTSVRLDIN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV F PDVVVNC+ALSVP CE + A +INV S V L+ E++ +
Sbjct: 53 --DYPAVEALFDHICPDVVVNCSALSVPDYCEQHREEAYAINV--SAVENLAYCCEHQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIHLSTD V++G Y EED AP+N YG +K E+ + C N+AI+R ++YG
Sbjct: 109 RLIHLSTDFVFDGRSDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
K+LP +Q + + L G+++ D+ R P +V D+ + L + +
Sbjct: 168 -------KALPGQHGNVLQLVKNRLEAGQEIRVVADQYRTPTWVEDIADGVERLVH---T 217
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+D + ++ G + +S +MA VA+ G SLI PV+ + P + + I
Sbjct: 218 DDSG---IYHICGAEYLSIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIE 274
Query: 295 KLVQTLNIDPVTYKDGVK 312
K + L P T ++G+K
Sbjct: 275 KAKRELGYRPHTLEEGLK 292
>gi|428225024|ref|YP_007109121.1| dTDP-4-dehydrorhamnose reductase [Geitlerinema sp. PCC 7407]
gi|427984925|gb|AFY66069.1| dTDP-4-dehydrorhamnose reductase [Geitlerinema sp. PCC 7407]
Length = 305
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 156/293 (53%), Gaps = 23/293 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++ +LV G +G+LG +L Q ++ + V T+ + P+ ++ P VDL
Sbjct: 14 QETLLVTGASGFLGWNLCQQAAQR----WRVVGTYGAHPVAIAGVEMRP-------VDL- 61
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ G A + QP V++ AA S P +C+ P+ + INV ++++ L+ ++
Sbjct: 62 TDEGAIAALMASVQPAAVIHLAAQSSPNICQRSPEVSHRINVDAAVL--LAKLCADRAIP 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G +S Y+E D + P++VYG+ K AE+ I A+ R +++G
Sbjct: 120 LVFTSTDLVFDGRRSPYREADPVNPISVYGEQKAIAEEKILSLYPRAAVCRMPLMFG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
PV KS +QW+ L G+++ F DE R PV R V+ +L L+ + + L
Sbjct: 178 AGPVAKSF-LQWMLETLRSGQELALFTDEFRTPVSGRAAVQGLL------LALQQGVSGL 230
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
L++GGP+R++R + + +AE+ LI+P S +SV PAD+S+ T+
Sbjct: 231 LHLGGPERIARYEFGQRLAEVMDLPRDLIRPCSQASVASAAPRPADVSLVSTQ 283
>gi|412986107|emb|CCO17307.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 172/370 (46%), Gaps = 71/370 (19%)
Query: 6 VLVVGGTGYLGQHLLQGL----SEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
VLV GG+GYLGQ L++ L EI Y ++ S+ LP+ + + V D
Sbjct: 3 VLVSGGSGYLGQFLIERLLTLNKEINAVHYTCSS--ESSKLPESVHEQHKRRLVCHVCDF 60
Query: 62 KSGSGFDAVALKFGQPD---------VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
++G+G + K + + +VVNC ALS P+ CE + + A IN P+ L L
Sbjct: 61 ETGAGVEECVEKASKGEYLEGNKNLKLVVNCTALSQPKQCEENEEKARKINAPTHLCEAL 120
Query: 113 ----SSFTENKENLLIHLSTDQVYEGVKSFYKEED----EIAPVNVYGKSKVAAEKFIYE 164
+E + LL+H+STDQV+ G S +E+D P+N YG+SK AE ++ E
Sbjct: 121 MRKYGKGSEERVPLLVHMSTDQVFCGSYSNTREDDAREKAFEPINAYGRSKKYAESYLLE 180
Query: 165 KCSNFA--ILRSSIIYGPQ-TISPVPKSLPIQWIDSVL--------SKGEK--------- 204
A ILRSS+I GPQ V + L + +I ++GE+
Sbjct: 181 NYDKNALVILRSSVITGPQPPYRRVDRPLFLDFIAKTCPPNTRGQSAEGEEKEEVKDENA 240
Query: 205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL----------------LLNVGGP 248
VEF+ DE R PV D+ + I+ ++ ++ + + + GGP
Sbjct: 241 VEFWTDEFRNPVSRIDLTEAIVYCFEIFVGLRRKRDVSAFLFEEGGGSSDSTPIYHAGGP 300
Query: 249 DRVSRVQMAEVVAEIRGYSTSLIKP-----VSASSVDRGVQSPADISMDITKLVQTLNID 303
+R+SR M + S KP ++SS V++PADISMD TK + L
Sbjct: 301 ERLSRYDMVTIFCNTMRASKKRAKPAEKSKTTSSSAAAVVKTPADISMDSTKFMTVL--- 357
Query: 304 PVTYKDGVKL 313
++GV+L
Sbjct: 358 ----RNGVQL 363
>gi|393783919|ref|ZP_10372088.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salyersiae
CL02T12C01]
gi|392667578|gb|EIY61085.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salyersiae
CL02T12C01]
Length = 295
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 154/315 (48%), Gaps = 34/315 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSG 64
+L++G G+ G+ +L L + Y++ A+ L D P + F D++
Sbjct: 3 ILIIGANGFTGRRMLDDL--VSCGKYNMTAS-------SLRDDIAPGDGYRFIRADIRRA 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ A+ K PDVV+N +ALSVP CE A + NV + V L+ E + I
Sbjct: 54 AEVQAL-FKEVCPDVVINTSALSVPDFCETHHSEARATNVIA--VEHLAHACEQYGSRFI 110
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G + Y EED PVN YG +K+ E+ + E CSN+AI+R ++YG
Sbjct: 111 HLSTDFVFDGRSECLYTEEDAPNPVNYYGVTKLEGEQRVSEYCSNYAIVRVVVVYG---- 166
Query: 184 SPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
K+LP +Q + L GE V D+ R P +V D+ + + L +
Sbjct: 167 ----KALPGQHGNILQLVADKLRNGETVRVVSDQWRTPTFVGDISEGVERLMH------H 216
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ G D VS ++A VA++ G SLI+PV+ + P +DI K
Sbjct: 217 PRNGIYHICGSDCVSIAEIAYRVADVLGLDRSLIQPVTTEEMQEATPRPRFSGLDIAKAK 276
Query: 298 QTLNIDPVTYKDGVK 312
+ +N P T ++G+K
Sbjct: 277 REINYLPHTLEEGIK 291
>gi|308813466|ref|XP_003084039.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus
tauri]
gi|116055922|emb|CAL58455.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus
tauri]
Length = 319
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 1 MSKKRV--LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
M+ +RV V+G GYLGQ + L+ +DV + + +DA
Sbjct: 1 MATERVAACVLGADGYLGQFIALDLAH--SGAFDVVHACGRSGDEAIDVDAPSTLRRTSA 58
Query: 59 VDLKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
D S + + + + P VVVNCAA+S P CE +P++A N P L N + +
Sbjct: 59 CDFASIASCENIVRELFDYGATPRVVVNCAAMSAPGACERNPEAAKLANAPRFLWNAVKA 118
Query: 115 FTENKE---NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
+ + I LSTD VY+G E + APVN YG SKV E + + A
Sbjct: 119 EALTRSVQVPMWIQLSTDHVYDGRSPLSDESTKTAPVNAYGASKVFCEDALVQDLGARAV 178
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+LRSSII GP+ L E+ F+ DE R PV V D+ I+ +L
Sbjct: 179 VLRSSIITGPKP---------------PLKDDEQTSFYEDEFRSPVCVHDICHIVRSLAT 223
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD---------- 280
R + + N+GGPDRVSRV MA VAE + ++ V S +
Sbjct: 224 R--AGPSPTLRVYNMGGPDRVSRVDMANGVAEYLASGDAELESVYKSKIARASCTEARAL 281
Query: 281 RGVQSPADISMDITKLVQTLNID--PVTYKDGV 311
RGV +P DISMD + L++ + D P ++ D +
Sbjct: 282 RGVDAPPDISMDSSALIRDICRDWSPRSFSDQI 314
>gi|423306750|ref|ZP_17284749.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|423308662|ref|ZP_17286652.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T12C37]
gi|392678124|gb|EIY71533.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|392686767|gb|EIY80068.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T12C37]
Length = 299
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 23/319 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MARKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAMEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCKDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG P +Q + + L E+V D+ R P +V DV + + L N
Sbjct: 169 YGASL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLINH------ 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ G + ++ +A VA++ G + SLI+PV+ ++ P + I K+
Sbjct: 221 PQNGIYHLCGSECLTIADIAYWVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKVR 280
Query: 298 QTLNIDPVTYKDGVKLTLA 316
+ L P T ++G+KL
Sbjct: 281 RELGYRPHTLEEGIKLMFG 299
>gi|294646105|ref|ZP_06723768.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC
2a]
gi|294808300|ref|ZP_06767058.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides
xylanisolvens SD CC 1b]
gi|345510055|ref|ZP_08789633.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1]
gi|292638549|gb|EFF56904.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC
2a]
gi|294444519|gb|EFG13228.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides
xylanisolvens SD CC 1b]
gi|345454629|gb|EEO51200.2| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1]
Length = 310
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 156/326 (47%), Gaps = 45/326 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCS 167
+ IHLSTD V++G K F Y EED APVN YG +K E+ + E CS
Sbjct: 110 SRFIHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCS 168
Query: 168 NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV----K 223
+FAI+R +I+YG P +Q + + L G+++ D+ R P YV DV +
Sbjct: 169 SFAIIRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQR 226
Query: 224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
+I TN + ++ G + +S ++A VA+ G SLI PV+ ++
Sbjct: 227 LIAHPTNG----------IFHICGDECMSIAEIAYQVADYMGLDRSLIHPVTTEEMNETT 276
Query: 284 QSPADISMDITKLVQTLNIDPVTYKD 309
P M I K L +P K+
Sbjct: 277 PRPRFSGMSIDKARTMLGYEPQKLKE 302
>gi|319902306|ref|YP_004162034.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108]
gi|319417337|gb|ADV44448.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108]
Length = 311
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 151/316 (47%), Gaps = 23/316 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK+VL++G G+ G+ +L LS Y+V L D P+S + F +D
Sbjct: 14 KKKVLIIGANGFTGRRILNDLSH--NAAYEVTGC-------SLHDDICPNSGDYHFVRID 64
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + + QP V+N +ALSVP CE + A +IN+ + V L+
Sbjct: 65 IRDCKALNKLFEEV-QPYAVINTSALSVPDYCEIHHEEAEAINITA--VMHLAQHCRTHN 121
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LIHLSTD V++G K Y EED APVN YGK+K+ E+ I C+++AI R ++YG
Sbjct: 122 SRLIHLSTDFVFDGNTKRLYTEEDTPAPVNYYGKTKLEGERQIATICNDYAIARVVVVYG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P Q + + L E++ D+ R P +V DV + + L N
Sbjct: 182 --NALPGQHGNIFQLVANRLRNNEEIFVVSDQWRTPTFVGDVSQGVEKLINH------PH 233
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G D ++ +A VA+I G SLI P+S + P + I K +
Sbjct: 234 NGIYHICGGDCLTIAGIAYRVADILGLDRSLICPISTEEMKEKTPRPCFSGLSIEKARKE 293
Query: 300 LNIDPVTYKDGVKLTL 315
L P T +G++L
Sbjct: 294 LKYQPHTLDEGIRLMF 309
>gi|313146992|ref|ZP_07809185.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12]
gi|313135759|gb|EFR53119.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12]
Length = 296
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 156/321 (48%), Gaps = 36/321 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALP-HSFVFFDVDL 61
K +L++G G+ G+ +L LS KP Y+V L D P + F D+
Sbjct: 2 KNILIIGANGFTGRRILNDLS---AKPIYNVTGC-------SLRDDICPGKGYRFVRTDI 51
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 52 RDT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQY 106
Query: 120 ENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++Y
Sbjct: 107 GSRFIHLSTDFVFDGKSNQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVY 166
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNRWLS 234
G L Q + + L KGE + D+ R P +V D V K++ +N
Sbjct: 167 GKALTGQHGNIL--QLVANRLRKGEPIRVVSDQWRTPTFVGDISEGVKKLMFHPSNG--- 221
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+ ++ G + ++ ++A VA+ SLI+PV+ + P + I
Sbjct: 222 -------IYHICGNECLTIAEIAYRVADFLKLDRSLIEPVTTEEMQEATPRPRFSGLSIE 274
Query: 295 KLVQTLNIDPVTYKDGVKLTL 315
K + +P T ++G+ +L
Sbjct: 275 KAKTEIGYNPHTLEEGMAASL 295
>gi|256421363|ref|YP_003122016.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588]
gi|256036271|gb|ACU59815.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588]
Length = 297
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 156/310 (50%), Gaps = 20/310 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKS 63
+VL+ G G LGQHL+ +E Y V A+ LPQ +++ +L+
Sbjct: 2 KVLITGSNGLLGQHLIPVF--LEDSRYQVIASGRGPNRLPQ------QTGYIYEATNLRD 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + K+ QPD+V++ AA++ CE + D NV ++ +L E
Sbjct: 54 ATSVKHLLDKY-QPDIVIHAAAMTQVDDCERNKDLCWDTNVAAT--RYLLKAAEAHNTFF 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I LSTD V++G+K Y EED + P++ YG SKVAAE + +AI+R+ ++YG
Sbjct: 111 IFLSTDFVFDGLKGPYAEEDAVNPISYYGSSKVAAENMVRGSKLPWAIVRTVLVYGIAAD 170
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S +S I W+ + L +G+K++ D+ R P V+D LA+ + L DK+
Sbjct: 171 S--KRSNIITWVKNNLEQGKKLKVVDDQWRTPTLVQD-----LAVGCK-LVADKKAAGTF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ G + ++ QMA A+ +T L++ V A S + + PA I K V+ L
Sbjct: 223 HISGSETLTPYQMAVQTADYFKLNTQLLEKVDAKSFTQPAKRPAKTGFVIDKAVKELGFA 282
Query: 304 PVTYKDGVKL 313
P ++ +G+++
Sbjct: 283 PHSFDEGLEI 292
>gi|327400446|ref|YP_004341285.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6]
gi|327315954|gb|AEA46570.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6]
Length = 289
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G LG + + E + Y +H + + +D L + F+
Sbjct: 2 RIFITGGSGLLGHRIAEIALEKGYEVYSGYCHNHPSAGKPVKID-LSNPVSIFET----- 55
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PDV+++ AAL+ CE + + A INV + ++ + LI
Sbjct: 56 -------IKDAKPDVIMHTAALTNVDKCEKEKELAFRINVEGT--KAIAEAVRKLNSFLI 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y+EEDE PVN YG +K+ E++ C +F I R+ +IYG + S
Sbjct: 107 YVSTDYVFDGRKGMYREEDETNPVNYYGHTKLLGEQY----CKDFCIARTCVIYGAKPAS 162
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K + W+ L GEKV D+ P ++ K++L + +K ++ + +
Sbjct: 163 --GKVNFVLWLIDKLRNGEKVRIVTDQYITPTLNTNLAKMMLEIA------EKGLKGVFH 214
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ G RVSR + AE +A++ G +LI P ++ P D S+D +K V+ L+ P
Sbjct: 215 LAGATRVSRFEFAETLADVFGLDKTLITPSKMEEINWVAVRPKDSSLDTSKAVKLLDEKP 274
Query: 305 VTYKDGVKL 313
+ +K+
Sbjct: 275 YALEKALKV 283
>gi|423213762|ref|ZP_17200291.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens
CL03T12C04]
gi|392693419|gb|EIY86651.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens
CL03T12C04]
Length = 303
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 152/318 (47%), Gaps = 36/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRL-FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVY-----EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V+ E Y EED APVN YG +K E+ + E CS++AI+R +
Sbjct: 110 SRFIHLSTDFVFDEKINEDAGLLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVA 169
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV----KIILALTNR 231
I+YG P +Q + + L G+++ D+ R P YV DV ++I TN
Sbjct: 170 IVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAHPTNG 227
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ ++ G + +S ++A VA+ G SLI PV+ ++ P M
Sbjct: 228 ----------IFHICGVECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTPRPRFSGM 277
Query: 292 DITKLVQTLNIDPVTYKD 309
I K L P K+
Sbjct: 278 SIDKARTMLGYKPQKLKE 295
>gi|423277199|ref|ZP_17256113.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 610]
gi|404587675|gb|EKA92214.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 610]
Length = 297
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 156/317 (49%), Gaps = 26/317 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS A + ++ L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS---------AKSIYNVTGCSLRDDICPGKGYRFVRTDIQ 52
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 53 DT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQYG 107
Query: 121 NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++YG
Sbjct: 108 SRFIHLSTDFVFDGKSNQLYKEEDETSPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
L Q + + L KGE + D+ R P +V D+ + + L + S +
Sbjct: 168 KALTGQHGNIL--QLVANRLRKGETIRVVSDQWRTPTFVGDISEGVEKLM--FHSSNG-- 221
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + ++ ++A VA+ SLI+PV+ + P + I K
Sbjct: 222 --IYHICGNECLTIAEIAYRVADFLKLDRSLIEPVTTEEMQEATPRPRFSGLSIEKAKTE 279
Query: 300 LNIDPVTYKDGVKLTLA 316
+ +P T ++G+ L+
Sbjct: 280 IGYNPHTLEEGMAACLS 296
>gi|317479141|ref|ZP_07938281.1| RmlD substrate binding domain-containing protein [Bacteroides sp.
4_1_36]
gi|316904713|gb|EFV26527.1| RmlD substrate binding domain-containing protein [Bacteroides sp.
4_1_36]
Length = 300
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 153/319 (47%), Gaps = 23/319 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSH---------NVFYQTTGCSLHDDICPHSGDYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVKKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLISH------ 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ G + ++ +A VA++ G + SLI+PV+ ++ P + I K
Sbjct: 221 PQNGIYHLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAH 280
Query: 298 QTLNIDPVTYKDGVKLTLA 316
+ L P T ++G+KL
Sbjct: 281 RELGYQPYTLEEGIKLMFG 299
>gi|336401989|ref|ZP_08582734.1| hypothetical protein HMPREF0127_00047 [Bacteroides sp. 1_1_30]
gi|335948711|gb|EGN10413.1| hypothetical protein HMPREF0127_00047 [Bacteroides sp. 1_1_30]
Length = 310
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 45/326 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCS 167
+ IHLSTD V++G K F Y EED APVN YG +K E+ + E CS
Sbjct: 110 SRFIHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDIPAPVNYYGYTKWKGEEKVAETCS 168
Query: 168 NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV----K 223
++AI+R +I+YG P +Q + + L G+++ D+ R P YV DV +
Sbjct: 169 SYAIVRVAIVYGRAL--PGQHGNIVQLVMNRLKTGQEIRVVSDQWRTPTYVGDVSDGVQR 226
Query: 224 IILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
+I TN + ++ G + +S ++A VA+ G SLI PV+ ++
Sbjct: 227 LIAHPTNG----------IFHICGVECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETT 276
Query: 284 QSPADISMDITKLVQTLNIDPVTYKD 309
P M I K L P K+
Sbjct: 277 PRPRFSGMSIDKARTMLGYKPQKLKE 302
>gi|424663389|ref|ZP_18100426.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 616]
gi|404577079|gb|EKA81817.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 616]
Length = 297
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS A + ++ L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS---------AKSIYNVTGCSLRDDICPGKGYRFVRTDIR 52
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 53 DT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQYG 107
Query: 121 NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++YG
Sbjct: 108 SRFIHLSTDFVFDGKSNQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNRWLSE 235
L Q + + L KGE + D+ R P +V D V K++ +N
Sbjct: 168 KALTGQHGNIL--QLVANRLRKGETIRVVSDQWRTPTFVGDISEGVEKLMFHPSNG---- 221
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ ++ G + ++ ++A VA+ SLI+PV+ + P + I K
Sbjct: 222 ------IYHICGNECLTIAEIAYRVADFLKLDRSLIEPVTTEEMQEATPRPRFSGLSIEK 275
Query: 296 LVQTLNIDPVTYKDGVKLTLA 316
+ +P T ++G+ L+
Sbjct: 276 AKTEIGYNPHTLEEGMAACLS 296
>gi|393788011|ref|ZP_10376142.1| dTDP-4-dehydrorhamnose reductase [Bacteroides nordii CL02T12C05]
gi|392656224|gb|EIY49863.1| dTDP-4-dehydrorhamnose reductase [Bacteroides nordii CL02T12C05]
Length = 295
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 32/314 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L++G G+ G+ +L L + + Y++ A + + F D+++ S
Sbjct: 3 ILIIGANGFTGRWILNDL--VAREIYNITACSLRNDIQS------SDGYQFIRADIRNAS 54
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A+ K PDVV+N +ALSVP CE + A + N+ + V L+ E + IH
Sbjct: 55 EVRAL-FKEVCPDVVINTSALSVPDFCETHHNEARATNITA--VEHLARACEQYGSRFIH 111
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G Y EEDE PVN YG +K+ E+ + E C N+AI+R ++YG
Sbjct: 112 LSTDFVFDGRTDRLYTEEDEPNPVNYYGITKLEGEERVAECCGNYAIVRVVVVYG----- 166
Query: 185 PVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
K+LP +Q + + L GE + D+ R P +V D+ + L +
Sbjct: 167 ---KALPGQHGNIVQLVANKLRSGETIRVVSDQWRTPTFVGDISYAVEQLMH------HP 217
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ ++ G D VS +A VAE+ SLI PV+ + P + I K +
Sbjct: 218 RNGIYHICGSDCVSIADIAYRVAEVLKLDRSLILPVTTEEMQEATPRPRFSGLSIAKAKR 277
Query: 299 TLNIDPVTYKDGVK 312
+N P T ++G+K
Sbjct: 278 EINYTPHTLEEGIK 291
>gi|383111495|ref|ZP_09932305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2]
gi|313696786|gb|EFS33621.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2]
Length = 303
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ +L LS K Y V L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLSAC--KQYKVTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVKHL-FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEEDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV + L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTTNGIFHICGDECITIAEIAYQVADCMKLDRSLIHPATTEEMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|423225562|ref|ZP_17212029.1| dTDP-4-dehydrorhamnose reductase [Bacteroides cellulosilyticus
CL02T12C19]
gi|392632490|gb|EIY26450.1| dTDP-4-dehydrorhamnose reductase [Bacteroides cellulosilyticus
CL02T12C19]
Length = 299
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 146/315 (46%), Gaps = 21/315 (6%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDL 61
KK+VLV+G G+ G+ +L LS Y V H P D+ + F+ D+
Sbjct: 2 KKKVLVIGANGFTGRRILNDLSR--NDEYIVTGCSLHDDIAP----DSGNYRFISADI-- 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
G + + +P++V+N +ALSVP CE D A SINV + V L+ E
Sbjct: 54 -CQMGEQSALFREVRPNIVINTSALSVPDYCEAHRDEADSINV--NAVGQLAFRCEASAA 110
Query: 122 LLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V+ G Y EED PVN YG +K+ EK + E CSN+AI R ++YG
Sbjct: 111 RFIHLSTDFVFNGDTGQLYTEEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGA 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
P +Q + + L E++ D+ R P YV DV + I L N
Sbjct: 171 AL--PGQHGNILQLVANRLRNNEEIRVVSDQWRTPTYVGDVSQGIEKLINH------PNN 222
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ ++ G + ++ +A VA+ SLI PV+ + P + I K + L
Sbjct: 223 GIYHICGSECLTIADIAYRVADTLNLDYSLILPVTTKQMGETTPRPRFSGLSIEKARREL 282
Query: 301 NIDPVTYKDGVKLTL 315
P T ++G+KL
Sbjct: 283 GYQPHTLEEGIKLMF 297
>gi|409101326|ref|ZP_11221350.1| dTDP-4-dehydrorhamnose reductase [Pedobacter agri PB92]
Length = 302
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 26/314 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L G G LGQ + + + EG+ VA + P + H + + ++D+
Sbjct: 2 KTILTTGSNGLLGQKITEKVLA-EGRVKLVATSRGFNRYP------VSHGYEYAEMDI-- 52
Query: 64 GSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D ++F QPDV+++ AA++ E +S +NV S V L S E K
Sbjct: 53 ---LDVAQVRFVIERYQPDVIIHTAAMTNVDTAEASKESCYELNV--SAVKTLLSLCEEK 107
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V++G YKEED + PV+ YGKSKV AE+ + +N+AILR+ ++YG
Sbjct: 108 NIQLIHLSTDFVFDGANGPYKEEDAVNPVSYYGKSKVLAEELLKTSTANWAILRTILVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S + W L KG+ + +D+ R P D+ + L L+ +K
Sbjct: 168 --ITNDMSRSNIVLWAKGALEKGQPINVVNDQWRMPTLAEDLAEACL------LAVEKNA 219
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q + +V G D +S + VA+ S+I +S+ S+++ + P + K ++
Sbjct: 220 QGIYHVSGKDYMSIADLVRKVADYWSLDKSIISEISSDSLNQTAKRPVKTGFVLDKTIRD 279
Query: 300 LNIDPVTYKDGVKL 313
L+ P ++++G+K+
Sbjct: 280 LDYKPHSFEEGLKM 293
>gi|284162303|ref|YP_003400926.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631]
gi|284012300|gb|ADB58253.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631]
Length = 291
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 39/315 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS------TPLPQLLLDALPHSFVFFD 58
+V + GG+G LG + + E + Y+V + ++S P+ L D P+S V
Sbjct: 2 KVFITGGSGLLGSKVAEIALE---RGYNVYSGYNSHKPEFGEPVKFDLAD--PNSIVKVI 56
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D++ PDV+++ AAL+ CE + + A INV + + ++
Sbjct: 57 DDVR--------------PDVIIHSAALTDVDRCETEKELAYKINVEGTKI--VAEMARK 100
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+++STD V++G + YKEEDE P+N YG +K+ EK+ C +F I R+ +IY
Sbjct: 101 LGAFLVYISTDYVFDGERGMYKEEDETNPINYYGYTKLLGEKY----CQDFCIARTCVIY 156
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + S K+ W+ + L KGE V+ D+ P ++ K++L + R L E
Sbjct: 157 GARPAS--GKANFALWLINKLEKGECVKIITDQFITPTLNTNLAKMLLEIAERGLKE--- 211
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ ++ G RVSR + A+ +A G SLI P ++ + P D S+D++K +
Sbjct: 212 ---VFHLAGITRVSRFEFAKEIAREFGLDESLIVPSKMDEMNWIAKRPRDSSLDVSKAAR 268
Query: 299 TLNIDPVTYKDGVKL 313
LN P K +K+
Sbjct: 269 YLNEKPYDLKKALKV 283
>gi|160890313|ref|ZP_02071316.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492]
gi|156860045|gb|EDO53476.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis
ATCC 8492]
Length = 300
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 153/315 (48%), Gaps = 23/315 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PRQHGNVLQLVANRLRSNEEVFVVSDQWRTPTFVGDVSQGVEKLIS------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ G + ++ +A VA++ G + SLI+PV+ ++ P + I K
Sbjct: 221 PQNGIYHLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAS 280
Query: 298 QTLNIDPVTYKDGVK 312
+ L P T ++G+K
Sbjct: 281 RELGYQPRTLEEGIK 295
>gi|262406505|ref|ZP_06083054.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22]
gi|262355208|gb|EEZ04299.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 45/323 (13%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVDLKS 63
+++G G+ G+ +L LS T + L D LP+ + F + D+++
Sbjct: 1 MIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETDIRN 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E ++
Sbjct: 52 EADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYKSRF 108
Query: 124 IHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
IHLSTD V++G K F Y EED APVN YG +K E+ + E CS+FA
Sbjct: 109 IHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSSFA 167
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV----KIIL 226
I+R +I+YG P +Q + + L G+++ D+ R P YV DV ++I
Sbjct: 168 IIRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIA 225
Query: 227 ALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
TN + ++ G + +S ++A VA+ G SLI PV+ ++ P
Sbjct: 226 HPTNG----------IFHICGDECMSIAEIAYQVADYMGLDRSLIHPVTTEEMNETTPRP 275
Query: 287 ADISMDITKLVQTLNIDPVTYKD 309
M I K L +P K+
Sbjct: 276 RFSGMSIDKARTMLGYEPQKLKE 298
>gi|156328608|ref|XP_001618961.1| hypothetical protein NEMVEDRAFT_v1g224653 [Nematostella vectensis]
gi|156201079|gb|EDO26861.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 141/261 (54%), Gaps = 11/261 (4%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+ F ++D+D+ + F A LK +P ++N AA++ CEND + +NV ++V
Sbjct: 35 NDFEYYDIDITNKELFIASILKI-KPHYIINTAAMTNVDACENDKEGCYDLNV--NVVEN 91
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI 171
L + LIHLSTD +++GVK Y E+DE P++ YGK+K+ +EK + + NF I
Sbjct: 92 LIEVCQQINTHLIHLSTDFIFDGVKGNYTEDDEPNPLSYYGKTKLISEKLVQDSTINFTI 151
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
LR+ ++YG ++ + +S + W+ L +++ +D+ R P Y D LA+ +
Sbjct: 152 LRTILVYG--LVNDMSRSNIVLWVKESLENKKEITIVNDQYRTPTYAED-----LAIACK 204
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
LS DK + ++ +S ++A +A+ SL+KP+S +++++ P
Sbjct: 205 -LSIDKNATGVFHISSNQLLSIYEIALEIADAFQLDNSLVKPISTATLNQTANRPVKTGF 263
Query: 292 DITKLVQTLNIDPVTYKDGVK 312
D++K + L P ++K+ ++
Sbjct: 264 DLSKTNKELGFYPKSFKEDLQ 284
>gi|237718115|ref|ZP_04548596.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4]
gi|229452536|gb|EEO58327.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4]
Length = 303
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 151/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ +L LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + + G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTANGIFHTCGDECMTIAEIAYQVADYMKLDRSLIHPATTEEMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|270296883|ref|ZP_06203082.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20]
gi|270272870|gb|EFA18733.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20]
Length = 300
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 153/315 (48%), Gaps = 23/315 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLIS------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ G + ++ +A VA++ G + SLI+PV+ ++ P + I K
Sbjct: 221 PQNGIYHLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAH 280
Query: 298 QTLNIDPVTYKDGVK 312
+ L P T ++G+K
Sbjct: 281 RELGYQPRTLEEGIK 295
>gi|295084034|emb|CBK65557.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A]
Length = 310
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 43/327 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS V A + T L D P+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS--------VHAQYKVTGC-SLHPDISPNDVGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKCLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNV--TAVSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEG------------VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS+
Sbjct: 110 SRFIHLSTDFVFDGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSS 169
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV----KI 224
+AI+R +I+YG P +Q + + L G+++ D+ R P YV DV ++
Sbjct: 170 YAIVRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRL 227
Query: 225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
I TN + ++ G + +S ++A VA+ G SLI PV+ ++
Sbjct: 228 IAHPTNG----------IFHICGVECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTP 277
Query: 285 SPADISMDITKLVQTLNIDPVTYKDGV 311
P M I K L +P K+ +
Sbjct: 278 RPRFSGMSIDKARTMLGYEPQKLKEAL 304
>gi|293369744|ref|ZP_06616320.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD
CMC 3f]
gi|292635166|gb|EFF53682.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD
CMC 3f]
Length = 303
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVSHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTANGIFHICGDECMTIAEIAYQVADYMKLDRSLIHPTTTEEMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|423296281|ref|ZP_17274366.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL03T12C18]
gi|392670891|gb|EIY64369.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL03T12C18]
Length = 303
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTANGIFHICGDECMTIAEIAYQVADYMKLDRSLIHPTTTEEMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|336413563|ref|ZP_08593915.1| hypothetical protein HMPREF1017_01023 [Bacteroides ovatus
3_8_47FAA]
gi|335938607|gb|EGN00497.1| hypothetical protein HMPREF1017_01023 [Bacteroides ovatus
3_8_47FAA]
Length = 303
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTANGIFHICGDECMTIAEIAYQVADYMKLDRSLIHPATTEKMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|223999833|ref|XP_002289589.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974797|gb|EED93126.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 387
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 169/377 (44%), Gaps = 93/377 (24%)
Query: 4 KRVLVVGGTGYLGQHLL-----QGL-------SEIEGKP----------YDVAATHHSTP 41
K++L+ G +GY+GQH++ GL S++ P Y+V ++S
Sbjct: 8 KKILITGSSGYVGQHMISHIGIHGLVVQAPSSSDVNASPLSPSASVNQRYEVYCAYNS-- 65
Query: 42 LPQL------LLDALPHSFVFFDVDLKSGSGFDAVALKF---------GQPDVVVNCAAL 86
LP L + H V ++S S D + G DV+++ AAL
Sbjct: 66 LPNFEDDISNLFNGTAHKLHPSIVKMQSVSNIDFRNPNYIHKIQQACGGTVDVIIHLAAL 125
Query: 87 SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA 146
S P CE+ + A IN P L++ + ++++STDQVYEG K FY E DE
Sbjct: 126 SSPFYCESHAEEAWKINCPVELLSLKAP--------IMYMSTDQVYEGTKQFYGENDETV 177
Query: 147 PVNVYGKSKVAAEK------------------------FIYEKCSN-------FAILRSS 175
PVNVYG++K+A E+ F+ SN ILRSS
Sbjct: 178 PVNVYGRTKLAFERILLGGLGSSTLLTAKELGSSTLPEFLTNVISNNLRPHNKSVILRSS 237
Query: 176 IIYGPQTISPVP----KSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+I G T P P K P +Q+I+ L ++F +E R V++ DV+ I
Sbjct: 238 LILGKPT--PFPNGCRKGFPSFLQFIEDRLKNQISTDYFVNEYRSVVHLEDVIGSIRHFV 295
Query: 230 NRWLS------EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV 283
+ LS D+ +Q + N+GG RVSR ++A VA ++ + V+ GV
Sbjct: 296 LKALSPNDDTAADEGVQ-VFNLGGSTRVSRYELATFVATHLNTDSTAVNGVNRPKEGGGV 354
Query: 284 QSPADISMDITKLVQTL 300
SP DISM++ KL + L
Sbjct: 355 PSPPDISMNVDKLAREL 371
>gi|160884444|ref|ZP_02065447.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483]
gi|299146002|ref|ZP_07039070.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23]
gi|423286494|ref|ZP_17265345.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL02T12C04]
gi|156110183|gb|EDO11928.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus ATCC
8483]
gi|298516493|gb|EFI40374.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23]
gi|392675181|gb|EIY68623.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL02T12C04]
Length = 303
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D AP+N YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPINYYGYTKWKGEERVTETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P + ++ P
Sbjct: 222 ------EHTANGIFHICGDECMTIAEIAYQVADYMKLDRSLIHPATTEKMNESTPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIDKARTMLGYRPQKLKE 295
>gi|387791925|ref|YP_006256990.1| dTDP-4-dehydrorhamnose reductase [Solitalea canadensis DSM 3403]
gi|379654758|gb|AFD07814.1| dTDP-4-dehydrorhamnose reductase [Solitalea canadensis DSM 3403]
Length = 327
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+VL+ G G LGQ LL L Y V AT L + + +D+ +
Sbjct: 29 KKVLITGSNGLLGQKLLDKLRN--NSTYTVIATAKGVD------RYLEEGYSYESLDVTN 80
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ K +PD V++ AA++ CE+D + +NV + V + +
Sbjct: 81 HAEVIAIMQKH-KPDHVIHTAAMTNVDACESDKELCKKLNVDA--VQYFIEACKQTGAHF 137
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD +++G Y E P++ YG++K+ +E + +AILR+ I+YG +
Sbjct: 138 IHLSTDFIFDGADGPYDENAVANPLSYYGQTKLESELLLINSDIAYAILRTIIVYG--VV 195
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W L KG+K+ +D+ R P D+ I + L+ +K+ Q +
Sbjct: 196 KDMSRSNIILWAKGALEKGQKINVVNDQYRNPTLAEDLADICV------LAMEKRAQGIY 249
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G D +S +++ E VA+ SLI P+SA ++++ + P + K V+ L +
Sbjct: 250 NASGKDFMSILEIVERVADFWNLDKSLITPISAETLNQSAKRPVKTEFILDKSVKELGYN 309
Query: 304 PVTYKDGVKL 313
P ++++G+K+
Sbjct: 310 PHSFEEGLKI 319
>gi|86134015|ref|ZP_01052597.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152]
gi|85820878|gb|EAQ42025.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152]
Length = 299
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 136/261 (52%), Gaps = 11/261 (4%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+ F + +D+ + S LK +PD ++N AA++ CEND +NV +V W
Sbjct: 43 NDFQYISIDITNKSQLTEELLKI-KPDYIINTAAMTQVDACENDKAKCDILNVE--VVGW 99
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI 171
L+ + LIH+STD +++G K +YKE DE P++ YG SK+ +E+ + + N+ I
Sbjct: 100 LAVICQELSAHLIHISTDFIFDGKKGWYKEIDEPNPLSYYGLSKLKSEQVLEKSNINYTI 159
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
LR+ ++YG + + +S + W+ L ++ D+ R P YV D LAL +
Sbjct: 160 LRTILVYGK--VFDMSRSNIVLWVKESLENKREITIVDDQYRTPTYVED-----LALACK 212
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+S DK + N+ + +S +A+ +A + S IK +S +++++ P
Sbjct: 213 -ISMDKNATGIFNISSSELLSIFDIAKQIAAVFNLDDSYIKSISTATLNQTANRPIKTGF 271
Query: 292 DITKLVQTLNIDPVTYKDGVK 312
D++K + LN P T+KD ++
Sbjct: 272 DLSKTNKELNFYPKTFKDDLQ 292
>gi|298481164|ref|ZP_06999358.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22]
gi|298272738|gb|EFI14305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22]
Length = 310
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 157/331 (47%), Gaps = 55/331 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS V A + T L D P+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS--------VHAQYKVTGC-SLHPDISPNDVGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKCLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNV--TAVSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEG------------VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS+
Sbjct: 110 SRFIHLSTDFVFDGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSS 169
Query: 169 FAILRSSIIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
+AI+R +I+YG ++LP +Q + + L G+++ D+ R P YV DV
Sbjct: 170 YAIVRVAIVYG--------RALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVS 221
Query: 223 ----KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS 278
++I TN + ++ G + +S ++A VA+ G SLI PV+
Sbjct: 222 DGVQRLIAHPTNG----------IFHICGVECMSIAEIAYQVADYMGLDHSLIHPVTTEE 271
Query: 279 VDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
++ P M I K L P K+
Sbjct: 272 MNETTPRPRFSGMSIDKARTMLGYKPQKLKE 302
>gi|326799699|ref|YP_004317518.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
gi|326550463|gb|ADZ78848.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
Length = 306
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 4 KRVLVVGGTGYLGQH----LLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
KR+LV G G LGQ LLQG + G Y +A++ S + + D+
Sbjct: 2 KRLLVTGSNGLLGQKITDILLQG--QFPGFEY-IASSRGSDRF------GTSSRYRYLDL 52
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ A A++ +PD+++N AA+ CE +P+ + +NV + V L + E K
Sbjct: 53 DITHHEQV-AKAIETYRPDIIINTAAMPNVDACEREPEKSYEVNVVA--VAHLIAVCERK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V++G + Y+EED PVN YGK K+AAE+ I + +AI+R+ ++YG
Sbjct: 110 NIHLIHLSTDFVFDGEEGPYEEEDIPNPVNTYGKHKLAAEELIQKATCPWAIVRTILVYG 169
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S + W L G+ + +D+ R P D+ K L + R +
Sbjct: 170 --VLRDMSRSNIVLWAKGALENGQSIRVVNDQWRMPTLAEDLAKACLTIAER------KA 221
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G D S ++ E VA S I + + + + P + K +
Sbjct: 222 TGMYHISGKDMFSICEIVEAVAAYYRLDASFICKEKSEVLKQDARRPKRTGFILDKAYER 281
Query: 300 LNIDPVTYKDGVKL 313
L+ P ++ +G+KL
Sbjct: 282 LDYVPHSFGEGLKL 295
>gi|428297384|ref|YP_007135690.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 6303]
gi|428233928|gb|AFY99717.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 6303]
Length = 289
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 150/295 (50%), Gaps = 30/295 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG H+ Q +++ E + Y +HHS +P + L VDL
Sbjct: 2 KKLLITGASGFLGWHICQ-ITQQEWQVYGTYYSHHSE-IPGIKLQ---------KVDL-- 48
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F A+ F PD V++ AALS P C+N P + +INV +S + ++ + +
Sbjct: 49 -TDFQALKQLFHDIHPDAVIHTAALSQPNFCQNHPQESAAINVTAS--SNIAGLCADAQI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
STD V++G+ + YKE D + PVN+YG+ KV AE+ + +I R +++G
Sbjct: 106 PCAFTSTDLVFDGLNAPYKESDSVNPVNIYGEQKVLAEREMLAIYPQISICRMPLMFGAA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P KS +Q + L G+++ F DE R PV + + I++AL K+ Q
Sbjct: 166 T--PTSKSF-MQGFIATLKAGKELNLFIDEFRTPVSGKTAAQGILIAL--------KKSQ 214
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
++++GG +R+SR ++ E+ + + V P D+S+D +K
Sbjct: 215 GIIHLGGKERISRYDFGRLMVEVLELPNTSLTSCRQQDVKMSAPRPTDVSLDSSK 269
>gi|336409846|ref|ZP_08590328.1| hypothetical protein HMPREF1018_02344 [Bacteroides sp. 2_1_56FAA]
gi|335946227|gb|EGN08033.1| hypothetical protein HMPREF1018_02344 [Bacteroides sp. 2_1_56FAA]
Length = 296
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 42/324 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNR 231
K+LP +Q + + L GE + D+ R P +V D V K++ N
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTANG 221
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ ++ G + ++ ++A VA+ SLI+PV+ + P +
Sbjct: 222 ----------IYHICGSECLTIAEIAYRVADFLKLDRSLIEPVTTEEMKEATPRPRFSGL 271
Query: 292 DITKLVQTLNIDPVTYKDGVKLTL 315
I K + P T ++G++ +L
Sbjct: 272 SIEKAKAEIGYTPRTLEEGMEASL 295
>gi|53713484|ref|YP_099476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46]
gi|423271451|ref|ZP_17250421.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T00C42]
gi|423275644|ref|ZP_17254588.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T12C13]
gi|52216349|dbj|BAD48942.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46]
gi|392697147|gb|EIY90333.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T00C42]
gi|392701311|gb|EIY94470.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T12C13]
Length = 296
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 154/324 (47%), Gaps = 42/324 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G + YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNR 231
K+LP +Q + + L GE + D+ R P +V D V K++ N
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTANG 221
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ ++ G + ++ ++A VA+ SLI+PV+ + P +
Sbjct: 222 ----------IYHICGSECLTIAEIAYRVADFLKLDRSLIEPVTTEEMKETTPRPRFSGL 271
Query: 292 DITKLVQTLNIDPVTYKDGVKLTL 315
I K + P T ++G++ +L
Sbjct: 272 SIEKAKAEIGYTPRTLEEGMEASL 295
>gi|380695557|ref|ZP_09860416.1| dTDP-4-dehydrorhamnose reductase [Bacteroides faecis MAJ27]
Length = 302
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 146/320 (45%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K +L++G G+ G+ +L LS E Y+V L D LP+ + F D
Sbjct: 2 KNILIIGANGFTGRQILNDLSNKE--QYNVTGC-------SLHPDILPNGDGKYHFVTTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPD V+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRDEAAIKHL-FKEAQPDAVINCSALSVPDYCETHHEEAYLTNVTA--VEQLAYLCEIYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EE APVN YG +K E I E CSN+AI+R
Sbjct: 110 SRFIHLSTDFVFDGKIDENSGQLYTEESLPAPVNYYGFTKWKGENRIAEICSNYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV + L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDVSDGVQRLI 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SLI P++ + P
Sbjct: 222 ------ENTANGIFHICGDECMTIAEIAFHVADCMKLDRSLIHPITTKDMKEATPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P K+
Sbjct: 276 GMSIAKARTILGYRPRMLKE 295
>gi|423218418|ref|ZP_17204914.1| dTDP-4-dehydrorhamnose reductase [Bacteroides caccae CL03T12C61]
gi|392627921|gb|EIY21956.1| dTDP-4-dehydrorhamnose reductase [Bacteroides caccae CL03T12C61]
Length = 305
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 34/318 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G G+ G+ LL+ LS K Y+V HS P L + F +VD++
Sbjct: 2 RNILIIGANGFTGRQLLKDLSA--HKQYNVTGCSLHSDIFPAL---ENTKKYRFIEVDIR 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + K PDVV+NC+ALSVP CE + A INV + V L+ + ++
Sbjct: 57 NEASVKEL-FKAICPDVVINCSALSVPDYCETHHEEAYLINVTA--VEQLAHLCKEYQSR 113
Query: 123 LIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
IHLSTD V++G Y EE APVN YG +K E+ + + CSN+AI R I+
Sbjct: 114 FIHLSTDFVFDGKINERTGQLYTEEILPAPVNYYGFTKWKGEEKVADICSNYAIARVEIV 173
Query: 178 YGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
YG K+LP +Q + + L G+++ D+ R P +V D+ I L
Sbjct: 174 YG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTFVGDLSDGIRRLI-- 223
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ + ++ G + ++ ++A VA+ + +LI PV+ + P M
Sbjct: 224 ----ENTTNGIFHICGDECLTIAEIAYQVADYMKLNRTLIYPVTTEEMQESTPRPRFSGM 279
Query: 292 DITKLVQTLNIDPVTYKD 309
I K L +P K+
Sbjct: 280 SIEKARTILGYNPRKLKE 297
>gi|365875832|ref|ZP_09415357.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis Ag1]
gi|442587572|ref|ZP_21006388.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis R26]
gi|365756344|gb|EHM98258.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis Ag1]
gi|442562743|gb|ELR79962.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis R26]
Length = 307
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 155/303 (51%), Gaps = 18/303 (5%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+++ +L+ G G+LG+ L++ E G PY V AT L + LP + +F +++
Sbjct: 7 NRQIILITGSNGFLGRRLIK---EFSGLPYRVIAT----SLSDNKISDLPKNTIFRKLNI 59
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + ++ +P V+N A++ CE D D A +INV + L ++ + E+
Sbjct: 60 ADKEEVNHIFDEY-KPSFVINAGAVTNVEACEKDKDFAYAINVDAVLN--IAEQAKKYES 116
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L++ LSTD V++G YKE D+ PVN YG++K +E+ + E ++AILR+ ++YG
Sbjct: 117 LVVQLSTDFVFDGQNGPYKESDKRCPVNEYGRTKALSEEKLEESGCDYAILRTILVYG-N 175
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ P + + W+ +LS+G +++ ++ R P ++ D LA R + E K+ +
Sbjct: 176 SDDPDRGNF-VLWVKKMLSEGNEIKVVNNHWRMPTFIND-----LAEACRLVVE-KKAKG 228
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N+ G + S + A +A+ SLI +S+ + + P D++ + L
Sbjct: 229 IFNISGEEEYSIEEFARKIAQFYHLDESLITAISSEDIGQDKNRPVRTGFDLSHTKEQLG 288
Query: 302 IDP 304
P
Sbjct: 289 YRP 291
>gi|298385499|ref|ZP_06995057.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14]
gi|298261640|gb|EFI04506.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14]
Length = 302
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K ++++G G+ G+ +L LS Y V L D LP + + F D
Sbjct: 2 KNIMIIGANGFTGRQILNDLSS--KAQYKVTGC-------SLHPDILPRNGGNYHFITTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E+ +
Sbjct: 53 IRDEAAVKQL-FKEVQPDVVINCSALSVPDYCETHHEEAWLTNVTA--VEQLAHLCESYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EE APVN YG +K E+ + E CSN+AI R
Sbjct: 110 SRFIHLSTDFVFDGKIDEKSGQLYTEESLPAPVNYYGFTKWKGEEKVAEICSNYAIARVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV + L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDVSAGVQHLV 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SL+ P + + P
Sbjct: 222 ------ENAANGIFHICGEECLTIAEIAFQVADYMKLDCSLVHPATTEEIQEATPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P KD
Sbjct: 276 GMSIAKARTILGYQPRKLKD 295
>gi|60681728|ref|YP_211872.1| rhamnose biosynthesis-like protein [Bacteroides fragilis NCTC 9343]
gi|375358590|ref|YP_005111362.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis 638R]
gi|383118456|ref|ZP_09939198.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5]
gi|423250090|ref|ZP_17231106.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|423255590|ref|ZP_17236519.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|423257426|ref|ZP_17238349.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T00C01]
gi|423265607|ref|ZP_17244610.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T12C05]
gi|423285706|ref|ZP_17264587.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 615]
gi|60493162|emb|CAH07943.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis NCTC 9343]
gi|251945752|gb|EES86159.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5]
gi|301163271|emb|CBW22821.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis 638R]
gi|387777794|gb|EIK39890.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T00C01]
gi|392651235|gb|EIY44900.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|392654152|gb|EIY47801.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|392703265|gb|EIY96409.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T12C05]
gi|404578757|gb|EKA83476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 615]
Length = 296
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 154/324 (47%), Gaps = 42/324 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G + YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNR 231
K+LP +Q + + L GE + D+ R P +V D V K++ N
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTANG 221
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ ++ G + ++ ++A VA+ SLI+PV+ + P +
Sbjct: 222 ----------IYHICGSECLTIAEIAYRVADFLKLDRSLIEPVTTEEMKEVTPRPRFSGL 271
Query: 292 DITKLVQTLNIDPVTYKDGVKLTL 315
I K + P T ++G++ +L
Sbjct: 272 SIEKAKAEIGYTPRTLEEGMEASL 295
>gi|288932726|ref|YP_003436786.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642]
gi|288894974|gb|ADC66511.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642]
Length = 290
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 37/313 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G LG L + E K Y+V + ++S P+ P F DL +
Sbjct: 2 RIFITGGSGLLGSKLAEIALE---KGYEVYSGYNSHK-PEF---GKPVKF-----DLANS 49
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
D+V A+ +PDV+V+ AAL+ CE + D A INV + + ++
Sbjct: 50 ---DSVVRAISEVKPDVIVHSAALTDVDRCEVEKDLAYKINVEGTKI--VAEMARKVGAY 104
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
++++STD V++G + YKEEDE P+N YG +K+ EK+ C +F I R+ +IYG +
Sbjct: 105 MVYISTDYVFDGERGMYKEEDETHPINYYGYTKLLGEKY----CRDFCIARTCVIYGAK- 159
Query: 183 ISPVPKSLPIQ---WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P S + W+ + L GE V+ D+ P ++ K++ R ++
Sbjct: 160 ----PASGKVNFALWLINKLENGESVKIVTDQFITPTLNTNLAKMVFECAER------KL 209
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + ++ G RVSR + A+ +A + G SLI P ++ + P D S+D +K
Sbjct: 210 KGVFHLAGATRVSRFEFAKEIARVFGLDDSLITPSRMDEINWIAKRPRDSSLDTSKARNL 269
Query: 300 LNIDPVTYKDGVK 312
L+ P + +K
Sbjct: 270 LDEKPYELRKALK 282
>gi|359463701|ref|ZP_09252264.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris sp. CCMEE 5410]
Length = 300
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 158/310 (50%), Gaps = 30/310 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q +++ + + A +H + +P VDL+
Sbjct: 12 KLLITGASGFLGWYLCQ-VAQSRWQVFGTAYSH-AVEIP---------GCSMVTVDLRDF 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW-LSSFTENKENLL 123
+ V L+ QPD V++ AA + P VC+ +P S +INV +S W L+ + L
Sbjct: 61 ASLKQV-LQTVQPDAVIHAAAQARPHVCQAEPQSTHAINVEAS---WTLADLCGESQIPL 116
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +STD V++G Y+E D ++P+N YG+ KV AE+ + E+ + I R +++G +
Sbjct: 117 LFVSTDLVFDGQDPPYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFG---V 173
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
+P S IQ + L G ++ F DE R PV D + I+LAL +
Sbjct: 174 TPHAASF-IQPMIQNLEAGIALQLFEDEFRTPVSGLDAARSILLALAKG--------EGY 224
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+++GG +R+SR +M + + + GY SL+ S V PAD+S+D + L +L
Sbjct: 225 IHLGGKERLSRYEMGQQLVDCLGYPPSLLSGCSQIDVSLSTPRPADVSLD-SSLAYSLGY 283
Query: 303 DPVTYKDGVK 312
+P + ++
Sbjct: 284 EPKVFGQALR 293
>gi|265763752|ref|ZP_06092320.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16]
gi|263256360|gb|EEZ27706.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16]
Length = 296
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 153/324 (47%), Gaps = 42/324 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGVNGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRD----VVKIILALTNR 231
K+LP +Q + + L GE + D+ R P +V D V K++ N
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTANG 221
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ ++ G + ++ ++A VA+ SLI+PV+ + P +
Sbjct: 222 ----------IYHICGSECLTIAEIAYRVADFLKLDRSLIEPVTTEEMKEATPRPRFSGL 271
Query: 292 DITKLVQTLNIDPVTYKDGVKLTL 315
I K + P T ++G++ +L
Sbjct: 272 SIEKAKAEIGYTPRTLEEGMEASL 295
>gi|158337932|ref|YP_001519108.1| RmlD substrate binding domain-containing protein [Acaryochloris
marina MBIC11017]
gi|158308173|gb|ABW29790.1| RmlD substrate binding domain [Acaryochloris marina MBIC11017]
Length = 299
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 158/314 (50%), Gaps = 30/314 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q + + V T +S + +P V VDL+
Sbjct: 12 KLLITGASGFLGWYLCQ----VAQSSWQVFGTAYSHAV------EIPGCSVV-TVDLRDF 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW-LSSFTENKENLL 123
+ V L+ QPD V++ AA + P VC+ +P S +INV +S W L+ + L
Sbjct: 61 ASLKQV-LQTVQPDAVIHAAAQARPHVCQAEPQSTHAINVEAS---WTLADLCGESQIPL 116
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +STD V++G Y+E D ++P+N YG+ KV AE+ + E+ + I R +++G +
Sbjct: 117 LFVSTDLVFDGQDPPYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFG---V 173
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
+P S IQ + L G ++ F DE R PV D + I+LAL +
Sbjct: 174 TPHAASF-IQPMIQNLEAGIALQLFEDEFRTPVSGLDAARGILLALAKG--------EGY 224
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+++GG +R+SR +M + + + GY +L+ S + V PAD+S+D + L +L
Sbjct: 225 IHLGGKERLSRFEMGQQLVDCLGYPPTLLTGCSQTDVSLSTPRPADVSLD-SSLAYSLGY 283
Query: 303 DPVTYKDGVKLTLA 316
P + ++ L
Sbjct: 284 APNLFGQALRQMLG 297
>gi|427382618|ref|ZP_18879338.1| dTDP-4-dehydrorhamnose reductase [Bacteroides oleiciplenus YIT
12058]
gi|425729863|gb|EKU92714.1| dTDP-4-dehydrorhamnose reductase [Bacteroides oleiciplenus YIT
12058]
Length = 299
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 146/316 (46%), Gaps = 23/316 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK++LV+G G+ G+ +L LS Y V L D P S + F D
Sbjct: 2 KKKILVIGANGFTGRRVLNDLSC--NDEYIVTGC-------SLHDDIAPGSGNYHFISAD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G A + +P+VV+N +ALSVP CE + A SIN+ + V + E
Sbjct: 53 V-CQMGEQAALFREVRPNVVINASALSVPDYCETHHEEAESINITA--VGQFAFRCEVSG 109
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
IHLSTD V+ G YKE D APVN YG +K+ E+ + E CSN+AI+R +++YG
Sbjct: 110 ARFIHLSTDFVFSGDSGQLYKEVDTPAPVNYYGVTKLKGEQRVAELCSNYAIMRIAVVYG 169
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P +Q + L E+++ D+ R P YV DV + I L
Sbjct: 170 ATL--PGQHGNVLQLVADRLRNNEEIKVVSDQWRTPTYVGDVSQGIEKLIQH------SN 221
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + ++ +A VA+ SLI PV+ ++ P + I K
Sbjct: 222 NGIYHICGSECLTIADIAYRVADTLNLDYSLILPVTTKQMEETTPRPRFSGLSIEKARTE 281
Query: 300 LNIDPVTYKDGVKLTL 315
L P T ++G+KL
Sbjct: 282 LGYQPHTLEEGIKLMF 297
>gi|189465900|ref|ZP_03014685.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM
17393]
gi|189434164|gb|EDV03149.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides intestinalis
DSM 17393]
Length = 301
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 146/317 (46%), Gaps = 23/317 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK++LV+G G+ G+ +L LS Y V L D P S + F D
Sbjct: 4 KKKILVIGANGFTGRRILNDLSR--NDEYIVTGC-------SLHDDIAPGSGNYRFISAD 54
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G + + +P+VV+N +ALSVP CE + A SINV + V L+ E
Sbjct: 55 I-CQMGEQSALFREVRPNVVINTSALSVPDYCEAHHEEADSINVNA--VGQLAFRCEASA 111
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V+ G Y E D PVN YG +K+ EK E CSN+AI R +++YG
Sbjct: 112 ARLIHLSTDFVFNGDTTQLYTEVDTPDPVNYYGVTKLKGEKRAAELCSNYAIARVAVVYG 171
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P +Q + L E++ D+ R YV DV + I L N
Sbjct: 172 AAL--PGQHGNVLQLVADRLRNNEEIRVVSDQWRTATYVGDVSQGIEKLIN------YPN 223
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + ++ +A VA+I SLI PV+ ++ P + I K +
Sbjct: 224 NGIFHICGSECLTIADIAYHVADILNLDYSLILPVTTKQMEEATPRPRFSGLSIEKARRE 283
Query: 300 LNIDPVTYKDGVKLTLA 316
L P T ++G++L +
Sbjct: 284 LGYQPHTLEEGIRLMFS 300
>gi|407465567|ref|YP_006776449.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus sp.
AR2]
gi|407048755|gb|AFS83507.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus sp.
AR2]
Length = 296
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 25/311 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K R +V G G +G +++ LSE+ ++V + +H++ P + ++DL
Sbjct: 6 KMRFIVTGSAGLVGSQIVKDLSELN---HEVFSCYHNSK---------PDNGTLVNLDLT 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K PD +++ AA++ CE PD AM IN ++ + L+ ++
Sbjct: 54 NQNEIIDTITKIN-PDSIIHLAAMTGVDQCEEQPDLAMKINADATEI--LARQAAKQKAF 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G KE D P+ YGKSK+A E + + S +AI R+S +G
Sbjct: 111 FVYVSTDYVFDGKTGMKKESDTPNPLGYYGKSKLAGELTLNKLASPYAIARTSTPFG--- 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ KS PI W+ L + + D+ P +V ++ K+++ + KQ+ +
Sbjct: 168 LHKTKKSFPI-WVKESLESNKDIPVLVDQITSPTFVPNLSKMLIEIAT------KQIVGI 220
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +SR +AE++AE +KP S S + Q P D S+D++ + LN
Sbjct: 221 FHTAGASSISRYNLAEMIAEKLNLDKKYLKPASMSEMSWKAQRPKDSSLDVSLASELLNE 280
Query: 303 DPVTYKDGVKL 313
P T + + +
Sbjct: 281 KPQTIQQSLDI 291
>gi|227536063|ref|ZP_03966112.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243960|gb|EEI93975.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 308
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 18/313 (5%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK VL+ G G+LGQ L LS Y+V AT D + F +D
Sbjct: 1 MSKSTVLITGSNGFLGQKLTDLLSA--DSRYEVIATSKGENRNPNQAD-----YTFRQLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + L+ +P +++ AAL+ CE P+ +N+ +V L +
Sbjct: 54 ILDTESLNNI-LQHYKPASIIHTAALTSVEACEEQPELCQRLNI--DVVAQLGRYAALNN 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ L+HLSTD V++G YKE+D P++ YG+SKV +E + +A+LR+ ++YG
Sbjct: 111 SYLVHLSTDFVFDGKNGPYKEDDPTNPLSAYGRSKVDSENALALTQCKYAVLRTILVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
I+ +S + W LSK E ++ +D+ R P +V D+ + + +KQ
Sbjct: 170 -IIADEKRSNLVLWAKDKLSKQEAIKVVNDQWRMPTFVDDLARACKSAI------EKQQT 222
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ ++ G + +S + +A+ + + I +SA+++ + P D++K + L
Sbjct: 223 GIFHISGEEMMSIAEAVYTIADFWNFDRTYISEISAATIGQTENRPCKTGFDLSKAKRLL 282
Query: 301 NIDPVTYKDGVKL 313
+ P ++ + L
Sbjct: 283 DYQPTPFRKSLHL 295
>gi|75909858|ref|YP_324154.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75703583|gb|ABA23259.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413]
Length = 294
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 37/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLL----LDALPHSFVFFD 58
K++L+ G +G+LG HL Q + E + Y +H S P +LL D L +F +
Sbjct: 2 KKLLITGASGFLGWHLCQAAQQ-EWEVYGTYCSHELSVPGIKLLKVNLTDFLELKQIFNE 60
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ +PD V++ AA S P C+ PD + +INV +S L+
Sbjct: 61 I----------------KPDAVIHTAAQSQPNFCQIHPDESYTINVTASCN--LAELCAA 102
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
S++ V++G+KS YKE D + PVN+YG+ KV AE I E+ + R +++
Sbjct: 103 ASIPYAFTSSELVFDGIKSPYKETDTVCPVNIYGEQKVLAEVGILERYPIATVCRMPLMF 162
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDK 237
G T P KS IQ L G+++ F DE R PV K I+LAL +
Sbjct: 163 GNAT--PTAKSF-IQPFIQTLKSGQELTLFIDEFRTPVSGTTAAKGILLAL--------E 211
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+++ ++++GG +R+SR ++AE+ T+ IK V+ PAD+S+D ++
Sbjct: 212 KVKGIIHLGGKERISRYDFGHILAEVFQLPTAGIKACLQQDVNMAAPRPADVSLDSSQAF 271
Query: 298 QTLNIDPVTYKDGVKLTL 315
L P++ K ++ L
Sbjct: 272 -ALGYQPLSIKSELEALL 288
>gi|312129515|ref|YP_003996855.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM
17132]
gi|311906061|gb|ADQ16502.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM
17132]
Length = 296
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 150/309 (48%), Gaps = 20/309 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L+Q L+ GK +A LP L + + +D+
Sbjct: 2 KILITGSNGLLGQKLVQQLA---GKGDIIATARGENRLP------LSDGYRYRSLDITDP 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+AV ++ PD +++ AA++ CE D + +NV ++ +L E + +
Sbjct: 53 EAVNAVIIE-ETPDAIIHTAAMTNVDQCETDKEECWKLNVHAT--EYLVKAAEKTGSYFL 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD +++G + Y E+ E P++ YG SK AAEK + N++I R+ ++YG
Sbjct: 110 HVSTDFIFDGKEGPYAEDAEPNPISFYGWSKFAAEKVVQSSSLNWSIARTVLVYG--IAH 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S I W+ L G+ ++ +D+ R P D+ + + +K+ Q + N
Sbjct: 168 DMSRSNIILWVKGSLEAGKTIKVVNDQWRTPTLAEDLAAGCILMV------EKKAQGIYN 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ G D ++ QMA + A+ G +LI+ V+ + + + P + K ++ L P
Sbjct: 222 ISGKDLLNPYQMAVMTADYFGLDKNLIQEVNGTQFTQTARRPPKTGFILDKPIKDLGYSP 281
Query: 305 VTYKDGVKL 313
++ +G+ +
Sbjct: 282 RSFTEGIGI 290
>gi|333031141|ref|ZP_08459202.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
gi|332741738|gb|EGJ72220.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
Length = 299
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 30/312 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
KR+L+ G G+ G++LLQ ++ K Y++ AT +ST D P + + +DL
Sbjct: 5 KRILITGANGFTGRYLLQYF--MQQKTYELFATSNST-------DKYPTQGYEYQRLDLT 55
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A K QPDV+++ AA+S CE +P A S+NV + V + + +
Sbjct: 56 ESGNVIAYIQKI-QPDVIIHTAAISGIPQCEENPSQAYSVNVEA--VKTIGTVAKKLAIH 112
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I LSTD V++G + Y EED AP+N YGK+K+ AE++I + +++AI R +++YG
Sbjct: 113 FIQLSTDFVFDGKREIPYTEEDIPAPINEYGKTKLEAEQWIQKHLTHYAIARVAVVYGK- 171
Query: 182 TISPVPK----SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
PK + ++ I S LS E++ D+ R P YV D+ + I L +K
Sbjct: 172 -----PKDGQHTNIVEIIQSKLSNNEELHLVSDQWRTPTYVGDICQGIHLLI------EK 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + + ++ G + S ++ +A++ G + LI P ++S + P ++ K
Sbjct: 221 EEKGIFHICGSELFSIYELGLYIAKLLGKDSCLIHPEISNSAFNAIPRPPFTALSNAKAK 280
Query: 298 QTLNIDPVTYKD 309
L + T D
Sbjct: 281 DILGYNTTTIYD 292
>gi|153806520|ref|ZP_01959188.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185]
gi|149131197|gb|EDM22403.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides caccae ATCC
43185]
Length = 305
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 34/318 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G G+ G+ LL+ LS K Y+V HS P L + F +VD++
Sbjct: 2 RNILIIGANGFTGRQLLKDLSA--HKQYNVTGCSLHSDIFPAL---ENTKKYRFIEVDIR 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + K PDVV+NC+ALSVP CE + A INV + V L+ + ++
Sbjct: 57 NEASVKEL-FKAICPDVVINCSALSVPDYCETHHEEAYLINVTA--VEQLAHLCKEYQSR 113
Query: 123 LIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
IHLSTD V++G Y EE APVN YG +K E+ + + CSN+AI R I+
Sbjct: 114 FIHLSTDFVFDGKINERTGQLYTEEILPAPVNYYGFTKWKGEEKVADICSNYAIARVEIV 173
Query: 178 YGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
YG K+LP +Q + + L G+++ D+ R P +V D+ I L
Sbjct: 174 YG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTFVGDLSDGIQRLI-- 223
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ + ++ G + ++ ++A VA+ + +LI V+ + P M
Sbjct: 224 ----ENTANGIFHICGDECLTIAEIAYQVADYMKLNRALIHSVTTEEMQESTPRPRFSGM 279
Query: 292 DITKLVQTLNIDPVTYKD 309
I K L +P K+
Sbjct: 280 SIEKARTILGYNPRKLKE 297
>gi|218438541|ref|YP_002376870.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
gi|218171269|gb|ACK70002.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
Length = 295
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 31/311 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G +G+LG +L Q I +++ T++S + ++ F VDL
Sbjct: 3 RVLITGASGFLGWNLCQ----IAQTSWEIYGTYYSHAIQSPNVN-------FLKVDL--- 48
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F+ + F P V++ AA S P C+ P+ + INV +SL ++ + +
Sbjct: 49 TDFNNLKQLFADVNPTGVIHLAAQSKPNFCQQYPEPSYLINVTTSLN--IAGLCADYDIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ STD V++G+ YKE D ++P++ YG+ KV AE+ + ++ I R +++G
Sbjct: 107 CVFTSTDLVFDGLNPPYKETDPVSPISYYGEQKVLAEQGMLQRYPKTVICRMPLMFG--F 164
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
SPV S IQ + L +G++++ F DE R PV K ++LAL ++ +
Sbjct: 165 PSPVADSF-IQSFLTTLQQGKELKLFIDEWRTPVSGSTAAKGLLLAL--------EKGER 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+L++GG +R+SR + ++AE+ T LIKP S V P D+S+D +K L
Sbjct: 216 ILHLGGKERISRYEFGGLMAEVLQLKTELIKPCSQKDVIMAAPRPTDVSLDSSKAF-ALG 274
Query: 302 IDPVTYKDGVK 312
+P++ ++ ++
Sbjct: 275 YEPLSLREELQ 285
>gi|408673089|ref|YP_006872837.1| dTDP-4-dehydrorhamnose reductase [Emticicia oligotrophica DSM
17448]
gi|387854713|gb|AFK02810.1| dTDP-4-dehydrorhamnose reductase [Emticicia oligotrophica DSM
17448]
Length = 300
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 154/311 (49%), Gaps = 20/311 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K++L+ G G LGQ L++ L + + + AT LP + + +D+
Sbjct: 2 KKILITGSNGLLGQKLVELL--LNNQDVQIIATARGENRLP------FHEGYEYHPMDIT 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ +V QP+V+++ AA++ CE++ + + NV S V +L ++
Sbjct: 54 NREQVLSVVESI-QPEVIIHTAAMTNVDQCESEKAACWAQNVSS--VEYLVEACAKTDSF 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+H+STD +++G YKEEDE P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 111 LLHISTDFIFDGTSGPYKEEDEANPISFYGWSKYAAEKLVIHSKIRWAIARTVLVYG--I 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ ++ I W+ L +G+ ++ D+ R P D+ K + K+ + +
Sbjct: 169 AHDMSRTNIILWVKKSLEEGKNIKVVTDQWRTPTLAEDLAKGCALIAT------KEAEGI 222
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N+ G D ++ +MA + A+ + SLI +++ + + P D+TK + L
Sbjct: 223 FNISGKDFLTPYEMAIMTADYFKLNKSLIAQADSTTFSQPAKRPPRTGFDLTKSREVLGY 282
Query: 303 DPVTYKDGVKL 313
+PV++ +G+++
Sbjct: 283 EPVSFMEGIEV 293
>gi|300772034|ref|ZP_07081904.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760337|gb|EFK57163.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 308
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 18/313 (5%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK VL+ G G+LGQ L LS Y V AT D + F +D
Sbjct: 1 MSKTTVLITGANGFLGQKLTDLLSA--DSRYKVIATSKGENRNPNKAD-----YTFRQLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ D + L+ +P +++ AAL+ CE P+ +N+ +V L +
Sbjct: 54 ILDTEALDNI-LQHYKPASIIHTAALTSVEACEEQPELCQRLNI--DVVAQLGRYAALNN 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ ++HLSTD V++G YKE+D P++ YG+SKV +E + +A+LR+ ++YG
Sbjct: 111 SYIVHLSTDFVFDGKNGPYKEDDPTNPLSAYGRSKVNSESALALTQCKYAVLRTILVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
I+ +S + W LSK E ++ +D+ R P +V D+ + + +KQ
Sbjct: 170 -IIADEKRSNLVLWAKDKLSKQEAIKVVNDQWRMPTFVDDLARACKSAI------EKQPT 222
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ ++ G + +S + +A+ + + I +SA+++ + P D++K + L
Sbjct: 223 GIFHISGEEMMSIAEAVYTIADFWNFDRTYISEISAATIGQTDNRPRKTGFDLSKAKRLL 282
Query: 301 NIDPVTYKDGVKL 313
+ P +++ + L
Sbjct: 283 DYRPTPFRESLHL 295
>gi|294507877|ref|YP_003571935.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
gi|294344205|emb|CBH24983.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
Length = 307
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M RVL+ G G LGQ L+ LS+ + YDV AT P+ + + DV
Sbjct: 1 MLFNRVLITGANGLLGQALVHRLSQ--NREYDVLATARDDA-PRFEDGSC--GYAPLDV- 54
Query: 61 LKSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D VA F PDVVVNCAA++ C+ A ++N + V L+
Sbjct: 55 ----TQPDDVAQIFEDFTPDVVVNCAAMTDVGRCDEHRSEAWAVN--ARAVKTLAKHCRT 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSII 177
L+ +STD V+ G + Y E+ PVN YG++K+A E + E +N+AI+R+ ++
Sbjct: 109 SGARLVQVSTDFVFNGKRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLL 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG T + +S + W+ LS+GE + D+ R P +V D+ I L +
Sbjct: 169 YG--TGRDLRRSNIVLWVADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLH------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + +V G D VS ++A VA+ G SL++PV +S + V+ P I K
Sbjct: 221 EATGIYHVSGADMVSVYELACAVAQEFGLDASLVEPVPSSFFEDAVERPPRTGFVIDKAR 280
Query: 298 QTLNIDPVTYKDGVK 312
L+ DP G++
Sbjct: 281 DELDYDPRPLDAGLR 295
>gi|198274918|ref|ZP_03207450.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135]
gi|198272365|gb|EDY96634.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides plebeius DSM
17135]
Length = 305
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 23/321 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K++L++G G+ G+HLL + + H P + A + F+ D+ +
Sbjct: 2 NKKILIIGANGFTGRHLLHAFAPKTDWQITGCSLH-----PDICPPACGYRFIQTDITHE 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ QPDVVV+ AA+S E A ++NV + V WL+ E
Sbjct: 57 EEVEKLMEEV---QPDVVVHTAAMSATDYAETHHAEAQAVNVEA--VRWLAQSCEKHHCR 111
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V+ G S Y E D +PVN YG++K +EK + C ++AI R ++YG
Sbjct: 112 LIHLSTDFVFGGDTSRLYTEADTPSPVNYYGRTKWESEKVVASLCRDYAIARIVVVYG-- 169
Query: 182 TISPVPKSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+P P + + + L +++ D+ R P YV DVV+ + L ++ +
Sbjct: 170 --APYPGQHGNIVSLVINRLQNHQEIRVADDQWRTPTYVGDVVQGVEKLI------EQPV 221
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + ++ MA A+ G SLI PV +++ P + I K +
Sbjct: 222 CGIYHICGGECMTVADMALRTADTLGLDRSLILPVHTAAMQEKTPRPRFSGLSIEKARRE 281
Query: 300 LNIDPVTYKDGVKLTLAAEAT 320
L P+T+++GV+ L +++
Sbjct: 282 LGYRPLTFEEGVRSMLQDDSS 302
>gi|374636183|ref|ZP_09707763.1| dTDP-4-dehydrorhamnose reductase [Methanotorris formicicus Mc-S-70]
gi|373559866|gb|EHP86147.1| dTDP-4-dehydrorhamnose reductase [Methanotorris formicicus Mc-S-70]
Length = 296
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 119/228 (52%), Gaps = 13/228 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + DSA IN + ++ + + L H+STD V++G
Sbjct: 63 NPDFVVNTAAMTNVDLCETERDSAYKINALGA--KYIGEACKEIDCYLCHISTDYVFDGE 120
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y EEDEI P+N YG +K EK + E + +I+R S+ P ISPV + W
Sbjct: 121 KGDYVEEDEINPINYYGYTKAEGEKLLNELDYDSMSIVRISV---PYCISPVKVNF-FMW 176
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L E + D+ P YV + + ++ + +K + LL+ GG ++VSR
Sbjct: 177 VLERLKNNEAINAVIDQWNTPTYVNEFIGGVVKIY------EKDIGGLLHFGGGEKVSRY 230
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ A VAE+ GY +LIKP+ ++ + + P D S++ K + L I
Sbjct: 231 EFALKVAEVYGYDKTLIKPIKSAELGWKAKRPRDTSLNSEKAKKILGI 278
>gi|255036982|ref|YP_003087603.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053]
gi|254949738|gb|ACT94438.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053]
Length = 300
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 152/315 (48%), Gaps = 22/315 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH--SFVFFD 58
M KK++L+ G G LGQ L+ L V+ H T + LP + + +
Sbjct: 1 MEKKKILITGSNGLLGQKLVALL---------VSKAHIETIATARGENRLPFQTGYRYVE 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+D+ D V L +P V+++ AA++ CE + D+ +NV ++ L +
Sbjct: 52 MDITDPESVDRV-LDVERPHVLIHTAAMTNVDQCEIEKDACWKLNVTATET--LVAACAK 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ L H+STD V++G Y+E+D PV+ YG SK AAEK + +AI R+ ++Y
Sbjct: 109 YKIFLEHVSTDFVFDGTSGPYREQDVPNPVSFYGWSKYAAEKAVMSSDIEWAIARTVLVY 168
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + +S I W+ L +G+ ++ D+ R P D LAL +L D++
Sbjct: 169 G--IAHDMSRSNIILWVKKSLEEGKAIKVVTDQFRTPTLAED-----LAL-GCFLIADQE 220
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + ++ G D ++ +MA AE G SLI P AS+ + + P +TK
Sbjct: 221 AKGIYHISGKDFLTPYEMALATAEYFGLDASLISPTDASAFTQPARRPPRTGFKLTKASN 280
Query: 299 TLNIDPVTYKDGVKL 313
L +P ++++G+ +
Sbjct: 281 VLGYEPHSFREGIAI 295
>gi|83643162|ref|YP_431597.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis
KCTC 2396]
gi|83631205|gb|ABC27172.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis
KCTC 2396]
Length = 300
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 27/292 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV--D 60
K RVLV G +G+LG H+ + L++ Y+V A H LP+ D P F V D
Sbjct: 10 KPRVLVTGASGFLGAHICRALNQ----DYEVLAQSHQVTLPE---DLAP-----FRVRQD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L A+ + PD V++ AALS P C+ P+ ++ +NV ++ L++ ++
Sbjct: 58 LCDAELTQAM-FRNLTPDAVIHAAALSDPNTCQQQPERSLQVNVEAT--RLLAALCAERD 114
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y+E D + P+N YG+ K AEK I E+ I+R ++G
Sbjct: 115 IPLLFTSTDLVFDGRQGVYRESDPVNPINRYGEHKAMAEKLIREQHPRATIVRMPWMFGL 174
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ P S QW++ L +GE + F DE R V + I+ Q
Sbjct: 175 GLLKP---SGVTQWLER-LRQGETLTGFVDEYRSAVDYATAAQGIVRFFQ------MQQG 224
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
L L++GG + VSR + +A G L++ V + P D+S+D
Sbjct: 225 LTLHLGGIETVSRHHFLKALARTFGLDEDLVQEQKQRDVIMPAKRPRDVSLD 276
>gi|427736886|ref|YP_007056430.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
gi|427371927|gb|AFY55883.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
Length = 311
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 28/294 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG HL E+ + +DV T+ S L D V D+
Sbjct: 22 KKLLITGSSGFLGWHL----CELAKQKWDVYGTYFSHNL-----DIEGTKLVKLDL---- 68
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F QP V++ AA S P C+ P+ ++SINV +SL ++ +
Sbjct: 69 -TDFSELKKLFQEIQPSAVIHTAAQSQPNFCQTHPEESLSINVTASLN--IAGLCADNSI 125
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STD V++G+K FYKE D + PVN+YG+ KV AE + ++ AI R +++G
Sbjct: 126 PCVFTSTDLVFDGLKGFYKETDSVNPVNIYGEHKVIAENGMLKRYPQTAICRMPLMFGGA 185
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T P S +Q L +G++++ F DE R PV + + +L L+ DK +
Sbjct: 186 T--PTATSF-LQSFLKTLQEGKELKLFVDEFRTPVSGKTAAEGLL------LALDKGIG- 235
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
++++GG +R+SR ++ EI ++ I V +D+S+D +K
Sbjct: 236 IIHLGGKERISRYDFGRLLVEIFDIPSAKITASLQKDVKMAAPRASDVSLDSSK 289
>gi|374374554|ref|ZP_09632213.1| dTDP-4-dehydrorhamnose reductase [Niabella soli DSM 19437]
gi|373233996|gb|EHP53790.1| dTDP-4-dehydrorhamnose reductase [Niabella soli DSM 19437]
Length = 295
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 159/316 (50%), Gaps = 27/316 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G +G ++++ L E Y+V A+ + L + + F +D
Sbjct: 2 KVLVTGANGLVGSYVIKQLLE---AGYEVYASSKNADLSSFAGE----RYHFRQMDFIDP 54
Query: 65 SG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
F+++ +P+VVV+ A+S P CE + A NV ++ L++ + +
Sbjct: 55 YAVLEVFESI-----RPEVVVHSGAMSKPDDCERNQADAYETNVAGTVQLLLNA--ADHK 107
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ I LSTD ++ G +KEED +P++ YG++K AE+ + E +++I+R+ +YG
Sbjct: 108 SFFIFLSTDFIFNGETGMHKEEDATSPLSYYGRTKQEAEEAVREYGHDWSIVRTVFVYGK 167
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ + + L K E +D+ R P YV D+ K ++A+ +K+
Sbjct: 168 PLYG---RNCFLTMLAGKLRKNEPFRVVNDQERTPTYVADLAKGVIAII------EKRAT 218
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ ++ G D + QMA VA+ G + ++PVS++ ++ + P +DI+K L
Sbjct: 219 GIFHLSGSDVFTPYQMAMQVAKFMGIAQHRLEPVSSAELNELARRPLKSGLDISKARAVL 278
Query: 301 NIDPVTYKDGVKLTLA 316
+PV++++G++ TL
Sbjct: 279 GYEPVSFEEGLRKTLG 294
>gi|428208392|ref|YP_007092745.1| dTDP-4-dehydrorhamnose reductase [Chroococcidiopsis thermalis PCC
7203]
gi|428010313|gb|AFY88876.1| dTDP-4-dehydrorhamnose reductase [Chroococcidiopsis thermalis PCC
7203]
Length = 290
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 32/314 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++LV G +G+LG HL Q + + +DV +T+ H +P + + +DL
Sbjct: 2 KKLLVTGASGFLGWHLCQ----LAKQQWDVYSTYFSHEIEIPGVTM---------LKIDL 48
Query: 62 KSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F A+ F Q P ++ AA S P C+ + + +INV +SL ++ +
Sbjct: 49 RD---FQALKHLFQQIQPSATIHTAAQSSPNYCQTHAEESYAINVTTSLN--IAGLCADF 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I STD V++G+ + Y+E D ++PVN YG+ KV AE+ I + I R +++G
Sbjct: 104 GIPFIFTSTDLVFDGLNAPYRETDPVSPVNAYGEQKVQAEEGILARYPLATICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
T P S IQ L G+++ F DE R P K +L + +KQ+
Sbjct: 164 MAT--PTATSF-IQPFMQTLKDGKELALFTDEFRTPASGTTAAKGLLMVL------EKQV 214
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q ++++GG +R+SR ++ E+ + +K V PAD+S+D +K
Sbjct: 215 QGMIHLGGKERLSRYDFGRLLVEVFQLPATRLKSCRQQDVKMAAPRPADVSLDSSKAFH- 273
Query: 300 LNIDPVTYKDGVKL 313
L P++ ++ +++
Sbjct: 274 LGYQPLSVREELEM 287
>gi|29346135|ref|NP_809638.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|383122397|ref|ZP_09943090.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
gi|29338029|gb|AAO75832.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842514|gb|EES70594.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
Length = 302
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 40/320 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K ++++G G+ G+ +L LS Y V L D LP + + F D
Sbjct: 2 KNIIIIGANGFTGRQILNDLSS--KAQYKVTGC-------SLHPDILPKNGGNYHFITTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E+ +
Sbjct: 53 IRDEAVVKQL-FKDVQPDVVINCSALSVPDYCETHHEEAWLTNVTA--VEQLAHLCESYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+ APVN YG +K E+ + E CSN+AI R
Sbjct: 110 SRFIHLSTDFVFDGKIDEKSGQLYTEKSLPAPVNYYGFTKWKGEEKVTEICSNYAIARVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV + L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDVSAGVQHLV 221
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ G + ++ ++A VA+ SL+ P + + P
Sbjct: 222 ------ENAANGIFHICGEECLTIAEIAFQVADYMKLDRSLVHPATTEEMQEATPRPRFS 275
Query: 290 SMDITKLVQTLNIDPVTYKD 309
M I K L P KD
Sbjct: 276 GMSIAKARTILGYQPRKLKD 295
>gi|83816254|ref|YP_445966.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855]
gi|83757648|gb|ABC45761.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855]
Length = 307
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M RVL+ G G LGQ L+ LS+ + YDV AT P+ + + DV
Sbjct: 1 MLFNRVLITGANGLLGQALVHRLSQ--NREYDVLATARDDA-PRFEDGSC--GYAPLDV- 54
Query: 61 LKSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D VA F P+VVVNCAA++ C+ A ++N + V L+
Sbjct: 55 ----TQPDDVAQIFEDFTPNVVVNCAAMTDVGRCDEHRSEAWAVN--ARAVKTLAKHCRT 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSII 177
L+ +STD V+ G + Y E+ PVN YG++K+A E + E +N+AI+R+ ++
Sbjct: 109 SGARLVQVSTDFVFNGKRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLL 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG T + +S + W+ LS+GE + D+ R P +V D+ I L +
Sbjct: 169 YG--TGRDLRRSNIVLWVADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLH------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + +V G D VS ++A VA+ G SL++PV +S + V+ P I K
Sbjct: 221 EATGIYHVSGADMVSVYELAGAVAQEFGLDASLVEPVPSSFFEDAVERPPRTGFVIDKAR 280
Query: 298 QTLNIDPVTYKDGVK 312
L+ DP G++
Sbjct: 281 DELDYDPRPLDAGLR 295
>gi|406035354|ref|NP_001013492.2| methionine adenosyltransferase 2 subunit beta [Danio rerio]
Length = 323
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + +D ++ P F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFKNNDWDALGCGYNRARP-----------FFLKCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F QP V+V+CAA P V E ++AM++NV + + E + L
Sbjct: 64 EDAVRGVIQRF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACA----TLAKEAGGSFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E D P+N+YGKSK+ E+ I C AILR I++G +
Sbjct: 119 IYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAILRVPILFG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + V E H + R P Y DV ++ + R L +D+ ++ +
Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-QDQSLRGIF 235
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
+ +++++ +M +A+ +S + P++ G Q P + ++ ++L + L++
Sbjct: 236 HYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSV 295
Query: 303 DPVTYKDGVKLTL 315
+ +K+ ++ +L
Sbjct: 296 ESTPFKNAIRDSL 308
>gi|301782821|ref|XP_002926826.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Ailuropoda melanoleuca]
Length = 334
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 29 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 85
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 86 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 130
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 131 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 188
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 189 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 247
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +TL I
Sbjct: 248 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ETLGI 305
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 306 GQRTPFRIGIKESL 319
>gi|403287074|ref|XP_003934782.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Saimiri
boliviensis boliviensis]
Length = 334
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPKNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|281341458|gb|EFB17042.1| hypothetical protein PANDA_016526 [Ailuropoda melanoleuca]
Length = 313
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 8 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 65 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 110 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 168 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 226
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +TL I
Sbjct: 227 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ETLGI 284
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 285 GQRTPFRIGIKESL 298
>gi|301782819|ref|XP_002926825.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Ailuropoda melanoleuca]
Length = 323
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 18 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 74
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 75 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 120 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 178 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 236
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +TL I
Sbjct: 237 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ETLGI 294
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 295 GQRTPFRIGIKESL 308
>gi|119581924|gb|EAW61520.1| methionine adenosyltransferase II, beta, isoform CRA_d [Homo
sapiens]
Length = 333
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 28 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 73
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 74 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 130
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 131 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 188
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 189 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 247
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 248 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 305
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 306 QRTPFRIGIKESL 318
>gi|117645018|emb|CAL37975.1| hypothetical protein [synthetic construct]
gi|261859642|dbj|BAI46343.1| methionine adenosyltransferase II, beta [synthetic construct]
Length = 334
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQCPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|332238967|ref|XP_003268676.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Nomascus leucogenys]
Length = 334
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|333910067|ref|YP_004483800.1| dTDP-4-dehydrorhamnose reductase [Methanotorris igneus Kol 5]
gi|333750656|gb|AEF95735.1| dTDP-4-dehydrorhamnose reductase [Methanotorris igneus Kol 5]
Length = 296
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + D A IN V ++ + L H+STD V++G
Sbjct: 63 NPDFVVNTAAMTNVDLCETEKDLAYKINALG--VKYIGEICKEITCSLCHISTDYVFDGE 120
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
K Y EEDEI P+N YG +K E+ + E + +I+R S+ P ISPV + W
Sbjct: 121 KGNYVEEDEINPINYYGYTKAEGERLLRELDYDLISIVRISV---PYCISPVKTNF-FMW 176
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L E V D+ P YV ++V+ I+ + + LL+ GG ++VSR
Sbjct: 177 VLEKLRNNEVVNAVIDQWNTPTYVNELVEGIVKIY------ENDFNGLLHFGGGEKVSRY 230
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ A VAEI G+ SLIKP +S + + P D S++ K+ + L I+
Sbjct: 231 EFALKVAEIFGFDKSLIKPTKSSKLGWKAKRPKDTSLNSKKVEKLLKIE 279
>gi|62901974|gb|AAY18938.1| DKFZp564B246 [synthetic construct]
Length = 358
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 53 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 98
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 99 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 155
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 156 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 213
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 214 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 272
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 273 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 330
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 331 QRTPFRIGIKESL 343
>gi|11034825|ref|NP_037415.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Homo
sapiens]
gi|383873001|ref|NP_001244402.1| methionine adenosyltransferase 2 subunit beta [Macaca mulatta]
gi|296192700|ref|XP_002744186.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Callithrix jacchus]
gi|397479289|ref|XP_003810957.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Pan paniscus]
gi|74719662|sp|Q9NZL9.1|MAT2B_HUMAN RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta; AltName: Full=Putative
dTDP-4-keto-6-deoxy-D-glucose 4-reductase
gi|75040945|sp|Q5R4E0.1|MAT2B_PONAB RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|6815285|gb|AAF28477.1| methionine adenosyltransferase regulatory beta subunit [Homo
sapiens]
gi|12052852|emb|CAB66599.1| hypothetical protein [Homo sapiens]
gi|55733390|emb|CAH93376.1| hypothetical protein [Pongo abelii]
gi|117646290|emb|CAL38612.1| hypothetical protein [synthetic construct]
gi|119581921|gb|EAW61517.1| methionine adenosyltransferase II, beta, isoform CRA_a [Homo
sapiens]
gi|189065444|dbj|BAG35283.1| unnamed protein product [Homo sapiens]
gi|343958844|dbj|BAK63277.1| methionine adenosyltransferase II, beta isoform 2 [Pan troglodytes]
gi|380811856|gb|AFE77803.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Macaca
mulatta]
gi|384942776|gb|AFI34993.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Macaca
mulatta]
gi|410214886|gb|JAA04662.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410255314|gb|JAA15624.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291404|gb|JAA24302.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291408|gb|JAA24304.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410335781|gb|JAA36837.1| methionine adenosyltransferase II, beta [Pan troglodytes]
Length = 334
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|13528837|gb|AAH05218.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 323
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNTQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|330689348|pdb|2YDX|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689349|pdb|2YDX|B Chain B, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689350|pdb|2YDX|C Chain C, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689351|pdb|2YDX|D Chain D, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689352|pdb|2YDX|E Chain E, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
Length = 315
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 3 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 49 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 164 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 223 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 280
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 281 QRTPFRIGIKESL 293
>gi|332238969|ref|XP_003268677.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Nomascus leucogenys]
Length = 323
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|197102462|ref|NP_001126137.1| methionine adenosyltransferase 2 subunit beta [Pongo abelii]
gi|55730484|emb|CAH91964.1| hypothetical protein [Pongo abelii]
Length = 323
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|426350908|ref|XP_004043005.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Gorilla gorilla gorilla]
Length = 334
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|33519455|ref|NP_877725.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Homo
sapiens]
gi|350537901|ref|NP_001233495.1| methionine adenosyltransferase 2 subunit beta [Pan troglodytes]
gi|296192702|ref|XP_002744187.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Callithrix jacchus]
gi|397479291|ref|XP_003810958.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Pan paniscus]
gi|6006498|emb|CAB56837.1| dTDP-4-keto-6-deoxy-D-glucose 4-reductase [Homo sapiens]
gi|37182512|gb|AAQ89058.1| MAT2B [Homo sapiens]
gi|119581922|gb|EAW61518.1| methionine adenosyltransferase II, beta, isoform CRA_b [Homo
sapiens]
gi|343962313|dbj|BAK62744.1| methionine adenosyltransferase II, beta isoform 2 [Pan troglodytes]
gi|380811854|gb|AFE77802.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|383413005|gb|AFH29716.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|384942778|gb|AFI34994.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|410214884|gb|JAA04661.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410255312|gb|JAA15623.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291406|gb|JAA24303.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410335779|gb|JAA36836.1| methionine adenosyltransferase II, beta [Pan troglodytes]
Length = 323
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|348574895|ref|XP_003473225.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Cavia porcellus]
Length = 323
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|348574893|ref|XP_003473224.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Cavia porcellus]
Length = 334
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|426350910|ref|XP_004043006.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Gorilla gorilla gorilla]
Length = 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|351700434|gb|EHB03353.1| Methionine adenosyltransferase 2 subunit beta [Heterocephalus
glaber]
Length = 334
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHATGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|220907960|ref|YP_002483271.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
gi|219864571|gb|ACL44910.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
Length = 292
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 26/291 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-ATHHSTPLPQLLLDALPHSFVFFDVDL 61
KK++LV G +G+LG +L Q +++ + + Y A + P F +DL
Sbjct: 2 KKKLLVTGASGFLGWNLCQ-MAQADWQVYGTGFAKNIQIP-----------GVHFRHIDL 49
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
++ L QPD V++ AA S P C+ +P + INV +S L+S +
Sbjct: 50 RNFVELKQFLLDI-QPDGVIHTAAQSNPNYCQLNPQESYEINVRTS--GDLASLCAEMDI 106
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+ STD V++G S Y+E D + P++VYG+ KVAAE+ I + R +++G
Sbjct: 107 PLVFTSTDLVFDGQHSPYRETDPVCPLSVYGEHKVAAERLIQNAHPGAVLARMPLMFG-- 164
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
++ +S IQ +L G++++ F DE R PV + +L + KQ +
Sbjct: 165 -VAASAQSF-IQPFVKILRSGQELKLFVDEFRTPVSAETAARGLLLILQ------KQFKG 216
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+L++GG +R+SR Q + + E+ +L+KP + V P D+ +D
Sbjct: 217 ILHLGGQERLSRYQFGQQMVEVLQLDPTLLKPCHQADVPMAAPRPRDVCLD 267
>gi|158257270|dbj|BAF84608.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWRQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|291387772|ref|XP_002710405.1| PREDICTED: methionine adenosyltransferase II, beta isoform 1
[Oryctolagus cuniculus]
Length = 334
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SDAVHHIIHEF-QPHVIVHCAAERRPDVVENQPDAASQLNVNAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|404451293|ref|ZP_11016262.1| dTDP-4-dehydrorhamnose reductase [Indibacter alkaliphilus LW1]
gi|403763047|gb|EJZ24047.1| dTDP-4-dehydrorhamnose reductase [Indibacter alkaliphilus LW1]
Length = 305
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 154/309 (49%), Gaps = 18/309 (5%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K+VL+ G G LGQ L++ L + K ++ AT + LP+ + ++ DV K
Sbjct: 2 KKVLITGSNGLLGQKLIKKLKD--NKAIELFATGRGESRLPESWQG--DYEWISLDVCDK 57
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + +A K PD V++ AA++ CE D ++ NV +++ N + + +N+ +L
Sbjct: 58 SAV-LELIAKKI--PDCVIHTAAMTQVDDCEADQNACWESNV-TAVRNLIEACEKNQVHL 113
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD +++G Y E PVN YG++K+AAE+ I +AI R+ ++YG
Sbjct: 114 -IHLSTDFIFDGKDGPYDESASANPVNYYGETKLAAEELIKASKCKWAIARTVLVYG--V 170
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S I W+ + L + +K+ D+ R P D+ + + L +K + +
Sbjct: 171 AADMSRSNIILWVKNSLEQRKKINVVTDQWRTPTLAEDLAEGCILLM------EKGSEGI 224
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N+ G D ++ MA AE G S+IK +S+ + + P I K + L
Sbjct: 225 FNISGEDFLTPYDMAMQTAEYFGLDKSMIKKADSSNFSQPAKRPMKTGFVIDKAKRELGY 284
Query: 303 DPVTYKDGV 311
P ++ DG+
Sbjct: 285 SPKSFMDGI 293
>gi|345799407|ref|XP_536439.3| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Canis lupus familiaris]
Length = 323
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 25/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 15 LPNRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 74
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 116
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 117 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 176
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 177 --EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 233
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +T
Sbjct: 234 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ET 291
Query: 300 LNIDPVT-YKDGVKLTL 315
L I T ++ G+K +L
Sbjct: 292 LGIGQRTPFRIGIKESL 308
>gi|345799405|ref|XP_003434556.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Canis lupus familiaris]
Length = 334
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 25/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 26 LPNRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 85
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 127
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 128 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 188 --EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 244
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +T
Sbjct: 245 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ET 302
Query: 300 LNIDPVT-YKDGVKLTL 315
L I T ++ G+K +L
Sbjct: 303 LGIGQRTPFRIGIKESL 319
>gi|291387774|ref|XP_002710406.1| PREDICTED: methionine adenosyltransferase II, beta isoform 2
[Oryctolagus cuniculus]
Length = 323
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SDAVHHIIHEF-QPHVIVHCAAERRPDVVENQPDAASQLNVNAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|333986784|ref|YP_004519391.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. SWAN-1]
gi|333824928|gb|AEG17590.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. SWAN-1]
Length = 289
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 145/309 (46%), Gaps = 30/309 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+ + GG+G LG I G Y++ THH P + V FD+ ++
Sbjct: 2 KRLFITGGSGLLGSKF----KYIAGSKYEIVTTHHKNP---------GENSVLFDITDEN 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+L PD V++ AAL+ CE+ P A ++N + + ++ E + L
Sbjct: 49 DVMNKITSL---NPDAVIHAAALTNVDYCEDHPKEAWNVNAKGT--DNIAKACEKTGSKL 103
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGPQT 182
++STD V++G + Y EED+ P+ Y +K+ E+FI + N+AI R S++YG T
Sbjct: 104 TYVSTDFVFDGERGMYSEEDKTNPLGYYASTKLEGEEFIRQYDDLNYAIARVSVLYGWHT 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + W+ L G ++ D+ P + + ++ + +K +
Sbjct: 164 -----RMNFVTWVIDELKNGNEINIVTDQYNSPTLADNAAEAMIKIF------EKDKTGI 212
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +R++R A +AE+ +SLI P +++ + + P D S+++ K+ + L I
Sbjct: 213 YHTVGDERINRFDFARNIAEVFDLDSSLINPTKSTNFVQKAKRPKDSSLNVEKVQRDLGI 272
Query: 303 DPVTYKDGV 311
+ +G+
Sbjct: 273 KMLNTTEGL 281
>gi|218258294|ref|ZP_03474696.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii
DSM 18315]
gi|218225637|gb|EEC98287.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii
DSM 18315]
Length = 295
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 153/318 (48%), Gaps = 36/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G+ G+ +L LS G+ V + H P H+FV D++
Sbjct: 2 KKILVIGANGFAGRRILDKLSS-NGECEVVGCSLHPDIQP-----GEKHTFVRVDMN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV + F PDVV+NC+ALSVP CE + A +INV + V L+ E + +
Sbjct: 53 --DYPAVEVLFDHVCPDVVINCSALSVPDYCEQHREEAYAINVAA--VENLAHCCEQQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V++G Y EED AP+N YG +K E+ + C N+A+ R ++YG
Sbjct: 109 RFIHLSTDFVFDGKSDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
K+LP +Q + + L G+++ D+ R P +V D+ + L S
Sbjct: 168 -------KALPGQHGNILQLVKNRLEAGQEIRVVSDQYRTPTWVADIADGVEKLVYSGNS 220
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+ ++ G + +S +MA VA+ SLI PV+ + P + + I
Sbjct: 221 G------IYHICGGEYLSIAEMAYRVADYFKLDHSLICPVTTEEMKEATPRPRNSGLSID 274
Query: 295 KLVQTLNIDPVTYKDGVK 312
K L P T ++G++
Sbjct: 275 KAKLELGYRPHTLEEGLR 292
>gi|432098886|gb|ELK28381.1| Methionine adenosyltransferase 2 subunit beta [Myotis davidii]
Length = 316
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + P+ F V+L
Sbjct: 11 RRVLITGATGLLGRAVYK---EFHQNNWHAVGCGFRRARPK-----------FEHVNLLD 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 57 ANAVHHIIYDF-QPHVIVHCAAERRPDVVENQPDAAAQLNVDAS--GNLAKEAAAIGAFL 113
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 114 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 171
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 172 EKLEESSVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 230
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 231 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPKNSQLDCSKL-ETLGIG 288
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 289 QRTPFRIGIKESL 301
>gi|82178568|sp|Q5BJJ6.1|MAT2B_DANRE RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|60688479|gb|AAH91455.1| Zgc:110308 [Danio rerio]
Length = 323
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + +D ++ P F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFKNNDWDALGCGYNRARP-----------FFLKCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V F QP V+V+CAA P V E ++AM++NV + + E + L
Sbjct: 64 EDAVRGVIQSF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACA----TLAKEAGGSFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E D P+N+YGKSK+ E+ I C A+LR I++G +
Sbjct: 119 IYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + V E H + R P Y DV ++ + R L +D+ ++ +
Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-QDQSLRGIF 235
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
+ +++++ +M +A+ +S + P++ G Q P + ++ ++L + L++
Sbjct: 236 HYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSV 295
Query: 303 DPVTYKDGVKLTL 315
+ +K+ ++ +L
Sbjct: 296 ESTPFKNAIRDSL 308
>gi|440911435|gb|ELR61106.1| Methionine adenosyltransferase 2 subunit beta [Bos grunniens mutus]
Length = 334
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+ E
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAEAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAQRPRNAQLDCSRL-ETL 303
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|355701312|gb|AES01642.1| methionine adenosyltransferase II, beta [Mustela putorius furo]
Length = 312
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 8 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 65 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALIGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 110 LIYISSDYVFDGTDPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 168 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRVPTHVKDVATVCRQLAEKRML-DPSIKGT 226
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D TKL +TL I
Sbjct: 227 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCTKL-ETLGI 284
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 285 GQRTPFRIGIKESL 298
>gi|37522690|ref|NP_926067.1| methionine adenosyltransferase [Gloeobacter violaceus PCC 7421]
gi|35213692|dbj|BAC91062.1| glr3121 [Gloeobacter violaceus PCC 7421]
Length = 295
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 34/308 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT--HHSTPLP----QLLLDALPHSFVFF 57
KR+L+ G +G LG Q S ++V T H PLP QL
Sbjct: 3 KRLLITGASGLLG---FQVASRALQSGWEVVGTVSRHRCPLPIEQPQL------------ 47
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+ L+ S +A ++ +PD +V+CAA+S CE +P A+ +NV ++ L+
Sbjct: 48 DLALEDLSELEAFVGRY-RPDALVHCAAISEAAQCEANPTVALRVNVAAT--EALARTAG 104
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSI 176
+ +STD V++G ++ Y EE +P+ YG++K+AAE+ + E A ++R+S+
Sbjct: 105 RTGCRFVFVSTDLVFDGREAPYCEESLPSPLGCYGRTKMAAEQRVLELGDGGALVVRTSL 164
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+ GP SP + + + L+ G++ F DE R PVY D+ +L L S
Sbjct: 165 LLGP---SPSGARSVEERLGAQLAAGKRANLFTDEFRSPVYAPDLAAALLELVEAGQSG- 220
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
LL++GGP+R+SR + ++A G+ T LI S P D+S+D +
Sbjct: 221 -----LLHLGGPERLSRHALGILLAGHFGWDTRLILAASGRDYPSTPPRPTDVSLDSRRA 275
Query: 297 VQTLNIDP 304
L+ P
Sbjct: 276 YALLSSPP 283
>gi|307153579|ref|YP_003888963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
gi|306983807|gb|ADN15688.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
Length = 300
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 166/320 (51%), Gaps = 31/320 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG +L +I +D+ T+ + PL + +P VDL
Sbjct: 2 KKLLITGASGFLGGNL----GKIAASEWDIYGTYCAHPLTLKDVTLIP-------VDL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F ++ F + P V++ AA S P C+ P+ + INV +SL ++ +
Sbjct: 49 -TDFPSLKQLFAEVNPTAVIHTAAQSKPNFCQQYPEQSYRINVTASLN--IAGLCADYNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STD V+ G+ + YKE D ++P++ YG+ KV AE+ + + AI R +++G
Sbjct: 106 PCVFTSTDLVFNGLNAPYKETDPVSPISYYGEQKVLAEEGMRKIYPKTAICRMPLMFG-- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
SP +S WI S L++G+++ F DE R PV + ++LAL +++
Sbjct: 164 LSSPTAESFIQPWIKS-LNQGKEINLFIDEFRTPVSGSTAARGLLLAL--------EKVA 214
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+L++GG +++SR Q ++AE+ LIK + PAD+S+D ++ + L
Sbjct: 215 GILHLGGVEKISRYQFGLLMAEVLQLPIDLIKSCRQKDLSFAAPRPADVSLDSSQAL-AL 273
Query: 301 NIDPVTYKDGVKLTLAAEAT 320
+P++ ++ +++ +++T
Sbjct: 274 GYNPLSLREELEIFKNSQST 293
>gi|218664471|ref|NP_001136304.1| methionine adenosyltransferase 2 subunit beta [Sus scrofa]
gi|198448579|gb|ACH88506.1| methionine adenosyltransferase 2beta [Sus scrofa]
Length = 334
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIYDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y+EED +P+N YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISTDYVFDGKNPPYREEDMPSPLNPYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNPPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|172035069|ref|YP_001801570.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC
51142]
gi|354551923|ref|ZP_08971231.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
gi|171696523|gb|ACB49504.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC
51142]
gi|353555245|gb|EHC24633.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
Length = 292
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 30/309 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG ++ Q E + V T++ ++ +D + F VD+ +
Sbjct: 2 KKLLITGASGFLGYNVCQYAQE----NWQVYGTYYHN---RINIDRIN----CFKVDITN 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+N+P+ A INV +SL L+ +
Sbjct: 51 IQELHTVFNEI-KPDGVIHLAAASKPNYCQNNPEDAYQINVTASLN--LAKLCADGNIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ S Y+E D ++P++ YG+ KV AE+ + I R +++G
Sbjct: 108 VFTSTDLVFDGLNSPYQESDPVSPISYYGEQKVQAEQEMLAIYPKTVICRMPLMFG---- 163
Query: 184 SPVPKSLP---IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+P S IQ+ + +G+ + F DE R PV K +L L+ +K
Sbjct: 164 --IPSSHAASFIQFFLTTFREGKPLSLFTDEYRTPVSGLTAAKGLL------LALEKGEG 215
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++++GG +R+SR Q ++AE+ +S LI P S V D S+D +K Q L
Sbjct: 216 EIIHLGGKERISRYQFGHLMAEVFDFSQELITPCSQQDVPMAAPRSPDTSLDSSKAFQ-L 274
Query: 301 NIDPVTYKD 309
+P++ ++
Sbjct: 275 GYEPLSLRE 283
>gi|45219849|gb|AAH66645.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 334
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL + L I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-EILGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|355750400|gb|EHH54738.1| hypothetical protein EGM_15630 [Macaca fascicularis]
Length = 357
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 40/313 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + + H+
Sbjct: 69 RRVLVTGATGLLGRAVHKEFQQ---------NNWHAV----------------------- 96
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G GF KF QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 97 GCGFRRARPKFDQPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 154
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 155 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 212
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R +V++V + L + + D ++
Sbjct: 213 EKLEESAVTVMFDKVQFSNKSANMDHQQQRFLTHVKEVATVCRQLAEKRML-DPSIKGTF 271
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 272 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 329
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 330 QRTPFRIGIKESL 342
>gi|255533298|ref|YP_003093670.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366]
gi|255346282|gb|ACU05608.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366]
Length = 303
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 18/310 (5%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VLV G G LGQ + + L + + +A P + + + ++D+
Sbjct: 2 RTVLVTGSNGLLGQKITERLL-VTNQFGLIATAKGGNRFP------VTEGYTYAEMDILD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AV K+ QPD +++ AA++ CE + + A +NV + V L S E L
Sbjct: 55 PENVKAVVEKY-QPDAIIHTAAMTNVDTCEAEKELAYQLNVEA--VKTLVSLCELHNIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+HLSTD +++G Y E P++ YG +K+ AE+ I +AILR+ I+YG +
Sbjct: 112 VHLSTDFIFDGAHGPYDELAAPNPLSYYGITKLEAEEVIKSSTCRWAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + ++ + W + L KG + +D+ R P D+ L L+ +K + +
Sbjct: 170 SDMSRTNIVLWAKTALEKGSPINVVNDQWRMPTLAEDLADCCL------LAVEKDARGVY 223
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G D + ++ VA+ G + SLI +S+ S+++ + P + K + L
Sbjct: 224 NASGKDMMRISELVARVADYWGLNKSLITEISSESLNQAAKRPVKTGFILDKTINDLGYS 283
Query: 304 PVTYKDGVKL 313
P ++++G+ +
Sbjct: 284 PHSFEEGLAI 293
>gi|428307793|ref|YP_007144618.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
gi|428249328|gb|AFZ15108.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 156/311 (50%), Gaps = 27/311 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+LV G +G+LG +L Q + + +D+ T+ S L L ++ L VDL
Sbjct: 2 KRILVTGASGFLGWNLCQ----LAKQEWDIYGTYWSNYLDILGVNML-------KVDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + QP +++ AALS P C+N+P+ + INV +S ++ N
Sbjct: 51 LEELKRIFQEI-QPAGIIHTAALSSPNFCQNNPEISHKINVVASCN--IAELAANYAIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V+ G+ + YKE D ++PVN+YG+ KV AE + ++ A+ R +++G
Sbjct: 108 VFTSTDLVFNGLNAPYKETDLVSPVNLYGEQKVMAEVGMLQRYPLTAVCRMPLMFG--VA 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
SP S IQ L +G+++ F DE R PV + + ++LAL +++Q
Sbjct: 166 SPTANSF-IQPFIQGLREGKELSLFTDEFRTPVSGKTAAQGLLLAL--------EKVQGY 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+++GG +RVSR ++ E+ S + ++ V D+S+D TK L
Sbjct: 217 IHLGGKERVSRYDFGRLLVEVLQLSGAKLQTCLQKDVKMAAPRSPDVSLDSTKAF-NLGY 275
Query: 303 DPVTYKDGVKL 313
P++ ++ ++L
Sbjct: 276 QPLSIREELEL 286
>gi|410949348|ref|XP_003981385.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Felis catus]
Length = 323
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 25/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 15 LPSRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 74
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 116
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 117 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 176
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 177 --EVEKLDESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 233
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +T
Sbjct: 234 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ET 291
Query: 300 LNIDPVT-YKDGVKLTL 315
L I T ++ G+K +L
Sbjct: 292 LGIGQRTPFRIGIKESL 308
>gi|410949346|ref|XP_003981384.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Felis catus]
Length = 334
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 25/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 26 LPSRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 85
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 127
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 128 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 188 --EVEKLDESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 244
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +T
Sbjct: 245 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ET 302
Query: 300 LNIDPVT-YKDGVKLTL 315
L I T ++ G+K +L
Sbjct: 303 LGIGQRTPFRIGIKESL 319
>gi|62205265|gb|AAH93030.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 334
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E D AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREGDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|417399128|gb|JAA46594.1| Putative methionine adenosyltransferase 2 subunit beta [Desmodus
rotundus]
Length = 334
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPR-----------FEHVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + F QP V+V+CAA P V E PD+A +NV +S L+ L
Sbjct: 75 SSAVHHIIYDF-QPHVIVHCAAERRPDVVETQPDAAAQLNVDAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPCPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPISHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|390941974|ref|YP_006405735.1| dTDP-4-dehydrorhamnose reductase [Belliella baltica DSM 15883]
gi|390415402|gb|AFL82980.1| dTDP-4-dehydrorhamnose reductase [Belliella baltica DSM 15883]
Length = 309
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 17/310 (5%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
SKK +L+ G G LGQ L+ L +E + V T L + L + +D+
Sbjct: 5 SKKTILITGANGLLGQKLV--LQILEEDQFIVIPTG----LGDCRITDLRAKDRWKSLDI 58
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + F +PD V+N AA++ +CE + ++ + +N+ VN L E ++
Sbjct: 59 TNRDEVLDLFESF-KPDFVINTAAMTNVDICEAEKNTCVKLNIYG--VNNLIHACETLKS 115
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+HLSTD +++G Y EED PVN YG +K+ AE+ I ++I+R+ ++YG
Sbjct: 116 HLVHLSTDFIFDGEAGPYSEEDAPNPVNYYGWTKMKAEENIKNAKIKWSIIRTVLVYG-- 173
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S I W+ + L KGE ++ +D+ R P D+ + L L KQ +
Sbjct: 174 IANDMSRSNIILWVKNSLEKGETLQLVNDQFRTPTLAEDLAEGCL------LVIKKQAEG 227
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N+ G D ++ MA A+ S IK ++ + + + P I K + L
Sbjct: 228 VFNISGKDLLTPYDMAIATADYFNLDKSKIKKTNSKAFTQKAKRPMKTGFIIDKAINNLG 287
Query: 302 IDPVTYKDGV 311
P ++ DG+
Sbjct: 288 YSPKSFMDGI 297
>gi|428201502|ref|YP_007080091.1| dTDP-4-dehydrorhamnose reductase [Pleurocapsa sp. PCC 7327]
gi|427978934|gb|AFY76534.1| dTDP-4-dehydrorhamnose reductase [Pleurocapsa sp. PCC 7327]
Length = 292
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 143/296 (48%), Gaps = 31/296 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
+++LV G +G+LG +L Q + +DV T+ H+ +P + L V+L
Sbjct: 2 QKLLVTGASGFLGWNLCQQARQ----KWDVWGTYFTHAVEIPGVTL---------LKVEL 48
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F A+ F QP V++ AA S P C+ PD +INV SSL ++ ++
Sbjct: 49 ---TDFHALKQLFTDIQPAAVIHTAAQSKPNFCQEHPDETYAINVTSSLN--IARLCSDR 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ STD V+ G+ Y+E D ++P++ YG+ KV AE+ + E AI R +++G
Sbjct: 104 AIPCVFTSTDLVFNGLNPPYQETDPVSPISYYGEQKVLAERGMLECYPRTAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
SPV S IQ +L G+++ F DE R PV +L L+ +KQ+
Sbjct: 164 --VASPVAGSF-IQPFIEILKAGKELSLFTDEFRTPVSGSTAASGLL------LALEKQI 214
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
LL++GG + +SR Q ++AEI IK V D S+D +K
Sbjct: 215 AGLLHLGGKESISRYQFGRLLAEILELPQENIKTCQQKDVPMSAPRSPDTSLDSSK 270
>gi|423342692|ref|ZP_17320406.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
gi|409216947|gb|EKN09926.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
Length = 295
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 36/318 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G+ G+ +L LS G+ V + H P H+FV D++
Sbjct: 2 KKILVIGANGFAGRRILDKLSS-NGECEVVGCSLHPDIQP-----GEKHTFVRVDMN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV + F PDVV+NC+ALSVP CE + A + NV + V L+ E + +
Sbjct: 53 --DYPAVEVLFDHVCPDVVINCSALSVPDYCEQHREEAYATNVAA--VENLAHCCEQQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V++G Y EED AP+N YG +K E+ + C N+A+ R ++YG
Sbjct: 109 RFIHLSTDFVFDGKSDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
K+LP +Q + + L G+++ D+ R P +V D+ + L S
Sbjct: 168 -------KALPGQHGNILQLVKNRLEAGQEIRVVSDQYRTPTWVADIADGVEKLVYSGNS 220
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+ ++ G + +S +MA VA+ SLI PV+ + P + + I
Sbjct: 221 G------IYHICGGEYLSIAEMAYRVADYFKLDHSLICPVTTEEMKEATPRPRNSGLSID 274
Query: 295 KLVQTLNIDPVTYKDGVK 312
K L P T ++G++
Sbjct: 275 KAKLELGYRPHTLEEGLR 292
>gi|17230828|ref|NP_487376.1| hypothetical protein alr3336 [Nostoc sp. PCC 7120]
gi|17132431|dbj|BAB75035.1| alr3336 [Nostoc sp. PCC 7120]
Length = 294
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 29/314 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG HL Q + + ++V T+ S L V+L
Sbjct: 2 QKLLITGASGFLGWHLCQ----VAQQEWEVYGTYCSHALS-------IQGIKLLKVNL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F + PD V++ AA S P C+ PD + INV +S L+
Sbjct: 49 -TDFSEIKQIFNEIKPDAVIHTAAQSQPNFCQIHPDESYKINVTASCN--LAELCATSSI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
S++ V++GV S YKE D + PVN+YG+ KV AE I E+ I R +++G
Sbjct: 106 PYAFTSSELVFDGVNSPYKETDTVCPVNIYGEQKVLAEVGILERYPIATICRMPLMFGNA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T P KS IQ L G+++ F DE R PV K IL + +
Sbjct: 166 T--PTAKSF-IQPFIQTLQSGQELTLFIDEFRTPVSGTTAAKGILLTLGK-------VTG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
L+++GG +R+SR ++A + T+ IK V+ PAD+S+D ++ L
Sbjct: 216 LIHLGGKERISRYDFGHILAAVFQLPTTGIKACLQRDVNMAAPRPADVSLDSSQAF-ALG 274
Query: 302 IDPVTYKDGVKLTL 315
P++ K ++ L
Sbjct: 275 YQPLSIKSELEALL 288
>gi|441499381|ref|ZP_20981567.1| dTDP-4-dehydrorhamnose reductase [Fulvivirga imtechensis AK7]
gi|441436914|gb|ELR70272.1| dTDP-4-dehydrorhamnose reductase [Fulvivirga imtechensis AK7]
Length = 301
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 152/312 (48%), Gaps = 23/312 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSF---VFFDVDL 61
++LV G G LGQ L++ L G +V AT ++ D LP S+ F +D+
Sbjct: 2 KILVTGSNGLLGQKLIKLLLSEPG--IEVIATARNS-------DRLPESYGNYEFAALDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ +V K+ PDVV+N AA++ CE++ ++ +NV + V++L E ++
Sbjct: 53 TDETQVLSVIKKYA-PDVVINTAAMTNVDQCESEKEACRKLNVDA--VSYLIKACEATDS 109
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD +++G + E ++ PVN YG+SK+AAE+ I + ++AI R+ ++YG
Sbjct: 110 HLVHCSTDFIFDGTRGPLDENEKPNPVNYYGESKLAAEELIEKSNISWAIARTVLVYG-- 167
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ +S I W+ + L G+ + D+ R P D+ +L K+
Sbjct: 168 IAHDMSRSNIILWVKNSLEGGKDINVVDDQWRTPTLAEDLA------MGCYLIAKKRATG 221
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N+ G D ++ MA A+ SLI S + + P I K + L
Sbjct: 222 IYNISGKDMLTPYDMAIKTADFFKLDKSLIHKTDGSKFTQPAKRPPKTGFIIDKARKDLG 281
Query: 302 IDPVTYKDGVKL 313
+P ++ +G+K+
Sbjct: 282 YEPHSFDEGLKV 293
>gi|348666186|gb|EGZ06014.1| hypothetical protein PHYSODRAFT_532795 [Phytophthora sojae]
Length = 351
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 162/344 (47%), Gaps = 64/344 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIE----------GKPYDVAATHHSTPLPQLLLDALPHSF 54
R+LV+GGT Y+ Q LLQ + + + G+ VA T S P LP F
Sbjct: 3 RILVLGGTSYVAQFLLQRVLQDDALRVASGDQLGEISAVACTIRSEPF-----SPLPAGF 57
Query: 55 V-------------FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMS 101
V ++ VD+ + F P VV+NCAA+S P VC+ DP+ A +
Sbjct: 58 VTAGSEPAARAVRVYWQVDIVDEEALEKCVQDF-HPTVVINCAAISSPAVCQKDPNKACA 116
Query: 102 INVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV-----NVYGKSKV 156
P +VN L +H STD VYEG +++ + +E A V +VYG SK+
Sbjct: 117 ---PRGVVNLLEKLPWRTR--FVHFSTDFVYEGTQAWGESYEEDAAVSSSKLSVYGASKL 171
Query: 157 AAEKFI----YEKCSNFAILRSSIIYGPQTISPV--PKSLP--IQWIDSVLSKGEK---- 204
++F+ + F +LR + + GP ++PV KS P +QW+ L + E
Sbjct: 172 RFDQFLLSGHWSANFEFLVLRIANVVGP--VAPVFPNKSAPKFMQWLHQQLFQPETADVP 229
Query: 205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE--VVAE 262
++ + DE R +Y+ D+V I+ L + L+N+GG + +SRV++A + A
Sbjct: 230 LKLWSDEFRSYLYIHDLVSILFKLLA---TNANASATLVNLGGLEALSRVELARRYIAAG 286
Query: 263 IRGYSTSL------IKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ + +++ I+P + + VD G SP + + +L L
Sbjct: 287 AKHHVSAVATVTRAIEPTARARVDLGYPSPLNTKLSTARLAHLL 330
>gi|426230054|ref|XP_004009097.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Ovis aries]
Length = 334
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAQRPRNAQLDCSRL-ETL 303
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|426230056|ref|XP_004009098.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Ovis aries]
Length = 323
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 235 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAQRPRNAQLDCSRL-ETL 292
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 293 GIGQRTPFRIGIKESL 308
>gi|114051822|ref|NP_001039991.1| methionine adenosyltransferase 2 subunit beta [Bos taurus]
gi|122135265|sp|Q29RI9.1|MAT2B_BOVIN RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|88954131|gb|AAI14152.1| Methionine adenosyltransferase II, beta [Bos taurus]
gi|296485092|tpg|DAA27207.1| TPA: methionine adenosyltransferase 2 subunit beta [Bos taurus]
Length = 334
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAQRPRNAQLDCSRL-ETL 303
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|434387600|ref|YP_007098211.1| dTDP-4-dehydrorhamnose reductase [Chamaesiphon minutus PCC 6605]
gi|428018590|gb|AFY94684.1| dTDP-4-dehydrorhamnose reductase [Chamaesiphon minutus PCC 6605]
Length = 293
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 26/294 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q ++ T+ + + D H +D +
Sbjct: 3 KLLITGVSGFLGWNLCQQARS----QWETHGTYSQNAIE--ISDVRLHQIDLTQLDAVTA 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DA+A PD +++ AA + P C+ P+ + IN+ +S L+ + +
Sbjct: 57 K-IDAIA-----PDAIIHTAAAASPNFCQTHPELSARINIGAS--QLLAKICNRAKIPFV 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G + Y+E D ++P+N+YG+ KVAAE+ I + I R +++G
Sbjct: 109 FTSTDLVFDGKNAPYRETDPVSPLNIYGEQKVAAERKILDTYPQATICRMPLMFG--MAP 166
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLLL 243
P S WI + L+ + ++ F DE R PV + +++AL + +L
Sbjct: 167 PTASSFLQPWIKA-LAAEQTLQLFIDEFRTPVSAVTAARGLLMAL--------RSSPGIL 217
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
N+GG +R+SR + ++AE G+ SL+ P+S + AD+S+D TK +
Sbjct: 218 NLGGKERLSRYEFGRLLAEAFGFDLSLLLPISQRDLPMAAPRAADVSLDSTKAI 271
>gi|149726118|ref|XP_001503384.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Equus caballus]
Length = 323
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVLV G TG LG+ + + + + Q+ LLD+ + DV
Sbjct: 18 RRVLVTGATGLLGRAVYREFKQNNWHAFGCGYRRARPKFEQVNLLDSDAVRHIVHDV--- 74
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 -------------QPHVIVHCAAERRPDVVENQPDAASRLNVDASRN--LAKEAAAIGAF 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 120 LIYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 178 VEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 236
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G P + +D +KL +TL I
Sbjct: 237 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGALRPRNAQLDCSKL-ETLGI 294
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 295 GQRTPFRIGIKESL 308
>gi|410096384|ref|ZP_11291371.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides goldsteinii
CL02T12C30]
gi|409226348|gb|EKN19257.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides goldsteinii
CL02T12C30]
Length = 294
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 42/319 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDVDLKS 63
+ L++G G+ G+ +LQ LS G + H D P S F D+
Sbjct: 2 KTLIIGANGFTGRRILQHLSLCGGYELTGCSLHK---------DIQPESNTRFVQADIND 52
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +PDVV+N +ALSVP CE+ + A + NV + V + E + +
Sbjct: 53 HPVIGRLIGEM-RPDVVINASALSVPDYCESHHEEAHAANVLA--VENMVRCCEQEGSRF 109
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD V++G +S Y EED APVN YG SK E + CSN+A +R ++YG
Sbjct: 110 IHLSTDFVFDGKNRSLYIEEDIPAPVNYYGLSKYQGELAVAANCSNYANVRVVVVYG--- 166
Query: 183 ISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
K+LP +Q + + L G+++ D+ R P +V D+ + +
Sbjct: 167 -----KALPGQHGNILQLVKNRLEAGQQIRVVSDQYRTPTWVEDIA----------IGVE 211
Query: 237 KQMQLLLN----VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
K M + LN + G + +S +A VA+ SLI PV+ ++ P +
Sbjct: 212 KLMHVSLNGTWHICGGECLSIADIAYRVADYFKLDRSLIIPVTTEEMNEATPRPRFSGLS 271
Query: 293 ITKLVQTLNIDPVTYKDGV 311
I K + L P T ++G+
Sbjct: 272 IEKAKRELGYTPHTLEEGM 290
>gi|417764863|ref|ZP_12412830.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417771570|ref|ZP_12419464.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418683522|ref|ZP_13244721.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418697021|ref|ZP_13258022.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
str. H1]
gi|418708110|ref|ZP_13268923.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418728723|ref|ZP_13287294.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12758]
gi|421127687|ref|ZP_15587908.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421134312|ref|ZP_15594453.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|289451026|gb|ADC93942.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar
Autumnalis]
gi|289451110|gb|ADC94025.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar
Grippotyphosa]
gi|400324753|gb|EJO77043.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353307|gb|EJP05483.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409946357|gb|EKN96367.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409955188|gb|EKO14128.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
str. H1]
gi|410021611|gb|EKO88395.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410434746|gb|EKP83881.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410771600|gb|EKR46801.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776575|gb|EKR56552.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12758]
gi|455669232|gb|EMF34388.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 296
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 35/317 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K + TH L + LD + ++D
Sbjct: 1 MDSNTILITGASGLLGHHLSRFFLENGNKVIALRKTH---SLGIIGLDEI-------EID 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP-SSLVNWLSSFTENK 119
L + + K G PD +++CA L+ CE + A I++ S ++ +S +K
Sbjct: 51 LLDFNTVKNLLTKIG-PDYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD +++G E+ + P+NVYGK+K +E+ + S ILR++ +G
Sbjct: 110 ---MIHISTDHLWDGTMQMVTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRTN-FFG 165
Query: 180 P-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
P Q++S WI + L++ EK+ F D P+ + + ++IL L
Sbjct: 166 PGLQWRQSLS--------DWIINSLNRNEKINAFSDVFFTPISIYHLARVILFLI----- 212
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
K+ + + + G +R+S+ A +A+ ST LI+P+S ++ P D+S+
Sbjct: 213 -QKKAKGIYHTVGSERISKYDFAISIAKSFNKSTELIRPISIQNIQFNALRPLDMSLSTD 271
Query: 295 KLVQTLNIDPVTYKDGV 311
K+V LN+ T + G+
Sbjct: 272 KIVGFLNVSMPTVQAGI 288
>gi|345302764|ref|YP_004824666.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus
SG0.5JP17-172]
gi|345111997|gb|AEN72829.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus
SG0.5JP17-172]
Length = 308
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 19/313 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +R+L+ G G LGQ L+ LS+ YDV AT P P+ S + +D
Sbjct: 1 MIYQRILITGANGMLGQELVAQLSQ--HAEYDVLATARD-PEPRFR----GGSCGYVPLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F P VV+NCAA++ CE + ++ +NV + V L+
Sbjct: 54 ITDARAMRRIFQDF-TPTVVINCAAMTQVDRCEIEKEACWRVNVEA--VETLARLCRQFG 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIYG 179
LI +STD V++G Y+E D P+N YG+SK+A+E + E +AI R+ ++YG
Sbjct: 111 ARLIQVSTDFVFDGTAGPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
T + +S W+ LS+G ++ D+ R P YV D+ I R + +K
Sbjct: 171 --TGEQLSRSNIALWVIEQLSQGRRIRVVTDQWRTPTYVADLAAGI----ERIVRYNKHG 224
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + +S A ++A++ SLI+PV ++++++ P I K
Sbjct: 225 --IYHISGREFLSVYDFACLIADVFDLDRSLIEPVDSATLNQVAPRPPRTGFIILKAETE 282
Query: 300 LNIDPVTYKDGVK 312
L P + + ++
Sbjct: 283 LGYRPRSMPEALR 295
>gi|431918117|gb|ELK17345.1| Methionine adenosyltransferase 2 subunit beta [Pteropus alecto]
Length = 346
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 151/314 (48%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ V +D
Sbjct: 41 RRVLITGATGLLGRAVYKEFRQNNWHAFGCGFRRARPKFEQVNLLDSDAVHNVIYDF--- 97
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 98 -------------QPHVIVHCAAERRPDVVENQPDAAAQLNVDAS--GNLAKEAAAIGAF 142
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 143 LIYISSDYVFDGTDPPYGEEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 200
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 201 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 259
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 260 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNSQLDCSKL-ETLGI 317
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 318 GQRTPFRIGIKESL 331
>gi|224539746|ref|ZP_03680285.1| hypothetical protein BACCELL_04655, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224518646|gb|EEF87751.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus
DSM 14838]
Length = 289
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 21/306 (6%)
Query: 12 TGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAV 70
G+ G+ +L LS Y V H P D+ + F+ D+ G +
Sbjct: 1 NGFTGRRILNDLSR--NDEYIVTGCSLHDDIAP----DSGNYRFISADI---CQMGEQSA 51
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
+ +P++V+N +ALSVP CE + A SINV + V L+ E IHLSTD
Sbjct: 52 LFREVRPNIVINTSALSVPDYCEAHREEADSINV--NAVGQLAFRCEASAARFIHLSTDF 109
Query: 131 VYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V+ G Y EED PVN YG +K+ EK + E CSN+AI R ++YG P
Sbjct: 110 VFNGDTGQLYTEEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGAAL--PGQHG 167
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD 249
+Q + + L E++ D+ R P YV DV + I L N + ++ G +
Sbjct: 168 NILQLVANRLRNNEEIRVVSDQWRTPTYVGDVSQGIEKLIN------HPNNGIYHICGSE 221
Query: 250 RVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
++ +A VA+ SLI PV+ + P + I K + L P T ++
Sbjct: 222 CLTIADIAYRVADTLNLDYSLILPVTTKQMGETTPRPRFSGLSIEKARRELGYQPHTLEE 281
Query: 310 GVKLTL 315
G+KL
Sbjct: 282 GIKLMF 287
>gi|428211935|ref|YP_007085079.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
gi|428000316|gb|AFY81159.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
Length = 291
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 27/306 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG +L Q +++ + + +H T LP L VDL
Sbjct: 2 KKLLITGSSGFLGWNLCQ-VAQANWQVFGTYCSHKIT-LPGCEL---------MPVDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
++ L+ PD V++ AA S P VC+ P+ + INV ++ + L+ + E
Sbjct: 51 FPALKSLFLEIC-PDAVIHAAAQSQPNVCQTYPEDSYKINVTAA--SDLAGLCGDAEIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I STD V++G+ Y E D + PV+ YG+ KV AE + ++ + R +++G
Sbjct: 108 IFTSTDLVFDGLNPPYAETDAVCPVSRYGEQKVQAEGEMRDRNPQTIVCRMPLMFGEG-- 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
PV +S +Q + L G+ + F DE R PV + + ++LAL KQ + L
Sbjct: 166 GPVAQSF-LQPMLQTLRSGQDLALFIDEFRTPVSGKTAAQGLLLAL--------KQNEKL 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
L++GG +RVSR E V E+ IKP V P D+S+D +K L
Sbjct: 217 LHLGGKERVSRYSFFEQVIEVLEVQQGRIKPCRQQDVKMSAPRPPDVSLDSSKAF-NLGY 275
Query: 303 DPVTYK 308
+P++ +
Sbjct: 276 NPLSLR 281
>gi|392969674|ref|ZP_10335089.1| dTDP-4-dehydrorhamnose reductase [Fibrisoma limi BUZ 3]
gi|387841868|emb|CCH57147.1| dTDP-4-dehydrorhamnose reductase [Fibrisoma limi BUZ 3]
Length = 303
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHS--FVFFDV 59
KKR+L+ G G LGQ L+ L++ +P D+ AT + LP+S + + +
Sbjct: 2 KKRMLLTGANGLLGQKLVGLLTQ---QPNIDLIATARGA-------NRLPYSEGYTYQPM 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ V + QP VV++ AA++ CE+ D+ + NV + V +L
Sbjct: 52 DITDRQQVLDV-ISETQPQVVIHTAAMTDVDKCESQKDACWAQNVQA--VEYLVEACRAT 108
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 109 NTFLLHVSTDFIFDGTAGPYDEEAEGNPISFYGWSKYAAEKVVIHSGLRWAIARTVLVYG 168
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ L +G+ ++ D+ R P D+ T +L D++
Sbjct: 169 --IAHDMSRSNIILWVKKSLEEGKNIKVVTDQWRSPTLAEDLA------TGCYLIGDQEA 220
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + N+ G + ++ +MA A+ G SLI AS+ + + P + K
Sbjct: 221 EGIFNISGKEVLTPYEMAIRTADYFGLDKSLIAQADASTFTQPARRPPRTGFILDKAKSV 280
Query: 300 LNIDPVTYKDGV 311
L +P ++++G+
Sbjct: 281 LGYNPHSFEEGI 292
>gi|301115600|ref|XP_002905529.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110318|gb|EEY68370.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 338
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 62/337 (18%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS--------------EIEGKPYDVAATHHS---TPLPQL 45
K RVLV+GGT Y+ Q +LQ L E+E VA T S PLP
Sbjct: 2 KTRVLVLGGTSYVAQFVLQRLQQYATLRVVDEDTVKEVEA----VACTTRSQPFAPLPAG 57
Query: 46 LLDALPHSF--------VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPD 97
+ A SF V++ VDL + F +P VV+NC A+S P VC+ +P+
Sbjct: 58 FITANSDSFSESKQTVTVYWQVDLMDLEALNKCIDDF-RPTVVINCTAISSPAVCQKEPE 116
Query: 98 SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK---SFYKEEDEIAP--VNVYG 152
A + P LV L +HLSTD VYEG K + YKE+D ++ ++VYG
Sbjct: 117 RA---SAPRGLVALLDELPWPIR--FVHLSTDFVYEGTKPQGTSYKEDDAVSSPDLSVYG 171
Query: 153 KSKVAAEKFIYEK--CSNFA--ILRSSIIYGPQTISPVPKSLP--IQWIDSVLSKGEK-- 204
K+ + F+ + +N ILR + + GP +S P ++W+ L + E
Sbjct: 172 VGKLRFDHFLQNRPNSTNLQALILRIANVVGPTAPLFPDRSAPKFMEWLHHQLFQLETAT 231
Query: 205 -VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
++ + DE R +YV D+V +++ L L K+ L+NVGG D +SRV++A
Sbjct: 232 PLKLWSDEFRSYLYVFDLVDLLIELLTINL---KEHTTLVNVGGIDALSRVELAN----- 283
Query: 264 RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
I P S + VD G SP + ++ +L L
Sbjct: 284 -----KHIAPTSRAQVDLGYPSPLNTKLNTLRLANLL 315
>gi|444709551|gb|ELW50560.1| Hyaluronan mediated motility receptor [Tupaia chinensis]
Length = 981
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 673 IPNRRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 718
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 719 LLDSNAVHEIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAATIG 775
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 776 AFLIYISSDYVFDGTNPPYREEDIPTPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 834
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 835 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 892
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL
Sbjct: 893 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETL 950
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 951 GIGQRTPFRIGIKESL 966
>gi|375144324|ref|YP_005006765.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
gi|361058370|gb|AEV97361.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
Length = 294
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 151/311 (48%), Gaps = 21/311 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKS 63
+VL+ G G LGQHL + L + K Y V AT + LP + +S+ D+
Sbjct: 2 KVLITGANGLLGQHLTKLLLD---KNYQVVATGRGESRLP--FEPSGNYSYHSMDI---- 52
Query: 64 GSGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ FD A + +PDVVV+ AA++ CE P+ INV + + + E +
Sbjct: 53 ANAFDTYAVMNRERPDVVVHAAAMTQVDECELQPEQCDRINVQGTA--QILTDAETFSSH 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
I++STD V++G K Y E+DE P+++YG +K+ AE + FAI+R+ ++YG
Sbjct: 111 FIYISTDFVFDGEKGNYSEDDEPLPISLYGFTKLQAESMVQTSELPFAIVRTCLVYG--N 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + W L +G+ ++ D+ R P YV D+ K I+ + +K+ +
Sbjct: 169 LLKGTRSNIVSWAKDSLEQGKTIQVVSDQVRTPTYVGDLAKGIVLII------EKKATGI 222
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N+ G D ++ +A A I V AS+ + + P I K + L
Sbjct: 223 YNISGKDWLTPYDIAIKTANKYQLDAGRIVKVDASTFKQPGRRPLKTGFVIEKARKELGY 282
Query: 303 DPVTYKDGVKL 313
+P+++ +G+ L
Sbjct: 283 EPMSFDEGLNL 293
>gi|428311109|ref|YP_007122086.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
gi|428252721|gb|AFZ18680.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
Length = 291
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 153/311 (49%), Gaps = 35/311 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++LV G +G+LG +L Q I + +D+ T H+ +P + L VDL
Sbjct: 2 KKLLVTGASGFLGWNLCQ----IAKQEWDIYGTSFSHAIEIPGITL---------LKVDL 48
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F+ + F QPD V++ AA S P +C+++P+ + INV +S L+ +
Sbjct: 49 RD---FEELKRIFQEIQPDAVIHTAAQSSPNICQSNPEESHKINVTASCN--LAGLCADY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
STD V+ G+ + YKE D ++PVN+YG+ KV AE+ + E+ A+ R +++G
Sbjct: 104 SISCAFTSTDLVFNGLNAPYKETDSVSPVNLYGEQKVMAEEGMLERYPMTAVCRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
++ P +Q L +G+++ F DE R P K ++LAL ++
Sbjct: 164 ---VAAPPAQSFMQPFIQTLREGKELSLFTDEFRTPASGSTAAKGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ +++GG +R+SR + E+ + +K + V P D+S+D + +
Sbjct: 213 VNGRIHLGGKERMSRYDFGRSLVEVFELPSEGLKGCGQADVKMAASRPPDVSLD-SSMAF 271
Query: 299 TLNIDPVTYKD 309
L P++ ++
Sbjct: 272 DLGYAPLSLRE 282
>gi|434398695|ref|YP_007132699.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
gi|428269792|gb|AFZ35733.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
Length = 295
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 32/314 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G +G+LG ++ Q L++ + + Y +H++ Q ++ DL
Sbjct: 2 NKLLITGVSGFLGWNIYQ-LAKSQWQVYGTCYSHYNLYSQQNIIK----------TDLT- 49
Query: 64 GSGFDAVALK--FG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D VALK F P V++ AA S P C+ +P + INV +S+ L+
Sbjct: 50 ----DLVALKNLFKTIDPSAVIHTAAASKPNFCQTNPIESYEINVTASMN--LAHLCAEY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ I STD V++G Y E D ++P++ YG+ KV AE+ + E A+ R +++G
Sbjct: 104 QIPCIFTSTDLVFDGQNPPYSETDPVSPISYYGEQKVVAEQQMLEIYPATAVCRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
SP S +ID+ L G+++ F DE R PV +A L+ ++Q+
Sbjct: 164 --MPSPTANSFIQGFIDN-LQTGKELNLFIDEFRTPV------SGTMAAQGLLLALEQQV 214
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
LL++GG +R+SR Q ++AE G+ST LIKP V D S+ +K
Sbjct: 215 SGLLHLGGKERISRYQFGLLLAETMGFSTDLIKPCRQKDVVMAAPRSPDTSLHSSKAF-A 273
Query: 300 LNIDPVTYKDGVKL 313
L P++ K+ + L
Sbjct: 274 LGYQPLSLKEQLSL 287
>gi|418722899|ref|ZP_13281873.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12621]
gi|409963733|gb|EKO27456.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12621]
gi|456822228|gb|EMF70714.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Canicola str. LT1962]
Length = 296
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 35/317 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K + TH L + LD + ++D
Sbjct: 1 MDSNTILITGASGLLGHHLSRFFLENGNKVIALRKTH---SLGIIGLDEI-------EID 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP-SSLVNWLSSFTENK 119
L + + K G PD +++CA L+ CE + A I++ S ++ +S +K
Sbjct: 51 LLDFNIVKNLLTKIG-PDYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD +++G E+ + P+NVYGK+K +E+ + S ILR++ +G
Sbjct: 110 ---MIHISTDHLWDGTMQMVTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRTN-FFG 165
Query: 180 P-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
P Q++S WI + L++ EK+ F D P+ + + ++IL L
Sbjct: 166 PGLQWRQSLS--------DWIINSLNRNEKINAFSDVFFTPISIYHLARVILFLI----- 212
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
K+ + + + G +R+S+ A +A+ ST LI+P+S ++ P D+S+
Sbjct: 213 -QKKAKGIYHTVGSERISKYDFAISIAKSFNKSTELIRPISIQNIQFNALRPLDMSLSTD 271
Query: 295 KLVQTLNIDPVTYKDGV 311
K+V LN+ T + G+
Sbjct: 272 KIVGFLNVSMPTVQAGI 288
>gi|329665893|pdb|2YDY|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit In Orthorhombic Crystal Form
Length = 315
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 3 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 49 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + D ++
Sbjct: 164 EKLEESAVTVXFDKVQFSNKSANXDHWQQRFPTHVKDVATVCRQLAEK-RXLDPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G ++ ++ + A +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 223 HWSGNEQXTKYEXACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGIG 280
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 281 QRTPFRIGIKESL 293
>gi|375012065|ref|YP_004989053.1| dTDP-4-dehydrorhamnose reductase [Owenweeksia hongkongensis DSM
17368]
gi|359347989|gb|AEV32408.1| dTDP-4-dehydrorhamnose reductase [Owenweeksia hongkongensis DSM
17368]
Length = 298
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 147/307 (47%), Gaps = 18/307 (5%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L G G LGQ L+ LS+ + + +A L + + +D+
Sbjct: 2 KILTTGSNGLLGQKLVHKLSK-DSEVELIATARGENRLSN------KEGYKYHSLDITDE 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K+ +PD V++ AA++ CE D + +NV ++ ++ + L+
Sbjct: 55 KAVAETIVKY-KPDSVIHTAAMTNVDACEADKEGCDKLNVDAT--QYIVDACKANNAHLV 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
HLSTD +++G Y EE + P++ YG+SK+ AE+ + E N AILR+ ++YG
Sbjct: 112 HLSTDFIFDGKDGPYDEEAKPNPISYYGESKLKAEEIVLESGQNAAILRTVLVYG--IAE 169
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S W L KG+++ D+ R P D+ + L+ ++ + + N
Sbjct: 170 DMSRSNIALWAKGALQKGQQINVVDDQFRSPTLAEDLADGCI------LAAKQKAKGIYN 223
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ G D++S +++ + VA+ LI PVS++++ + + P + K ++ L P
Sbjct: 224 ISGKDQLSVLEIVQQVADFWKLDKDLINPVSSTTLSQPAKRPPKTGFILDKAIRELGYKP 283
Query: 305 VTYKDGV 311
++ +G+
Sbjct: 284 HSFMEGL 290
>gi|383318636|ref|YP_005379477.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
gi|379320006|gb|AFC98958.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
Length = 280
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 150/300 (50%), Gaps = 34/300 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+++V G+G LG +++ L + ++V T++ TP + D+ + G+
Sbjct: 1 MILVTGSGLLGSDMIRVLR----REHEVVGTYNKTP---------KEGTIRLDITDREGT 47
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A++ +P+ VV+ AAL+ CE+ AM++N + + + +++
Sbjct: 48 ---IRAIRELKPEYVVHTAALTNVDYCEDHEAEAMAVNGQGT--KNVVDAARAAGSKVVY 102
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G + Y+E+D++ P++ Y +SK+ E + E+ +F I R+S++YG
Sbjct: 103 VSTDYVFDGSRGMYREDDDVCPISAYARSKLMGELHV-EEMEDFIIARTSVVYGN----- 156
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ + W+ L+KG++++ D+ P D + + AL S + +
Sbjct: 157 -ARQNFVSWVKDSLAKGQRIKVVTDQFNSPTLSYDCAEAVAALIRSGASG------IYHT 209
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV---QTLNI 302
G +R+SR + A +A G LI+PV S++ + + P D S+D+T++ + LNI
Sbjct: 210 AGSERISRYEFARKIALFYGLDLGLIEPVPTSALSQKARRPMDSSLDVTRISAYHRMLNI 269
>gi|344265237|ref|XP_003404691.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Loxodonta africana]
Length = 323
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 29/316 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVD 60
+RVL+ G TG LG+ + + Q+ L DA+ H+ F
Sbjct: 18 RRVLITGATGLLGRAVYKEFQHNNWHAVGCGFRRARPKFEQVNLLDPDAVHHTLHDF--- 74
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ---------------QPHVIVHCAAERRPDVVENQPDAASQLNVEAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENHLGAAVLRIPVLYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -DVEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 235 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSRL-ETL 292
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 293 GIGQRTPFRIGIKESL 308
>gi|344265235|ref|XP_003404690.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Loxodonta africana]
Length = 334
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 29/316 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVD 60
+RVL+ G TG LG+ + + Q+ L DA+ H+ F
Sbjct: 29 RRVLITGATGLLGRAVYKEFQHNNWHAVGCGFRRARPKFEQVNLLDPDAVHHTLHDF--- 85
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ---------------QPHVIVHCAAERRPDVVENQPDAASQLNVEAS--GNLAKEAAAVG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENHLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -DVEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSRL-ETL 303
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|313482787|ref|NP_001186203.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Mus
musculus]
gi|26344854|dbj|BAC36076.1| unnamed protein product [Mus musculus]
gi|74187532|dbj|BAE36716.1| unnamed protein product [Mus musculus]
gi|148700382|gb|EDL32329.1| methionine adenosyltransferase II, beta, isoform CRA_b [Mus
musculus]
Length = 323
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRTGIKESL 308
>gi|19527234|ref|NP_598778.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Mus
musculus]
gi|81880218|sp|Q99LB6.1|MAT2B_MOUSE RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|13097444|gb|AAH03457.1| Methionine adenosyltransferase II, beta [Mus musculus]
gi|148700381|gb|EDL32328.1| methionine adenosyltransferase II, beta, isoform CRA_a [Mus
musculus]
Length = 334
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRTGIKESL 319
>gi|338213431|ref|YP_004657486.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
gi|336307252|gb|AEI50354.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
Length = 298
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 22/312 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY--DVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G G LGQ L++ L + P+ +A + LP + ++ +D+
Sbjct: 2 KKILITGSNGLLGQKLVELLLK---HPHIQCIATARGANRLP------FTEGYDYYSMDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + K +PDVV++ AA++ CE+D D+ + NV + V ++ +
Sbjct: 53 TKREEVEDIIGK-TKPDVVIHGAAMTNVDQCESDKDNCWAQNVHA--VQYIVDACRTYDI 109
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 110 FLCHVSTDFIFDGAAGPYTEEGEANPLSFYGWSKYAAEKIVQHSGIRWAIARTVLVYG-- 167
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ ++ I W+ L + ++ D+ R P D+ +L D++
Sbjct: 168 IAHDMSRTNIILWVKKSLEDAKNIKVVTDQWRTPTLAEDLA------MGCFLIADQEATG 221
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N+ G D ++ +MA + A+ G SLI +S+ + + PA + K + L
Sbjct: 222 IFNISGKDFLTPYEMAILTADYFGLDKSLIAQADSSTFSQPAKRPARTGFVLDKSRRVLG 281
Query: 302 IDPVTYKDGVKL 313
+P ++ +G+ +
Sbjct: 282 YEPRSFSEGIAI 293
>gi|186683883|ref|YP_001867079.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
gi|186466335|gb|ACC82136.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
Length = 290
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 27/310 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG HL Q L++ E +++ T+ S PL + L + F +LK
Sbjct: 2 KKLLITGASGFLGWHLCQ-LAKPE---WEIYGTYLSHPLEIPGIKTLKANLTNFQ-ELKR 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F+ V +P+ V++ AA S P C+ +P + +INV +S ++ +
Sbjct: 57 I--FNDV-----KPEAVIHTAAHSQPNFCQTNPKESHAINVIASCN--IAGLCADNSIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
STD V++G+ + Y+E D + PVN+YG+ K AE + E+ A+ R +++G T
Sbjct: 108 AFTSTDLVFDGLNAPYQEIDAVCPVNLYGEQKAIAEAGMLERYPLTAVCRMPLMFGAAT- 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
P KS IQ L +++ F DE R PV K ++LAL +++ +
Sbjct: 167 -PTAKSF-IQPFIQTLQAEKELNLFIDEFRTPVSGTTAAKGLLLAL--------EKVNGI 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+++GG +R+SR +++ E+ T+ +K V PAD+S+D +K L
Sbjct: 217 IHLGGKERLSRYDFGKILVEVFQLPTTKLKSCRQEDVKMAAPRPADVSLDSSKAF-ALGY 275
Query: 303 DPVTYKDGVK 312
P++ K+ ++
Sbjct: 276 QPLSLKEELQ 285
>gi|354565752|ref|ZP_08984926.1| dTDP-4-dehydrorhamnose reductase [Fischerella sp. JSC-11]
gi|353548625|gb|EHC18070.1| dTDP-4-dehydrorhamnose reductase [Fischerella sp. JSC-11]
Length = 289
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 144/294 (48%), Gaps = 30/294 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G +G+LG HL Q L+ ++ + Y TH + +P L V+L
Sbjct: 4 KLLVTGASGFLGWHLCQ-LANLDWEVYGTYLTH-AVEIPNTKLQ---------KVNL--- 49
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F + F QP V++ AA S P C+N P+ + + NV S ++ +
Sbjct: 50 TNFQELKQIFNEIQPAAVIHTAAQSQPNYCQNHPEESYATNVIVS--QNIADLCADASIP 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ STD V++G+ Y+E D + PVN YG+ KV AE + E+ A+ R +++G T
Sbjct: 108 CVFTSTDLVFDGLNPPYRETDPVCPVNRYGEQKVMAEVGMLERYPMTAVCRMPLMFGAAT 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P S IQ L +G++++ F DE R PV K ++LAL +++Q
Sbjct: 168 --PTATSF-IQPFIKTLQEGKELKLFLDEFRTPVSATTAAKGLLLAL--------EKVQG 216
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
++++GG +R+SR ++ EI T+ +K V P D+S+D +K
Sbjct: 217 IIHLGGQERISRYDFGCLLVEIFQLPTTGLKACRQQDVKMAAPRPRDVSLDSSK 270
>gi|296413040|ref|XP_002836226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630035|emb|CAZ80417.1| unnamed protein product [Tuber melanosporum]
Length = 309
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 152/317 (47%), Gaps = 25/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+K V+V GGTG LG+ ++ EG + T +S P +L VD
Sbjct: 1 MSEKVVVVTGGTGQLGRQCVKAF---EGAKWKTIGTGYSRANPPAILK----------VD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L +G A L+ +P VVV+CAA P C+ DP+ +NV +S N L+ N++
Sbjct: 48 L-GNAGEVAGLLEEVKPKVVVHCAAERFPDKCDADPEGVKRLNVQAS--NSLAQECANRD 104
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+LI++STD V++G Y+ + P N YG++K+A E+ + + R ++Y
Sbjct: 105 IILIYISTDYVFDGKPGAAPYEADAATNPANFYGETKLAGEQAVLSAWRKSVVFRIPVLY 164
Query: 179 GPQTISPVPKSLPIQWIDSVLSKG--EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
G + +S +D VL+K E+VE H R P DV +++ + R+ S D
Sbjct: 165 G--EVEESKESAVNVLLDMVLNKAGKERVEMDHWSIRYPTNTSDVARVLKDVAERYTSAD 222
Query: 237 --KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+ +L DR+++ ++ + ++EI G S + I + V P D + T
Sbjct: 223 DIDSLPKVLQFSSEDRMTKYEICQKLSEIAGLSINHIVGNDKNHPSVAVMRPYDCHLS-T 281
Query: 295 KLVQTLNIDPVTYKDGV 311
K ++ LNI T GV
Sbjct: 282 KALKELNISVDTIPFGV 298
>gi|414078574|ref|YP_006997892.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
gi|413971990|gb|AFW96079.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
Length = 291
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 38/296 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL------LLDALPHSFVFF 57
K++L+ G +G+LG HL Q L+++ + Y TH +P + L D +F
Sbjct: 2 KKLLITGVSGFLGWHLCQ-LAQLGWEVYGTYHTHF-LEIPDMKMVKVNLTDFQELKGIFN 59
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+ +PD V++ AA S P C+ + INV +S ++
Sbjct: 60 DI----------------KPDAVIHTAAQSQPNYCQLHSQESYKINVTASCD--IAGLCA 101
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ L STD V++G+ + Y+E D+++PVN+YG+ KV AE I + AI R ++
Sbjct: 102 DNSLPLAFTSTDLVFDGLNAPYQEIDQVSPVNIYGEQKVEAEAGILKVYPQAAICRMPLM 161
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSED 236
+G +T P KS Q+I +L G+++ F DE R PV K ++LAL
Sbjct: 162 FGRET--PTAKSFIQQFI-QILKDGKELSLFIDEFRTPVSANTAAKGLLLAL-------- 210
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+++ ++++GG +R+SR + +++ EI +K + V P D+S+D
Sbjct: 211 EKVNGIIHLGGKERISRYEFGKILVEILQLPNDKLKSCFQADVKMAAARPKDVSLD 266
>gi|425459945|ref|ZP_18839431.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9808]
gi|389827492|emb|CCI21189.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9808]
Length = 292
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K AT + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWATFGTY---------LNHNVNSNDRNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D VA+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLVAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|395505022|ref|XP_003756845.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Sarcophilus harrisii]
Length = 334
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 29 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGYSRARPR-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ E+ + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDTPNPLNLYGKTKLEGERAVLENNVGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 190 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ S ++P++ S V G P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPNSHLRPITDSPV-LGAPRPRNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRVGIKESL 319
>gi|395505024|ref|XP_003756846.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Sarcophilus harrisii]
Length = 323
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 18 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGYSRARPR-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ E+ + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDTPNPLNLYGKTKLEGERAVLENNVGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 179 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ S ++P++ S V G P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPNSHLRPITDSPV-LGAPRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRVGIKESL 308
>gi|268317519|ref|YP_003291238.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252]
gi|262335053|gb|ACY48850.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252]
Length = 308
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 148/313 (47%), Gaps = 19/313 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +R+L+ G G LGQ L+ LS YDV AT P P+ S + +D
Sbjct: 1 MLYQRILITGANGLLGQELVAQLSW--HAEYDVLATARD-PEPRFR----GGSCGYVPLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F P VV+NCAA++ CE + ++ +NV + V L+
Sbjct: 54 ITDARAVRRIFQDF-TPTVVINCAAMTQVDRCEIEKEACWRVNVEA--VETLARLCRQFG 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIYG 179
LI +STD V++G Y+E D P+N YG+SK+A+E + E +AI R+ ++YG
Sbjct: 111 ARLIQVSTDFVFDGTAGPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
T + +S W+ LS+G ++ D+ R P YV D+ I R + +K
Sbjct: 171 --TGEQLSRSNIALWVIEQLSQGRRIRVVTDQWRTPTYVADLAAGI----ERIVRYNKHG 224
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ ++ G + +S A ++A++ SLI+PV ++++++ P I K
Sbjct: 225 --IYHISGREFLSVYDFACLIADVFDLDRSLIEPVDSATLNQVAPRPPRTGFIILKAETE 282
Query: 300 LNIDPVTYKDGVK 312
L P + + ++
Sbjct: 283 LGYRPRSIPEALR 295
>gi|84489910|ref|YP_448142.1| dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM
3091]
gi|84373229|gb|ABC57499.1| predicted dTDP-4-dehydrorhamnose reductase [Methanosphaera
stadtmanae DSM 3091]
Length = 286
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 29/296 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ + GG+G LG+ L + I ++ +H+S P + D+
Sbjct: 2 KFFITGGSGLLGERL----ATIASNDDEIVLSHNSNPTKNTI-----------KCDITDK 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + V K +PD +V+CAA++ +CE++ D A IN S ++ EN +I
Sbjct: 47 NEVEKVINK-NKPDTIVHCAAMTDVDLCEDEIDIAYRIN--SDGTRNMAQAAENIGAKII 103
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K +Y E+DE+ P+ +Y KSK E + + +N+AI R S++YG
Sbjct: 104 YVSTDFVFDGDKGYYSEDDEVNPLGIYAKSKYDGEVQLKKYSTNWAIARVSVLYGWH--- 160
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K+ W+ + L + D+ P Y + + I + +DK + +
Sbjct: 161 --KKANFTTWVINQLRSNNSINIVTDQINSPTYADNAGEAIFEIA----KQDKNG--IYH 212
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
G DR++R + +AE + LI P ++ + P D S+++ K+ + L
Sbjct: 213 TAGNDRINRFDFTQKIAEAFNLNKDLINPTTSDKFIQKAPRPRDSSLNVNKIKKEL 268
>gi|425456839|ref|ZP_18836545.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9807]
gi|389801969|emb|CCI18926.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9807]
Length = 292
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 154/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KRLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV++YG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSIYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + I+P V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPRQQIRPCLQCDVTMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSNK 281
>gi|393796123|ref|ZP_10379487.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
BG20]
Length = 296
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 31/304 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH---HSTPLPQLLLDALPHSFVFFDVDL 61
+ +V G G +G L+ L + Y H H P LD L +L
Sbjct: 2 KYVVTGSAGLIGNQLVSDLEQSGQTVYSCYNKHKPLHGIPTK---LDLL---------NL 49
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K S L+ QPDV+++ AAL+ CE++P+ A IN ++ + T
Sbjct: 50 KEISN----VLRKLQPDVIIHLAALTDVEKCESEPNLAYLINTKAT--EHIVKETNQIGC 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L +LSTD V++G K Y E+D P+N YGK+K+ EK + S+++I+R+S +G
Sbjct: 104 FLTYLSTDYVFDGKKGLYYEDDFPNPLNQYGKTKLEGEKAVEHCISHWSIIRTSTPFGNH 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
I ++ P+ WI + K + D+ P YV ++ K+I+ +T L
Sbjct: 164 LIK---QTFPL-WIIENIKKNNMLNLIEDQFTTPTYVPNLTKMIIDVTTNNLVG------ 213
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
++ G R+SR A+++A+ S +KPV + + P+D S++++K L
Sbjct: 214 YFHLSGSTRISRYSFAKMIADKLNLDKSFLKPVKMDMMQWKAKRPSDSSLNVSKANSILT 273
Query: 302 IDPV 305
P+
Sbjct: 274 QKPL 277
>gi|112983992|ref|NP_001037747.1| methionine adenosyltransferase 2 subunit beta [Rattus norvegicus]
gi|81883481|sp|Q5U2R0.1|MAT2B_RAT RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|55249791|gb|AAH85899.1| Similar to methionine adenosyltransferase II, beta [Rattus
norvegicus]
gi|149052293|gb|EDM04110.1| rCG33311, isoform CRA_b [Rattus norvegicus]
Length = 334
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|149052294|gb|EDM04111.1| rCG33311, isoform CRA_c [Rattus norvegicus]
Length = 323
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLITGATGLLGRAVYK---EFQQSNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|443650588|ref|ZP_21130491.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159026655|emb|CAO89003.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334661|gb|ELS49161.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 292
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D VA+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLVAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGRNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLRREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|354477489|ref|XP_003500952.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cricetulus griseus]
Length = 323
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQQSNWHTIGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ + L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAASIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTDPPYTEEDIPNPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPRNAQLDCSKL-ETLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|436834739|ref|YP_007319955.1| dTDP-4-dehydrorhamnose reductase [Fibrella aestuarina BUZ 2]
gi|384066152|emb|CCG99362.1| dTDP-4-dehydrorhamnose reductase [Fibrella aestuarina BUZ 2]
Length = 298
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 146/314 (46%), Gaps = 26/314 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVDL 61
K++L+ G G LGQ L+ L+ +P DV T + +L PH+ + + +D+
Sbjct: 2 KKILITGANGLLGQKLVALLAN---QP-DVELTATARGANRL-----PHTDGYTYLAMDI 52
Query: 62 KSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D V GQ PD V++ AA++ CE D D+ + NV + V ++
Sbjct: 53 ---TNRDEVLSVIGQVRPDAVIHGAAMTDVDKCELDKDACWAQNVTA--VEYIVEACRAT 107
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 108 NAFLCHVSTDFIFDGAAGPYTEEAEGNPISFYGWSKYAAEKVVKHSGLRWAIARTVLVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ L G+ + D+ R P D+ AL R ++
Sbjct: 168 --IAHDMSRSNIILWVKKSLEDGKTINVVTDQFRSPTLAEDLAA-GCALIAR-----QEA 219
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + N+ G D ++ +MA A+ SLIKP S+ + + P I K
Sbjct: 220 EGIFNISGSDVLTPYEMAIQTADYFSLDKSLIKPADGSTFRQTARRPPRTGFVIDKARTV 279
Query: 300 LNIDPVTYKDGVKL 313
L +P ++ +G+ +
Sbjct: 280 LGYNPRSFSEGIAV 293
>gi|345329789|ref|XP_001513330.2| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Ornithorhynchus anatinus]
Length = 325
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + S P+ F V+L
Sbjct: 20 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGFSRARPK-----------FEQVNLLD 65
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 66 NNAVRDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVAAS--GNLAKEAAGIGAFL 122
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 123 IYISSDYVFDGTNPPYREDDVPNPLNLYGKTKLEGEKAVLENNVGAAVLRIPVLYG--EV 180
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 181 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPSIKGTY 239
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G P + +D +KL +TL I
Sbjct: 240 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGALRPRNAQLDCSKL-ETLGIA 297
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 298 QRTPFRVGIKESL 310
>gi|440751357|ref|ZP_20930590.1| dTDP-4-dehydrorhamnose reductase [Mariniradius saccharolyticus AK6]
gi|436479999|gb|ELP36264.1| dTDP-4-dehydrorhamnose reductase [Mariniradius saccharolyticus AK6]
Length = 309
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 22/314 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K R+LV G G LGQ L+ L E+E A+ + LP+ A S+ + +
Sbjct: 5 KLRILVTGANGLLGQKLVNALKRDPEVE----LFASGKGESRLPK----AWDGSYHWISI 56
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ S G A QP +++ AA++ CE D + + NV + V L + E
Sbjct: 57 DV-SDKGQVENAFAEIQPHTLIHTAAMTQVDDCEKDKEGCWNANVIA--VANLVAAAEVY 113
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ +H+STD +++G Y E+ + PVN YG SK+AAE+ + + + +AI R+ ++YG
Sbjct: 114 QTHFVHVSTDFIFDGENGPYTEDADPNPVNFYGWSKLAAERLVMKAKTPWAIARTILVYG 173
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ L +G+ ++ +D+ R P D+ + L K
Sbjct: 174 --IAQDMSRSNIILWVKKSLEQGKTIQVVNDQWRTPTLAEDLADGCI------LIAKKGA 225
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ N+ G D ++ QMA + A+ G LI+ ++ + + P I K V+
Sbjct: 226 TGVFNISGKDLLTPYQMAVMTADYFGLDKGLIQESNSRLFTQPAKRPPKTGFIIDKAVRD 285
Query: 300 LNIDPVTYKDGVKL 313
L P ++ DG+ +
Sbjct: 286 LGYAPKSFSDGIGI 299
>gi|425464440|ref|ZP_18843753.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9809]
gi|389833579|emb|CCI21814.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9809]
Length = 292
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A++ F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLAAVRELFQQIKPDAVIHAAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSEHDPVSPVSVYGEQKVAAEKAILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNIPGEQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|425469816|ref|ZP_18848721.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9701]
gi|389880298|emb|CCI38928.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9701]
Length = 292
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q ++++GG +RVSR Q ++A + IKP S V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFNLPKEQIKPCLQSDVPMSAPRPQDVSLD-SSLAFS 272
Query: 300 LNIDPVTYK 308
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|218244985|ref|YP_002370356.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
gi|218165463|gb|ACK64200.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
Length = 294
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 153/308 (49%), Gaps = 28/308 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G +G+LG HL Q + ++V T+ H +P + D L F +D+
Sbjct: 2 KKLLITGASGFLGWHLCQKAQQ----SWEVYGTYFNHKITIPNV--DLLKIDLTNF-LDI 54
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ + +PD +++ AA S P C+ P + IN+ +S VN +++ + E
Sbjct: 55 KT-------CINQLKPDGIIHLAAASKPNYCQIYPQESAKINIEAS-VN-IANLCSDLEI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I STD V++G+ + YKE D ++P++ YG+ KV AE+ + + R +++G
Sbjct: 106 PCIFTSTDLVFDGLNAPYKETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFG-- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP S I + + L +G+++ F DE R PV +L L+ K
Sbjct: 164 LASPTSASF-IDFFINTLKEGKELSLFIDEFRTPVSSSTAADGLL------LALQKASGN 216
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+L++GG +R+SR Q ++A++ G + LI P V D S+D +K +L
Sbjct: 217 ILHLGGKERISRYQFGLLMAQVLGLPSHLITPCQQQDVPMAAPRSPDTSLDSSKAF-SLG 275
Query: 302 IDPVTYKD 309
+P++ K+
Sbjct: 276 YNPLSLKE 283
>gi|410029346|ref|ZP_11279182.1| dTDP-4-dehydrorhamnose reductase [Marinilabilia sp. AK2]
Length = 305
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 22/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDV-DL 61
K+VL+ G G LGQ L+ L + Y+V AT + LP+ D + ++ DV DL
Sbjct: 2 KKVLITGANGLLGQKLVYKLKG--NQRYEVYATGRGKSRLPKEWGDG--YHWLSLDVTDL 57
Query: 62 KSG-SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ FD V +PD +++ AA++ CE + ++ NV + VN L+ E +
Sbjct: 58 EQVIHVFDKV-----KPDFLIHTAAMTHVDECELNQEACELQNVEA--VNNLNQACEKQR 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD ++ G Y E PVN YG +K+ +E+ + +AI R+ ++YG
Sbjct: 111 THFIHLSTDFIFSGADGPYDENAIPDPVNYYGVTKLKSEELLRSSSLKWAIARTVLVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S I W+ + L G+ ++ +D+ R P D+ + + +K+
Sbjct: 170 -IAADMSRSNIILWVKNSLENGKNIQVVNDQWRTPTLAEDLADGCILIM------EKEAT 222
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ N+ G D ++ MA + A+ G SLI+ V ++ + + P I K V L
Sbjct: 223 GVFNISGKDMLTPYDMAMMTADYFGLDKSLIQEVDSTIFTQPAKRPLKTGFIIKKAVNEL 282
Query: 301 NIDPVTYKDGVKL 313
P ++ DG+ +
Sbjct: 283 GYSPKSFTDGIGI 295
>gi|336122430|ref|YP_004577205.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis
IH1]
gi|334856951|gb|AEH07427.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis
IH1]
Length = 304
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + + A N + V ++ + L H+STD V++G
Sbjct: 69 NPDFVVNTAAITNVDLCETEREVAYKTNALA--VKYVGEACKKLNIPLCHISTDYVFDGE 126
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D I P+N YG +K EK + E + +I+R S+ P ISP+ + + W
Sbjct: 127 KGDYIENDRINPINYYGWTKAEGEKILNELNHDLTSIVRISV---PYCISPIKVNF-LMW 182
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ + L +G KV D+ P YV ++++ I+ + +K++ LL+ GG ++VSR
Sbjct: 183 VLNTLKEGNKVNAVIDQWNTPTYVPELMEGIVKI------HEKEVNGLLHFGGGEKVSRY 236
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ A VAEI + LIKP+ +S + PAD S+ K + LNI
Sbjct: 237 EFALKVAEIFDLNKDLIKPIPSSELGWKANRPADTSLISKKSEKLLNI 284
>gi|146304023|ref|YP_001191339.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348]
gi|145702273|gb|ABP95415.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348]
Length = 293
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 149/307 (48%), Gaps = 30/307 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G G LG+ ++Q K Y+V +H + P + F +DL
Sbjct: 2 RVVVTGAGGLLGKRIVQAF-----KDYEVVGVYHRSQ---------PETSPFLVLDL--- 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + ++ PDV+++ AAL+ CE +PD A +NV + + ++ L+
Sbjct: 45 SSLNLRPIEELSPDVIIHAAALTDVDKCEREPDLARLLNV--DVTREIVKVSKRTNAFLV 102
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+EEDE PVNVYG +K+ EK + + S ++R+S YG S
Sbjct: 103 YISTDYVFDGTRGNYREEDETNPVNVYGLTKLEGEKLVRDVDS--LVVRTSTPYGSNPAS 160
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K W+ L GE+V D+ P + ++ D++++ +L+
Sbjct: 161 --GKDNFALWLLKKLKAGERVNALVDQVTSPTLNTNFSLMLREAV------DRRIKGVLH 212
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ G +VSR + + +A G + +LI P + + + P + S++++K +L P
Sbjct: 213 LAGRSQVSRYEFSLALARTFGLNETLINPAHFNEMKWFARRPMNSSLNVSK-AMSLEHKP 271
Query: 305 VTYKDGV 311
++ ++ +
Sbjct: 272 MSLQEAL 278
>gi|313676859|ref|YP_004054855.1| dtdp-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126]
gi|312943557|gb|ADR22747.1| dTDP-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126]
Length = 298
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 18/309 (5%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L++ L G +A LP+ ++F +D+ S
Sbjct: 2 KILITGSNGLLGQKLVK-LIIANGGHELIATARGKNRLPK------ESGYIFESLDITSE 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+V + +PDV++N AA++ CE + + +NV + V L +E +
Sbjct: 55 QEVRSVIMNH-RPDVIINTAAMTNVDQCETEQEDCWKLNVTA--VKHLLKASEACNAFFL 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD +++G Y EE PV+ YG+SK+AAE+ I E ++AI R+ ++YG
Sbjct: 112 QLSTDFIFDGEDGPYTEEAIANPVSYYGESKLAAEQLILESKIDWAIARTVLVYG--IAH 169
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S I W+ L +G+ ++ D+ R P D+ K L L +K+ + + N
Sbjct: 170 DMSRSNIILWVKKSLEEGKDIQVVDDQWRTPTLAEDLAKGCL------LIAEKKAKGIYN 223
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ G D ++ +MA AE + + ++ + + P + K + L P
Sbjct: 224 ISGDDLLTPYEMAVKTAEFFNLPQTSMTKSDSTKFKQTAKRPPKTGFILDKAKRDLGFKP 283
Query: 305 VTYKDGVKL 313
++++G+++
Sbjct: 284 HSFEEGIQV 292
>gi|296482879|tpg|DAA24994.1| TPA: methionine adenosyltransferase 2 subunit beta-like [Bos
taurus]
Length = 334
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 23/316 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG G+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLFGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDTASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKADLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGAHRPRNAQLDCSRL-ETL 303
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|40714032|dbj|BAD06938.1| methionine adenosyltransferase II beta subunit [Mus musculus]
Length = 334
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAEGRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V +G Y EED +P+N+YGK+K+ EK E A+LR ++YG +
Sbjct: 132 IYISSDYVLDGTNPPYTEEDIPSPLNLYGKTKLDGEKAALENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPKNAQLDCSKL-ETLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRTGIKESL 319
>gi|257058009|ref|YP_003135897.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
gi|256588175|gb|ACU99061.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
Length = 294
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 27/294 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G +G+LG HL Q + ++V T+ H+ +P + D L F +D+
Sbjct: 2 KKLLITGASGFLGWHLCQKAQQ----SWEVYGTYFNHNITIPNV--DLLKIDLTNF-LDI 54
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ + +PD +++ AA S P C+ P + IN+ +S+ +++ + E
Sbjct: 55 KT-------CINQLKPDGIIHLAAASKPNYCQIYPQESAKINIEASIN--IANLCSDLEI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I STD V++G+ Y+E D ++P++ YG+ KV AE+ + + R +++GP
Sbjct: 106 PCIFTSTDLVFDGLNPPYQETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGPA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP S I + L +G+++ F DE R PV +L L+ +K
Sbjct: 166 --SPTSASF-IDFFIKTLKEGKELSLFIDEFRTPVSSSTAADGLL------LALEKASGD 216
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+L++GG +R+SR Q ++A++ G + LI P V D S+D +K
Sbjct: 217 ILHLGGKERISRYQFGLLMAQVLGLPSHLITPCQQQDVPMAAPRSPDTSLDSSK 270
>gi|327260693|ref|XP_003215168.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Anolis carolinensis]
Length = 334
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 155/313 (49%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + ++ +S P +F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFKENRWNAVGCGYSRARP-----------LFEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+++CAA P V ++ PD+A +NV +S ++ L
Sbjct: 75 ATAVHNLIQGF-QPHVIIHCAAERRPDVVDSQPDAASRLNVVAS--GNIAKEAAQVRAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G YKE D P+N+YG++K+ EK + + + A+LR I+YG +
Sbjct: 132 VYISTDYVFDGTDPPYKENDVPNPLNLYGRTKLEGEKAVLQNNKDAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L + + ++ ++
Sbjct: 190 ERLDESAVTVIFDKVQFNNKSANMDHWQQRFPTYVKDVASVCRQLAEKRM-QNPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ V G P + +D ++L + L I+
Sbjct: 249 HWSGNEQLTKFEMARAMADAFNLPSSHLRPITDGPV-VGALRPKNAQLDCSRL-RMLGIE 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QHTPFRVGIKESL 319
>gi|166366805|ref|YP_001659078.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa NIES-843]
gi|166089178|dbj|BAG03886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa NIES-843]
Length = 292
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSENDTVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q ++++GG +RVSR Q ++A + S IKP V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFNISIEQIKPCLQCDVPMIAPRPQDVSLD-SSLAFS 272
Query: 300 LNIDPVTYK 308
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|434406333|ref|YP_007149218.1| dTDP-4-dehydrorhamnose reductase [Cylindrospermum stagnale PCC
7417]
gi|428260588|gb|AFZ26538.1| dTDP-4-dehydrorhamnose reductase [Cylindrospermum stagnale PCC
7417]
Length = 290
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 29/307 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K++L+ G +G+LG HL Q L++ E + Y +H+ P ++L V+L
Sbjct: 2 KKLLITGASGFLGWHLCQ-LAKEEWEVYGTYFSHYLEIPGVKML-----------KVNLT 49
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
++ + QP V++ AA S P C+ P + INV +S ++ +
Sbjct: 50 DFQELKSIFSQI-QPAAVIHTAAQSQPNYCQLHPQESYIINVTASCN--IAGLCADYGIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
STD V++G+ + Y+E D + PVN+YG+ KV AE+ + K A+ R +++G +T
Sbjct: 107 CAFTSTDLVFDGLNAPYRETDIVCPVNIYGEQKVQAEQGMLAKYPLTAVCRMPLMFGRET 166
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P KS IQ +L +G+++ F DE R PV VK ++LAL +++
Sbjct: 167 --PTAKSF-IQSFIQILKEGKELSLFIDEFRTPVSATTAVKGLLLAL--------EKVNG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+++GG +R+SR +++AE +K V P D+S+D ++ L
Sbjct: 216 CIHLGGKERISRYDFGQLLAEAFQLPIEKLKSCRQEDVKMAAPRPTDVSLDSSQAF-ALG 274
Query: 302 IDPVTYK 308
P++ K
Sbjct: 275 YQPLSIK 281
>gi|425448951|ref|ZP_18828795.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
7941]
gi|389766615|emb|CCI07787.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
7941]
Length = 292
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 33/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +I+G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLIFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V N L +++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAV-------NGLLFALEKV 213
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFKLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAFS 272
Query: 300 LNIDPVTYK 308
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|406662690|ref|ZP_11070779.1| dTDP-4-dehydrorhamnose reductase [Cecembia lonarensis LW9]
gi|405553312|gb|EKB48580.1| dTDP-4-dehydrorhamnose reductase [Cecembia lonarensis LW9]
Length = 305
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 22/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K+VL+ G G LGQ L+ L E Y V AT + LP + F + +D+
Sbjct: 2 KKVLITGANGLLGQKLVFKLKE--ESTYQVFATGRGESRLP----NEWGTGFKWESLDV- 54
Query: 63 SGSGFDAVALKF--GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ D V F +PD +++ AA++ CE +P++ NV + V L E
Sbjct: 55 --TDLDEVLAIFEKNKPDFLIHTAAMTNVDECELNPEACDVQNVNA--VQNLIDACEVHR 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD ++ G + Y E+ PVN YG SK+ +E + +AI+R+ ++YG
Sbjct: 111 THFIHLSTDFIFSGAEGPYDEDALPDPVNYYGSSKLKSEMLVRSSNLKWAIVRTVLVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S I W+ L G+ ++ +D+ R P D+ + L +K+
Sbjct: 170 -IAADMSRSNIILWVKKSLENGKSIQVVNDQWRTPTLAEDLADGCILLM------EKEAT 222
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ N+ G D ++ +MA + A+ G + SLI+ V ++ + + P I K + L
Sbjct: 223 GVFNISGKDMLTPYEMAILTADYFGLNKSLIQEVDSTVFTQPAKRPLKTGFIIKKAMNEL 282
Query: 301 NIDPVTYKDGVKL 313
P ++ DG+ +
Sbjct: 283 GYSPKSFTDGIGI 295
>gi|425437250|ref|ZP_18817673.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9432]
gi|389677822|emb|CCH93286.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9432]
Length = 292
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|440755743|ref|ZP_20934945.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
gi|440175949|gb|ELP55318.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
Length = 292
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKEVFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|425446654|ref|ZP_18826656.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9443]
gi|389733044|emb|CCI03140.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9443]
Length = 292
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASDAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPRQQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSNK 281
>gi|389860502|ref|YP_006362741.1| dTDP-4-dehydrorhamnose reductase [Thermogladius cellulolyticus
1633]
gi|388525405|gb|AFK50603.1| dTDP-4-dehydrorhamnose reductase [Thermogladius cellulolyticus
1633]
Length = 298
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 151/298 (50%), Gaps = 23/298 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV GGTG LG L+ L E + ++V AT+H+T P + + + +V FD ++
Sbjct: 3 RVLVTGGTGLLGWSLVNRLVE---RGFEVYATYHATRPP--VAEGVKWVWVDFDDPHEAR 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+++ +P+VVV+ AA + CE + A+++N S+ L++ +
Sbjct: 58 PLVESL-----RPEVVVHAAAYTDVDGCEANKLLALNVNYVST--RELATACRGVCKYFV 110
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y+E D P+N YG +K+ E + + +LR+S +YG S
Sbjct: 111 YISTDYVFDGEKGLYREGDPPNPLNYYGLTKLMGEIAVAANLEYYLVLRTSGLYG---CS 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P K LS+G+ VE F D+ P Y D+ I L + + + L+
Sbjct: 168 PGGKRGFALDALGKLSRGQVVEAFVDQFLSPTYAPDLADAITRLL------EGRPRGFLH 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
V G +RVSR + A +A + G S L+KP S +S + P D S+D + L +++ +
Sbjct: 222 VAG-ERVSRYEFAVELARVLGVSEDLVKPTSIASAVLRARRPRDSSLD-SSLARSMGV 277
>gi|422302212|ref|ZP_16389575.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9806]
gi|389788681|emb|CCI15591.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9806]
Length = 292
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 33/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEVINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSESDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q ++++GG +RVSR Q ++A + IKP S V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFNLPKEQIKPCLQSDVPMSAPRPQDVSLD-SSLAFS 272
Query: 300 LNIDPVTYK 308
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|425440546|ref|ZP_18820845.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9717]
gi|389719001|emb|CCH97111.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9717]
Length = 292
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G+LG H+ Q + + Y + + H+ D +L
Sbjct: 2 KRLLITGVSGFLGWHIYQ-----KTRSYWASFGTY-----------FNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHAAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D + PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVFPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+Q ++++GG +RVSR Q ++A + IKP P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNIPREQIKPCLQCDFPMIAPRPQDVSLD-SSLAF 271
Query: 299 TLNIDPVTYK 308
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|126290739|ref|XP_001370026.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Monodelphis domestica]
Length = 323
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 18 RRALITGATGLLGRAVYK---EFEKNNWHAVGCGYSRARPR-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ S ++PV+ S V G P + ++ +KL + L I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPNSHLRPVTDSPV-LGAPRPRNAQLNCSKL-ENLGIG 295
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 296 QRTPFRVGIKESL 308
>gi|126290742|ref|XP_001369996.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Monodelphis domestica]
Length = 334
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 29 RRALITGATGLLGRAVYK---EFEKNNWHAVGCGYSRARPR-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ S ++PV+ S V G P + ++ +KL + L I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPNSHLRPVTDSPV-LGAPRPRNAQLNCSKL-ENLGIG 306
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 307 QRTPFRVGIKESL 319
>gi|449475207|ref|XP_002189542.2| PREDICTED: methionine adenosyltransferase 2 subunit beta
[Taeniopygia guttata]
Length = 369
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 31/317 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDALPHSFVFFDV 59
+RVL+ G TG LG+ + + +E ++ + P+ LLD + + D
Sbjct: 64 RRVLITGATGLLGRAVFKEFNE---NNWNTVGCGYRRAQPRFEHVNLLDCIAVHDIIHDF 120
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V E PD+A +NV +S L+
Sbjct: 121 ----------------QPHVIVHCAAERRPDVVEGQPDAASQLNVAASAN--LAKEAAGV 162
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 163 GAFLIYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEETAVLRIPVLYG 222
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P V+DV + L + + D +
Sbjct: 223 --EVERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAAVCRQLAEKRML-DPSI 279
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G +++++ +MA +A+ +S ++P++ S V G P + +D +KL +
Sbjct: 280 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-VGALRPKNAQLDCSKL-EM 337
Query: 300 LNIDPVT-YKDGVKLTL 315
L I T ++ G++ +L
Sbjct: 338 LGIGQRTPFRAGIRESL 354
>gi|449267237|gb|EMC78203.1| Methionine adenosyltransferase 2 subunit beta, partial [Columba
livia]
Length = 313
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 25/314 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVLV G TG LG+ + + +E Q+ LLD++ + D
Sbjct: 8 RRVLVTGATGLLGRAVFKEFNENNWNAVGCGYRRAQPRFEQINLLDSIAVHDIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V E+ PD+A +NV +S L+
Sbjct: 65 -------------QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGVGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++STD V++G YKE D P+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 110 LIYISTDYVFDGTSPPYKESDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPILYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P V+DV + L + + D ++
Sbjct: 168 VERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAAVCRQLAEKRML-DPSVKGT 226
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ V G P + +D ++L + L I
Sbjct: 227 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDCPV-VGALRPRNAQLDCSRL-EMLGI 284
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 285 GQRTPFRAGIKESL 298
>gi|443325201|ref|ZP_21053907.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
gi|442795179|gb|ELS04560.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
Length = 293
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 34/311 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++LV G +G+LG +L Q S E+ G Y A L Q VD
Sbjct: 2 KKLLVTGASGFLGWNLCQEASAKWEVFGAYYSHAVKIAGVTLSQ--------------VD 47
Query: 61 LKSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L+ ++ + F +PD V++ AA S P C+ +P + INV +S VN ++
Sbjct: 48 LRE---YEQLKELFSAIKPDAVIHSAAASKPNYCQQNPQESYEINVTAS-VN-IAKLCAE 102
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ STD V++G SFY+E D + P+ +YG+ KV AE+ + +I R +++
Sbjct: 103 YQIPCAFTSTDLVFDGQGSFYQESDRVCPICIYGEQKVLAEQKMLSVYPKVSICRMPLMF 162
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G SPV S +Q S L G+++ F DE R P I A L+ +KQ
Sbjct: 163 G--LPSPVANSF-LQGFISSLKAGQELNLFVDEFRTP------ASAIAAAQGLLLAIEKQ 213
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ +L++GG +RVSR + ++AE+ LI+ S + D S++ K
Sbjct: 214 VSGILHLGGRERVSRYEFGLLLAEVMQLPKELIRSGKQSDIVMIAPRSPDTSLNSNKAF- 272
Query: 299 TLNIDPVTYKD 309
L +P+ K+
Sbjct: 273 ALGYNPLPLKE 283
>gi|427728210|ref|YP_007074447.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
gi|427364129|gb|AFY46850.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
Length = 294
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 31/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
+++L+ G +G+LG HL Q I + + V T+ H +P + L ++L
Sbjct: 2 RKLLITGASGFLGWHLCQ----IAKQNWQVYGTYCSHDLEIPGINL---------IKLNL 48
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + + QPD V++ AA S P C+ P+ + +NV +S ++ + +
Sbjct: 49 TDFAELKQIFQEI-QPDAVIHTAARSQPNFCQTHPEESHLVNVIASCN--IAGLCADYQI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
STD V++G+ + YKE D + PVN+YG+ KV AE + E+ A+ R +++G
Sbjct: 106 PCAFTSTDLVFDGLNAPYKETDAVCPVNIYGEQKVLAEIGMLERYPMTAVCRMPLMFGNA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P S IQ +L+ G+++ F DE R P + ++LAL +++
Sbjct: 166 T--PTATSF-IQPFIEILTAGKELNLFIDEFRTPASADTAAQGLLLAL--------EKVH 214
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++++GG +R+SR ++ E+ + +K V PAD+S+D ++ L
Sbjct: 215 GIIHLGGKERISRYDFGRLLVEVFQLPETGLKGCRQQDVKMAAPRPADVSLDSSQAF-IL 273
Query: 301 NIDPVTYKD 309
P++ K+
Sbjct: 274 GYKPLSIKE 282
>gi|345007358|ref|YP_004810210.1| dTDP-4-dehydrorhamnose reductase [halophilic archaeon DL31]
gi|344322984|gb|AEN07837.1| dTDP-4-dehydrorhamnose reductase [halophilic archaeon DL31]
Length = 296
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 146/311 (46%), Gaps = 26/311 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LVVG G LG ++++ E + + + +A T+HST P + P +DL
Sbjct: 2 RLLVVGANGLLGSNVVR---EGQQRGWSIAGTYHST-QPAFEIPLTP-------LDLGES 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
FD + L PDVVVNCAA++ CE DP+SA S+N P ++ ++ +
Sbjct: 51 DTFDDI-LDRHDPDVVVNCAAMTDVDGCETDPESAHSLNGDAPGTIAAQCAA----RGIE 105
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H+STD V++G + Y E + PV VYG+SK A E+ + E+ + + R S ++G
Sbjct: 106 FVHVSTDYVFDGTERDPYSESADPNPVQVYGESKFAGERAVREEVPDALVARLSFVWGIH 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
P W+ L GE V F D+ P + +L L +++D
Sbjct: 166 RSRGDLTGFPA-WVRDRLQAGEDVPLFTDQWVTPTRAGQAAETLLDL----IAQDAGG-- 218
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
L++V V+ + +AE G L+ S + V+R P +D+ + TL+
Sbjct: 219 LVHVACSSCVTPYEFGAEIAEHVGADEELLSEGSMADVERDAPRPTYSCLDVGTVESTLD 278
Query: 302 IDPVTYKDGVK 312
T ++ ++
Sbjct: 279 RPQPTLREDIE 289
>gi|193214981|ref|YP_001996180.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
gi|193088458|gb|ACF13733.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
Length = 300
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 145/304 (47%), Gaps = 25/304 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV----FFDVD 60
+VL+ G +G LG ++L+ + K D+ T ++P +F +D
Sbjct: 3 KVLLTGASGLLGGNILK--HALANKTLDILPTRLGGDF------SVPEAFRGDKEILPLD 54
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++S + + ++ +P+V+++ AALS P CE ++A +IN + V +++ E+
Sbjct: 55 IRSQTWLWNIISQW-KPEVIIHTAALSEPGACEWQRETAEAINTRA--VKFIADLCEHFG 111
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG- 179
LI +STD V++G K Y E D P+N Y ++K AE+ + ++ ILR+S++ G
Sbjct: 112 IRLIFISTDLVFDGTKGDYLETDPPNPLNFYAETKCRAEEIVASSLHDYVILRTSLLLGA 171
Query: 180 -PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
PQ++ + + L G+ + FF DE R P+ + I L L + ++
Sbjct: 172 SPQSLRSLDERLKADG-----EAGKTMTFFTDEYRNPIAASVLADITLKLAS---GNNRS 223
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ L + G D+VSR ++ E + + G S K V V P D S+ L+
Sbjct: 224 VTGLFHAAGKDKVSRFELGEKLCQKYGISRQFYKGARQDEVTLSVPRPKDTSLISDALLT 283
Query: 299 TLNI 302
+N
Sbjct: 284 VMNF 287
>gi|118431352|ref|NP_147762.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1]
gi|116062675|dbj|BAA80165.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 162/311 (52%), Gaps = 27/311 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV GGTG LG +L+Q L + K Y V T++ P L A + V+L+
Sbjct: 2 KLLVTGGTGLLGYNLVQQLLK---KGYSVYPTYNKNT-PFKLAGAR-----WSKVNLEDP 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + + +PD V++ AA + CE + A IN +S+ ++ +LLI
Sbjct: 53 SQLTQL-FRDIKPDAVIHTAAYTDVDGCELHRERAYRINFLASMT--VARLAARHGSLLI 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC--SNFAILRSSIIYGPQT 182
++STD V++G K Y+EE+ P+N YG SK+ E N ++R S +YG
Sbjct: 110 YVSTDYVFDGDKGMYREEEAPNPINYYGLSKLLGEVATLSAMDKENVLVVRVSGLYG--- 166
Query: 183 ISPVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP K + I ++ +L +GE+V F+D+ P Y + + ++ + R +++
Sbjct: 167 YSPTGKRNFGINVLEKLL-RGEEVRAFYDQYLSPTYTYFLSRRLIDVLER------EIRG 219
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+L++ G +R+SR++ A+++A++ G LIKP+S + + P D S+D T + + L
Sbjct: 220 VLHLAG-ERLSRLEFAQLIAKVLGADAELIKPISMKEANLPARRPRDSSLDTT-MAKKLG 277
Query: 302 IDPVTYKDGVK 312
++ + ++ VK
Sbjct: 278 LELPSQEESVK 288
>gi|448639551|ref|ZP_21676798.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
gi|445762672|gb|EMA13891.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
Length = 314
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
++LVVG G LG ++++ + + ++V T+HST PL Q
Sbjct: 20 QLLVVGANGLLGSNVVRAGQQ---RGWNVRGTYHSTRPEFDIPLTQF------------- 63
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFT 116
DL+ FD++ L PDVVVNCAA++ CE +P+ A +N P L ++
Sbjct: 64 -DLREYDSFDSI-LTEHDPDVVVNCAAMTDVDECETNPEQAHVLNGDAPGKL----ATHC 117
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+H+STD V++G + Y E + PV VYG+SK+A E+ + E+ ++ + R S
Sbjct: 118 NVNGIEFVHVSTDYVFDGTRREPYSESADTNPVQVYGESKLAGEQEVIEETTDALVARLS 177
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++G S P W+ S L GE + F D+ P K +L L
Sbjct: 178 FVWGIHRSSNDLTGFPA-WVRSQLLSGENIPLFTDQWVTPTRAGQAAKTLLDLI------ 230
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
++ L ++ + + EV+A+ S L+ S VDR PA +D+
Sbjct: 231 EQDATGLFHIACSSCATPYEFGEVIADHVDVSEELLSEGSMDDVDRDATRPAYTCLDVEN 290
Query: 296 LVQTLNIDPVTYKDGVKLTLAA 317
+ L+ T ++ ++ A
Sbjct: 291 VESELDRPQPTLREDAEVVWNA 312
>gi|363739065|ref|XP_414497.3| PREDICTED: methionine adenosyltransferase 2 subunit beta [Gallus
gallus]
Length = 321
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + +E ++ + P+ F V+L +
Sbjct: 16 RRVLITGATGLLGRAVFKEFNE---NNWNAVGCGYRRAQPK-----------FEQVNLLN 61
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 62 SVAVHDIIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGIGAFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 119 IYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 177 ERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKRML-DPSIKGTF 235
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ V G P + +D +KL + L I
Sbjct: 236 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDCPV-VGALRPRNAQLDCSKL-EMLGIG 293
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 294 QRTPFRAGIKESL 306
>gi|376007543|ref|ZP_09784738.1| putative dTDP-4-dehydrorhamnose reductase, rmlD-like [Arthrospira
sp. PCC 8005]
gi|375324179|emb|CCE20491.1| putative dTDP-4-dehydrorhamnose reductase, rmlD-like [Arthrospira
sp. PCC 8005]
Length = 293
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ + F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSEWEVYGTYNSSPV-------IESGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P CE +PD + INV ++ ++S
Sbjct: 52 LGDLKQVWEEI-KPDAVIHAAAASKPNFCEENPDISHKINVVAA--GDIASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINTYGEQKVKAEGEILARYPKAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S IQ L G + F DE R PV + + +L L+ +K++ +L
Sbjct: 167 SPHGGSF-IQGFIKTLKSGNCLNLFEDEFRTPVSGKTAARGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
++GG R+SR + ++A++ I P V D S+D
Sbjct: 220 HLGGKQRISRYEFGLLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLD 268
>gi|326928318|ref|XP_003210327.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Meleagris gallopavo]
Length = 342
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + +E ++ + P+ F V+L +
Sbjct: 37 RRVLITGATGLLGRAVFKEFNE---NNWNAVGCGYRRAQPK-----------FEQVNLLN 82
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 83 SVAVHDIIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGIGAFL 139
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 140 IYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG--EV 197
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 198 ERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKRML-DPSIKGTF 256
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +MA +A+ +S ++P++ V G P + +D +KL + L I
Sbjct: 257 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDCPV-VGALRPRNAQLDCSKL-EMLGIG 314
Query: 304 PVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 315 QRTPFRAGIKESL 327
>gi|427719470|ref|YP_007067464.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 7507]
gi|427351906|gb|AFY34630.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 7507]
Length = 294
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 147/307 (47%), Gaps = 27/307 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG H+ Q I + ++V T+ S + + L + F +LK
Sbjct: 2 QKLLITGASGFLGWHICQ----ITKQEWEVYGTYLSHSIEIAGMKTLKANLTDFQ-ELKR 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ PD V++ AA S P C+ P + +INV +S ++ +
Sbjct: 57 -------IFRDINPDAVIHTAAQSQPNFCQTHPQESQAINVTASCD--IAGLCADYSIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ + Y+E D + P+N+YG+ KV AE + E+ A+ R +++G T
Sbjct: 108 VFTSTDLVFDGLNAPYRETDPVCPINLYGEQKVMAEVGMLERYPQTAVCRMPLMFGMAT- 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
P S IQ L G+++ F DE R PV + I+LAL +++
Sbjct: 167 -PTASSF-IQPFIQTLETGKELNLFIDEFRTPVSATTASQGILLAL--------EKVNGY 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+++GG +R+SR +++ EI + ++ V P D+S+D +K + L
Sbjct: 217 IHLGGKERISRYHFGQLLVEIFQLPVTNLQACRQQDVKMAAPRPPDVSLDSSKAFE-LGY 275
Query: 303 DPVTYKD 309
P++ +
Sbjct: 276 KPLSLRQ 282
>gi|193216392|ref|YP_001997591.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
gi|193089869|gb|ACF15144.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
Length = 307
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 21/286 (7%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVD 60
S KRVL+ G G LGQ L + + YD+ AT TP Q SF F +D
Sbjct: 4 SYKRVLITGANGLLGQKLTDCFAA--DRAYDLLATARQPTPYNQ------TASFGFISLD 55
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F +P+ +VN A + CE + D NV + V L++ +
Sbjct: 56 MLDRQAVKELVWNF-EPNFIVNAGAYTNVDGCEKEKDLCWKGNVIA--VENLAAAARLVK 112
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
++H+STD +++G Y E + P++ YG+SK+A+E + ++AI+R+ ++YG
Sbjct: 113 AQVVHVSTDYIFDGKNGPYDEAQQPNPLSYYGRSKLASENVLRNSGEHWAIIRTMVVYG- 171
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ K+ + W+ L G++V D+ D+ + I L N K
Sbjct: 172 -VAAQCKKNFAL-WLAGELKAGKQVRIVDDQFGNTTLADDLARGIYMLVN------KAKH 223
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ N+ G D VSR + A +AE+ G+ +LI P+ + + + + P
Sbjct: 224 GVYNMVGGDNVSRYEFALRLAEVFGFDKNLITPIKTADLSQLAERP 269
>gi|296242300|ref|YP_003649787.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM
11486]
gi|296094884|gb|ADG90835.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM
11486]
Length = 306
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 146/303 (48%), Gaps = 26/303 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV GGTG LG + + S K + V AT++ P L + ++L+
Sbjct: 10 RVLVTGGTGLLGYWIAETYSS---KGFKVYATYNEKNPPGL-------EAAWIKLNLEDP 59
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+V + +PD++V+ AA + CE + + A +N L + + + I
Sbjct: 60 ESIISVVREV-RPDIIVHSAAYTDVDGCEVNKEKAYRVNY---LGTEALARAGRETDYFI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
++STD V+ G K Y+EED APVN YG SK+ E + N I+R S +YG
Sbjct: 116 YVSTDYVFNGEKGLYREEDTPAPVNYYGLSKLLGEVAVRAILPKNSVIVRVSGLYG---Y 172
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP K + L +GE VE F D+ P Y R + +I+ L D + +L
Sbjct: 173 SPTGKKNFGVIVLERLLRGENVEAFIDQWLSPTYTRFLSEILAKLV------DTKPTGVL 226
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
++ G +R+SR + A + AE+ G +L+KP SV+ + P D S++ K V L++
Sbjct: 227 HIAG-ERLSRYEFARLFAEVLGVGENLVKPRPLESVNLPARRPRDSSLNTAKARVLGLSL 285
Query: 303 DPV 305
PV
Sbjct: 286 PPV 288
>gi|410939649|ref|ZP_11371476.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira noguchii str.
2006001870]
gi|410785517|gb|EKR74481.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira noguchii str.
2006001870]
Length = 295
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 37/318 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +L+ G +G LG HL + E Y V A + L + +D + ++D
Sbjct: 1 MNSNTILITGASGLLGHHLSKFFLE---NGYKVIALRKAHSLGIVGIDEI-------EID 50
Query: 61 LKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L FD V L +P+ +++ A L+ CE + A I++ S V ++
Sbjct: 51 LLD---FDTVKNLLTKIRPNYIIHSAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQ 105
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G E+ + PVNVYGK+K +E + S ILR++ +
Sbjct: 106 INSKMIHISTDHLWDGTMQMVTEDVPVCPVNVYGKTKAESEHAVLAVNSEALILRTN-FF 164
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ E + F+D P+ + + ++IL+L
Sbjct: 165 GPGLQWRQSLS--------DWIINSLNRNESINTFYDVFFTPISIYHLARVILSLI---- 212
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
K+ + + + G +R+S+ A +A+ ST LI+P+S + P D+S+
Sbjct: 213 --QKKTKGIYHTVGSERISKYHFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLST 270
Query: 294 TKLVQTLNIDPVTYKDGV 311
K+V LN T + G+
Sbjct: 271 DKVVGFLNTSMPTIQAGI 288
>gi|423063931|ref|ZP_17052721.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|406714595|gb|EKD09757.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 291
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 39/302 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDALPHSFVFFDVDL 61
+L+VG +G +G HL+ + + ++V T+H P L + DA
Sbjct: 3 ILIVGASGLVGSHLVMACQQ---RGWNVVGTYHQFEQPHLKPLKITDA------------ 47
Query: 62 KSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DAV ++ QP VV A S CE +P+ INV SL N S E
Sbjct: 48 ------DAVQALIRETQPQVVFLPAFRSNVDYCEQNPEETYQINVVGSL-NVAKSCKEVD 100
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+ + S+D V+ G Y+E DE P+ VYG+ K+ E+ I + +N+ ILR +++YG
Sbjct: 101 AKLVFY-SSDYVFNGEAGPYREVDEPEPICVYGRQKLEVEQQIAQLMTNYLILRVTVVYG 159
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ K+ I+ I S L G+ + D+ P V D+ + L ++
Sbjct: 160 HEAQG---KNFLIRLI-STLQNGQMIRVPEDQVGSPTLVDDIAEASCRLIEAGVTG---- 211
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
L +V GPD +SR + + VAE+ G I PV S +++ + P M +LV+T
Sbjct: 212 --LFHVAGPDVMSRYEFSLTVAELLGLERDNILPVITSELEQLAKRPLKAGMVCDRLVET 269
Query: 300 LN 301
+N
Sbjct: 270 IN 271
>gi|344241545|gb|EGV97648.1| Hyaluronan mediated motility receptor [Cricetulus griseus]
Length = 843
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 538 RRVLVTGATGLLGRAVYK---EFQQSNWHTIGCGFRRARPK-----------FEQVNLLD 583
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKEN 121
+ F QP V+V+CAA P V E+ PD+A +NV +S L +S
Sbjct: 584 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAASIG----A 638
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LI++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 639 FLIYISSDYVFDGTDPPYTEEDIPNPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGE- 697
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 698 -VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKG 755
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL
Sbjct: 756 TFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVI-GAQRPRNAQLDCSKL-ETLG 813
Query: 302 IDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 814 IGQRTPFRIGIKESL 828
>gi|390438373|ref|ZP_10226849.1| Genome sequencing data, contig C275 [Microcystis sp. T1-4]
gi|389838224|emb|CCI30973.1| Genome sequencing data, contig C275 [Microcystis sp. T1-4]
Length = 292
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 151/307 (49%), Gaps = 29/307 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ V+L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KVNLT 49
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + +PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 50 DLAAVKEIFQRI-KPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYHIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G + Y E ++PV+VYG+ KVAAEK I AI R +++G +
Sbjct: 107 LVFTSTDLVFDGKNAPYSEHGPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG--S 164
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
SP S +Q L +G+++ F DE R V V V ++LAL +++Q
Sbjct: 165 PSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EKVQG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
++++GG +RVSR Q ++A + IKP S V P D+S+D + L +L
Sbjct: 216 IIHLGGKERVSRYQFGLLMAAVFNIPREQIKPCLQSDVPMSAPRPQDVSLD-SSLAFSLG 274
Query: 302 IDPVTYK 308
P++ K
Sbjct: 275 YQPLSIK 281
>gi|309789989|ref|ZP_07684565.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG-6]
gi|308228009|gb|EFO81661.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6]
Length = 293
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 155/315 (49%), Gaps = 39/315 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+R+ + GGTGYLG LL+ ++E + V A++ H P A P + + +DL+
Sbjct: 3 ERIFITGGTGYLGTALLR---QLELRAAHVGASYLHQPP------TAFP-NVAWVRMDLR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A+ F QP +++ A + +PD S L+ +++ +
Sbjct: 53 EPEEVRAILHAF-QPTAIIHTA------FVQYEPDLLAITGYGSGLIAEIAASLGAR--- 102
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+S+D +++G ++ Y E D P++ YG++K AE+ + ++R+S+IYG
Sbjct: 103 LIHMSSDVIFDGERTGPYTENDAPNPISAYGEAKALAERLVQAAYPAATLVRTSLIYG-- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P+ + ++ + + F DE RCP++V D+ ++ L N +
Sbjct: 161 -FAPIDRQ--TRFALEIAAGQRSDRLFSDEYRCPIFVDDLAAALIELLN------TEHTG 211
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+LN+ G +RVSR ++ ++A+ GY+ I+ + S + V+ P + S+DI++ L+
Sbjct: 212 VLNIAGAERVSRYELGCLLAQALGYNPDQIQ--AGRSAELPVRRPRNCSLDISRAQALLH 269
Query: 302 IDPVTYKDGVKLTLA 316
T GV+ LA
Sbjct: 270 ----TRLRGVREVLA 280
>gi|149278594|ref|ZP_01884730.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
gi|149230589|gb|EDM35972.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
Length = 304
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 18/310 (5%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LGQ + + L E + +A+ P + + + ++D+
Sbjct: 2 KTILVTGSNGLLGQKITERLLETQQFKL-IASAKGENRYP------VKEGYTYVEMDILD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ V ++ +PD +++ AA++ CE+ + A +NV + V L + E L
Sbjct: 55 PANVKEV-IETHKPDAIIHTAAMTNVDTCEDQKELAHELNVTA--VETLLANCEPHNIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+HLSTD +++G Y E P++ YG +K+ AE+ I +AILR+ I+YG +
Sbjct: 112 VHLSTDFIFDGADGPYDELAAPNPLSYYGITKLEAEEVIKNSKCRWAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + +S + W L KG + +D+ R P D+ L L+ +
Sbjct: 170 SDMSRSNIVLWAKGALEKGNPINVVNDQWRMPTLADDLADCCL------LAVQHDAHGVF 223
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G D +S ++ VA+ SLI +SA ++++ + P + K ++ L
Sbjct: 224 NASGKDMMSISELVGRVADYWKLDKSLINEISAETLNQTAKRPVRTGFILDKTIRELGYQ 283
Query: 304 PVTYKDGVKL 313
P ++ +G+ +
Sbjct: 284 PRSFAEGLAI 293
>gi|119486569|ref|ZP_01620619.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
gi|119456186|gb|EAW37318.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
Length = 291
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 25/306 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG ++ Q I ++V T+ S + +P + DL
Sbjct: 2 KKILVTGASGFLGWNICQ----IAASQWEVYGTYRSKAV------KIPGVNII-QRDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G A+ + QP +++ AA S P C+ PD INV +S+ L+ +
Sbjct: 51 FQGLKALIEEI-QPTAIIHAAAQSKPNYCQLHPDETYPINVTASIN--LAGLCADYSIAC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
STD V+ G+ YKE D ++PV++YG+ KVAAE+ + E+ A+ R +++G
Sbjct: 108 AFTSTDLVFNGLNPPYKETDPVSPVSIYGEQKVAAEQGMLERNPQVAVCRMPLMFG--KA 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S IQ L G++++ F DE R V + +L + + +L
Sbjct: 166 SPHAVSF-IQGFVQALKAGKELQVFTDEYRTSVSGTTAAEGLLLAL-------AKAKGIL 217
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++GG +R+SR A+++AE+ I+P V P D+S+D +K L
Sbjct: 218 HLGGKERMSRYDFAQLMAEVFELPIEKIQPCLQQDVQMPASRPPDVSLDSSKAF-GLGYQ 276
Query: 304 PVTYKD 309
P++ ++
Sbjct: 277 PLSIRE 282
>gi|148508211|gb|ABQ75999.1| predicted dTDP-4-dehydrorhamnose reductase [uncultured
haloarchaeon]
Length = 290
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 31/298 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++GG+G +G +++Q E E +V ATH+++P + +D
Sbjct: 2 RLLIIGGSGLVGSNIVQ---EAETNDIEVYATHNTSP----------SEYTEISLDKTDQ 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+A + PDV+++ AA CE + + A ++N + +++ + I
Sbjct: 49 ERTKAIAEEV-DPDVIIDTAAYHAVDDCETNREHAWTVNAAGTKNAAVAASSVGAH--YI 105
Query: 125 HLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+LSTD V+ G KS Y E+D ++PVN Y ++K A E+ S+ ILR S++YG
Sbjct: 106 YLSTDYVFLGNKSDTPYSEDDPVSPVNYYAETKYAGER-ASRIVSDATILRPSVVYG--- 161
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + W L GE++ +D+ Y D+ + +A+ + L+ L
Sbjct: 162 ---LAGNNFTTWALGELESGEEINIVNDQFSTTTYAPDLAQACVAVAKKGLTG------L 212
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ GP R SR Q +AE Y SL+ P++ + P D S+D ++L ++
Sbjct: 213 YHAAGPVRQSRFQFTRQLAEAFDYDPSLVTPITTEEFGQDAPRPTDGSLDSSRLYNSI 270
>gi|318065111|ref|NP_001188160.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus]
gi|308323562|gb|ADO28917.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus]
Length = 322
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 28/315 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + ++V ++ P+ F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQNNDWEVLGCGYTRARPR-----------FLSCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AV F QP V+V+CAA P V E+ ++A+++NV + + E L
Sbjct: 64 EEAVRAVIHNF-QPHVIVHCAAERRPDVVEHHTEAALNLNVHACA----TLAKEAAGIFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y D P+N+YGKSK+ E+ I C AILR I+YG +
Sbjct: 119 IYISTDYVFDGRNPPYGGNDTPNPLNMYGKSKLKGEEEILRHCPGAAILRVPILYG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-- 241
V +S D + E H + R P Y DV WL + + L
Sbjct: 177 EKVEESAVTVLWDCIQEGAESSTVDHCQQRFPTYTSDV----HVSAGIWLIDVSGLILHG 232
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTL 300
+ + G +++++ ++A +A+ S + P++ G Q P + ++ ++L + L
Sbjct: 233 IFHYSGKEQMTKYEIACAIADAFNLPRSHLIPLTEQPAGAGAQRPQNAQLECSRLDLLGL 292
Query: 301 NIDPVTYKDGVKLTL 315
+++P +K ++ L
Sbjct: 293 SVEPTPFKTAIRNCL 307
>gi|345569802|gb|EGX52628.1| hypothetical protein AOL_s00007g411 [Arthrobotrys oligospora ATCC
24927]
Length = 298
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 29/313 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+KK+VLV G TG LG+ +++ E +DV T S P +L +D
Sbjct: 1 MAKKKVLVTGATGLLGRQVVRAFDEAG---WDVIGTGFSRANPPRILK----------LD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + V L +P ++++CAA P C +DPD ++NV +S + L+ T +
Sbjct: 48 ITNQEDVEKV-LDDVKPAIIIHCAAEKSPDRCASDPDGTKALNVAASQL--LAEQTAARN 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+L+++STD V++G + Y+ + E +P N YG++K E + + +LR +++
Sbjct: 105 IVLVYISTDYVFDGTPGGAPYETDAETSPPNFYGETKRDGEIAVIKASDRAVVLRVPLLF 164
Query: 179 GPQTISPVPKSLPIQWIDSVLSKG--EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
G S +S ID++ +K EKV+ H R P DV +++ + ++ SED
Sbjct: 165 GSGDNS---ESAVNVLIDTIWNKSGKEKVDMDHWAIRYPTNTEDVARVLKDIAEKYTSED 221
Query: 237 -KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG--VQSPADISMDI 293
++ +L DR ++ ++ E +A+ G I V+ S+VD V+ P D +
Sbjct: 222 PTKLPRILQFSSEDRCTKYEICERLAQALGLPMPHI--VANSTVDPNPSVKRPYDCHLS- 278
Query: 294 TKLVQTLNIDPVT 306
TK ++ L I+ T
Sbjct: 279 TKALKDLGINVTT 291
>gi|291567036|dbj|BAI89308.1| putative methionine adenosyltransferase [Arthrospira platensis
NIES-39]
Length = 293
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSRWEVYGTYNSSPVTD-------SGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+ +PD + INV ++ ++S
Sbjct: 52 LGDLKEVWEEI-KPDAVIHAAAASKPNFCQENPDISHKINVVAA--GDMASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N+YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S +Q L G + F DE R PV K +L L+ +K++ +L
Sbjct: 167 SPHGGSF-MQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
++GG R+SR + ++A++ I P V D S+D
Sbjct: 220 HLGGKQRISRYEFGLLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLD 268
>gi|72012984|ref|XP_783113.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Strongylocentrotus purpuratus]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 23/294 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+VLV G +G +G+ L++ E E P DV S L VD++
Sbjct: 2 KVLVTGASGLMGRALMR---EFERTPSCDVLGLAFSRAKGSLR-----------KVDIRD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F QPD +V+ A P V E D ++A +N S ++ + L
Sbjct: 48 EGEVRKVMQEF-QPDAIVHAAVQRRPDVVEKDEEAAKKVNC--SATETIAKISAEMGTFL 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G K YK D P+N YG+ K+ EK N AILR ++YG I
Sbjct: 105 IYISTDYVFDGTKPPYKPTDATNPLNKYGQQKLEGEKISQAHAPNCAILRVPVLYG--QI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
V +S +++++++ EK + D C RCP V D+ + + RW ++ K M +
Sbjct: 163 ETVEESAVTVLLNTLVNR-EKTDMIDDCCTRCPTSVDDIAVVCRQMCERWKTDPKTMSGV 221
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ G + +++ M +A +KP G P D S+D +KL
Sbjct: 222 FHWCGSEFMTKYTMITKIANAFDLPHDHLKPNPVQPTG-GTLRPKDCSLDRSKL 274
>gi|409993284|ref|ZP_11276431.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
gi|409935863|gb|EKN77380.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
Length = 293
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSRWEVYGTYNSSPVTD-------SGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+ +PD + INV ++ ++S
Sbjct: 52 LGDLKEVWEEI-KPDAVIHAAAASKPNFCQENPDISHKINVVAA--GDMASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N+YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S +Q L G + F DE R PV K +L L+ +K++ +L
Sbjct: 167 SPHGGSF-MQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
++GG R+SR + ++A++ I P V D S+D
Sbjct: 220 HLGGKQRISRYEFGLLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLD 268
>gi|448569892|ref|ZP_21638975.1| RmlD substrate binding domain superfamily protein [Haloferax
lucentense DSM 14919]
gi|445723696|gb|ELZ75333.1| RmlD substrate binding domain superfamily protein [Haloferax
lucentense DSM 14919]
Length = 300
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFDVD 60
V G G LG ++Q L G+ +V +HS PL Q+ + D
Sbjct: 4 FVTGANGLLGSVVVQAL---RGQGREVVGGYHSAAPAFDCPLHQVDITDTERVVELLDE- 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+D DVV+NCAA + CE++P+ A ++N + L++ ++ E
Sbjct: 60 ------YDV--------DVVINCAAYTDVDGCESNPEVATAVN--GTAPGDLAAVCDDHE 103
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H STD V++G +FY+E DE AP+ YG+SK+A E + E ++ ILR S +YG
Sbjct: 104 IPFVHYSTDYVFDGETDTFYEEADEPAPIQEYGRSKLAGEHAVREVNADALILRLSFVYG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + P QW+ S L+ G+ V F D+ P +V L L N +S
Sbjct: 164 ARGDTGDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVAATTLELLNAGVSG---- 218
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+V V+ E + E+ G +LI+ + +DR P D++ +
Sbjct: 219 --TYHVASQSAVTPYDFGEEICEVIGGDATLIESSVMADLDRPAARPRRSCFDVSNV 273
>gi|209522781|ref|ZP_03271339.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|423063314|ref|ZP_17052104.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|209496830|gb|EDZ97127.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|406715436|gb|EKD10592.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 293
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 23/288 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 4 KLLVTGASGFLGWNICQ----VAKSEWEVYGTYNSSPVTD-------SGVKFIKTDLTVL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V + +PD V++ AA S P CE +PD + INV ++ ++S +
Sbjct: 53 GDLKQVWEEI-KPDAVIHAAAASKPNFCEENPDISHKINVVAA--GDMASLCGAAGIPYV 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G+ Y+E D + P+N YG KV AE I + AI R ++YG S
Sbjct: 110 FTSTDLVFDGLNPPYRETDLVCPINTYGGQKVKAEGEILARYPKAAICRMPLMYG--IAS 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P S IQ L G + F DE R PV + +L L+ +K++ +L+
Sbjct: 168 PHGGSF-IQGFIKTLKSGNCLNLFEDEFRTPVSGTTAARGLL------LAIEKKVNGILH 220
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+GG R+SR + ++A++ I P V D S+D
Sbjct: 221 LGGKQRISRYEFGLLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLD 268
>gi|170290460|ref|YP_001737276.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174540|gb|ACB07593.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 302
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 26/309 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GGTG LG HL+ L+ + Y V ATHH P + +V+ D+
Sbjct: 3 ILVTGGTGLLGWHLVNKLA----RDYRVIATHHINRPPS---EDQRVEWVYLDL-----L 50
Query: 66 GFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
++ + G +P++V++ AA + CE D A +N ++ L+
Sbjct: 51 DYEGIKRIIGDLRPEIVIHTAAYTDVDGCEIDRKRAFDVNYLAT--KSLARACRGVCEYF 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G + Y EED P+N YG +K+ E + ++R+S IYG
Sbjct: 109 IYISTDYVFDGERGHYSEEDLPYPINYYGLTKLLGEVATTDLLDKSLVIRTSGIYG---C 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP K + LS+G++V F D+ P Y + IL L + ++ L
Sbjct: 166 SPGGKRGFALSLLEKLSRGDEVMAFTDQYLSPTYAPHLASNILKLL------ELRVNGFL 219
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ G DR SR + A VA G L+KP S + + P D S+D K + L +
Sbjct: 220 HIAG-DRASRYEFAIAVARELGADERLVKPSSMDTSSLRARRPRDSSLDTKKAKEELGLP 278
Query: 304 PVTYKDGVK 312
+ +D +K
Sbjct: 279 FKSMRDCIK 287
>gi|385809297|ref|YP_005845693.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
gi|383801345|gb|AFH48425.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
Length = 294
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 29/296 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ GG+G+LGQ+L LSE + + T ++ + F +DL++
Sbjct: 2 KVLITGGSGFLGQYLNIFLSE----RHQIVTTFYNNS-------GNTNEFNSIHLDLRNF 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDS---AMSINVPSSLVNWLSSFTENKEN 121
S + F PDVVV+ AA+S + EN +++NV L + +
Sbjct: 51 SVLRNIFSNF-IPDVVVHTAAVSDTILNENISTKDVYGINVNVTEELAKLCNEYDAK--- 106
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI+ STD VY G + SF KE+ ++ PV++Y ++K+ E I + N+ ILR+++++G
Sbjct: 107 -LIYTSTDLVYAGYRGSFLKEDAKLIPVSLYAETKLMGEVKIKQTFDNYIILRTALLFG- 164
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q+I L + V+ F D+ R PV V + ++I + ++ +S
Sbjct: 165 --FGLNHAKCHFQYIYEQLRNNKPVKVFTDQFRSPVSVIEAARLISEMIDKNISCQ---- 218
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
++N GGP+RVSR ++ E + +I G +L+ + + + D+S++I KL
Sbjct: 219 -IINFGGPERVSRYELTERLCDIAGLDKNLLIKIKLDDMPE-LPKVEDVSLNIDKL 272
>gi|150400814|ref|YP_001324580.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3]
gi|150013517|gb|ABR55968.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3]
Length = 305
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA + +CE + + A N S V ++ + + L H+STD V++G
Sbjct: 65 NPDFVVNTAAFTNVDLCETEKEQAYKTNALS--VGYVGAPCKKLNIPLCHISTDYVFDGE 122
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
Y E DEI P+N YG +K EK + E + +I+R S+ P ISPV + W
Sbjct: 123 DGNYVENDEINPINYYGYTKAEGEKILNELNHDLTSIVRISV---PYCISPVKVNF-FMW 178
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ +L KGE + D+ P ++ ++V I+ + K L + GG ++VSR
Sbjct: 179 VLDMLKKGEDMNILIDQWNTPTFINELVDGIVII------HKKDASGLFHFGGGEKVSRY 232
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ A VAEI + I PV +S ++ P D +++ K+ + L I
Sbjct: 233 EFALKVAEIFEMDKTPINPVESSEMNWKANRPKDTTLNNGKIERKLKI 280
>gi|387198512|gb|AFJ68854.1| rossmann-fold nad -binding domain-containing protein, partial
[Nannochloropsis gaditana CCMP526]
Length = 278
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 64/276 (23%)
Query: 81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--- 137
++ AA+S P C +P+ AM +N P +L++ + + E LL+ STDQV+ G S
Sbjct: 1 MHLAAMSSPAACARNPEKAMRVNCPLALLD--ALALHSPEALLVFFSTDQVFSGTVSPPA 58
Query: 138 FYKEEDEIA------PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP---K 188
Y E E PVNVYG+SK A E+ I ++ ILRSS I GP P P +
Sbjct: 59 LYSEAGESGRREEEEPVNVYGRSKRAFERAIQDRWPRHLILRSSNIIGP----PSPFLRQ 114
Query: 189 SLPIQWIDSVLSKG-EKVEFFHDECRCPVYVRDVVKIILALTNRWLS------------- 234
+QW+D +L +E F DECR +Y++DV+ ++ AL + + S
Sbjct: 115 GKFLQWLDELLETSVGPLELFDDECRSFLYLQDVLSLLCALLDSYRSSRPLEGPTAGGNV 174
Query: 235 ------------EDKQ-------------MQLLL---NVGGPDRVSRVQMAEVVAEIRGY 266
ED + LL+ N+GGPD ++RV + +V RG
Sbjct: 175 GRGEPILGAREGEDAKDASSLQRASLPASAPLLVGTYNMGGPDALTRVDLGRLVWRARGG 234
Query: 267 S----TSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ I PV +S++ ++P +I MD KL Q
Sbjct: 235 ERGDCSGRIVPVRRASLNLNFEAPLNIGMDSGKLRQ 270
>gi|432330706|ref|YP_007248849.1| dTDP-4-dehydrorhamnose reductase [Methanoregula formicicum SMSP]
gi|432137415|gb|AGB02342.1| dTDP-4-dehydrorhamnose reductase [Methanoregula formicicum SMSP]
Length = 313
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 23/310 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G G+LG +L + + +P V T +TPL L+ D +P FF +L
Sbjct: 4 KILITGANGFLGANLTR---QFFNRPETSVILTSRNTPL-WLVKDTMP----FFPGNLLD 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K PD+V+N +L +CE +PD A I V S+ + L+ + + +
Sbjct: 56 ERFVEKLLVK-ENPDIVINTVSLVNVDLCEENPDLARQITVDSARI--LAKAAKKTGSRM 112
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII-YGPQT 182
+H+STDQV++G KSFY EED P+N YGK+K+ AE I + I+R++ + P
Sbjct: 113 VHISTDQVFDGEKSFYTEEDMPNPINQYGKTKLEAEHQILRYLQDAMIIRTNFFGWSPCG 172
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+P +W+ L + + ++ F + P+ V + I +L +S D +
Sbjct: 173 HAPTFG----EWVYQCLYERKVMQLFTNFYFSPIEVTSLAGTIDSL----ISTD--FAGI 222
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
L+V G +R S+ +A+ G+ S I S + P D+S+ + + L+
Sbjct: 223 LHVCGSERCSKFDFGVQLAKETGFDPSSIVAYEMDSSTLRAKRPKDMSLSVKRCESLLHT 282
Query: 303 DPVTYKDGVK 312
T ++ ++
Sbjct: 283 RLPTLQESIE 292
>gi|373457577|ref|ZP_09549344.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
gi|371719241|gb|EHO41012.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
Length = 301
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 24/310 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKS 63
++VVG G LGQ+L++ + K AA+ P P H + + +D+ +
Sbjct: 4 LIVVGANGLLGQNLIKRFRK---KHQIFAASVEEQPF-------FPADHVYSYTQLDITN 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
L+ +PD+V+N AA + CE P+ S+NV V +L + + +
Sbjct: 54 RVAVIDF-LQTIKPDIVINTAAFTNVDACEEQPEHCWSVNVRG--VEYLVDASRSFNPIF 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IH+STD V++G Y EEDE P Y +SK+AAE + + I R+ +++G +
Sbjct: 111 IHVSTDYVFDGENGPYSEEDEPNPRGNYARSKLAAEHVVENSNLEYIIARTQVLFG---V 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ + + W+ L+ +K+ D+ P Y D + I L R + L
Sbjct: 168 ANGVRHNFVTWVIEQLTNNKKIRIVDDQIGTPTYAPDFCEAIDRLLER------EAFGLF 221
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+V G + +SR A +A++ SLI+ +++ + + P + + + KL+ +
Sbjct: 222 HVSGAEIISRYDFAVKIAQVFELDASLIERITSKELKQKAPRPMNSAFKVYKLINYSGWE 281
Query: 304 PVTYKDGVKL 313
P + + +KL
Sbjct: 282 PHSLDEALKL 291
>gi|416375764|ref|ZP_11683395.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
gi|357266478|gb|EHJ15099.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
Length = 249
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 39/277 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG +L Q E + V ++++ L D+ +FV DV
Sbjct: 2 KKLLVTGASGFLGYNLCQYAQE----NWQVYGSYYNHKL-----DSKNINFVKVDV---- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ D + F Q PD V++ AA S P C+N+P+ + INV +S ++ +
Sbjct: 49 -TNIDELQTIFKQIKPDAVIHLAAASKPNYCQNNPEDSYKINVTAS--GNIAKLCADVNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK---FIYEKCSNFAILRSSIIY 178
+ STD V++G+ YKE D ++P++ YG+ KV AE+ IY K I R +++
Sbjct: 106 PCVFTSTDLVFDGLNLPYKESDPVSPISYYGEQKVKAEQEMLIIYPKT---VICRMPLMF 162
Query: 179 GPQTISPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G +P +ID L +G+K+ F DE R PV K +L L+
Sbjct: 163 G------IPSPYAASFIDFFLKTFREGKKLSLFTDEYRTPVSGLTAAKGLL------LAL 210
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK 272
+K ++++GG RVSR + ++AE+ +S LI+
Sbjct: 211 EKGEGEIIHLGGRKRVSRYEFGNLMAEVFNFSQDLIR 247
>gi|302039637|ref|YP_003799959.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira
defluvii]
gi|300607701|emb|CBK44034.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira
defluvii]
Length = 290
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 25/225 (11%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-----LIHLSTDQV 131
P +V++CAALS CE DP A INV + TE L I LSTDQV
Sbjct: 56 PALVIHCAALSRTGACEQDPARARRINVEA---------TERLAGLARDIPFIFLSTDQV 106
Query: 132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
++G K +Y E D + P+NVYG++K AE+ + E ++ +I+R ++ G SP
Sbjct: 107 FDGTKGWYVESDAVHPLNVYGQTKADAEQVVLENPAH-SIVRIALTAG---TSPTHDRSF 162
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
++ + +KG K+ F DE RCP+ +V+ + W L ++GG +R+
Sbjct: 163 VEDMLRAAAKGTKLTLFTDEYRCPIPAGPLVRAL------WEFAAHPRSGLYHLGGSERL 216
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
SR ++ E++A I+P S + G P D+SM K+
Sbjct: 217 SRWEIGELLARRYPELRPCIQPGSVADY-HGPLRPPDLSMRSDKM 260
>gi|282165389|ref|YP_003357774.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE]
gi|282157703|dbj|BAI62791.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE]
Length = 281
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 31/293 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+++V G+G LG +++ L K ++V T S P V D+ +
Sbjct: 1 MILVTGSGLLGSDVIRVLR----KEHEVTGTFSSHP---------KEGAVRLDI---TDR 44
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G A+ +P+ VV+ AAL+ CE+ PD A SIN + + LI+
Sbjct: 45 GNTIRAVGELKPEYVVHTAALTNVDYCEDHPDEAASINDMGT--KNVVDAARMAGARLIY 102
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G K Y+EED + P++VY SK+ E + E AI R+S++YG
Sbjct: 103 VSTDFVFDGSKGMYREEDPVNPISVYAYSKLMGEYRVKE-LPGSAIARTSVVYGN----- 156
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ + W+ L+K + ++ D+ P D I AL + +
Sbjct: 157 -ARQNFVTWVRDSLAKKQTIKVVTDQFNSPTLSYDCALAIAALIRHG------AEGTYHT 209
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
G +R+SR A +A G LI+PV++ ++ + + PAD S+D++K+ Q
Sbjct: 210 AGGERISRYDFAVKIARFYGLDPGLIEPVTSDTLKQKAKRPADSSLDVSKIGQ 262
>gi|330508400|ref|YP_004384828.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP6]
gi|328929208|gb|AEB69010.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP6]
Length = 290
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 32/305 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G G L + ++ G+ H+ P + + DL
Sbjct: 2 RIFITGGSGLAGSKLAE-MALARGEQVYSGYAHNQPPYGKEV-----------KFDLLDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+G + +PDV+V+ AAL+ CE D A INV + ++ + L+
Sbjct: 50 NGIRDTIERM-RPDVIVHSAALTDVDRCERKKDLAYRINVEGTRT--IAEAARKAGSYLV 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+EE+E PV+ YG SK+ E+F ++ I R+ +IYG +
Sbjct: 107 YISTDYVFDGQRGLYREEEETNPVSYYGLSKLLGEQFCLDQG---CIARTCVIYGSR--- 160
Query: 185 PVPKSLPIQ---WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
P S + W+ + L G++V D+ P ++ ++L NR LS
Sbjct: 161 --PASGKVNFALWLLNALKSGKEVRVVTDQFITPTLNSNLAAMVLEAANRNLSG------ 212
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ ++ G RVSR A +A LI P S + + P D S+D +K +TL
Sbjct: 213 IYHLSGAARVSRYDFACELARAFDIDRRLIIPSQMSDIGWLARRPMDSSLDTSKASRTLK 272
Query: 302 IDPVT 306
P+
Sbjct: 273 NRPLN 277
>gi|448310069|ref|ZP_21499921.1| dTDP-4-dehydrorhamnose reductase [Natronorubrum bangense JCM 10635]
gi|445588399|gb|ELY42642.1| dTDP-4-dehydrorhamnose reductase [Natronorubrum bangense JCM 10635]
Length = 297
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 23/315 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G +G L++ + E ++V T+H T P ++ L ++DL+
Sbjct: 3 ILVIGANGLVGSSLVRTCLDRE---HEVIGTYH-TERPDFDIELL-------ELDLRDSD 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
AV + P VVNCAA + CE +P++A ++N V L+ ++ +H
Sbjct: 52 RIRAVVERVA-PTAVVNCAAYTDVDGCEQNPETAHAVNAEGPGV--LAEVCAERDVSFVH 108
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G + Y E+D+ P+ VYG++K+ E+ + E S + R S ++G +
Sbjct: 109 FSTDYVFGGEAEEPYTEDDDPNPIQVYGETKLEGEQRVLEAHSGAIVCRLSFVWGRHGAT 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P+ P W+ GE V F D+ P D +++L L + + L +
Sbjct: 169 GDPEGFP-AWVLGRAQSGEVVPLFTDQKVTPTRAGDASEVVLELL------ECDVAGLFH 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
V D V+ + ++ E + ST+ L++ S V+R P + ++V++L D
Sbjct: 222 VASQDCVTPYEFGRLILEEKEPSTTGLLEESSLEDVERAAPRPGYTCLSTDRVVKSLGHD 281
Query: 304 PVTYKDGVKLTLAAE 318
T + V L+ E
Sbjct: 282 RPTVEAAVSTVLSTE 296
>gi|90102185|gb|ABD85290.1| methionine adenosyltransferase II beta variant 2 [Homo sapiens]
Length = 306
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 129/270 (47%), Gaps = 20/270 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
+ G +++++ +MA +A+ +S ++P
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRP 267
>gi|430747485|ref|YP_007206614.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
gi|430019205|gb|AGA30919.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
Length = 294
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 27/294 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV++ G +G LG LL L E + + + T T P VDL +
Sbjct: 2 RVVLTGASGQLGSTLLFRLVESGHEVWAWSGTEEGTRGP----------ISLRTVDL-TD 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENL 122
G A L P+VV++ ALS V DP ++N ++ L NW ++
Sbjct: 51 EGAVAHGLAEADPEVVIHAGALSSAEVVRRDPVRGRAVNTEATARLANWCATHGRR---- 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L++ STD V++G K++ +EED+ P+ YG++K AE + + R S++YGP
Sbjct: 107 LVYTSTDMVFDGSKAWSREEDQAEPILAYGRTKHDAEPAVLAVPRGL-VARMSLMYGP-- 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S + + + L G FF DE R P+ + I++ L + +++ L
Sbjct: 164 -SRSGRESFYERTIAGLRGGVSQTFFEDEFRTPLDLESAALILVRLA------ESEVRGL 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
L+V GP+RVSR + A G +L+ + + P D+S+D +KL
Sbjct: 217 LHVAGPERVSRYDLVRRQAMALGVDPALVLANRQADLTFAEPRPVDVSLDTSKL 270
>gi|431797117|ref|YP_007224021.1| dTDP-4-dehydrorhamnose reductase [Echinicola vietnamensis DSM
17526]
gi|430787882|gb|AGA78011.1| dTDP-4-dehydrorhamnose reductase [Echinicola vietnamensis DSM
17526]
Length = 310
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 19/313 (6%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVD 60
+K +LV G G LGQ L+ L +E + V AT + LPQ F + +D
Sbjct: 7 NKPTLLVTGANGLLGQKLVNRL--LEKDSFHVIATGRGACRLPQTW-----EGFTYASMD 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ V ++ P+VV++ AA++ CE ++ NV + V + E
Sbjct: 60 ITDKENVLEVFQRYS-PEVVIHGAAMTNVDECETAQEACYQQNVAA--VGNIIVAAEQYH 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ L+H+STD +++G Y E+ PVN YG++K+ AE I + N+ I R+ ++YG
Sbjct: 117 SFLVHVSTDFIFDGEAGPYTEDAVPNPVNYYGETKLQAEALIQQSSLNWGIARTVLVYGI 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ +S + W+ L +G+ ++ D+ R P D+ + + L +++ +
Sbjct: 177 S--HDMSRSNIVLWVKKSLEEGKDLQLVDDQLRTPTLAEDLAEGCI------LMAEQRAK 228
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ N+ G + ++ MA AE + I +S+ + + P + K L
Sbjct: 229 GVFNISGDELLTPYDMAIQTAEFFKLDKTKINKTDSSAFRQTAKRPMKTGFVVQKAKDQL 288
Query: 301 NIDPVTYKDGVKL 313
N P ++ +G+++
Sbjct: 289 NFKPKSFTEGIEI 301
>gi|124007540|ref|ZP_01692245.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134]
gi|123987023|gb|EAY26779.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134]
Length = 311
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 15/243 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-----KENLLIHLSTDQ 130
+PD V++ AA++ CE D +NV S V +L + K L+HLSTD
Sbjct: 70 KPDAVIHTAAMTQVDDCETQRDLCWQLNVNS--VEYLIEACQQLKQAGKAPFLVHLSTDF 127
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+++G Y EE PV+ YG+SK+AAE+ + ++I R+ ++YG + +S
Sbjct: 128 IFDGAAGPYHEEATANPVSYYGESKLAAEQALLASNIQWSIARTVLVYG--ITEAMSRSN 185
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
I W+ L +G+ + +D+ R P D+ +L DK++ + N+ G D
Sbjct: 186 IILWVKKSLEEGKTIHVVNDQWRTPTLAEDLA------MGCFLMADKKISGIFNISGKDF 239
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
++ +MA A+ SLI AS + + P + K +Q LN P ++ +G
Sbjct: 240 LTPYEMAIKTAKYFNLDASLIVKTDASRFSQPAKRPPKTGFILDKAIQQLNYAPRSFDEG 299
Query: 311 VKL 313
+ +
Sbjct: 300 IAI 302
>gi|170724953|ref|YP_001758979.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908]
gi|169810300|gb|ACA84884.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908]
Length = 327
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 157/314 (50%), Gaps = 24/314 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV++ G TG LG+ +++ L + + + + AT S + +DL
Sbjct: 24 RVMITGSTGLLGRAVVKQLKQTD--EHLLIATGFSRA-----------ETGIYKLDLTDE 70
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ QPDV+++CAA P + E P++A+++N+ ++ L+ + + LI
Sbjct: 71 EAISEF-IGVHQPDVIIHCAAERRPDISEQSPEAALALNLGAT--GALAKAAKQQGTWLI 127
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E D+ PVN YG+SK+ E+ + S+FA+LR I+YG +
Sbjct: 128 YISTDYVFDGTEPSYSEADKPNPVNFYGESKLQGEQALLATASDFAVLRLPILYGE--VE 185
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ +L S + V+ + R P +D+ I + L + + + +
Sbjct: 186 KIEESAVLVLLNQLLDSTPQNVDNW--AVRSPTSTQDIALAIEQMIGLHL-KGEDLNGIY 242
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ +S+ QM V+AE+ ++ + P+S S +D + P D ++ +L +
Sbjct: 243 HFSAKQTMSKYQMLLVLAELFELNSEHLTPIS-SPMDTA-KRPHDCTLSCQRLTELGIAS 300
Query: 304 PVTYKDGVKLTLAA 317
+ +K+GVK +L +
Sbjct: 301 QIAFKEGVKESLVS 314
>gi|337286096|ref|YP_004625569.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfatator indicus DSM
15286]
gi|335358924|gb|AEH44605.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfatator indicus DSM
15286]
Length = 279
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV+NCAA ++ E P AM +N + N L + L+H STD V++G
Sbjct: 52 RPDVVINCAAYNLVDRAEEFPWEAMRVNF-GGVCN-LVYACRTYNSFLVHYSTDYVFDGE 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y EED+ P+N YGKSK+ E FI + N+ I R+S +YG + + K + QW
Sbjct: 110 KEGLYTEEDDTNPLNNYGKSKLYGENFIRDNLENYLIFRTSWVYGEGKQNFLYKLM--QW 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ K E + DE P R +V++ L + L K + L+N G SR
Sbjct: 168 AE----KQEYLRIACDEFSVPTSTRTIVEVTLKALDTGL---KGLYHLVNSG---YASRY 217
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
+ A+ +I+G I P S + D + P +M +++ + LNI+ +++
Sbjct: 218 EWAKAFFKIKGIK-KFIYPASQADFDLPAKRPRFSAMSNSRICKKLNIEIADWRE 271
>gi|292656186|ref|YP_003536083.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
gi|291370755|gb|ADE02982.1| RmlD substrate binding domain superfamily [Haloferax volcanii DS2]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VK 136
D+V+NCAA + CE++P+ A ++N + L++ +++E IH STD V++G
Sbjct: 63 DLVINCAAYTDVDGCESNPEVATAVN--GTAPGDLAAVCDDREIPFIHYSTDYVFDGETD 120
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
FY+E DE AP+ YG+SK+ E + + + ILR S +YG + + P QW+
Sbjct: 121 GFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLSFVYGARGDTSDLVGFP-QWVA 179
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
S L+ G+ V F D+ P +V L L + +S +V V+
Sbjct: 180 STLAAGDTVPLFTDQTMTPSRAGNVATTTLELLDAGVSG------TFHVASQSAVTPSDF 233
Query: 257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLA 316
E + E+ G +LI+ + +DR P +D++ + L T +D + A
Sbjct: 234 GEKICEVIGGDATLIESSVMADLDRPAARPRRSCLDVSNVEGELGCSQPTLEDDLAALEA 293
Query: 317 A 317
A
Sbjct: 294 A 294
>gi|255523732|ref|ZP_05390698.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|296186736|ref|ZP_06855138.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium
carboxidivorans P7]
gi|255512601|gb|EET88875.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|296048773|gb|EFG88205.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium
carboxidivorans P7]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LG+ L S+ ++V + S + L D H FV D+
Sbjct: 5 KKILITGSNGMLGKDLTSLFSK--NDNFEVFGINRSNDIN--LKD--DHYFV---CDITD 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + LK+ P+++++CAA CE D + A +N S+ + LSS+ K
Sbjct: 56 FEELNNI-LKYINPEIIIHCAANVNVDGCEKDKNYAYKLNSESTKI--LSSYKSEKTKF- 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD ++ G YKE+D+ P+N Y SK E F + N I+R++ IYG
Sbjct: 112 IYISTDSIFNGETGNYKEDDKANPLNYYAFSKFEGENFALLQNKNAIIIRTN-IYGFH-- 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P SL ++W L K+ F+D P+Y + KI++ L + ++
Sbjct: 169 KPYGSSL-VEWALKNLKSENKISGFNDVYFNPIYTGQLGKIVMKLI------QIDYKGII 221
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G + +++ + +A+ G + LI S S++ + P + +++ITKL ++
Sbjct: 222 HTGCENFINKYEFLIRIAQKFGLNNELIDESSVDSINFSARRPKNTTLNITKLKGLIDF- 280
Query: 304 PVTYKDGV 311
+T +DG+
Sbjct: 281 TITLEDGL 288
>gi|448343110|ref|ZP_21532052.1| dTDP-4-dehydrorhamnose reductase [Natrinema gari JCM 14663]
gi|445624170|gb|ELY77559.1| dTDP-4-dehydrorhamnose reductase [Natrinema gari JCM 14663]
Length = 296
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 34/320 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
++LVVG G LG ++++ + + +DV T+HST PL Q
Sbjct: 2 QLLVVGANGLLGSNVVRASQQ---RGWDVYGTYHSTQPTFHIPLKQF------------- 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL+ F + L PDVV+NCAA++ CE +P+ A +N L++ +
Sbjct: 46 -DLREYDSFGDI-LTEHDPDVVINCAAMTDVDSCETNPEQAYVLN--GDAPGGLAAHCDA 101
Query: 119 KENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+H+STD V++G + Y E + V VYG+SK+A E+ + E+ ++ + R S +
Sbjct: 102 NGVEFVHISTDYVFDGTEREPYSESADTNAVQVYGESKLAGEQAVIEETTDALVARLSFV 161
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+G S P W+ L + + F D+ P KI+L L ++
Sbjct: 162 WGIHCSSNDLTGFPA-WVRDQLQSDQDIPLFTDQWVTPTRAGQAAKILLDLV------EQ 214
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
L ++ V+ + EV+A+ S L+ S V+R P +D+ K+
Sbjct: 215 DATGLFHITCSSCVTPYEFGEVIADRIDSSEELLSEGSIDDVERDATRPTHSCLDVEKVE 274
Query: 298 QTLNIDPVTYKDGVKLTLAA 317
L T ++ V+ A
Sbjct: 275 SELGRPQPTLREDVETVWGA 294
>gi|163846690|ref|YP_001634734.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl]
gi|222524495|ref|YP_002568966.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl]
gi|163667979|gb|ABY34345.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl]
gi|222448374|gb|ACM52640.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl]
Length = 285
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 35/300 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +R L+ GGTGYLGQ L++ + +AAT HS P L + +D
Sbjct: 1 MNGERYLITGGTGYLGQALIRHARCLG---VQIAATFHSQTPPALA------EVAWHPLD 51
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+ + A+ ++ QP V+V+ A + DPD + V ++
Sbjct: 52 LRDAAAVMAL-IREVQPTVIVHTA------FRQYDPDL---MAVTGEGAGHVAVAAAQIG 101
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIH+S+D +++G K Y E+D P+ YG++K AE + AI+R+S+IYG
Sbjct: 102 ARLIHMSSDVIFDGEKGEPYTEDDPPNPITDYGRAKARAEALVQAAYPAAAIVRTSLIYG 161
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
P+ + +++GE+ E F DE RCP++V D+ ++ L R
Sbjct: 162 ---FEPMDRHTAFAL---AVARGERPERLFRDEFRCPIFVDDLAVALIDLAQR------D 209
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ ++N+ G + +SR + ++A+ G LI+ A S + P + ++DI++ Q
Sbjct: 210 YRGVINLAGAEILSRYEWGCLLAQAYGLDPGLIR--GAWSAESPTPRPRNCALDISRARQ 267
>gi|456873229|gb|EMF88638.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira santarosai
str. ST188]
Length = 282
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 22/241 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+ +++CA L+ CE + A I++ S V ++ + ++H+STD +++G
Sbjct: 52 RPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQINSKMVHISTDHLWDGT 109
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-----QTISPVPKSL 190
E+ + PVN+YGK+K +E+ + S ILR++ +GP Q++S
Sbjct: 110 MQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FFGPGLQWRQSLS------ 162
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
WI + L++ EK+ F+D P+ + + ++IL+L K+ + + + G +R
Sbjct: 163 --DWIINSLNRNEKINAFYDVFFTPISIYHLARVILSLIQ------KKTKGIYHTVGSER 214
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
+S+ A +A+ ST LI+P+S + P D+S+ K+V LN T + G
Sbjct: 215 ISKYDFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLSTDKVVGFLNTSMPTIQAG 274
Query: 311 V 311
+
Sbjct: 275 I 275
>gi|395817686|ref|XP_003782290.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Otolemur
garnettii]
Length = 298
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 20/262 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLVTGATGLLGRAVFK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIVHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMAEVVAE 262
+ G +++++ +MA +A+
Sbjct: 235 GTFHWSGNEQMTKYEMACAIAD 256
>gi|28896998|ref|NP_796603.1| dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD
2210633]
gi|153839167|ref|ZP_01991834.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ3810]
gi|260362308|ref|ZP_05775275.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
K5030]
gi|260897623|ref|ZP_05906119.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
Peru-466]
gi|260899554|ref|ZP_05907949.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ4037]
gi|28805206|dbj|BAC58487.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
RIMD 2210633]
gi|149747339|gb|EDM58317.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ3810]
gi|308087496|gb|EFO37191.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
Peru-466]
gi|308108746|gb|EFO46286.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ4037]
gi|308111340|gb|EFO48880.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
K5030]
Length = 290
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 28/316 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VL++G +G++G + L + K Y +A P ++ +D + F+V +
Sbjct: 2 KNVLLLGESGFVGSVVYNSLHCV-CKVYTIA------PNKKITIDNV------FEV---A 45
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F ++ + DVV+NC A++ CEN+ +N ++ V + + ++K+ L
Sbjct: 46 NDVFKSIEI--NNIDVVINCIAMANLDQCENNKLDCELVN--TTFVTHIVDYLKDKDIKL 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+S++ VY+G+ + Y E P+N YG K A+ +I +N+AI R +YGP+ I
Sbjct: 102 VHISSNAVYDGLNAPYSENSLREPINYYGICKSNADYYIESNLNNYAIARPITVYGPRKI 161
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ P+ +I + GE + D ++V D+ I L+ LS+ ++ +
Sbjct: 162 E--QRDNPVSFIVKKILSGESFDLVDDNIVNMIHVEDLSNAIKKLS---LSD---LKGVY 213
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N+ G R + +A+I G + I VS S+ + P + S D K+ LNI+
Sbjct: 214 NLSGDVSECRYDLGIRIAKIMGSDLNKINKVSGSNFKMAAKRPYNTSFDNKKMKSVLNIE 273
Query: 304 PVTYKDGVKLTLAAEA 319
P + L A+A
Sbjct: 274 PKNIDIAISEILNAKA 289
>gi|340517615|gb|EGR47859.1| predicted protein [Trichoderma reesei QM6a]
Length = 327
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 161/324 (49%), Gaps = 37/324 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VLV G TG LG+ + G ++V + +S +D
Sbjct: 1 MAQRTVLVTGATGLLGREVAAAFRNSSG--WNVKGSGYSRA----------DGVDIIKLD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG+ A + +PDVVV+CAA P + DP++A ++N+ +S L+S T ++
Sbjct: 49 LESGADI-AKTIDEIRPDVVVHCAAQRFPDKVDKDPEAARTLNIAASKS--LASVTAARD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
L+I++STD V+ G ++ Y+ + P N+YG++K+ EK + E+ + +L
Sbjct: 106 ILMIYISTDYVFPGRPGEAPYEADATPEPTNLYGQTKLDGEKAVREEYAIAGKEGLGVVL 165
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI------I 225
R ++YG +T S ++ + + ++G K++ H R P DV ++ +
Sbjct: 166 RVPVLYGHAETPSESAVNVLMDSVWKAQTQGTKIKMDHWAIRYPTNTEDVGRVCHGKSRL 225
Query: 226 LALTN---RWL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSV 279
+ L N ++L S+ K + +L DRV++ ++ + +I G S + I+P +
Sbjct: 226 MLLYNVAVKYLDSSDRKHLPQILQFSSEDRVTKYEICQRFGDIMGLSIANIEPNTEGNDP 285
Query: 280 DRGVQSPADISMDITKLVQTLNID 303
+ VQ P D + T+ ++ LNID
Sbjct: 286 NASVQRPYDCHLS-TRELKNLNID 308
>gi|83523771|ref|NP_001016828.2| methionine adenosyltransferase 2 subunit beta [Xenopus (Silurana)
tropicalis]
gi|82178023|sp|Q566L8.1|MAT2B_XENTR RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|62203140|gb|AAH93462.1| methionine adenosyltransferase II, beta [Xenopus (Silurana)
tropicalis]
Length = 334
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 21/312 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FEYLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 AAAVKALIQDF-KPHVIIHCAAERRPDIVESQPEFASLLNVVAS--ENLAKEAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L LT R L +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRL-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +M +A+ +S ++P++ V P + +D +KL +
Sbjct: 249 HWSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKLEKIGIGQ 307
Query: 304 PVTYKDGVKLTL 315
++ G++ +L
Sbjct: 308 RTPFRVGIRESL 319
>gi|418678040|ref|ZP_13239314.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687551|ref|ZP_13248710.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742348|ref|ZP_13298721.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400321230|gb|EJO69090.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410737875|gb|EKQ82614.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750706|gb|EKR07686.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 282
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 121/241 (50%), Gaps = 22/241 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+ +++CA L+ CE + A I++ S V ++ + ++H+STD +++G
Sbjct: 52 RPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQINSKMVHISTDHLWDGT 109
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-----QTISPVPKSL 190
E+ + PVN+YGK+K +E+ + S ILR++ +GP Q++S
Sbjct: 110 MQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FFGPGLQWRQSLS------ 162
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
WI + L++ EK+ F+D P+ + + ++IL K+ + + + G +R
Sbjct: 163 --DWIINSLNRNEKINAFYDVFFTPISIYHLARVILLFIQ------KKTKGIYHTVGSER 214
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
+S+ A +A+ ST LI+P+S + P D+S+ K+V LN+ T + G
Sbjct: 215 ISKYDFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLSTDKVVGFLNVSMPTIQAG 274
Query: 311 V 311
+
Sbjct: 275 I 275
>gi|149200332|ref|ZP_01877351.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155]
gi|149136568|gb|EDM25002.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155]
Length = 288
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 30/300 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K++VL+ G G+LG L LSE Y+V T+ ++ A S DL+
Sbjct: 2 KEKVLITGIHGFLGTELANVLSE----DYEVYGTYFNSS-------ATSSSHKTGRCDLR 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S +V L +P V + AALS P C+ + + IN +S LS +
Sbjct: 51 KLSEVKSV-LDRVRPSKVFHLAALSDPNTCDREAKLSEEINFLAS--RLLSELCAERGIK 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G K Y EEDE+ P++ Y + K+ AE+ + + + +I R ++Y +
Sbjct: 108 LLFTSTDLVFDGRKGNYSEEDEVNPLSRYAEHKLMAEE-VMKGNDSASICRMPLMY---S 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S+ + I L E+V F DE R +V K ++ +++ L L
Sbjct: 164 TADNKRSM-VYGIKEKLKNREQVGLFTDEYRSAAHVNCASKALMKVSSLELG-------L 215
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD----ITKLVQ 298
+++GGP R SR +M ++AE IKP V + PAD+S D I+K +Q
Sbjct: 216 VHLGGPLRESRYEMGLLIAEAFSLPKYFIKPCLQKDVKMAAERPADVSFDNSVAISKAIQ 275
>gi|390354165|ref|XP_799081.3| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 31/319 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+VL+ G +G LG+ +L+ + +DV ++ L VDL
Sbjct: 2 KKVLITGASGLLGREVLKTF---QASGWDVLGLAYTRAKDNL-----------KKVDLTD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +K QPDVV++ AA V E DP + +NV ++ V ++S E LL
Sbjct: 48 TEPLQDV-IKEYQPDVVIHAAAERRTDVVERDPQTVQKLNVGATAV--IASVCEKLGILL 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++ST+ V++G K YK D P+N YG+SK E E ILR ++YG +I
Sbjct: 105 VYISTNYVFDGTKPPYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYG--SI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + + KV+ D + R P +VRDV ++L L R ++ + +
Sbjct: 163 ERLNESAATYLLHQIQDDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGER-VSGI 221
Query: 243 LNVGGPDRVSRVQMAEVVAEI----RGYSTSLIKPVSASSVDRGVQSPADISMDITKLV- 297
L+ ++++R QMA ++ ++ + + + P SA G P + SMDI+ +
Sbjct: 222 LHWNTSEQLTRYQMALIITDVFNLPQDHLIANPNPPSA-----GTPRPHNASMDISAVTD 276
Query: 298 QTLNIDPVTYKDGVKLTLA 316
Q + + +++ G++ +LA
Sbjct: 277 QGVKVSDTSFRKGIEESLA 295
>gi|330834784|ref|YP_004409512.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4]
gi|329566923|gb|AEB95028.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4]
Length = 300
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 11/240 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV++ AAL+ CE D A +NV + ++ + +LL+++STD V++GV
Sbjct: 60 KPDVVIHAAALTNVDKCEEDKGLAKLLNV--DVTREIAKSSNQHGSLLVYVSTDYVFDGV 117
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
K Y+EEDE P+N YG +K+ E+ + E S+F I R+S YG S K W+
Sbjct: 118 KGNYREEDEPNPINFYGLTKLQGEREVMENSSSFIIARTSTPYGSNPAS--EKDNFALWL 175
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQLLLNVGGPDRVSRV 254
L EKV D+ P + AL + L E K+ ++++ +VSR
Sbjct: 176 IKKLKNNEKVNVVTDQITSP-----TLNTSFALMLKELIESYKRYNFIIHLTDASQVSRY 230
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID-PVTYKDGVKL 313
+ + +AE+ + LI P + S + + P + S+++ K L ++ P+ + +K+
Sbjct: 231 EFSVKLAEVFESNKELITPTTMSEIKWKAKRPKNSSLNVEKANNVLKVNRPLNLIEALKI 290
>gi|152998986|ref|YP_001364667.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185]
gi|151363604|gb|ABS06604.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185]
Length = 304
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 25/312 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S L+ + LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTAS--QALAMAVKANNAWLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ + + V+ H R P D+ + I + + + E +Q +
Sbjct: 164 KLSESAVLVLVNQLIDRRAQGVD--HWAVRSPTSTADIAQAIDKMIAQHI-EAPIVQGIY 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ + +++ QM + EI ST+ + P S + + + P D ++ T+L
Sbjct: 221 HFSAAETMTKYQMLLTLGEILQLSTAHLTPESTPTDN--AKRPRDCTLSCTRLAALGICS 278
Query: 304 PVTYKDGVKLTL 315
+ + GV L
Sbjct: 279 EINFATGVHQAL 290
>gi|343083516|ref|YP_004772811.1| dTDP-4-dehydrorhamnose reductase [Cyclobacterium marinum DSM 745]
gi|342352050|gb|AEL24580.1| dTDP-4-dehydrorhamnose reductase [Cyclobacterium marinum DSM 745]
Length = 315
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 147/311 (47%), Gaps = 17/311 (5%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K ++L+ G G LGQ +++ + IEGK +A S LP +V+ ++D+
Sbjct: 10 KPKILITGANGLLGQKIIKEIL-IEGKYEAIATGRGSCRLPTEW-----RGYVYEEMDIT 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S A+ K P V++ A+++ CE + + NV ++L N + E ++
Sbjct: 64 KPSEVLAI-FKAYAPQYVIHAASMTDVDRCEVNRHTCFEQNVTATL-NIMKG-CELVKSH 120
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI +STD +++G Y E + P+N YGK+K+ E + + N+ I+R++++YG
Sbjct: 121 LIFISTDFIFDGKNGPYDELAKPNPLNYYGKTKIETEIAVQKYKHNWTIVRTNLVYG--I 178
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + W+ L + +++ D+ R P D+ K L + +K +
Sbjct: 179 AHDMSRSNIVLWVKKGLEQNKELSLVDDQFRTPTLAEDLAKGCLLIV------EKNATGI 232
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N+ G + +S MA + + IK +S + P +DI+K LN
Sbjct: 233 YNISGDELLSPYDMAMLTVKFFELDPKGIKKTDSSVFSQVASRPLRTGLDISKAKNILNF 292
Query: 303 DPVTYKDGVKL 313
P T+++G+++
Sbjct: 293 KPKTFEEGIEI 303
>gi|115530810|emb|CAL49345.1| methionine adenosyltransferase II, beta [Xenopus (Silurana)
tropicalis]
Length = 334
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 149/312 (47%), Gaps = 21/312 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENNWHVLGCGYSRARPR-----------FEYLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 AAAVKALIQDF-KPHVIIHCAAERRPDIVESQPEFASLLNVVAS--ENLAKEAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSIPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L LT R L +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRL-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ +M +A+ +S ++P++ V P + +D +KL +
Sbjct: 249 HWSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKLEKIGIGQ 307
Query: 304 PVTYKDGVKLTL 315
++ G++ +L
Sbjct: 308 RTPFRVGIRESL 319
>gi|320101334|ref|YP_004176926.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162]
gi|319753686|gb|ADV65444.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162]
Length = 298
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 148/304 (48%), Gaps = 25/304 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV GGTG LG + + E + Y+V A+HH + LD + + + D KS
Sbjct: 2 RILVTGGTGLLGLWVTKVFLE---RGYEVYASHHERK--PVGLDGVTWEQMNLE-DFKS- 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A +K +PD +++ AA + CE + A +N ++ + ++ L+
Sbjct: 55 ---VADTVKRVKPDAIIHTAAFTDVDGCEEKKELAYRVNYLATRI--IAETARELNAYLV 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+E D APVN YG +K+ E + I+R S +YG S
Sbjct: 110 YISTDYVFDGERGMYREFDAPAPVNYYGLTKLLGEVAVNTLAPRSLIVRVSGLYG---FS 166
Query: 185 PVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P K + + ++ +++ E+V+ FHD+ P YVR + + I + R ++ ++
Sbjct: 167 PTGKRNFGLVALEKLMNN-EQVDAFHDQYLSPTYVRPLAERIADMVKR------EVVGVI 219
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT-LNI 302
+V G +R SR + A +AE G L+K S + + P D S+D + L+I
Sbjct: 220 HVAG-ERASRYEFASKLAEALGVPRDLVKKTSIKNAGLRARRPRDSSLDTGRAASMGLSI 278
Query: 303 DPVT 306
P+
Sbjct: 279 PPMN 282
>gi|281204543|gb|EFA78738.1| methionine adenosyltransferase regulatory beta subunit
[Polysphondylium pallidum PN500]
Length = 305
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 18/305 (5%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K RVLV G +G LG+ ++ + K ++V S + + F VD+
Sbjct: 4 KIRVLVTGSSGLLGRAFMRTFAGCADK-FNVLGLAFSR------YEKYKNQFPLEHVDIN 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ +F +PDV+++ AA P +CEND D + +NV S+ +++ N
Sbjct: 57 DRVQLTDIVNRF-KPDVIIHSAAERRPDICENDKDRVIQLNVKST--EFINELAMNVGAY 113
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-Q 181
L+ +S+D V++G + YK + + P++ YG++K A+E + N ILR ++YG +
Sbjct: 114 LVLISSDYVFDGENAPYKTDAQTNPLSFYGETKRASEVVCLKNPRNI-ILRVPVLYGQVE 172
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T+S ++ + I K VE + + R P V DV K L L + +
Sbjct: 173 TLSESAVTVVAEQI----KKNANVEIDNWQLRYPTLVDDVAKCTLMLICKKKENGDSISG 228
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ + ++++ +MA V+A++ G S IKP +S G P + +D T Q +
Sbjct: 229 IYHFTDNQKLTKYEMAVVMAKVLGIDASQIKP--GNSKPSGAPRPYNAQLDTTATSQLIG 286
Query: 302 IDPVT 306
+ P T
Sbjct: 287 VLPST 291
>gi|332709592|ref|ZP_08429552.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
gi|332351625|gb|EGJ31205.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
Length = 292
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 31/310 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+K++LV G +G+LG +L Q + + +D+ T+ S + +P DL+
Sbjct: 2 RKKLLVTGASGFLGWNLCQ----LAKEQWDIYGTYFSQTI------DIP-GITLVKADLR 50
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
F + F QP V++ AA S P C+ + + SINV +S+ ++ + + +
Sbjct: 51 E---FQEIKHLFAEIQPAGVIHTAAQSKPNFCQTHREESYSINVTASIN--IARLSADYD 105
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ STD V++G+ Y E D ++P++ YG+ KV AE+ + AI R +++G
Sbjct: 106 IPCVFTSTDLVFDGLNPPYLETDPVSPISYYGEQKVMAEEGMRSHYPKVAICRMPLMFG- 164
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
I P S IQ ++ +G + F DE R PV K ++LAL +++
Sbjct: 165 --IVPPTASSFIQPFLKIIREGRPLSLFTDEIRTPVSGTTAAKGLLLAL--------EKV 214
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
Q L+N+GG +R+SR ++AE+ S + V D S+D + L +
Sbjct: 215 QGLVNLGGKERISRYDFGCLMAEVFELSQDNLGRCLQKDVPMAAPRSPDTSLD-SSLGFS 273
Query: 300 LNIDPVTYKD 309
L P++ ++
Sbjct: 274 LGYQPLSVRE 283
>gi|239788389|dbj|BAH70880.1| ACYPI005374 [Acyrthosiphon pisum]
Length = 300
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDV+V+CAA P E+DP +A +NV S L+ + L+++STD V+ G +
Sbjct: 60 PDVIVHCAAERFPDKVESDPQAAYDLNVGVSA--HLADVANHLNVPLLYISTDYVFNGDE 117
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-QTISPVPKSLPIQWI 195
S YKE DE +P+N YG+ K+ EK + N ILR ++YGP +++ + + +
Sbjct: 118 SPYKETDEPSPINEYGRLKLLGEKAVLAANLNNIILRIPVLYGPVESLEESAITYLLIGL 177
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+ E + + E R P V D+ I+ L + + + + G + ++
Sbjct: 178 KKCQNNNELFKVSNYELRNPSSVDDIAHIVFNLVEKKILSSNDISGIYQWCGKEMYTKYD 237
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTL 315
M +A+I S + PV+ S GV+ P + +D++++ Q ++DG+K L
Sbjct: 238 MVAKMAKIFDMSMEQVVPVNGQS---GVKRPFNTLLDVSRINQLGIGTHTNFEDGIKTVL 294
Query: 316 AA 317
A+
Sbjct: 295 AS 296
>gi|126176068|ref|YP_001052217.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155]
gi|386342822|ref|YP_006039188.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS117]
gi|125999273|gb|ABN63348.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155]
gi|334865223|gb|AEH15694.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS117]
Length = 304
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 151/296 (51%), Gaps = 31/296 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ S+ + V+ H R P D+ + I ++ +++ + ++L
Sbjct: 164 KLSESAVLVLVNQLIESRAQGVD--HWAVRSPTSTADIAQAI----DKMIAQHIEAPIVL 217
Query: 244 NV---GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + +++ QM + EI ST+ + P S + + + P D S+ +L
Sbjct: 218 GIYHFSAAETMTKYQMLLTLGEILQLSTAHLTPESTPTDN--AKRPRDCSLSCARL 271
>gi|448331200|ref|ZP_21520467.1| dTDP-4-dehydrorhamnose reductase [Natrinema versiforme JCM 10478]
gi|445609671|gb|ELY63465.1| dTDP-4-dehydrorhamnose reductase [Natrinema versiforme JCM 10478]
Length = 297
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 22/308 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVG G LG L+ E + DV T+HST P + H D++
Sbjct: 3 VLVVGSGGLLGSALVARCLE---RSIDVVGTYHSTA-PAFDIPLEQH-------DIRETD 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
F + L QPD VVNCAA++ CE+D ++A ++N + ++S ++ +H
Sbjct: 52 AFRTI-LDDHQPDTVVNCAAMTDVDGCESDREAAFAVN--GTAPGEIASCCAVRDVPFVH 108
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G S Y E P+ VYG+SK+A E+ + + + R S +YG + +
Sbjct: 109 VSTDYVFDGNASEPYDETASTDPIQVYGESKLAGEEAVQGVDGDILVARLSFVYGVRGDT 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P W+ + L+ G+ V F D+ P IL L + + L +
Sbjct: 169 NNLIGFPA-WVRNTLADGDDVPLFVDQHLTPTRAGQAADTILEL------HEAGAEGLYH 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
V V+ + +A ++ +LI + V R + P+ +D+T + + L
Sbjct: 222 VACRSCVTPYEFGHEIARLQDADDTLIDESQQADVQRDAERPSYTCLDVTAVEEELGRRQ 281
Query: 305 VTYKDGVK 312
T +D ++
Sbjct: 282 PTLEDDLR 289
>gi|427705639|ref|YP_007048016.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7107]
gi|427358144|gb|AFY40866.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7107]
Length = 291
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 31/313 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG HL Q L++ E + Y +H +P + + V+L
Sbjct: 2 RKLLITGASGFLGWHLCQ-LAKQEWEVYSTYNSHF-IEIPGIKI---------LKVNL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F + P V++ AA S P C+ P + INV S ++ +
Sbjct: 49 -TDFQELKQLFNEINPAAVIHTAAHSQPNFCQIYPQESHLINVTVSCN--IAGLCADYAI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STDQV+ G+ + Y E + P+N+YG+ KV AE + E+ A+ R +++G
Sbjct: 106 PCVFTSTDQVFNGLNAPYNEAVPVCPINIYGEQKVMAEMGMLERYPLTAVCRMPLLFGSA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P +S IQ L + +++ F DE R P K ++LA+ +++
Sbjct: 166 T--PTAQSF-IQPFIQTLKEEKELNLFIDEYRTPASGTTTAKGLLLAV--------EKVN 214
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++++GG +R+SR +++ E+ ++ IK V PAD+S+D ++ L
Sbjct: 215 GIIHLGGKERISRYDFGQLLVEVFKLPSTGIKSCRQKDVKMSAPRPADVSLDSSQAF-GL 273
Query: 301 NIDPVTYKDGVKL 313
P++ K+ +K+
Sbjct: 274 GYQPLSIKEELKI 286
>gi|160873576|ref|YP_001552892.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195]
gi|378706817|ref|YP_005271711.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678]
gi|160859098|gb|ABX47632.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195]
gi|315265806|gb|ADT92659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678]
Length = 304
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 148/293 (50%), Gaps = 25/293 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + +FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSDDFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ S+ + V+ H R P D+ + I + + + E +Q +
Sbjct: 164 KLSESAVLVLVNQLIESRAQGVD--HWAVRSPTSTADIAQAIDKMIAQHI-EAPIVQGIY 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + +++ QM + EI ST+ + P S + + + P D S+ +L
Sbjct: 221 HFSAAETMTKYQMLLTLGEILQLSTAHLTPESTPTDN--AKRPRDCSLSCARL 271
>gi|418025748|ref|ZP_12664725.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS625]
gi|353535009|gb|EHC04574.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS625]
Length = 304
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 148/293 (50%), Gaps = 25/293 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KILVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ + + V+ H R P D+ + I + + + E +Q +
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAIDKMIAQHI-EAPIVQGIY 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + +++ QM + EI ST+ + P S + + + P D S+ +L
Sbjct: 221 HFSAAETMTKYQMLLTLGEILQLSTAHLTPESTPTDN--AKRPRDCSLSCARL 271
>gi|358392298|gb|EHK41702.1| hypothetical protein TRIATDRAFT_31249 [Trichoderma atroviride IMI
206040]
Length = 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 27/315 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VLV G TG LG+ ++ + + V T HS VD
Sbjct: 1 MAERTVLVTGATGLLGREVVSAFKLLHSG-WAVKGTGHSRA----------DGVDILKVD 49
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+S A L +P VVV+CAA P + DP+ A ++N+ +S + L+S T ++
Sbjct: 50 LESAEDV-AKTLDETRPQVVVHCAAQRFPDKVDKDPEGARALNIAASKL--LASVTAARD 106
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
L+I++STD V+ G + Y+ + P N+YG++K+ E + E+ + +L
Sbjct: 107 ILMIYISTDYVFPGRPGDAPYEADATPGPTNLYGQTKLDGENAVLEEYAKAGKEGLGIVL 166
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G K++ H R P D+ +I + +
Sbjct: 167 RVPVLYGHAETPSESAVNVLMDSVWKAQTEGTKIKMDHWALRYPTNTEDIGRICHDVAVK 226
Query: 232 WL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPAD 288
+L + K + +L D++++ ++ + +I G S + I+P + + VQ P D
Sbjct: 227 YLESGDRKNLPRILQFSSEDKMTKYEICQTFGDIMGLSIANIEPNTEGNDPNASVQRPYD 286
Query: 289 ISMDITKLVQTLNID 303
+ T+ ++ L ID
Sbjct: 287 CHLS-TRELKNLGID 300
>gi|448636948|ref|ZP_21675396.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
gi|445765254|gb|EMA16393.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
Length = 292
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 32/303 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG +G LG ++ ++ V A H P D H +D+ S
Sbjct: 2 QILVVGASGLLGGNVTS--VALDRNETVVTAYHSEDPG----FDCPSHQ-----IDITSS 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS-LVNWLSSFTENKENLL 123
+ D + ++ PD +VNCAA++ CE D + A ++N + V W + ++ + L
Sbjct: 51 AAVDDLVIEV-DPDAIVNCAAMTDVDGCETDREQAYAVNADGAEHVAWAA---DSVDAAL 106
Query: 124 IHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ- 181
+H STD V+ G ++ Y E E AP VYG+SK+A E+ + E + I R S +YG
Sbjct: 107 VHTSTDYVFSGEETDRYPETAEPAPKQVYGESKLAGERHVRETHPDPLITRLSFVYGRSL 166
Query: 182 ---TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+IS P W+ KG+++ F D+ P Y + VK +L L L D++
Sbjct: 167 PDGSISGFPA-----WVLEKARKGDEIPLFTDQRVSPSYAKPTVKTLLDL----LEADQK 217
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
N+ V+ + E+V + + + + S + +DR + P +D T +
Sbjct: 218 G--TFNIASRSCVTPYEFGELVVKQAEFEDATLTESSMNDIDRDAERPQYTCLDTTAIEA 275
Query: 299 TLN 301
L+
Sbjct: 276 ALD 278
>gi|148222444|ref|NP_001089523.1| methionine adenosyltransferase 2 subunit beta [Xenopus laevis]
gi|82249356|sp|Q4QQZ4.1|MAT2B_XENLA RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|67678004|gb|AAH97788.1| MGC115498 protein [Xenopus laevis]
Length = 334
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 151/312 (48%), Gaps = 21/312 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FECLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 EAAVKALIQDF-KPHVIIHCAAERRPDIVESQPELASLLNVVAS--ENLAKVAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSIPHPLNLYGKTKLDGERAVLQNNEGAAVLRVPVMYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L LT R + +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANLDHCQQRFPTHVKDVATVCLQLTERKI-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G +++++ ++A +A+ +S ++P++ V P + +D +KL +
Sbjct: 249 HWSGNEQMTKYEIACAMADAFNLPSSHLRPITDEPVG-ATPRPWNPQLDCSKLEKMGIGQ 307
Query: 304 PVTYKDGVKLTL 315
++ G++ TL
Sbjct: 308 RTPFRVGIRETL 319
>gi|448482200|ref|ZP_21605321.1| dTDP-4-dehydrorhamnose reductase [Halorubrum arcis JCM 13916]
gi|445821264|gb|EMA71056.1| dTDP-4-dehydrorhamnose reductase [Halorubrum arcis JCM 13916]
Length = 292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 11/246 (4%)
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ +D+ + + D + + PD ++NCAA++ CE DP+ A ++N + ++
Sbjct: 43 YQIDITASAAVDDLITEV-DPDAIINCAAMTDVDGCETDPERAHAVNADGA--ERVARAA 99
Query: 117 ENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
++ L+H STD V+ G ++ Y E E P VYG+SK+A E+ + + S+ I R S
Sbjct: 100 DSVNAALVHTSTDYVFNGEETALYSETAEPDPKQVYGESKLAGERRVRKTHSDPLIARLS 159
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG P W+ KG+ + F D+ P Y + K +L L L
Sbjct: 160 FVYGRSLPDGAISGFP-AWVLERARKGDNIPLFTDQRVSPSYAKSTAKTLLDL----LEA 214
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
D++ NV V+ + E++ + G++ + + S S VDR + P +D T
Sbjct: 215 DQEGT--FNVPSRSCVTPYEFGELIVDEAGFADATLTESSMSDVDRDAERPQYTCLDTTA 272
Query: 296 LVQTLN 301
+ + L+
Sbjct: 273 IEEALD 278
>gi|351695278|gb|EHA98196.1| Methionine adenosyltransferase 2 subunit beta, partial
[Heterocephalus glaber]
Length = 234
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V+V+CAA + EN PD+A NV +S L+ LI++S+D V++G
Sbjct: 14 PHVIVHCAAERRSDIVENQPDAASQPNVDAS--GNLAKEAAAVGAFLIYISSDYVFDGTN 71
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+EED A +N+YGK+K+ EK + E A+LR ++YG + + +S D
Sbjct: 72 PPYREEDIPATLNLYGKTKLEGEKAVLENNLRAAVLRIPVLYG--EVEKLEESAVTVMFD 129
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
V + H + R P +V+DV + L + + D ++ + G +++++ +M
Sbjct: 130 KVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYEM 188
Query: 257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 189 ACAIADAFNLPSSHLRPITDSPV-IGAQRPRNAQLDCSKL-ETLGI 232
>gi|429859322|gb|ELA34110.1| nad dependent epimerase dehydratase family protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 317
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 33/320 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ K V+V G TG LG+ + + K ++V T +S + F VD
Sbjct: 1 MAGKDVVVTGATGLLGRQVARAFDR---KSWNVKGTGYSRA----------DNVSVFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L S G + L+ +P VVV+CAA P ++DPD+A ++NV ++ L+S +
Sbjct: 48 LGSPVGVEKF-LEESKPRVVVHCAAQRYPDKVDSDPDAARALNVAATKS--LASLCAARG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LI++STD V+ G ++ Y+ + + P N+YG++K+ E + E+ +L
Sbjct: 105 IFLIYISTDYVFSGKPGEAPYENDAQTGPTNLYGQTKLDGEHAMLEEYKQAGREGLGVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG Q +P + I +D++ + KV+ H R P DV ++ +
Sbjct: 165 RVPVLYG-QAETPAESATNI-LLDTLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDIA 222
Query: 230 NRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYST-SLIKPVSASSVDRGVQSP 286
+++ D + +L DR+++ ++ + AEI S +I + + VQ P
Sbjct: 223 VKYIEADDRSSFPKILQFSSEDRMTKYEICQTFAEIMDLSMDGIIANTEGNDPNASVQRP 282
Query: 287 ADISMDITKLVQTLNIDPVT 306
D + I K ++ L ID T
Sbjct: 283 YDCHLSI-KALKNLGIDVST 301
>gi|386001792|ref|YP_005920091.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta harundinacea 6Ac]
gi|357209848|gb|AET64468.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta harundinacea 6Ac]
Length = 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V+ + AAL+ CE+DPD A NV + ++ L+++STD V++G
Sbjct: 63 PQVIFHTAALTDVDRCEDDPDLAWRTNVLGT--ERVARAAAEVGAHLVYVSTDYVFDGEG 120
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ--- 193
Y+EED PVN Y ++K++AE F C A R+S+IYG + P S +
Sbjct: 121 GMYREEDRTDPVNCYARTKLSAEGF----CDLVA--RTSVIYGAR-----PASGKVNFAL 169
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
W+ L+ GE+V D+ P ++ +++L R LS + ++ G RVSR
Sbjct: 170 WLIERLAAGEEVRIVTDQFITPTLNTNLARMLLEAGERRLSG------VYHMAGATRVSR 223
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A +A G LI P S + + P D S+D +K + L P ++ ++
Sbjct: 224 YDFAVEIARAFGLDEGLIAPSRISDMRWRAKRPRDSSLDTSKAARLLAEGPSPLRESLR 282
>gi|91202782|emb|CAJ72421.1| similar to dTDP-6-deoxy-L-lyxo-4-hexulose reductase (Rmld)
[Candidatus Kuenenia stuttgartiensis]
Length = 288
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGL---SEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++L++G G LG L GL SE E +P V HS +++
Sbjct: 2 KILIIGSNGALGWELRNGLPHLSETEKQPLSVICASHS------------------QIEI 43
Query: 62 KSGSG-FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S F+A+A PDV++NCAA + CE + A ++N + L+ +N
Sbjct: 44 TNASNTFEAIARTM--PDVIINCAAFTDVDACETNIGKAYAVNADGAKNVALAG--KNLH 99
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G K+ Y E D P++VYG+SK A E+ + E N+ I+R S +YG
Sbjct: 100 ARVIHISTDYVFDGAKNTPYNETDLPRPLSVYGRSKRAGEEAVQEINGNYTIIRISRLYG 159
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ V K L + V+S D+ P Y D+V + W +
Sbjct: 160 QHKSNFVTKILHLGLEKHVVS------VVTDQFGSPTYAADLVHAL------WYVLSLDL 207
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ ++ S + A + + SL + + A R P + S++ TK VQ
Sbjct: 208 HGIYHIANDGICSWYEWAREIFRLSNIQVSL-QSIKAEDFKRAATVPQNSSLNCTKFVQ 265
>gi|329766671|ref|ZP_08258214.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329136926|gb|EGG41219.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 311
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 40/309 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KK++ V+G +G LG ++ ++ Y+V T++ T + H V + L
Sbjct: 2 KKKICVIGASGLLGYKIIHSCND-----YEVFGTYNQT--------QINHDHVHL-IQLD 47
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S D + QPD +VN AA++ CE + A +NV + + +
Sbjct: 48 ITSPADCEKIIEIQPDYIVNTAAITNVDYCEKYKEKAHLVNVIGT--QNIVKIAKKLNCK 105
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--- 179
L+H+STD ++ G YKE+D PVN YG++K+ +E + + ++ ILR++++YG
Sbjct: 106 LVHISTDGIFSGNDLNYKEDDPPNPVNYYGQTKLESENAV-KTLDDYLILRTNVLYGYVS 164
Query: 180 -------PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ P+ L WI S L K +K+ +D+ P ++ KII+
Sbjct: 165 KNIIKSRSNYLKPINFGL---WILSELHKNKKIRIVNDQFSNPTLADNLAKIIMDCI--- 218
Query: 233 LSEDKQMQLLLNVGGPDR--VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
++ L+ D VSR+ ++ +A+ G+S +LI +S ++ P+
Sbjct: 219 -----KINLIGTFHSTDLTCVSRLHFSKKIAQKFGFSENLITEISLKDLNLLAPRPSKTC 273
Query: 291 MDITKLVQT 299
+D +K+++
Sbjct: 274 LDCSKIIKN 282
>gi|448737105|ref|ZP_21719157.1| dTDP-4-dehydrorhamnose reductase [Halococcus thailandensis JCM
13552]
gi|445804318|gb|EMA54575.1| dTDP-4-dehydrorhamnose reductase [Halococcus thailandensis JCM
13552]
Length = 301
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 30/307 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG G LG +++ ++ + ++ A T+H+T + D H ++D++
Sbjct: 2 QLLVVGANGLLGSNVI---AKALARDWECAGTYHAT---EPAFDVPLH-----ELDIRDT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F + L + D V+NCAA++ CE +P+ A ++N + L+ ++E
Sbjct: 51 DRFTTI-LDAHEFDAVLNCAAMTDVDGCERNPEHAHAVN--GAAPGELARVCADRELAFC 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL-RSSIIYGPQT 182
H+STD V++G + Y E +P VYG+SK+ E+ + EK + A+L R S IYG
Sbjct: 108 HVSTDYVFDGNAERRYTESAPTSPQQVYGESKLTGERTV-EKAHDGALLARLSFIYGTHG 166
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ P W+ L KGE + F D+ P ++ L L+ D +
Sbjct: 167 ATGTLTGFP-AWVSDQLRKGESIPLFADQTVTPSRAGQAATTLIDL----LAAD--VTGT 219
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV------SASSVDRGVQSPADISMDITKL 296
+++ ++ + E + E S SL PV S S+VDR P +D+ K+
Sbjct: 220 VHIASRSCITPYEFGERIRERLAASRSLDVPVELLAEGSQSAVDRAATRPLHTCLDVEKV 279
Query: 297 VQTLNID 303
L+ D
Sbjct: 280 EHVLDRD 286
>gi|428305359|ref|YP_007142184.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
gi|428246894|gb|AFZ12674.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
Length = 288
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 36/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R+L+VG G LGQ L Q L PY +V A T +DL
Sbjct: 3 RILIVGSAGQLGQELQQTLI-----PYGEVVAVDRKT------------------LDLSQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + QP +V+N AA + E +P++A IN + + L+ E + +L
Sbjct: 40 PDQIRELVQQV-QPQIVINAAAYTAVDQAEKEPETARMINAIAPTI--LAQEVEKLKAIL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K+ Y EED P+++YG+SK+A E+ I E C ++ ILR++ +YG
Sbjct: 97 IHVSTDYVFDGSKNHPYTEEDITNPLSIYGQSKLAGEQGIQENCQSYLILRTAWVYGAYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S K++ + S+ E+V D+ P + +D+ I +T+ L D +
Sbjct: 157 KSNFVKTML-----RLGSEREEVRVVTDQIGTPTWAKDIADAIAQVTS--LKPDPGIYHY 209
Query: 243 LNVGGPDRVS-RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
N G V + E + + P++ S Q P + K+ LN
Sbjct: 210 TNSGVASWYDFAVAIFEEAKNLVPLKVQRVIPITTSEYPTPAQRPTYSVLSCRKISSVLN 269
Query: 302 IDPVTYKDGVKLTL 315
+P ++ ++ L
Sbjct: 270 TNPPHWRQELRQML 283
>gi|284039662|ref|YP_003389592.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74]
gi|283818955|gb|ADB40793.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74]
Length = 299
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 18/310 (5%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LGQ L+ GL + +A LP + + +D+
Sbjct: 2 KKILLTGANGLLGQKLV-GLLTKQPNVELIATARGENRLP------FSDGYTYRAMDITD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PDVV++ AA++ CE D+ + NV + V ++ L
Sbjct: 55 RQQVLDV-IGDVRPDVVIHGAAMTDVDKCEVQKDACWAQNVHA--VEYIIEACRAANAFL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+STD +++G Y E+ E P++ YG SK A E + +AI R+ ++YG
Sbjct: 112 VHVSTDFIFDGAAGPYDEDAEANPISFYGWSKQAGESAVRHSDIRWAIARTVLVYG--IA 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W+ L G+ ++ D+ R P D+ +L D++ + +
Sbjct: 170 HDMSRSNIILWVKKSLEDGKNIKVVTDQWRSPTLAEDLA------MGCFLIADQEAEGIF 223
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N+ G + ++ +MA A+ G SLI AS+ + + P + K L +
Sbjct: 224 NISGKEVLTPYEMAIQTADYFGLDKSLIAQADASTFTQVARRPPRTGFILDKARTVLGYE 283
Query: 304 PVTYKDGVKL 313
P ++ +G+ +
Sbjct: 284 PHSFAEGIAV 293
>gi|110636916|ref|YP_677123.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC
33406]
gi|110279597|gb|ABG57783.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC
33406]
Length = 298
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 144/310 (46%), Gaps = 20/310 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G G LGQ L+ S + KP + AT ++ D +++ +D+ S
Sbjct: 2 KILITGSNGLLGQKLV---SLLYLKPEITLIATARGANRDEIYED-----YIYESMDITS 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V K +PD V++ AA++ CE + ++ + N+ S V + + L
Sbjct: 54 EENVLKVFRKH-KPDAVIHTAAMTHVDQCELNKEACVDQNITS--VKHIVKACKEVGAFL 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+STD +++G + EE+ PVN YG +K AEK + +AI R+ +++G +
Sbjct: 111 LHVSTDFIFDGTRGPLTEEEIPNPVNYYGWTKWEAEKAVENSGLKWAIARTVLVFG--VV 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + W+ + L + +++ +D+ R P D+ WL Q + +
Sbjct: 169 QDMSRSNIVLWVKNNLEQKKEINVVNDQWRTPTLAEDLA------MGCWLIVKNQAEGIF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N+ G + +S ++A VA++ LIK +S+ + P I K + L
Sbjct: 223 NISGEEMLSPYELAHKVADVWKLDKGLIKQADSSTFTQPALRPPKTGFIIDKAKKQLGYK 282
Query: 304 PVTYKDGVKL 313
P T ++G+ L
Sbjct: 283 PHTLEEGLDL 292
>gi|223998907|ref|XP_002289126.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974334|gb|EED92663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 331
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 139/323 (43%), Gaps = 91/323 (28%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEG-----------------------KPYDVAATHHST 40
K++L+ G +GY+GQH++ +S I G + Y+V ++S
Sbjct: 8 KKILITGSSGYVGQHMISHIS-IHGLVVPAPSSSDVSASPLSPSASVNQRYEVYCAYNS- 65
Query: 41 PLPQL------LLDALPHSFVFFDVDLKSGSGFDAVALKF---------GQPDVVVNCAA 85
LP L D H V ++S S D + G DV+++ AA
Sbjct: 66 -LPNFEDDLSNLFDGTAHKLHPSIVKMQSVSNIDFCNPNYIHKIQQACGGTVDVIIHLAA 124
Query: 86 LSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI 145
LS P CE+ + A IN P L++ + ++++STDQVYEG K FY E DE
Sbjct: 125 LSSPFYCESHAEEAWKINCPVELLSLKAP--------IMYMSTDQVYEGTKQFYGENDET 176
Query: 146 APVNVYGKSKVAAEK------------------------FIYEKCSN-------FAILRS 174
PVN+YG++K+A E+ F+ SN ILRS
Sbjct: 177 VPVNMYGRTKLAFERILVGGLGSSTLLTAKELGLCTLPEFLTNVISNNLRPHNKSVILRS 236
Query: 175 SIIYGPQTISP--VPKSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
S+I G T P K P +Q+I+ L ++F +E R V++ DV+ I
Sbjct: 237 SLILGKPTPFPNGCRKGFPSFLQFIEDRLKNQISTDYFVNEYRSVVHLEDVIGSIRHFVL 296
Query: 231 RWLS------EDKQMQLLLNVGG 247
+ LS D+ +Q + N+GG
Sbjct: 297 KALSPNDDTAADEGVQ-VFNLGG 318
>gi|297184077|gb|ADI20196.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 298
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 145/309 (46%), Gaps = 19/309 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L G G LGQ + ++ + AT + + A + +D+ +
Sbjct: 2 KILFTGSNGLLGQKI--AVATANYPQHSFLATSRGANRTKAMGTA-----TYASMDITNA 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V F +PDV+++ AA++ CE PD A +NV + N ++ E ++ +
Sbjct: 55 EDVSNVVGDF-EPDVIIHGAAMTHVDECELQPDQATLLNVEGTR-NIANAANEVGAHV-V 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD +++G YKE+ + P++ YG +K+ AE I + S ++ILR+ ++ G
Sbjct: 112 HISTDFIFDGKDGPYKEDAKAQPLSHYGWTKLEAEDIIKDLPS-WSILRTVLVIG--MAE 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + W L KG+ + D+ R P D+ + L L+ D+ Q + N
Sbjct: 169 DLSRSNIVLWAKGALEKGQPINVVDDQFRTPTLAEDLAQGAL------LAADQCAQGVFN 222
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ GPD +S + VA G S + ++++++ + P DI+K + L +P
Sbjct: 223 ISGPDFMSIYDLVGQVAAYFGLSMESVTRTDSTTLNQPAKRPPRTGFDISKARKELGYEP 282
Query: 305 VTYKDGVKL 313
T+ +++
Sbjct: 283 HTFNQALEI 291
>gi|116748974|ref|YP_845661.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
gi|116698038|gb|ABK17226.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
Length = 294
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 29/316 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G LG ++ + ++ +++ H P+ +D + V ++
Sbjct: 2 KRLLLTGASGLLGWNVCR----LKRDRWEIHGVAHRHPI---AIDGVRGHVVDLTDRAQT 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F + +P V++ AA + C+ + + INV + +++
Sbjct: 55 ADMFRRL-----KPRAVIHAAAATNVNWCQENRAESYRINVEAPF--HIAALCAESAIPY 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +S+D V++G+ Y E D ++PVNVYG+ K AE+ + + N I R +++G
Sbjct: 108 LFISSDMVFDGLSPPYGERDPVSPVNVYGEQKARAEEMVAAEYPNAVICRLPLMFG---- 163
Query: 184 SPVP-KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P P S +Q + + G ++ F DE R PV V+ I LAL +Q
Sbjct: 164 EPGPFSSGFVQPMIEAMRSGRELPLFTDEIRTPVSAESAVEGIFLAL--------RQTGG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+L++GG +RVSR ++A + G+ + ++ V P D+S+D T+ +L
Sbjct: 216 ILHLGGRERVSRYAFGLLLARLAGFGEAGLRACRQRDVKMPAPRPRDVSLDSTRAF-SLG 274
Query: 302 IDPVTYKDGVKLTLAA 317
P +D ++ LA+
Sbjct: 275 YSPGRIEDELRRLLAS 290
>gi|388579495|gb|EIM19818.1| methionine adenosyltransferase II, beta [Wallemia sebi CBS 633.66]
Length = 294
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 24/288 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G +G LG+ +L S +G V +S +L+ DL
Sbjct: 3 KVLVTGASGLLGRAILDNFSN-DGS-IQVTGLAYSRSSDKLI-----------KCDLNDE 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V ++ QPDV+++CAA P V +NDP + +NV S LS +N +I
Sbjct: 50 KAIEGV-IREQQPDVLIHCAAERRPDVAQNDPAATEKLNVDVS--GNLSRLMKNIGGSII 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y D P+N+YGK+K+A EK + + ILR ++YG +
Sbjct: 107 YISTDYVFDGTKPPYTTTDTPNPLNLYGKTKLAGEKAVTQNNDKSVILRVPVLYG--RVE 164
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+S ID+V +G+ + H R P V +V + ALT +++ +++
Sbjct: 165 NTKESAVTILIDAV-KEGKAKKMEHYANRFPTNVDNVAIALNALTKNI----QKVPQIVH 219
Query: 245 VGGPDRVSRVQMAEVVAEIRGY-STSLIKPVSASSVDRGVQSPADISM 291
+ ++ +MA AEI G S LI + D V P D +
Sbjct: 220 YSSREAYTKYEMACTFAEILGLPSDHLIADTEEPTGDAAVSRPKDCQL 267
>gi|269986680|gb|EEZ92960.1| dTDP-4-dehydrorhamnose reductase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 282
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 35/302 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ LV+GG+G++G +L + + A+ H +L D+
Sbjct: 2 KTLVLGGSGFIGYYLAKYFNATS------ASAHQKEGYIKL--------------DITDK 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V K +P++++N A++ +CE + ++AM +N V WLSS ++ +
Sbjct: 42 EEVSEVLNKI-KPELIINSTAIADVDLCEKEKETAMLVN--GYAVEWLSSLSKEIGAEFV 98
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI-LRSSIIYGPQTI 183
+STD V++G YKEED P+N YGKSK+ E+ N AI LR + YG
Sbjct: 99 QISTDYVFDGFTGNYKEEDNPNPINEYGKSKLIGEE---NALKNDAIVLRIEMPYGINVA 155
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
K++ + + + L +G+ V D+ P +V D+ K + L K +
Sbjct: 156 K--NKNVFFESVINNLKEGKTVNAAVDQIISPTFVEDIPKAVEVLV------KKGANGIF 207
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ + SR + ++A++ + ++IKPV + + P + ++I K+ + I
Sbjct: 208 HLASKEHFSRFEFVNIIADVFNFDKTIIKPVKLADFKMLAKRPKNTFLNIDKISKFYEIK 267
Query: 304 PV 305
P+
Sbjct: 268 PL 269
>gi|127514272|ref|YP_001095469.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4]
gi|126639567|gb|ABO25210.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4]
Length = 307
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 12/243 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+V+++CAA P V E DP++A ++N+ ++ L+ + L ++STD V++G
Sbjct: 59 KPEVILHCAAERRPDVSERDPEAAKALNLAAT--RQLAQAAKANGAWLCYISTDYVFDGT 116
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y EED+ P+N YG++K E+ + E FA+LR I+YG + + +S + +
Sbjct: 117 SPDYGEEDQTYPLNFYGETKREGEQALIEVSREFAVLRLPILYG--RVESLDESAVLVML 174
Query: 196 DSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
+++ +V D+ R P D+ ++ L R + + + + G +R+++
Sbjct: 175 KQLVN---QVPTQQDDWAVRSPTSTLDIANALVKLVARQ-QQAGDVAGIYHFTGTERMTK 230
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 313
QM +AEI G S+ I P S+ S + P D S+ + +L + ++ GVK
Sbjct: 231 YQMLLKMAEIMGLSSKHISPQSSPS--DLAKRPKDCSLSMARLKSLAIKSEIDFEQGVKY 288
Query: 314 TLA 316
+L+
Sbjct: 289 SLS 291
>gi|406863767|gb|EKD16814.1| RmlD substrate binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 644
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 33/317 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++ L+ G TG LG+ +++ E +DV T + P +L +DL S
Sbjct: 331 RKALITGATGLLGRQVVKAF---ERGGWDVKGTGFTRANPPTILK----------LDLGS 377
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A A++ +P VVV+CAA P C++DP ++NV +S L+ LL
Sbjct: 378 EADVSA-AIQELKPQVVVHCAANRFPDKCDSDPVGTRALNVEASAS--LARLCAASSTLL 434
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
I++STD V+ G++ + Y+ +P N YG +K EK + YEK +LR
Sbjct: 435 IYISTDYVFPGLEGDAPYEATSTPSPPNSYGLTKWDGEKAVLAEYEKAGKQGWGVVLRVP 494
Query: 176 IIYGPQTISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG +P ++ + +D+V KG+ V+ H R P DV +++ + +
Sbjct: 495 VLYG-NAGTPAESAVNVL-MDAVYKAQEKGQGVKMDHWAIRYPTNTEDVGRVLQDVATHY 552
Query: 233 LSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADI 289
LS D + L +L D++++ ++ E+ AEI G ++ + + V+ P D
Sbjct: 553 LSTDDKSSLPTILQFSSEDKMTKYEICEIFAEIMGLPLDGMVANTEGNDPNASVKRPYDC 612
Query: 290 SMDITKLVQTLNIDPVT 306
+ TK+++ L I+ T
Sbjct: 613 HLS-TKVLKELGINVAT 628
>gi|254443027|ref|ZP_05056503.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
gi|198257335|gb|EDY81643.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
Length = 305
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 25/308 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G LG + + + V HH P P L +DL
Sbjct: 2 KILLTGASGLLGSAFARSAKR---RGHQVIGIHHQNPAPSSDLAQT------RTLDLTDL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +A+ L+ PD +VNCAA+S P CE P + +NV +L L+ + LI
Sbjct: 53 NALEALTLEHF-PDAIVNCAAISEPSACEAKPTHSRLVNV--ALPEKLALLARHLFATLI 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYG--PQ 181
H+S++QV++G Y + +P N Y + K+ +E ++E + FA LR ++ G P
Sbjct: 110 HISSEQVFDGTAHIYHRDSPPSPPNEYARQKLDSELRVHELAAEFATTLRLPLLIGNSPT 169
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L W + G+ F DE R P + ++ L R ++
Sbjct: 170 GTRSLHERLFASW-----AAGQPTPLFTDEYRQPCLADNAADAMVELCER-----NDLKG 219
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ + G +SR ++ + + + G +LI+ R A +S D+ L L
Sbjct: 220 VYSWAGQKTLSRYEIGQRILKHFGLPETLIQAAQRGDDPRFAHRQARLSFDLAPLASKLK 279
Query: 302 IDPVTYKD 309
P D
Sbjct: 280 TQPQGLSD 287
>gi|379335378|gb|AFD03360.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium W5-47b]
Length = 295
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 149/301 (49%), Gaps = 32/301 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+K L+ GG+G LGQ+L +E D T ++ + F D
Sbjct: 1 MSRK-FLITGGSGLLGQYL-----NVEAAKEDDILTIYNNNVGNC------SEFKSTKAD 48
Query: 61 LKSGSGFDAVALKFG--QPDVVVNCAALS--VPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ + F+ + F +PDVV++ AA++ +P +N P ++NV ++ ++
Sbjct: 49 I---TNFNMMKEIFSSSKPDVVIHTAAVTNPIPLRGQN-PKDVYNVNVNAT--KNIADLC 102
Query: 117 ENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ + LI++STD VY G + S KEE ++ PV++Y ++K+ E + E N+ ILR++
Sbjct: 103 KQFDAKLIYISTDLVYAGYRGSMLKEEAKLIPVSLYAETKLMGEMKVIETLENYLILRTA 162
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++YG + L G V+ F D+ R P++++D +I + + ++
Sbjct: 163 LLYG---FGLNHSRCHFHKMTEELKNGNPVKLFVDQFRTPIFLQDAAEITIKIAQMDINS 219
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ +N+GG +RVSR ++ + + + Y +L++ VS + + D+S++ K
Sbjct: 220 ET-----INLGGVERVSRYELGKFLCSVGNYDKTLLQKVSLDDIPE-LPKVEDVSLNTDK 273
Query: 296 L 296
L
Sbjct: 274 L 274
>gi|392310811|ref|ZP_10273345.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas citrea NCIMB
1889]
Length = 289
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 143/299 (47%), Gaps = 35/299 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K+V++ G TG LG+ LL L E+ G + A S + +L L+ F D
Sbjct: 2 KKVMITGATGMLGRALLNTLKPIFEVIGTGFSRA----SDNIAKLDLNDQEAICQFLDTH 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QPDV+++ AA P VCE P+ +++NV ++ +L+ + +
Sbjct: 58 ---------------QPDVLIHAAAERKPDVCEQSPEQTLALNVQAT--QFLAQQCKLRN 100
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI +STD V++G ++ Y E P+N YG+SK AE+ + +++R ++YG
Sbjct: 101 IRLIFISTDYVFDGTQAPYIENSATNPLNFYGQSKQQAEQAVLANSELHSVIRVPVLYG- 159
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSEDKQM 239
++ + +S + I +S+ + E H R P +V D+ ALT R L + +
Sbjct: 160 -DVTHLAES-AVTVIAEQISETQPSEHDHWAIRYPTHVEDI-----ALTLRDLLKQPDNL 212
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ ++ +S+ MA ++A+ R Y SL+ + S + Q P + ++ T+L +
Sbjct: 213 GGIFHISNHQAMSKYDMACIIADHRNYPRSLLTALPTPS--QTAQRPYNCALKDTRLTK 269
>gi|217971668|ref|YP_002356419.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223]
gi|217496803|gb|ACK44996.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223]
Length = 304
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 148/293 (50%), Gaps = 25/293 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAF-IAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATDPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ + + V+ H R P D+ + I + + + E +Q +
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAIDKMIAQHI-EAPIVQGIY 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + +++ QM + +I ST+ + P S + + + P D S+ +L
Sbjct: 221 HFSAAETMTKYQMLLTLGDILQLSTAHLTPESTPTDN--AKRPRDCSLSCARL 271
>gi|407461633|ref|YP_006772950.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045255|gb|AFS80008.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 304
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 27/304 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+++ ++L++GGTG +G L+ K +D+ T+ T LP L L + + +
Sbjct: 6 INRPKLLILGGTGLVGS----TLASYAQKIFDIHLTY-CTNLP---LSTLSSTKISLPDE 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L S + + +++ PDV+V+ + C+ + D A ++V +L ++ F
Sbjct: 58 L---SKLENLIVQY-DPDVIVHTVSHPSVDWCQENRDLANFLHV--NLTENIAKFASKIN 111
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LI+LSTD V++G ++ Y E D P+N YG +K+ AEK + + N +LR ++IYG
Sbjct: 112 STLIYLSTDWVFDGTRNNKYTENDSTNPINHYGVTKLLAEKIVLDYPQN-VVLRPAVIYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
KS WI L + + V+ D+ P V D+ I+ + + +
Sbjct: 171 WH-----KKSRFTNWIIDTLKEKKYVDPHVDQYATPTLVDDLALAIIKII------ENKS 219
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
L + G V+R + A +AEI T+LIKPV+ S + P +D +KL
Sbjct: 220 SGLFHSTGKSCVNRFEFATQIAEIFNLDTNLIKPVTQSEKPQKAPRPNRTCLDSSKLENL 279
Query: 300 LNID 303
+N +
Sbjct: 280 INFN 283
>gi|373951167|ref|ZP_09611128.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183]
gi|386323014|ref|YP_006019131.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175]
gi|333817159|gb|AEG09825.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175]
gi|373887767|gb|EHQ16659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183]
Length = 304
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 151/299 (50%), Gaps = 26/299 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSERNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAVTHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + ++ ++ + + V+ H R P D+ + I + + + E +Q +
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAIDKMIAQHI-EAPIVQGIY 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ + +++ QM + +I ST+ + P S + + + P D S+ +L TL I
Sbjct: 221 HFSAAETMTKYQMLLTLGDILQLSTAHLTPESTPTDN--AKRPRDCSLSCARLA-TLGI 276
>gi|417759221|ref|ZP_12407258.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000624]
gi|417777161|ref|ZP_12424986.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000621]
gi|418670791|ref|ZP_13232153.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000623]
gi|409944696|gb|EKN90276.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000624]
gi|410573038|gb|EKQ36095.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000621]
gi|410582220|gb|EKQ50019.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000623]
Length = 294
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 39/320 (12%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDV 59
S K++L+ G +G LG +L + + + H + + + ++ +D L F+ V
Sbjct: 3 SSKKILITGASGLLGHYLSNFFQTSRYQIFALKGKHSVNVSGVKEIEIDLLD----FYKV 58
Query: 60 -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL LK PD +++CA L+ CE + A I++ S + ++
Sbjct: 59 TDL----------LKKIHPDYIIHCAGLTNVDQCERNVVLAEKIHIDLSFL--VAKVAGQ 106
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G + E+ + P+NVYG++K AEK + S ILR++ +
Sbjct: 107 INSKIIHISTDHLWDGSEPMVIEDTPVCPLNVYGRTKAEAEKAVISVNSKALILRTN-FF 165
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ EK++ F D P+ + + ++L R +
Sbjct: 166 GPGLEWRQSLS--------DWIITSLNRNEKIKAFSDVFFTPISMFHLSNLML----RLI 213
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+E+ + + +V G +R+S+ A +++I LI+ +S + P D+S+
Sbjct: 214 TEEAKG--IYHVVGSERISKYDFAVSISKILNKPADLIQAISIKDIQLFAPRPLDMSLST 271
Query: 294 TKLVQTLNIDPVTYKDGVKL 313
K+ + LN + T + GV
Sbjct: 272 KKVSKFLNEEMPTIQSGVNF 291
>gi|294142523|ref|YP_003558501.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12]
gi|293328992|dbj|BAJ03723.1| dTDP-4-dehydrorhamnose reductase, putative [Shewanella violacea
DSS12]
Length = 306
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++++ G TG LG+ + ++IE + + V AT S + + +DL +
Sbjct: 3 KIMITGATGLLGRAVK---TQIEASQIHQVIATGFSRAQAGI-----------YKLDLTN 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D + QPD++V+CAA P V E +P +A+++N+ ++ L+ +
Sbjct: 49 TQAADEF-IAHHQPDIIVHCAAERRPDVSELNPSAALALNLGAT--KALAESASKHGIWI 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E + P+N YG+SK E+ + +FA+LR I+YG +
Sbjct: 106 IYISTDYVFDGSAPNYAEFHKPNPLNFYGESKWQGEQALLATSKDFAVLRLPILYG--QV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + ++ ++ K + E H R P +D+ I + + +++ +++ +
Sbjct: 164 ETVSESAILILLNHLMDK-QTQEVDHWAVRSPTSTQDIALAIEKMIDLQVAQ-QELSGIY 221
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G + +S+ QM + E+ G + PVS S D + P D +++ +L
Sbjct: 222 HFSGKETMSKYQMLLTLGEVLGLDVDHLLPVSEPSDD--AKRPKDCTLNCDRLALLGITS 279
Query: 304 PVTYKDGV 311
V +K GV
Sbjct: 280 QVDFKSGV 287
>gi|388254825|gb|AFK24940.1| dTDP-4-dehydrorhamnose reductase [uncultured archaeon]
Length = 315
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 58/328 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-----------LDA 49
M KK++LV+G +G G ++Q + +DV T+++ L L+
Sbjct: 1 MEKKKMLVLGASGLTGYKVMQ----LAKSRFDVQGTYNARSTSYDLLLKLDLSKPDELNK 56
Query: 50 LPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV 109
L H +PDVVVN AL CE+ P+ A IN +++V
Sbjct: 57 LMHEV---------------------KPDVVVNTTALHNVDYCESHPEEAYHIN--AAMV 93
Query: 110 NWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
++ +N +H+STD V++G K Y E D P +VY KSK+ E F C +
Sbjct: 94 KEMAEHCDNIGARFVHISTDFVFDGRKGAPYTESDPPNPESVYAKSKLEGETFA-RTCQS 152
Query: 169 FAILRSSIIY--------GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD 220
+ ++R+S++Y G + S P + + W S L++ E+++ D+ P
Sbjct: 153 WCVIRTSVVYGWTPLETQGSTSSSGKPMNFAL-WALSKLARAEELKIVSDQFTSPTLADV 211
Query: 221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
+ +I+ + +++ L +V G SR + +A + GY ++PV +
Sbjct: 212 LAAVIVKVAGTAAGKNE----LYHVAGTSCTSRYEFTRKLASMMGYRADAVQPVESKLFA 267
Query: 281 RGVQSPADISMDITKL-----VQTLNID 303
+ + PA +D +K+ + LN+D
Sbjct: 268 QVAKRPALSCLDCSKVQSALGYRLLNVD 295
>gi|448416594|ref|ZP_21578834.1| RmlD substrate binding domain superfamily protein [Halosarcina
pallida JCM 14848]
gi|445678886|gb|ELZ31368.1| RmlD substrate binding domain superfamily protein [Halosarcina
pallida JCM 14848]
Length = 282
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 19/271 (7%)
Query: 32 DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
DVA T+HST P + H D++ F+++ L+ +PD VVNCAA++
Sbjct: 11 DVAGTYHSTQ-PAFEFPLVQH-------DIRDTERFESM-LREHEPDAVVNCAAMTDVDG 61
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNV 150
CE+ P++A +N L+S +H+STD V++G + Y E+ P+
Sbjct: 62 CESQPEAAFEVN--GDAPGALASICAEHSVPFVHVSTDYVFDGEAAEPYSEDATTNPIQE 119
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YGKSK+ E + E ++R S +YG + + P W+ L G++V F D
Sbjct: 120 YGKSKLEGEHQVREVDGETMLVRLSFVYGVRGDTDELVGFPA-WVRDTLDAGDEVPLFVD 178
Query: 211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL 270
+ P + IL L D + +V V+ + + +A+++G +L
Sbjct: 179 QRITPSRAGHAAEAILELL------DAEAYNCYHVASRSCVTPHEFGQAIADVQGADNTL 232
Query: 271 IKPVSASSVDRGVQSPADISMDITKLVQTLN 301
++ + V R P D ++++K+ L
Sbjct: 233 VRESKQADVSRDAARPQDTCLNVSKVEDALG 263
>gi|76879702|dbj|BAE45720.1| putative protein product of Nbla02999 [Homo sapiens]
Length = 259
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+ + +S D V + H + R P +V+DV + L + +
Sbjct: 188 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239
>gi|300865161|ref|ZP_07109985.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC
6506]
gi|300336851|emb|CBN55135.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC
6506]
Length = 287
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 27/297 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV+GG+G +G HLLQ + + ++V T+ + P L+ + ++ + +S
Sbjct: 2 KVLVIGGSGLVGSHLLQTCHQ---RGWNVTGTYQNFAQPGLIPLQITNAAAVRSLITES- 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
QP+VV A S CE +P+ INV L ++ T + L+
Sbjct: 58 -----------QPEVVFLPAFRSNVDYCEQNPEETYQINVVGCLN--VAHATRDVRAKLV 104
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D V+ G Y+E D+ P+ VYG K+ E+ I E ++ I R + +YG +
Sbjct: 105 FYSSDYVFNGKNGPYQEIDKPDPICVYGLQKLEVEEKISELLDDYLICRIAWVYGQEKQG 164
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K+ ++ I S+L+ + + D+ P D+ + L + + L +
Sbjct: 165 ---KNFVLRLI-SMLTNNQAIRVPQDQVGSPTLADDIGEASCRLV------EVGAKGLFH 214
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ G D ++R Q A +AE+ G T + PV S +++ P M +LVQ LN
Sbjct: 215 ITGIDCMNRYQFALKIAEVFGLQTDTLLPVMTSELNQAAARPLKCGMRCDRLVQNLN 271
>gi|348539164|ref|XP_003457059.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Oreochromis niloticus]
Length = 325
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 147/309 (47%), Gaps = 23/309 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G TG LG+ + + E + V T + P+LL DL
Sbjct: 19 RVLVTGATGLLGRAVCR---EFHSAGWTVIGTGYRRARPRLL-----------RCDLTDE 64
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ +PDV+V+CAA P V E ++A+++NV ++ + L+ L +
Sbjct: 65 DAVRGLLHEY-KPDVIVHCAAERRPDVMERHTEAAVNLNVHAT--STLAKEAATCGALFL 121
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G Y E+D P+NVYG+SK+ E+ C +LR +++G +
Sbjct: 122 YISTDYVFDGRNPPYGEDDSPNPLNVYGRSKLEGERETLRHCPGAVVLRVPVLFG--EVE 179
Query: 185 PVPKSLPIQ-WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S+ ++ + E H R P RDV + L+ R +D ++ +
Sbjct: 180 SVTESVVTSLYLKVQEASEESCTLDHVLQRFPTDARDVAAVCRKLSER-ARQDPSIRGIF 238
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
+ G +++++ +MA +A+ +S + P++ ++ P + ++ ++L + L++
Sbjct: 239 HFSGKEQMTKYEMAVAIAQAFNLPSSHLIPLTEQPAASALR-PINSQLNCSRLELLNLSV 297
Query: 303 DPVTYKDGV 311
+P + +
Sbjct: 298 EPRPFTSAI 306
>gi|455789097|gb|EMF41033.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 294
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 153/320 (47%), Gaps = 39/320 (12%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDV 59
S K++L+ G +G LG +L + + + H + + + ++ +D L F+ V
Sbjct: 3 SSKKILITGASGLLGHYLSNFFQTSRYQIFALKGKHSVNVSGVKEIEIDLLD----FYKV 58
Query: 60 -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL LK PD +++CA L+ CE + A I++ S + ++
Sbjct: 59 TDL----------LKKIHPDYIIHCAGLTNVDQCERNVVLAEKIHIDLSFL--VAKVAGQ 106
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G + E+ + P+NVYG++K AEK + S ILR++ +
Sbjct: 107 INSKIIHISTDHLWDGSEPMVIEDTPVCPLNVYGRTKAEAEKAVISVNSKALILRTN-FF 165
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ EK++ F D P+ + + ++L R +
Sbjct: 166 GPGLEWRQSLS--------DWIITSLNRNEKIKAFSDVFFTPISMFHLSNLML----RLI 213
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+E+ + + +V G +R+S+ A +++I LI+ +S + P D+S+
Sbjct: 214 TEEAKG--IYHVVGSERISKYDFAVSISKILNKPADLIQAISIKDIQLFAPRPLDMSLST 271
Query: 294 TKLVQTLNIDPVTYKDGVKL 313
K+ + LN T + GV
Sbjct: 272 KKVSKFLNEGMPTIQSGVNF 291
>gi|87311330|ref|ZP_01093451.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645]
gi|87285910|gb|EAQ77823.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645]
Length = 348
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 16/229 (6%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY-EGVKS 137
V+NC + CE DP A IN S V L + E + L+ LS D VY + +
Sbjct: 89 AVLNCGGCCALKSCELDPSMAWRINFES--VRNLLTVLEGSDTRLVQLSIDLVYSDKLGG 146
Query: 138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
Y E + PV +YGK+ AAE I + A+LR S+ P +S + I WI S
Sbjct: 147 GYLEHEPTDPVTIYGKTMAAAENLIQLERPESAVLRISL---PMGVSFNGHAGAIDWIQS 203
Query: 198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
K + ++DE R P Y + ++I + R L+ + + GGP R+S Q+A
Sbjct: 204 RFMKNKPATLYYDEIRTPTYTDCMNRVIDDVLGRDLAG------IFHAGGPRRLSLYQIA 257
Query: 258 EVVAEIRGYSTSLIKPVSASSVDRGVQSP--ADISMDITKLVQTLNIDP 304
+++ + Y+ + + V+ G P D++MD TKL L +P
Sbjct: 258 QIINRVGDYNPHNL--MGCMRVEAGPIPPRAGDVTMDSTKLADQLGYEP 304
>gi|386811463|ref|ZP_10098689.1| TDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
gi|386406187|dbj|GAB61570.1| TDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
Length = 331
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-F 138
V+N A + CE + A +NV S++N L + +E LIHLSTD V+ G S
Sbjct: 73 VLNGAGSCALKSCEMNSVLAYRVNV-QSVLNVLEMMGD-QEIRLIHLSTDLVFPGKPSGL 130
Query: 139 YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSV 198
Y EE ++PV +YGK+ AE+ I + + AI R S+ P IS + I WI S
Sbjct: 131 YTEESPLSPVTMYGKTMALAEEIIMLRYPSAAIFRISL---PMGISVNGHAGAIDWILSR 187
Query: 199 LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE 258
K + DE R P Y D KI+ L+ ++++ + ++G +S Q+ +
Sbjct: 188 FKKNNPATLYFDELRSPFYCEDFNKIVE------LTLGEKIRGIYHLGSHRHLSLYQIGQ 241
Query: 259 VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+V ++ GY+ L+K +++M KL++ L +DP
Sbjct: 242 IVNKVGGYAPHLLKGCMRKEAGPMPPRAGNVTMSNRKLIEALGVDP 287
>gi|116749692|ref|YP_846379.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
gi|116698756|gb|ABK17944.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
Length = 294
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+P +V+NCAA + E +P +A ++N P+ + ++ + LIH+STD V++
Sbjct: 52 RPRLVINCAAYTAVDRAEGEPGAAFAVNRDGPAHI----AAACGRLNSPLIHISTDYVFD 107
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G S YKE+D + PV+VYG+SK E + + N I+R++ ++G S V L +
Sbjct: 108 GRASAPYKEDDPVNPVSVYGRSKWEGEAAVRSRLQNHLIVRTAWLFGANGNSFVKTILRL 167
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGPDRV 251
++ ++ D+ CP + D+ + L+ R L + + + G V
Sbjct: 168 A------AERAELRIVSDQYGCPTWTGDLASALTGLSKRVLDGARTVPWGTYHYCGKGAV 221
Query: 252 SRVQMAEVVAE----IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTY 307
S + A + E RG + P++ + + PA +D K+ I+PV++
Sbjct: 222 SWYEFARAIVEASAFARGGKMPAVVPIATADYPLPARRPAWSVLDCGKMASEFGIEPVSW 281
Query: 308 KDGVKLTLAA 317
++G+ + + A
Sbjct: 282 REGLAVVIGA 291
>gi|402773069|ref|YP_006592606.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
gi|401775089|emb|CCJ07955.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
Length = 293
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 19/247 (7%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VK 136
D +VN AA + E++PD AM +N + +++ + L+HLSTD V++G +
Sbjct: 53 DAIVNAAAYTQVDKAESEPDVAMRVN--GAGAGFVAETAAELKVPLLHLSTDYVFDGTLD 110
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+E+DE P YG+SK+ E+ I +C N ILR++ +Y P ++
Sbjct: 111 RPYREDDEPGPTGAYGRSKLEGERQIAARCENSVILRTAWVYSP---------FGANFVK 161
Query: 197 SVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGGPDRVS 252
++LS GE ++ D+ P D+ +LA+ R + + D +++ + ++ G S
Sbjct: 162 TMLSLGETRDEIGVVADQIGNPTNALDIADALLAIAERLVDDSDPRLRGVFHMTGQGEAS 221
Query: 253 RVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
MA+ + AE +G +K +S + + PA+ +D KL + + ++D
Sbjct: 222 WADMADAIFAAAEKQGRKPVRVKRISTADYPTPARRPANSRLDNAKLDASYGVALPKWRD 281
Query: 310 GVKLTLA 316
V +A
Sbjct: 282 SVNACVA 288
>gi|386401506|ref|ZP_10086284.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
gi|385742132|gb|EIG62328.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
Length = 294
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
DVDL + + F +PDVVVN AA + E++PD A ++N + +++
Sbjct: 35 DVDLLNAVSIERAIAAF-RPDVVVNPAAYTAVDKAESEPDLAFALN--RNGAGLVAAAAA 91
Query: 118 NKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
++ +IHLSTD V++G+K+ Y E D + P +VYG+SK+A E + ILR+S
Sbjct: 92 DQGIPVIHLSTDYVFDGMKTGAYVESDPVNPQSVYGRSKLAGELAVAAANPRHVILRTSW 151
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR----W 232
+Y P + V + I + S+ +++ +D+ CP Y D+ I A+ R W
Sbjct: 152 VYAPFGGNFV------RTILRLASERDRLRVVNDQVGCPTYAPDIADAIRAIAGRVAGGW 205
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADI 289
+ + ++ GPD ++ A+ V ++ RG + L+ P+S S PA+
Sbjct: 206 ---QPRYAGVTHLAGPDPMTWYAFAKQVTDLAASRGGRSVLLDPISTSDYPTAAVRPANS 262
Query: 290 SMDITKLVQTLNI 302
+ KL ++
Sbjct: 263 QLSSAKLAAVFDV 275
>gi|385811284|ref|YP_005847680.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
gi|383803332|gb|AFH50412.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
Length = 303
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 131/288 (45%), Gaps = 30/288 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV----FFD 58
K R+L+ G G LGQ L + S+ L L A SF+ +
Sbjct: 8 KNRILIFGSNGMLGQRLSEYFSK--------------NSLELLTSSAEEKSFIENLDYVQ 53
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + F PD ++N AA + + E + ++A +NV + V +++
Sbjct: 54 CDITDRNKTKNLIYDFC-PDFIINAAAFTNVDLSETERETAWKVNVKA--VEYMAEAARI 110
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH STD +++G Y E P+ YG++K+A+E + I+R++++Y
Sbjct: 111 IDAHIIHFSTDYIFDGRNGPYLESAMPNPLGYYGRTKLASENVLKLYAVKHTIIRTNVLY 170
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GP + ++W+ L +++ D+ P Y+ D+V+ + + + +
Sbjct: 171 GPAKFG---RPDFVKWVVESLKNKKQIRIVTDQINNPTYLDDLVQAVDKII------ESK 221
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ + N+GG + +SR + +++A+ SLI PV+ + + + P
Sbjct: 222 REGIYNIGGQEFLSRFKFTQIIADYFSLDKSLIIPVTTEELKQPARRP 269
>gi|167622550|ref|YP_001672844.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
gi|167352572|gb|ABZ75185.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
Length = 311
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 150/322 (46%), Gaps = 44/322 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G +G LG+ L++ L + + A +S P + +DL
Sbjct: 6 KIMVTGASGLLGRALIKQLGQ--NSQQQIIACGYSRFGPNI-----------ERLDLTQA 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + K +PD++++CAA P V E DP +A+++N S +L+ L+
Sbjct: 53 AQVSSFVAKH-KPDIILHCAAERRPDVSEQDPQAALALN--SEATQFLTQAASQHGAWLL 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G +S Y+E+ E PVN YG+SK+ E + + FAILR I+YG +
Sbjct: 110 YISTDYVFDGSQSPYREDAETNPVNFYGQSKLKGELVVSDAQQGFAILRLPILYG--EVE 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + ++ ++ E+ + R P DV I +M L
Sbjct: 168 SLNESAVMVLLNHLVDTAEQ-SIDNWAIRSPTSTADVAAAI-----------TKMIALKQ 215
Query: 245 VGGP----------DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
G P + +++ QM V+ E+ G +T + PV++ + + P D ++
Sbjct: 216 AGEPLAGHYHFSAKETMTKYQMLLVMGELLGLATGHLIPVTSPT--DSAKRPKDSTLSCE 273
Query: 295 KLVQTLNID-PVTYKDGVKLTL 315
+LV +L I+ V ++ G K L
Sbjct: 274 RLV-SLEIESKVPFRIGFKRAL 294
>gi|255524618|ref|ZP_05391571.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|255511642|gb|EET87929.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
Length = 293
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 34/313 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ GG G LG L IE D+ L Q + DA + ++D+ +
Sbjct: 2 KLLITGGKGQLGCQLK---FIIEKNSSDIG------KLDQRIKDAECKFTDYNELDITNC 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ + F +PDV++NCAA + CEND D+A +N P +L + +E
Sbjct: 53 AEVISYVSSF-KPDVIINCAAYTNVDGCENDKDAAFKVNAIGPRNL----AIASEKYGIK 107
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H+STD V+ G + +KE D PV+VYGK+K+ E ++ E CSN+ I+R++ +YG
Sbjct: 108 LLHVSTDYVFNGEGTVPFKEYDVPNPVSVYGKTKLLGESYVREHCSNYFIVRTAWLYG-- 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA--LTNRWLSEDKQM 239
K+ + S G V+ + P Y D+ IL LTN +
Sbjct: 166 ---EYGKNFVYTIMKSAKENGH-VDVVDYQRGNPTYAEDLAHHILKIILTNEY------- 214
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + G S A + E G + P++ V+R + PA S+D L T
Sbjct: 215 -GIYHCTGTGECSWYDFACKIVEYSGIDCE-VTPITPGKVNRLAKRPAYSSLDNMMLRVT 272
Query: 300 LNIDPVTYKDGVK 312
L + +K+ +K
Sbjct: 273 LGDEMRPWKEALK 285
>gi|156050135|ref|XP_001591029.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980]
gi|154692055|gb|EDN91793.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 315
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 141/314 (44%), Gaps = 28/314 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+ L+ G TG LG+ +L+ + ++V T S P +L A DL S
Sbjct: 3 KKALITGATGLLGRQVLKVFDR---ENWNVVGTGFSRAKPPTILKA----------DLAS 49
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S V L +P VV++CAA P C+NDP+ ++N+ +S L+ + LL
Sbjct: 50 ESEVSKV-LDESKPQVVIHCAANRFPDKCDNDPEGTRALNIAASAS--LAKLCAAQSILL 106
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
I++STD V+ G + + Y+ P N+YG++K EK + YEK +LR
Sbjct: 107 IYISTDYVFPGTEGDAPYETSHSPKPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRVP 166
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
++YG + I + K V+ H R P D+ +++ + ++L
Sbjct: 167 VLYGEGEPEESAIGVLINSVWKAQEKDANVKMDHWAIRYPTNTEDIGRVLSDIAIKYLES 226
Query: 235 -EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMD 292
E + +L D+ ++ ++ ++ AEI G ++ + + VQ P D +
Sbjct: 227 KEPSSLPRILQFSSEDKYTKYEICQLFAEILGLPLDGMVANTEGNDPNASVQRPYDCHLS 286
Query: 293 ITKLVQTLNIDPVT 306
TK ++ L I+ T
Sbjct: 287 -TKALKDLEINVAT 299
>gi|325295552|ref|YP_004282066.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066000|gb|ADY74007.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 291
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+VVVNCAA ++ E D SA+ +N S V L+ L+H STD V++G
Sbjct: 59 KPNVVVNCAAYNLVDKAEEDYVSAVKVN--SVGVRNLAFACNRYRAFLVHYSTDYVFDGK 116
Query: 136 K--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
K + Y E+D+ P+N YGKSK+ E+FI E+ NF ILR S +YG + + K L +
Sbjct: 117 KENALYIEDDKPNPLNEYGKSKLIGEEFIKEEIDNFLILRVSWVYGEGRQNFIYKLL--K 174
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
W ++ + ++ +DE P R +V + L + ++ L ++ SR
Sbjct: 175 WAEN----NDYLKISYDEISVPTSTRTIVDVTLKALK------EGLEGLYHLTNSGYASR 224
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
+ A+ V +I+ + I PVS+ + + P +M K+ Q LNI+ ++++
Sbjct: 225 YEWAKKVFKIKKVN-KFIYPVSSEIFNLPAKRPKFSAMSNEKVSQELNIEIPSWEE 279
>gi|327404132|ref|YP_004344970.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823]
gi|327319640|gb|AEA44132.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823]
Length = 301
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 150/312 (48%), Gaps = 20/312 (6%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ +++ ++ +A + P+ S + ++DL +
Sbjct: 2 KILITGSNGLLGQKIVKRC--LKHHISFIATSKGVNRNPEC------PSENYIELDLVNS 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A+ +K +P +++ AAL+ CE P+ +NV +S N L + +
Sbjct: 54 EEVEAL-IKAQKPTAIIHTAALTNVDYCELHPEECYFVNVRAS--NVLFEAAKKVKAHFQ 110
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
LSTD V++G YKE+D + P+++Y +SKV AE+ + +N++I R+ I+YG T
Sbjct: 111 LLSTDFVFDGENGPYKEDDTVNPLSIYAQSKVDAEELLLNDSDTNWSIARTIIVYG--TG 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W L KGE ++ D+ R P + D+ + + R + +
Sbjct: 169 FGLSRSNMILWALEALPKGEVMKLVDDQFRAPTWADDLAYGCVEIIKR------NERGIF 222
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ GP S + E V + I+ +S++++++ + P D++K Q L+
Sbjct: 223 HLSGPVTRSVKAIVEEVGKALELENIAIETISSTTLNQAAKRPPRTGFDLSKAAQKLDYL 282
Query: 304 PVTYKDGVKLTL 315
P+ ++ + L L
Sbjct: 283 PLDIQESIPLLL 294
>gi|383934825|ref|ZP_09988264.1| spore coat polysaccharide biosynthesis protein spsK [Rheinheimera
nanhaiensis E407-8]
gi|383703956|dbj|GAB58355.1| spore coat polysaccharide biosynthesis protein spsK [Rheinheimera
nanhaiensis E407-8]
Length = 291
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV+NCAA + + + + + IN ++ V L+ + LL+ STD V+ G
Sbjct: 51 QPDVVINCAAYTKVALAQQQAELCLQIN--TNAVVHLAQLCAKAQCLLVQFSTDYVFNGE 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y E D AP+NVYG+SK+ AE+ I + C + I R+S ++ + L
Sbjct: 109 KGSAYIETDSTAPLNVYGQSKLLAEQAIQQHCQRYLIFRTSWLFSQYGHNFYRTML---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK-QMQL-LLNVGGPDRVS 252
++ KG + DE CP Y DV +L + ++ DK Q + ++ VS
Sbjct: 165 --TLAEKGTAISVVDDETGCPTYAGDVADAVLKVLAQYNQSDKAQFSYGIYHLASTPAVS 222
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
Q A + T ++ VS+ GV+ PA +++ T I +++ +
Sbjct: 223 WYQFASAIFAAHQL-TPVLTAVSSKHWAGGVKRPAYSALNSRAFSTTFGISLPSWQQAL 280
>gi|442610607|ref|ZP_21025318.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747824|emb|CCQ11380.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 295
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 26/293 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G TG LG+ L ++ G + + +S L + +DL
Sbjct: 3 ILITGATGLLGRCLYSTMNTKLGTEHKIIGVGYSRAKAPL-----------YSLDLGKED 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + QPDVV++ AA P VCE DP++ ++NV ++ + L+ L
Sbjct: 52 ALKAF-FETHQPDVVIHAAAERKPDVCEQDPEATRALNVDTT--DRLARLASQHNAKLFF 108
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G + Y E DE + VN YG+SK AE + N A++R ++YG +
Sbjct: 109 ISTDYVFDGKHAPYTENDEHSAVNFYGRSKSMAEAKVLASDKNHAVVRVPVLYG--DVET 166
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S VLS + HD R P +V D I L L + KQ +
Sbjct: 167 LSESAVTIIAKHVLSDNQSA---HDNWAIRYPTHVED---IALTLIDLIKLPAKQACGVF 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+V +++ +A+ +AEI G + + + S D P + ++ T+L
Sbjct: 221 HVSDNQAMTKFDIAQTIAEILGLPANQLTSLDEPSQD--AARPYNCALKDTRL 271
>gi|257387274|ref|YP_003177047.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM
12286]
gi|257169581|gb|ACV47340.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM
12286]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 133/319 (41%), Gaps = 42/319 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
R+LVVG G LG +++ + + +DV T+HST PL Q
Sbjct: 2 RLLVVGANGLLGSNVVLAGQQ---RGWDVCGTYHSTQPAFDIPLTQF------------- 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSA--MSINVPSSLVNWLSSFT 116
DL FD L PDVV+NCAA++ CE +P+ A ++ N P L T
Sbjct: 46 -DLGEHDTFDET-LAEHDPDVVINCAAMTDVDGCETNPEQAYVLNGNAPGELA------T 97
Query: 117 ENKENL--LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ N IH+STD V++G ++ Y E + P VYG+SK+ E+ ++ + I R
Sbjct: 98 DCDANGVDFIHVSTDYVFDGTQRTPYSESADPDPAQVYGQSKLVGEQAVHGEVPETLIAR 157
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
S ++G P WI + E V F D+ P + +L L
Sbjct: 158 LSFVWGIHRSRGDLTGFPA-WIRNRHQSDETVPLFTDQWVTPTRAGQAAETLLDLIG--- 213
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+ L +V VS + E++AE L+ S V+R P +++
Sbjct: 214 ---QDATGLFHVACSSCVSPYEFGEMIAEYVNAGEDLLSEGSIEDVERDATRPTYSCLNV 270
Query: 294 TKLVQTLNIDPVTYKDGVK 312
+ TL T ++ V+
Sbjct: 271 EHVESTLGRSQPTIREDVE 289
>gi|373457587|ref|ZP_09549354.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
gi|371719251|gb|EHO41022.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
Length = 297
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 29/299 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV----AATHHSTPLPQLLLDALPHSFVF 56
M KRVL+ G GY+ Q LLQ +P +V AA L +DAL
Sbjct: 1 MCVKRVLITGINGYISQFLLQT------RPENVEIIGAARRDDLSAHALNIDAL------ 48
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+DL AL G D V++ AA+S +C+ +P+ A+ +N ++ L+ +
Sbjct: 49 IKLDLSQAVQPQLNALS-GPVDAVIHTAAVSSLALCQKEPELALRVNAQAT--RELAHWC 105
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ LI+LSTD V++G Y E + P+N YG SK E + E NFAI R ++
Sbjct: 106 KTNGARLIYLSTDIVFKGDHPPYDENSKPEPINHYGLSKWQGEIAVQETMDNFAIGRIAL 165
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
P ++ I W L+ E + F DE R P Y ++ + W
Sbjct: 166 ALAPGLNG--TRNF-IDWFLERLNNNETIPLFKDEIRTPTYTVELARRF------WQLAL 216
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ + ++ G + + R + + + + GY L++ +S + + P D+S+ T+
Sbjct: 217 SRATGIYHICGAEALDRFTLGQKLCDALGYGHKLLEAISLNDMT-DYPRPVDVSLVCTQ 274
>gi|326434355|gb|EGD79925.1| hypothetical protein PTSG_10207 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKSG 64
VL+ G GY+ H++ L + + + P PQ +L PH V + ++LK
Sbjct: 50 VLITGANGYVASHVITVLDN-QWRHGKLRLWASGLP-PQTVLTN-PHLDVLRERLELKDD 106
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN--- 121
G F PD++++ AA+S +C ++PD A +IN + L+ T +K
Sbjct: 107 KGIQDGVRAF-DPDLILHFAAMSSTSLCASNPDLAWNINAEGTRRLALALTTTHKSTTAH 165
Query: 122 -----------LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L + +STD VY+G + +E VYG++K AAE+ A
Sbjct: 166 QQQQQQQQQHPLFVLISTDWVYDGTAANVREHAPAPGFGVYGQTKAAAEEATSSVLGEHA 225
Query: 171 -ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
ILRS++++GP ++ + + W+ L E++ + DE R PVYV D+ +++L
Sbjct: 226 LILRSALVFGPPSLVDARRRSTLGWMADALRNYERITAYEDEYRTPVYVGDIARLML 282
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 20/105 (19%)
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV-------------- 279
+ + L+ N+GG DRVSR + A+VVA + G LI P S +++
Sbjct: 358 TRSGRRALVFNMGGADRVSRFEFAKVVAHVLGRGDYLITPASLAAMQQQQQQQQQQQQQQ 417
Query: 280 ------DRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAE 318
R Q P D+SMD + L + P K V +LA E
Sbjct: 418 QQQQQQQRQQQRPPDVSMDSSALWSAIGFAPTPLKQAVIQSLAQE 462
>gi|336437119|ref|ZP_08616828.1| hypothetical protein HMPREF0988_02413 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006253|gb|EGN36289.1| hypothetical protein HMPREF0988_02413 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 312
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+D+ S L+ +P+ ++NCA L+ +CE + + A +N + LS+
Sbjct: 63 DLDITSAEEVTLFGLR-NRPNTIINCAGLTDTELCERNVEEAYKVNALGA--RNLSAVAR 119
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +I LSTD V+ + + E D PV VYGKSK+A E F+ E I+RSS
Sbjct: 120 KLDARIIQLSTDDVFSSSEDRKFHEFDTPKPVTVYGKSKLAGENFVKELAPKHLIIRSSW 179
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+YG + V I KGE+++ DE P ++ K+I+ L +
Sbjct: 180 VYGKGGANFV------NMIIEKAKKGEQIQVPDDEFALPTSAAELSKVIIRLIQK----- 228
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+Q + V G R SR ++A+ + + G SL+ P + +D +Q P +D L
Sbjct: 229 EQEGIYHAVCGGVRCSRYELAKEIVRLLGKDESLLIPAALRELDSKLQGPDYTVLDNMML 288
Query: 297 VQTLNIDPVTYKDGV 311
+P +K+ +
Sbjct: 289 RMCEIEEPKDWKEAL 303
>gi|114045934|ref|YP_736484.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7]
gi|113887376|gb|ABI41427.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7]
Length = 306
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 23/315 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S +A H DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSRA------EAGIHRL-----DLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ + + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEVAKTHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ E PVN YG SK+ E + + FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAEPNPVNFYGASKLQGETCVLSTDNGFAVLRLPILYGE--VTQ 164
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ +S + I+ +L G H R P D+ I L R L + + +
Sbjct: 165 LNESAVLVLINQLL-DGRPQRVDHWAIRAPTSTADIANAIAKLIQRQL-HAADVSGIYHF 222
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
+++ QM + E+ G ++ + P + + P D ++ +L +
Sbjct: 223 SATQTMTKYQMLLSLGELLGIDSAHLLPDQTPT--DSAKRPQDCTLSCGRLAALGIYSEL 280
Query: 306 TYKDGVKLTLAAEAT 320
+K G+ L+ +T
Sbjct: 281 AFKTGLTQALSQSST 295
>gi|402082163|gb|EJT77308.1| methionine adenosyltransferase 2 subunit beta [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 320
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 32/318 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS KRVL+ G TG LG+ +++ + +G AA + VD
Sbjct: 1 MSDKRVLITGATGLLGREVVRAFQDKKGWAVTGAAFSRA------------DGVSILKVD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + AL +P VVV+CAA P + DP+ +NV ++ L+
Sbjct: 49 LGNVVEIEK-ALDKIRPQVVVHCAANRFPDKVDKDPEGTRRLNVAAT--GTLARLCAATG 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-------KCSNFAI 171
+LI++STD V+ G ++ Y + E P N+YG++K+ E+ + E + +
Sbjct: 106 AVLIYISTDYVFSGRPGEAPYAADAETGPTNLYGQTKLDGERAVLEAYGGGGKGKARGVV 165
Query: 172 LRSSIIYGPQTI---SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
LR ++YG S V + + W + + + V+ H R P DV ++ +
Sbjct: 166 LRVPVLYGHAETPAESAVNVLMDVLW-QAQGDEAKAVKMDHWALRYPTNTEDVGRVCADV 224
Query: 229 TNRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVS-ASSVDRGVQS 285
++L D L LL D++++ ++ ++ EI G S+ I+P + + VQ
Sbjct: 225 AEKYLDTDDSATLPKLLQFSSEDKLTKYEICQLFGEIMGLSSDKIEPTTEGNDPSATVQR 284
Query: 286 PADISMDITKLVQTLNID 303
P D + T+ ++ L ID
Sbjct: 285 PYDCHLG-TRELRDLGID 301
>gi|406880071|gb|EKD28510.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 291
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 145/308 (47%), Gaps = 30/308 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V+G +G++G ++ + L + K +H++ L +L ++ + +L+
Sbjct: 2 IIVIGASGFIGSYIYENLKSKKYKLTGTYNSHYTNGLVKLNIE---------NDNLRD-- 50
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL-I 124
LK + V CA+ S EN+ ++ ++NV S L F E +N+ +
Sbjct: 51 -----VLKNYNIKIAVICASESSISKIENEKNNFHNVNVNSQ-KQLLEYFKE--KNIKPV 102
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+S+D +Y+G + Y E+D+ P+N+YGK K+ E FI +NF I+R S +Y ++ +
Sbjct: 103 FISSDNIYDGNEGDYCEDDKRNPLNIYGKQKLEIENFIVSHFNNFLIVRLSKVYSSKSEN 162
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K+ WI+S+ S G + D P +V D+ II L + D+ + N
Sbjct: 163 ---KNFITDWINSLYS-GNTLNLATDRVISPTHVIDIANIIEIL----IKNDESG--IYN 212
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ D +S + + + G+ T +K V+ S+ G P + S++ K +
Sbjct: 213 ISSSDNMSYFDIGKKIISYFGFPTEQLKKVTLLSIKHGELIPKNTSLNSFKFKNKFQYNF 272
Query: 305 VTYKDGVK 312
++ + +K
Sbjct: 273 ISIDETIK 280
>gi|240948931|ref|ZP_04753287.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305]
gi|240296746|gb|EER47357.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305]
Length = 292
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 15/261 (5%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
++D+ S + F +PDV++N AA + E++ + + +INV +L+
Sbjct: 34 ELDITDQSAVKKIVKTF-KPDVIINAAAHTAVDRAESEVELSEAINVKGP--QYLAEAAN 90
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+++H+STD V+EG S YKE+D+ P VYG++K+A E + + S ILR++
Sbjct: 91 EIGAMILHISTDYVFEGTGSGEYKEDDQTNPQGVYGRTKLAGEIAVQQANSRSIILRTAW 150
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
++G + V L + + + D+ P Y D+ K ++ + N+ L+
Sbjct: 151 VFGEHGHNFVKTML------RLAKDRDSLGIVGDQFGGPTYAGDIAKTLIEIANQILAGK 204
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVV---AEIRGY--STSLIKPVSASSVDRGVQSPADISM 291
+ + + G VS + A+ + AE++ + L+ ++ S + PA+ +
Sbjct: 205 EDAFGVYHFTGKPYVSWYEFAKAIFAEAELQNILEKSPLVNSIATSDYPTPAKRPANSRL 264
Query: 292 DITKLVQTLNIDPVTYKDGVK 312
D+TK+ Q NI+P ++ +K
Sbjct: 265 DLTKIKQVFNIEPSNWQKALK 285
>gi|386812185|ref|ZP_10099410.1| dTDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
gi|386404455|dbj|GAB62291.1| dTDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
Length = 285
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 33/295 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+G G LG++L+ LS + HS + +++ + H VD+
Sbjct: 2 KILVIGSDGMLGRYLVNYLSNLS----------HSKSISEVI--GVNHK----QVDITHH 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +P+ ++NCAA + CE A ++N + L++ ++ E +I
Sbjct: 46 SDTSRLIAHI-RPNTIINCAAFTNVDACETQIPVAFAVNAAGAKNIALAA--KHAEAKVI 102
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+STD V++G K+ Y E D+ P++VYGKSK+A E I E N+ I+R++ ++GP
Sbjct: 103 QISTDYVFDGTKNEPYIETDQTNPISVYGKSKLAGELAIQEILDNYIIIRTAWLFGPWRR 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + K V D+ P Y ++ I + +S D ++ L
Sbjct: 163 NFVTTMLDLG------KKNRSVSVVTDQYGSPTYTANLSHAIGTM----ISLD--LRGLY 210
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
++ SR + A+ + E+ S S++ PV + R P + S++ TK Q
Sbjct: 211 HITNSGTCSRYEWAKKIFELTDSSVSVL-PVKTADYKRAAMVPQNSSLNCTKYTQ 264
>gi|346325337|gb|EGX94934.1| NAD dependent epimerase/dehydratase family protein [Cordyceps
militaris CM01]
Length = 315
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 31/315 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + V+V G TG LG+ + + K ++V T S VD
Sbjct: 1 MVDRTVVVTGATGLLGRQVSRAFRR---KGWNVKGTGLSRA----------DGVDVLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S D + L+ P+V+V+CAA P E DP+ A +NV S + L+ K
Sbjct: 48 LGNASEIDKL-LEETNPEVIVHCAAERFPDKVEKDPEGARKLNV--SATSSLAQAAAAKG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIY----EKCSNFAILRS 174
LI++STD V+ G ++ Y+ + E +P N+YG++K+ EK K + +LR
Sbjct: 105 AFLIYISTDYVFPGRLGEAPYEADSETSPPNLYGQTKLDGEKAALMADGGKPGSAVVLRV 164
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNR 231
++YG +P ++ + +DSV S+ E F D R P D ++ +
Sbjct: 165 PVLYG-SAETPAESAVNVL-LDSVWKSQTEDKRFKMDHWAPRYPTNTEDAARVCHDIAEH 222
Query: 232 WLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPAD 288
+L + L +L DR+++ +M + AEI G I+P + + VQ P D
Sbjct: 223 YLGAADRASLPKILQFSSEDRMTKYEMCQKFAEIMGLPADNIEPNTEGNDPNAAVQRPYD 282
Query: 289 ISMDITKLVQTLNID 303
+ TK +++L+ID
Sbjct: 283 THLS-TKTLKSLDID 296
>gi|294055959|ref|YP_003549617.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM
45221]
gi|293615292|gb|ADE55447.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM
45221]
Length = 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 146/308 (47%), Gaps = 26/308 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD--VDLK 62
++LV G TG LG L + + +++ A HS + H V + +D
Sbjct: 2 KILVTGATGLLGNAYLDAATR---RSHELIALSHS--------QVVQHPAVVRNEQIDGT 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A+ L+ PDV+VNCAA+S P + +P A INV +L L+ + +
Sbjct: 51 DLDSLTALCLEI-WPDVIVNCAAISNPASVDANPQLAEKINV--ALPRHLAQISTHLGAR 107
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGP 180
L+H+STD V++G + Y+ D P ++YG++K+ AE+ + E S + +LR I+ G
Sbjct: 108 LLHISTDMVFDGHSAEAYRSTDMPCPTSLYGQTKLMAEREVLEHNSEDPVVLRIPILMGN 167
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
SP + + + + KGE+ + F DE R P +V +++ LSE + +
Sbjct: 168 ---SPSGARSLHEKLFAAIRKGERPKLFCDEIRQPCSAGNVADVLVE-----LSERRDLH 219
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ + G + +SR ++ + + + +++ V P++++ ++ +V L
Sbjct: 220 GIFHWAGNEALSRFEIGQRILKHFDLPLDMVESVVKGDNPDFANRPSNLTFNLDPIVGKL 279
Query: 301 NIDPVTYK 308
P+ ++
Sbjct: 280 KTRPIDFE 287
>gi|347523230|ref|YP_004780800.1| dTDP-4-dehydrorhamnose reductase [Pyrolobus fumarii 1A]
gi|343460112|gb|AEM38548.1| dTDP-4-dehydrorhamnose reductase [Pyrolobus fumarii 1A]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 21/287 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
+ G +G LG H L GL +E K +D+ A + S P A + +DL
Sbjct: 1 MTGSSGLLG-HKLVGL--LEHKGFDIIALYRSKP------PATCSECIKLQLDLTEPERL 51
Query: 68 DAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS 127
V + +PDVV + AA + CE + + A +N S++ +S ++++S
Sbjct: 52 VDVVQEH-KPDVVFHLAAFTNVDACEKEREMAWRVNTLSTIALVRASVRVGAR--IVYIS 108
Query: 128 TDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
TD V++G + Y+E+D +P+N YG +K+A E + +N ++R+S IYG P
Sbjct: 109 TDYVFDGRRGQYREDDAPSPINYYGLTKLAGETPVL--AANGVVVRTSGIYGS---GPGK 163
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
K+ PI I+ L +GE++ D+ P + + +L L + L E + +L G
Sbjct: 164 KTFPIVVIEK-LGRGEEIHAAIDQWYSPTLNTLLARALLTLLEK-LDEAVEHGVLHIAG- 220
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
RVSR + A ++AE G L+KPV + P D S+D+T
Sbjct: 221 -SRVSRYEFALMIAEKFGLPKDLVKPVKLEELQFIAPRPRDSSLDVT 266
>gi|320104167|ref|YP_004179758.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319751449|gb|ADV63209.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 300
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 24/297 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G+ G L+ L E + ++V A T + D S V +DL
Sbjct: 2 RILLTGAAGWFGAFALESLIE---RGHEVVAWSGRTQGERRFQD---RSIVLEPIDLGHP 55
Query: 65 SGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + Q P+ +++ AA++ DPD A +NV ++ L + +
Sbjct: 56 DQ-ERLVRRLDQVDPEAILHAAAIASADAAFRDPDQAQRVNVQAT--ETLGLWCALRRRR 112
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI STD V+ G +E D P YG++K+ AE+ + + +R S++YG
Sbjct: 113 LIFTSTDLVFGGSGPPRRETDPAQPSLTYGRTKLEAERRLAQVNPEALSVRLSLMYG--- 169
Query: 183 ISPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S + + D VL+ +G F DE R P + V ++++ WL
Sbjct: 170 ---LTRSDRLSFFDQVLADLAQGRPRALFIDEYRTPAHAPTVARLLVE----WLESPTFP 222
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
L++VGGPDR+SR + A G L++P PAD+++D T+L
Sbjct: 223 SGLVHVGGPDRLSRFDLVRQAAACLGLDPQLVQPSRMIDTRFNEPRPADVALDTTRL 279
>gi|206900982|ref|YP_002250211.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12]
gi|206740085|gb|ACI19143.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12]
Length = 281
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 149/310 (48%), Gaps = 49/310 (15%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KKR+L+ G G+LGQ+ ++ + E P TH D++L+
Sbjct: 2 KKRILITGAKGFLGQYFVKEFEDEEVIP----ITHQ-------------------DINLE 38
Query: 63 SGSGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKE 120
+ + + +LK PD+V++ AA+ P +CE DP+ A +N V + V S +
Sbjct: 39 DKNAIEKITSLK---PDLVIHPAAIRSPDICEEDPEKAWKVNAVGTKHVAIACSLLDIP- 94
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++STD V+ G K Y E P+N+YGK+K+ E F E C I+R+S ++G
Sbjct: 95 --LIYISTDYVFSGGKDTPYTEFYPPNPINLYGKTKLYGEIFTKEFCKKHFIIRTSYVFG 152
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII--LALTNRWLSEDK 237
+ + + I + L +G++++ + Y +D+V+ + L+ TN + +
Sbjct: 153 EYGNNALTQ------IYNSLKEGKEIKLSNYHFASCTYAKDLVRKVKELSFTNLYGTYH- 205
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
++N G ++R A VAEI G+S + P+++ + + P S+ ++
Sbjct: 206 ----IVNKG---IITRYDFACKVAEIAGFSKEKVIPLNSETFKAPAKRPL-YSVLRNYML 257
Query: 298 QTLNIDPVTY 307
+ N+D + Y
Sbjct: 258 EIYNMDDLPY 267
>gi|434394824|ref|YP_007129771.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 7428]
gi|428266665|gb|AFZ32611.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 7428]
Length = 301
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 38/230 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G TG LGQ L + L++I DV A T +DL
Sbjct: 2 RPSILLIGNTGQLGQQLQRYLAQI----VDVTAVGRPT------------------IDLT 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ K QP +++N AA + E +P+ A +IN + + L++ + +
Sbjct: 40 QPDSLRQIIRKV-QPQIIINAAAYTAVDKAETEPEVASAINAIAPGI--LAAEAQQLHSH 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G +S Y+E D P+ VYG+SK+A E+ I + C + ILR++ +YG
Sbjct: 97 LIHISTDYVFDGCQSHPYQETDATNPLGVYGRSKLAGEQAIQDNCDRYIILRTAWVYG-- 154
Query: 182 TISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
S ++ ++L G E++ D+ P + D+ + I L
Sbjct: 155 -------SHGNNFVKTMLRLGADREEIRVVADQIGSPTWTGDITRAIAQL 197
>gi|323446280|gb|EGB02502.1| hypothetical protein AURANDRAFT_72848 [Aureococcus anophagefferens]
Length = 870
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 76/343 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVLVVG +GY+ QHL+ LS + V TH P + S +D +S
Sbjct: 99 KRVLVVG-SGYVAQHLVASLSAT--GEFAVCYTHRRAAAPFAAPPGV-DSCALDLLDAES 154
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
A AL +PDVVVNCAAL+ P CE D A + N P + L + + LL
Sbjct: 155 C----AAALWAQRPDVVVNCAALASPAACEADEARAAATNCPLGFLECLHACCPDA--LL 208
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPV---------------------NVYGKSKVAAEKFI 162
+H STD V GV +D+ AP YG++K+A E +
Sbjct: 209 VHCSTDLVLAGV------DDDGAPAYGDGGASAPRAAALAAAARPATAYGRTKLAFEAAL 262
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLP---IQWIDSVLSKGEKVEFFHDECRCPVYVR 219
+ R S + G +P P + QW+ L +GE V + DE R V VR
Sbjct: 263 AAGWQRAVVFRLSNVVG----APAPFTGDGKFAQWVAGELRRGEPVTLWSDEARNFVDVR 318
Query: 220 DVVKIILAL----------------------------TNRWLSEDKQMQ----LLLNVGG 247
V + A T R+ ++ + + L +N GG
Sbjct: 319 QVCDGVAAAARLYGVSRQPCDASDARALAAAAHSPAETARFHAKARALHPAVFLHVNCGG 378
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
PD +SR + VA G L++ +++P D S
Sbjct: 379 PDCLSRYALGRAVANTLGLDAGLVRAAPRPPSAAPLRAPLDSS 421
>gi|113971860|ref|YP_735653.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4]
gi|113886544|gb|ABI40596.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4]
Length = 306
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 22/227 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S +A H +DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSRA------EAGIHR-----LDLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ +N + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEAAKNHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ E PVN YG SK+ E + FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAEPNPVNFYGASKLQGETCVLNTDRGFAVLRLPILYG--EVTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ +S + I+ +L S+ ++V+ H R P D+ I L R
Sbjct: 165 LSESAVLVLINQLLDSRPQRVD--HWAIRAPTSTADIANAIAKLIQR 209
>gi|67902090|ref|XP_681301.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4]
gi|40740464|gb|EAA59654.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4]
gi|259480783|tpe|CBF73741.1| TPA: NAD dependent epimerase/dehydratase family protein
(AFU_orthologue; AFUA_5G02240) [Aspergillus nidulans
FGSC A4]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 39/314 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV----DL 61
VLV G TG LG+ + +D + Q A P + + D+ D+
Sbjct: 5 VLVTGATGLLGRQV-----------FDKFKRSGCLTVGQGFSRANPPTILKSDLEKPDDI 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K L +P +V++CAA P +C+ DP+ A +NV ++ L+ T +
Sbjct: 54 KG-------LLDEAKPQIVIHCAANRSPDLCDKDPERARRVNVDATRT--LAELTAERNI 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE---KCSNFAILRSSI 176
LL+++STD V+ GV ++ Y+ + P N+YG+ K E+ + E K ILR +
Sbjct: 105 LLVYISTDYVFPGVEGEAPYEADAPTKPPNLYGELKRDGEQVVLEATKKSGMGIILRVPV 164
Query: 177 IYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWL 233
+YG T + +S +DSV ++ E D+ R P DV +++ + ++L
Sbjct: 165 LYG--TANENSESAVNTLVDSVWKAQDENAGIKMDDWAQRYPTNTEDVARVLRDIVIKYL 222
Query: 234 SEDKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADI 289
E Q+ L L D++++ +M E AEI G S +++ + + VQ P D
Sbjct: 223 KERGQIMKLPKILQFSSEDKMTKYEMCEKFAEILGVSLKGMVRNKEGNDPNASVQRPYDT 282
Query: 290 SMDITKLVQTLNID 303
+ TK+++ L ID
Sbjct: 283 HLS-TKVLKDLGID 295
>gi|444911864|ref|ZP_21232035.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
gi|444717640|gb|ELW58466.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 35/305 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+LV G +G LG H+L L G +DV H + L +D +
Sbjct: 3 RRILVTGASGMLGSHVLAVL----GAKHDVLGWSHGSDRAAL-----------HRIDATN 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + + P++ V+C A CE DPD A +N S+ ++ L
Sbjct: 48 ASQVEQF-FRTHTPEICVHCIASPDVLACERDPDMADRLNAQST--EQVARACAEHGAKL 104
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++S++ V++G S Y E+ + P+ +YG +K+ E+ + + +R ++YG
Sbjct: 105 VYISSEYVFDGTSSHGYTEDSQPRPLQIYGTTKLRGEEHT-ARVPHHLTVRLPVLYG--- 160
Query: 183 ISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PVP P WI+++L +G+ VE R P + DV ++ + D+++
Sbjct: 161 -GPVPGRKPT-WIEAMLRSLEQGKSVELDDHFERQPTWSYDVASVLAR------ALDEEL 212
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ +L+V + +++ +AE G +SL++PV A G + PA + +L Q
Sbjct: 213 EGILHVATQEGLTKYAWGVKLAEAAGLPSSLLRPVPAPPETSGPRKPARPWLHTHRL-QR 271
Query: 300 LNIDP 304
L I P
Sbjct: 272 LGISP 276
>gi|380478611|emb|CCF43499.1| RmlD substrate binding domain-containing protein [Colletotrichum
higginsianum]
Length = 317
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 33/320 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ K V+V G TG LG+ + + E + ++V T S F VD
Sbjct: 1 MAGKNVVVTGATGLLGRQVARAF---ELRSWNVKGTGFSRA----------DGVSVFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S + L +P VVV+CAA P ++DPD+A ++NV ++ L++ +
Sbjct: 48 LGNTSEVEKF-LDESKPQVVVHCAAQRFPDKVDSDPDAARALNVAATKS--LANLCAARS 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E+ +L
Sbjct: 105 TLLIYISTDYVFSGKPGEAPYEADAPTGPTNLYGQTKLDGELAVLEEYKAAGLEGLGLVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG + +P + I +D++ + KV+ H R P DV ++ +
Sbjct: 165 RVPVLYG-KAHTPAESATNIL-MDTLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDIA 222
Query: 230 NRWL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST-SLIKPVSASSVDRGVQSP 286
++L S+ M +L D++++ ++ + A+I G +I + + VQ P
Sbjct: 223 GKYLEASDRSSMPKVLQFSSEDKMTKYEICQTFADIMGLPMDGIIANTEGNDPNASVQRP 282
Query: 287 ADISMDITKLVQTLNIDPVT 306
D + T+ ++ L ID T
Sbjct: 283 YDCHLS-TRALKDLGIDVST 301
>gi|157960380|ref|YP_001500414.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
gi|157845380|gb|ABV85879.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
Length = 307
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 28/314 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-DL-K 62
+++V G TG LG+ +++ L + Q++ + + +V DL +
Sbjct: 6 KIMVTGATGLLGRAVVKQLKQCSDF--------------QVIECGFSRASIGIEVLDLTQ 51
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S F+ VA +PD +V+CAA P V E P +A+++N +S + L+
Sbjct: 52 SEQVFEFVAKH--KPDAIVHCAAERRPDVSEQAPQAALALNAEAS--DSLAKAASQNGAW 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+++STD V++G Y+E + PVN YG+SK+ E + + +FAILR I+YG
Sbjct: 108 LLYISTDYVFDGTAPKYEESSQTNPVNFYGQSKLQGENLVADSEPSFAILRLPILYG--D 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + + +L+ VE+ D R P D+ I + L+ KQ+
Sbjct: 166 VESLNESAVMVLLKHLLAP--HVEYLDDWAVRSPTSTADIAVAIHEMLVLQLA-GKQLSG 222
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ + +S+ QM V+AEI G T + ++ +S + P D S+ +L
Sbjct: 223 RYHFSAEETMSKYQMLLVMAEILGLDTGHL--IAVTSPTDSAKRPKDCSLSCERLASLGI 280
Query: 302 IDPVTYKDGVKLTL 315
+ +K G++ L
Sbjct: 281 KSRLPFKVGIESAL 294
>gi|313117361|ref|YP_004044344.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|448287733|ref|ZP_21478938.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|312294252|gb|ADQ68683.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|445570866|gb|ELY25424.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
Length = 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 22/297 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G LG +++ + + + + T+HS + D H +D+ +
Sbjct: 2 QLLILGANGLLGSNVV---TAAQDRGWRTTGTYHS---ERPTFDIPLHQ-----IDITNT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PD VVNCAA++ CE + + A +N + ++S +
Sbjct: 51 DAVQRV-LSEVEPDWVVNCAAMTDVDGCEENTEHAHEVNARAP--GEIASQCVESSIRFL 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G V Y+E+D P+ YGKSK A E + E+ + I R S +YG
Sbjct: 108 HVSTDYVFDGTVNGVYEEDDAPQPIQEYGKSKFAGENEVVERDPDALITRLSFVYGMHRG 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S P W+ L GE+ F D+ P + I L D L
Sbjct: 168 SDQLTGFPA-WVRGRLLDGEQTPLFTDQHVTPTRAGQAAETICDLI------DADESGLF 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+V + + +A G +L+ S S V+R + P+ ++++K+ +TL
Sbjct: 221 HVAAQSCTTPYEFGAAIAGQLGMDETLLTQGSQSDVNRPAERPSRTCLNVSKVEETL 277
>gi|311745813|ref|ZP_07719598.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1]
gi|126576015|gb|EAZ80293.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1]
Length = 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 21/314 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS-FVFFDV 59
++KK++ + G G LGQ L+ L +E ++V LP F + +
Sbjct: 8 VNKKKLFITGVNGLLGQKLVAQL--LEKDEFEVIGCGKGES-------RLPFGGFKYVSL 58
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ + V + +PD++++ AA++ CE + ++A NV ++ ++L +E
Sbjct: 59 DITDEAKVQEVLSEI-KPDILIHGAAMTNVDECELNQEAAYDANVNAT--SYLLQASEKL 115
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I +STD ++ G + EE PVN YG++K+ AE+ + +AI R+ +++G
Sbjct: 116 NTHFIFVSTDFIFSGEEGPLDEEAIAKPVNYYGETKLKAEQLVMNSTFKWAIARTVLVFG 175
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ S L G+ ++ D+ R P D+ + L ++
Sbjct: 176 --IAHDMSRSNIILWVKSSLESGKNIQVVDDQYRTPTLAEDLAAGCI------LIAEQGA 227
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ + N+ G D ++ +MA + A+ SLI V + + + P I K +
Sbjct: 228 EGVYNISGSDFMTPYEMAIMTADYFDLDKSLIAKVDSKIFTQPAKRPLKTGFIIEKARKE 287
Query: 300 LNIDPVTYKDGVKL 313
L P T++ + +
Sbjct: 288 LGYQPKTFRTAIGI 301
>gi|117922141|ref|YP_871333.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3]
gi|117614473|gb|ABK49927.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3]
Length = 309
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 25/312 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S + L +DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSRAEAGIHL-----------LDLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ + + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEVAKTHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ PVN YG+SK+ E + S FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAVPNPVNFYGESKLQGETCVLNTDSGFAVLRLPILYGE--VTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + I +L S+ ++V+ H R P D+ I L R L + + +
Sbjct: 165 LSESAVLVLIKLLLDSRPQRVD--HWAIRAPTSTADIANAIAKLIQRQL-HAADVSGIYH 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+++ QM + E+ G T+ + P + +D + P D ++ +L
Sbjct: 222 FSATQTMTKYQMLISLGELLGIDTAHLLP-EQTPMD-SAKRPQDCTLSCGRLAALGIHSE 279
Query: 305 VTYKDGVKLTLA 316
+ +K G+ L+
Sbjct: 280 LDFKAGLSRALS 291
>gi|397689379|ref|YP_006526633.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
gi|395810871|gb|AFN73620.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
Length = 287
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 116/246 (47%), Gaps = 12/246 (4%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VD+ + + L F PD V+N AA + E + + A +NV V L+ ++
Sbjct: 38 VDITDKNSVKKIILDFF-PDFVINAAAYTNVDKAETEREEAWKLNVTG--VENLAFYSWT 94
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ LIH+STD +++G Y E D P++ YG++K+AAE I + ILR++++Y
Sbjct: 95 IDAHLIHISTDYIFDGKNGPYIETDRPCPISYYGRTKLAAENSIRANGVRYTILRTNVLY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GP + K ++W+ + L + + + D+ P + D+ I A T + E
Sbjct: 155 GP---AKGGKPDFVKWVINSLKENKVINIVTDQFNNPTFTDDLANAI-AKTIEFRKEG-- 208
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ N+GG + +SR + + +A+ LI+P+ +++ P + I K
Sbjct: 209 ---IYNIGGKEILSRYEFTQRIADYFKLDKKLIRPILTKDLNQPAPRPLKSGLIILKAST 265
Query: 299 TLNIDP 304
L P
Sbjct: 266 ELGYQP 271
>gi|358388586|gb|EHK26179.1| hypothetical protein TRIVIDRAFT_35388 [Trichoderma virens Gv29-8]
Length = 318
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 151/315 (47%), Gaps = 28/315 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VL+ G TG LG+ ++ G + V + +S +D
Sbjct: 1 MAQRTVLITGATGLLGRAVVAAFHTRSG--WTVKGSGYSRA----------DGVDILKLD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+S + A L +P VVV+CAA P + DP++A ++N+ +S L+S T ++
Sbjct: 49 LESEADI-AKTLDEIRPQVVVHCAAQRFPDKVDKDPEAARALNIAASKS--LASATAARD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ G + Y+ + P N+YG++K+ EK + E+ + L
Sbjct: 106 IFMIYISTDYVFPGRPGDAPYEADATPGPTNLYGQTKLDGEKAVLEEYAAAGKEGLGVAL 165
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G K++ H R P DV ++ + +
Sbjct: 166 RVPVLYGHAETPSESAVNVLMDSVWKAQTEGTKIKMDHWAIRYPTNTGDVGRVCHDVATK 225
Query: 232 WL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPAD 288
+L ++ K + L DR+++ ++ + +I G S + I+P + + VQ P D
Sbjct: 226 YLDSADRKHLPRTLQFSSEDRMTKYEICQHFGDIMGLSIANIEPNTEGNDPNASVQRPYD 285
Query: 289 ISMDITKLVQTLNID 303
+ T+ ++ L ID
Sbjct: 286 CHLS-TQELKNLEID 299
>gi|256376132|ref|YP_003099792.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
gi|255920435|gb|ACU35946.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
Length = 302
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 27/272 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV+G +GYLG + + D P A + ++D++ G
Sbjct: 10 RVLVIG-SGYLGGAVA---GRLRAGGVDAVVCSRRRPGA-----ASAGGAPWRELDVRDG 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + P+ VV S CE +P+ A + + ++ E + +LI
Sbjct: 61 RACRELVAEL-APEGVVVVHGPSDITWCEANPELAREAHAGGARN--IADAVEGRHVVLI 117
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--PQT 182
STD V++G ++ E D ++P N YG +K+AAE+ E+ S A LR S+++G P
Sbjct: 118 --STDNVFDGTRASSGESDPVSPANAYGAAKLAAERTFLERGSALA-LRVSLVHGWDPDG 174
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ P + ++ L G +++ D PV+V DV ++AL + +
Sbjct: 175 LRPNFATTCVR----ALRDGRELDVPEDHWNTPVHVDDVSAWVVALMG------ARRTGV 224
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
L++GGPDR+SR++ A +A+ +G L++PV
Sbjct: 225 LHLGGPDRLSRLEWARRIADAQGLDAGLLRPV 256
>gi|255099386|ref|ZP_05328363.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-63q42]
gi|255305244|ref|ZP_05349416.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile ATCC 43255]
Length = 290
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A S D+D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSINQPKYVILATTRS----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ + A IN V L+ +E LI
Sbjct: 48 TNVDNFILH-NKPDVVVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYGNGN- 163
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILAL 228
++ +++ + ++V +D+ P D+ KII+ +
Sbjct: 164 ---------NFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLAKIIIRI 202
>gi|423089711|ref|ZP_17078063.1| dTDP-4-dehydrorhamnose reductase [Clostridium difficile
70-100-2010]
gi|357557835|gb|EHJ39358.1| dTDP-4-dehydrorhamnose reductase [Clostridium difficile
70-100-2010]
Length = 290
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A S D+D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSINQPKYVILATTRS----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ + A IN V L+ +E LI
Sbjct: 48 TNVDNFILH-NKPDVVVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG 160
>gi|448726613|ref|ZP_21709007.1| dTDP-4-dehydrorhamnose reductase [Halococcus morrhuae DSM 1307]
gi|445793943|gb|EMA44507.1| dTDP-4-dehydrorhamnose reductase [Halococcus morrhuae DSM 1307]
Length = 301
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 28/306 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG G LG +++ ++ + ++ T+HST P ++D++
Sbjct: 2 QLLVVGANGLLGSNVI---AKALARDWECTGTYHSTD-PTF-------DIPLHELDVRDT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F + L + D V+NCAA++ CE +P+ A +IN + L+ +++
Sbjct: 51 DRFTTI-LDANEFDTVLNCAAMTDVDGCEENPEHAHAIN--GAAPGELARVCADRDLAFC 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G + Y E P VYG+SK+ E+ + + + R S +YG
Sbjct: 108 HVSTDYVFDGDAERSYTESAPTNPQQVYGESKLTGERTVRKAHDGALLARLSFVYGTHGA 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ P W+ L K E + F D+ P +++ L L+ D + +
Sbjct: 168 TGTLTGFP-AWVSDRLRKAESIPLFTDQTVTPSRAGQAATMLIDL----LAAD--VTGTV 220
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV------SASSVDRGVQSPADISMDITKLV 297
++ ++ + E + E S S+ PV S S+VDR P +D+ K+
Sbjct: 221 HIASRSCITPYEFGERIRERLDASRSMDVPVELLAEGSQSAVDRAATRPLHTCLDVEKVE 280
Query: 298 QTLNID 303
L+ D
Sbjct: 281 HVLDRD 286
>gi|237711070|ref|ZP_04541551.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA]
gi|423239166|ref|ZP_17220282.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
gi|229454914|gb|EEO60635.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA]
gi|392646953|gb|EIY40659.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
Length = 287
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 39/311 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
VLV G G LG + +L+ H ++F DV+
Sbjct: 2 NVLVTGANGQLGNEM------------------------RLMAQNSSHHYIFTDVEELDI 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F+A+ +K + ++VNCAA + END D A ++N + V L++ + +
Sbjct: 38 TDFNAILQTVKEKEIQIIVNCAAYTNVDKAENDFDIANALN--NIAVGRLANVAKAQNAT 95
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V+ G Y E+D P+ VYGK+K+A E+ I + N+ ILR++ +Y
Sbjct: 96 LIHISTDYVFNGNNHIPYTEDDITDPIGVYGKTKLAGEETIKKVGCNYIILRTAWLYSKW 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ V + +LS D+ P Y +D+ I + R + + +
Sbjct: 156 GNNFVKTMQKLTLEKDILS------VIFDQIGSPTYAKDLAHAISLIIERNMLNQQGIYH 209
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
N G S A+ + E+ G++ + I P+ + V P +D TK +T
Sbjct: 210 YSNEG---VCSWFDFAKEICELSGHNCN-ITPIHSQDYPSKVTRPHYSVLDKTKFKETFG 265
Query: 302 IDPVTYKDGVK 312
I +KD +K
Sbjct: 266 IPVPYWKDSLK 276
>gi|282164741|ref|YP_003357126.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola
SANAE]
gi|282157055|dbj|BAI62143.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola
SANAE]
Length = 288
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 23/239 (9%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIH 125
A +K +P ++ +S CE + AM N + F E +L +I+
Sbjct: 50 ARVVKQAKPQHLILTEEISSVEYCEKNRLDAMEFNTRGTRF-----FVEASSSLRPRVIY 104
Query: 126 LSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
LS+ V++G K Y E D + P+NVYG++K+ E + +K ++ LR +YG +
Sbjct: 105 LSSAFVFDGRKPGGLYAEHDHVNPINVYGETKLMGEVAV-DKAADHITLRLGDVYGNFSD 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V ++ S L+ G+K+E D P+Y+ DV K + LT + M L
Sbjct: 164 NFV------NFVVSSLNYGQKIELARDMYFSPIYIEDVAKAVRLLTL------ENMSGLY 211
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
NV G +R+S +M VA G ++ P+S + V+ P D+S+D +K+ + I
Sbjct: 212 NVAGTERISHYEMGLRVARAFGLKEDMLVPLSMEEMGLTVRMPKDLSLDTSKISTLIKI 270
>gi|386874689|ref|ZP_10116922.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386807558|gb|EIJ66944.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 249
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
V+ G G+LG + L K + S +L D+ + F
Sbjct: 5 VIIGCGFLGSKIFTNLKNNNKKVIGTNFQNTSNEFKKL------------DI-----TNF 47
Query: 68 DAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
D V L +PD+V+NCAA + E + A +N V ++ + + LIH
Sbjct: 48 DLVNSFLNKEKPDLVINCAANTDIDYLEKNEKFANMVNGIG--VENIAKTCKEISSKLIH 105
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII-YGPQTIS 184
+STD V++G + YKEED++ P+NVYGKSK+ EK + E +F I+R+++ Y Q
Sbjct: 106 ISTDSVFDGTQGLYKEEDDVKPINVYGKSKLLGEKLLQENLDDFIIIRTNLFGYHHQG-- 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
WI L + ++ F D P+ + + +IL N S +++
Sbjct: 164 ----KFLFNWILKNLKENKEFTGFEDIIFNPLEISFLSDLILKFGNMEYSG------IVH 213
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
+G + +++ V++I G++ LIK
Sbjct: 214 LGSDEIINKYDFGCEVSDIFGFNKKLIKK 242
>gi|149277579|ref|ZP_01883720.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
gi|149231812|gb|EDM37190.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
Length = 293
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 38/315 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVD-LK 62
++L+ G G LG H+ Q L ++ + Y + T S +PQ ++ D+ L+
Sbjct: 2 KILITGINGMLGGHIKQSLLSMDMVELYGASRTAASENIPQ--------EYMIGDLTVLE 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPS-SLVNWLSSFTENKEN 121
S + F + DV+V+CAA +CE D A NV S SL+ SF
Sbjct: 54 SYTRFKNIHF-----DVIVHCAAEVNLSLCEKDWAVAELANVTSTSLLTSNLSFDR---- 104
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I++STD V++G K Y E D+ P+N Y SK+ E + +F +LR++ IYG
Sbjct: 105 -FIYISTDSVFDGSKGNYTETDQTHPLNNYALSKLKGEHVVTSSVGDFIVLRTN-IYGAS 162
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P+ SL +W LS+G + + + P+Y+ + II + +
Sbjct: 163 --NPMRNSL-FEWAYKELSEGRAINGYDNVIFNPLYIGQLTNIIKKIICEGIPPG----- 214
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N +S+ + +A + G + I+P+S + D ++ P + S++ KL L
Sbjct: 215 IYNASCDGHISKFEFIIQLARMFGLNEKKIQPMSMNVEDELLKRPLNTSLNNRKLKSVL- 273
Query: 302 IDPVTYKDGVKLTLA 316
GV LTL+
Sbjct: 274 -------KGVDLTLS 281
>gi|302348458|ref|YP_003816096.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15]
gi|302328870|gb|ADL19065.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15]
Length = 283
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 36/311 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R LV+G TG LG L+ L K DVA T+H + P F +D+ +
Sbjct: 3 ERYLVLG-TGQLGSELVGLLRGEREKGKDVAYTYHGSD---------PFGF-GQQLDVTN 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K PDV++N A++ CE+D A+ +N + V ++ + +
Sbjct: 52 FELLEDLIIKV-SPDVIINAVAMTNVDACESDRARALKVNAEA--VKHVARAVRVVGSYM 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IH+STD V++G K Y+E++E P+N YG +K+ E + + ++R+S ++
Sbjct: 109 IHVSTDYVFDGTKGLYREDEEPNPINYYGLTKLLGEAYALSYDDSL-VVRTSGVF----- 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
K P ++ L +G V+ + P+ R + + ILAL + + ++
Sbjct: 163 --RDKGFP-SFVVRQLRQGRAVKAYAG-FYSPISARKLAEAILALA------ELRKTGII 212
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG--VQSPADISMDITKLVQTLN 301
NV G +RVSR Q+A VA+ G S PV+ G + P D S+DI++ LN
Sbjct: 213 NVAG-ERVSRYQLAVEVAKAFGLDPS---PVTEVKEVEGWVAKRPYDSSLDISRARALLN 268
Query: 302 IDPVTYKDGVK 312
D + ++ ++
Sbjct: 269 FDFYSLRENLR 279
>gi|91202893|emb|CAJ72532.1| similar to TDP-rhamnose synthetase, NAD(P)-binding [Candidatus
Kuenenia stuttgartiensis]
Length = 330
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 23 LSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV------FFDVDLKSGSGFDAVALKFGQ 76
++ + G P A H + P+ ++ P + +D++ G A+ +K +
Sbjct: 11 ITGVNGVPGYNAFRHFHSQYPEHVVAIRPTRYWPLRGEGIIPLDIEDVQGLAAL-MKTWK 69
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
+ +++ A + CE +P+ A +NV S+ N L + LL LSTD V+ G
Sbjct: 70 FNSILHAAGSCALKSCELNPEMAYRVNVQSA-KNILKIIGDRTIRLLF-LSTDLVFPGKS 127
Query: 137 S-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y E D ++PV VYGK+ V AE+ I + + I R S+ P IS + I WI
Sbjct: 128 SGCYTESDAVSPVTVYGKTMVMAEEIIAHEYPSAVIFRISL---PMGISVNGHAGAIDWI 184
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKII-LALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
S K ++DE R P Y D I +AL N+ + ++G +S
Sbjct: 185 LSRFKKNNPATLYYDEIRSPFYCEDFNSIAEIALENKICG-------IYHLGSHRYLSLY 237
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP--ADISMDITKLVQTLNIDP 304
Q+ ++V ++ GYS L+K ++ G P +++M KL+ L DP
Sbjct: 238 QIGQIVNKVGGYSPRLLK--GCMRIEAGPMPPRAGNVAMSNKKLLAALGFDP 287
>gi|115437410|ref|XP_001217803.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188618|gb|EAU30318.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1018
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 145/310 (46%), Gaps = 31/310 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ Q + + V +S P +L A DL+
Sbjct: 709 VLVTGATGLLGR---QVFNTFKSSGCLVVGQGYSRANPPTILKA----------DLEKPD 755
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A+ L +P +VV+CAA P +C+ DPD A +NV ++ L+ T + LI+
Sbjct: 756 DIHAL-LDDVKPQIVVHCAANRSPDLCDKDPDQARRLNVDATRA--LAKETVARNAFLIY 812
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + P N+YG+ K E + E+ + +LR ++YGP
Sbjct: 813 ISTDYVFPGKEGEAPYEVDSPTNPPNLYGQLKRDGEIAVLEETKDTGLGIVLRVPVLYGP 872
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSED- 236
+ +S +D+V S+ E D+ R P DV ++ + +++ E
Sbjct: 873 AKSN--SESAVNTLVDAVQKSQDENARVTMDDWAQRYPTNTEDVARVCRDIIIKYIKERS 930
Query: 237 --KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMDI 293
KQ+ +L DR+++ ++ E +AEI G S +I+ + + VQ P D +
Sbjct: 931 RIKQLPKVLQFSSEDRMTKYEICEKLAEIMGVSLGGMIRNQQGNDPNASVQRPYDTHLS- 989
Query: 294 TKLVQTLNID 303
TK +Q L ID
Sbjct: 990 TKALQELGID 999
>gi|329848962|ref|ZP_08263990.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
gi|328844025|gb|EGF93594.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
Length = 293
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 26/259 (10%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSF 115
D+DL +A ++ PDV+++ AA + E++PD A IN P L +S
Sbjct: 34 DIDLSRPDSLEA-PVRAASPDVIISSAAYTAVDKAESEPDLARRINGDAPGELARIAASL 92
Query: 116 TENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
L+HLSTD V+ G K Y E D P +VYG +K+A E+ I NF ILR+
Sbjct: 93 NVP----LLHLSTDYVFPGDKDGVYDEADTPEPASVYGATKLAGERQIAANTDNFVILRT 148
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ +Y P + ++ ++L G +++ D+ CP Y ++ + +L + +
Sbjct: 149 AWVYSPYGNN---------FVKTMLRLGKTRDEINVVADQHGCPTYAPEIARALLTVAQK 199
Query: 232 WLSE-DKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPA 287
++ D +++ + ++ G + AE + + RG + P++ S + PA
Sbjct: 200 IAADPDPKLRGIFHLTGTGETTWADFAETIFLESVKRGGKAVKVNPIATSDYPTPAKRPA 259
Query: 288 DISMDITKL--VQTLNIDP 304
+ + KL + L +DP
Sbjct: 260 NSRLSGAKLHSIYGLQLDP 278
>gi|302911314|ref|XP_003050465.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731402|gb|EEU44752.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 319
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 151/317 (47%), Gaps = 31/317 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++ VLV G TG LG+ + + G ++V T +S VD
Sbjct: 1 MPERTVLVTGATGLLGREVSASFG-LRG--WNVKGTGYSRA----------DGISTLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S A L+ +P V+V+CAA P + DP++A ++NV +S LS +++
Sbjct: 48 LSNESEV-ASLLEETKPQVIVHCAAQRFPDKVDKDPEAARALNVAAS--KSLSQLAVDRD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ GV + Y+ + E P N+YG++K+ E+ + E + +L
Sbjct: 105 IFVIYISTDYVFPGVPGDAPYEADAEPRPTNLYGQTKLDGERAVLETFAKAGKEGLGVVL 164
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T + ++ + + ++G +V H R P D+ ++ ++ +
Sbjct: 165 RVPVLYGNAETPAESAVNVLMDALWKAQTQGIEVNMDHWAIRYPTNTEDIGRVCHDISVK 224
Query: 232 WL----SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSP 286
+L + + +L DR+++ ++ ++ +I ST IKP + + VQ P
Sbjct: 225 YLDTAPGDRAGLPHILQFSSEDRMTKYEIVQLFGDIMDLSTEGIKPNTEGNDPNASVQRP 284
Query: 287 ADISMDITKLVQTLNID 303
D + TK ++ L ID
Sbjct: 285 YDCHLS-TKALRDLGID 300
>gi|331004825|ref|ZP_08328243.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989]
gi|330421356|gb|EGG95604.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989]
Length = 304
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 58 DVDLKSGSGFDAVA---LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
++DL S S D + L F P +VVN AA + E++P A +N S V +L+
Sbjct: 39 ELDLSSISSVDEIVERLLCFQTPSLVVNAAAYTAVDKAESEPSLADKVNHTS--VGFLAQ 96
Query: 115 FTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ LIH+STD V++G + Y E D+++P+ VYG++K E+ + + ILR
Sbjct: 97 YCAKGAIPLIHISTDYVFDGTATTAYTESDDVSPLGVYGETKWLGEQAVKSVLAQHIILR 156
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+S ++G + V L + + E++ D+ CP Y D+ + IL + R+
Sbjct: 157 TSWVFGISGNNFVKTMLRLS------ADREQLTIVSDQYGCPTYAGDIARAILCIVKRYA 210
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGY--STSLIKPVSASSVDRGVQSPAD 288
S + + G +VS + ++ + A RG+ + I P+ +S+ PA
Sbjct: 211 SGQSLNWGVYHCVGEGKVSWYEFSQAILNEAYARGFMPNKPQIIPIPSSAYPTPAARPAY 270
Query: 289 ISMDITKLVQTLNIDPVTYKDGV 311
+ KL + N +++ G+
Sbjct: 271 SVLSTDKLAREFNYSVPSWRQGL 293
>gi|159898981|ref|YP_001545228.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159892020|gb|ABX05100.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 286
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 33/292 (11%)
Query: 5 RVLVVGGTGYLGQHL--LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
R+L+ G +GYLGQ + + I K Y + P P + DL
Sbjct: 3 RLLITGASGYLGQRVAYFAQQTTIWDKVY---SQTWRNP---------PTAGEHVACDLA 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTENKEN 121
+ +A+ L+ QP +++ AA++ P + D A+ ++NV +S L+ + +
Sbjct: 51 DQAQLEAL-LEQIQPTAIIHTAAVT-PAMGPAMTDQALWAVNVQASAT--LARWAAQHQV 106
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H+S+D V+ G ++ Y E D AP++ YG SK A E + AI R+S++YG
Sbjct: 107 RLVHVSSDAVWGGREAAYTESDVPAPIHPYGASKAAGEAVVAALDPQAAIARTSLLYGQN 166
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ P + + +GE+ F DE RCPV+V DV + ++ L++ +
Sbjct: 167 PLDPNTT------MALAMLRGERHGVLFTDELRCPVFVEDVAQALIE-----LAQKPSLY 215
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ ++ GP +SR ++ + + G ++ + + ++ G++ P+ + +D
Sbjct: 216 GIFHLVGPQILSRFELGQALLAWNGIDSTGLP--AGTTTASGLRRPSRVVVD 265
>gi|432900828|ref|XP_004076715.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Oryzias latipes]
Length = 326
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 143/310 (46%), Gaps = 24/310 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G TG LG+ + + E + + V T + P+ F D+
Sbjct: 19 KVLVTGATGLLGRAVCK---EFQSNGWSVIGTGYRRAQPR-----------FLRCDMTDE 64
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
++ L +PDV+V+CAA P V E ++A+ +NV ++ ++ L I
Sbjct: 65 DAVRSL-LHEHKPDVIVHCAAERRPDVMERHTEAAVHLNVHAT--GTVAKEAAVCGALFI 121
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G Y E+D PVNVYG+SK+ E+ C ILR +++G + S
Sbjct: 122 YISTDYVFDGRSPPYGEDDCPNPVNVYGRSKLEGERESLRHCPGAVILRVPVLFG-EVES 180
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
V ++ W+ V E D C R P RDV + L R +D ++ +
Sbjct: 181 VVESAVTALWL-KVEEADEDGCSALDHCLQRFPTDARDVAAVCRKLAERG-RQDPSIRGI 238
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLN 301
+ G +++++ +MA +A+ ++ + P++ P + ++ ++L + L+
Sbjct: 239 FHFSGKEQMTKYEMAVAMAQAFNLPSNHLIPLTEQPAA-AAPRPINSQLNCSRLELLNLS 297
Query: 302 IDPVTYKDGV 311
++P + +
Sbjct: 298 VEPRPFSTAI 307
>gi|313114188|ref|ZP_07799740.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623597|gb|EFQ07000.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 280
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G++G +LQ + +GK Y+ L ALP F + +
Sbjct: 2 KKILITGAGGFVGSRILQ---QWQGK-YE--------------LCALPKGFFCTADEALT 43
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A+ PDV+++ AALS C P A NV L WL+ + + L
Sbjct: 44 RAQVEAL-----HPDVILHTAALSDTSYCAQHPAEAYRANV--ELPVWLARAAQQTKAKL 96
Query: 124 IHLSTDQVYEGVKSFYKEEDEIA--PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-P 180
+ S+DQVY GV+ + +A P N+YG+ K+ AE+ + E C + LR+S +Y P
Sbjct: 97 VAFSSDQVYAGVQQQGPLPETLALHPANIYGQYKLKAEQRVLELCPDSVHLRASWMYDLP 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
P+ +LP+ + + L KGE + F ++ R YVR V++
Sbjct: 157 GYGLPIRGNLPLNLLRAAL-KGEALRFSRNDHRGVTYVRQVIE 198
>gi|310792470|gb|EFQ27997.1| RmlD substrate binding domain-containing protein [Glomerella
graminicola M1.001]
Length = 317
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 35/321 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS K V+V G TG LG+ + + +++G + V T +S F VD
Sbjct: 1 MSGKDVVVTGATGLLGRQVARAF-DLQG--WSVKGTGYSRA----------DGVSVFKVD 47
Query: 61 LKSGSGFDAVALKF---GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
L G A KF +P VVV+CAA P ++DPD+A ++NV ++ L+
Sbjct: 48 L----GDTAEVEKFLDESKPQVVVHCAAQRFPDKVDSDPDAARALNVAAT--KSLAKLCA 101
Query: 118 NKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-----CSNFA 170
+ LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E+ C
Sbjct: 102 ARSTLLIYISTDYVFSGKPGEAPYEADAPTGPTNLYGQTKLDGELAVLEEYKAAGCEGLG 161
Query: 171 -ILRSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+LR ++YG T + ++ ++ + KV+ H R P DV ++ +
Sbjct: 162 LVLRVPVLYGKADTPAESATNILMETLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDI 221
Query: 229 TNRWL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST-SLIKPVSASSVDRGVQS 285
++L + M +L D++++ ++ + AEI S +I + + VQ
Sbjct: 222 AVKYLEAGDRSSMPKVLQFSSEDKMTKYEICQKFAEIMSLSMDGIIANTEGNDPNASVQR 281
Query: 286 PADISMDITKLVQTLNIDPVT 306
P D + T+ ++ L ID T
Sbjct: 282 PYDCHLS-TRALKELGIDVST 301
>gi|159904976|ref|YP_001548638.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6]
gi|159886469|gb|ABX01406.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6]
Length = 285
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 13/221 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD VVN AA++ +CE + + A N + L ++ + + L H+STD V++GVK
Sbjct: 65 PDFVVNTAAMTNVDLCEKEKELAYKSN--ALLAEYIGKVCKKTGSKLCHISTDYVFDGVK 122
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E D I P+N YG +K E+ + E N +I+R S YG SPV + W+
Sbjct: 123 GNYVETDPINPINYYGFTKAEGERLLNEIDYDNKSIVRISTPYG---FSPVKLNF-YTWV 178
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
L + + D+ + D+ + +L + N LS +++ GG +++SR +
Sbjct: 179 LESLKCEKPINIVTDQYTTSTNLLDLSEFMLKIQNDDLSG------IIHFGGSEKLSRYE 232
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
A ++E + LI P+ +S ++ + P D S T L
Sbjct: 233 FALKISEKYNLNDKLINPIKSSELNWIAKRPMDTSFGDTYL 273
>gi|409204080|ref|ZP_11232279.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas flavipulchra
JG1]
Length = 289
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 34/296 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+V++ G TG LG+ L Q LS EI G + AA PL +L D H+ V +D
Sbjct: 3 KVMITGATGLLGRALCQELSSTHEILGCGFSRAAA----PLHKL--DLADHNSVLDFLDS 56
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S P+V+++ AA P CE D + +++NV ++ +L+ ++
Sbjct: 57 HS-------------PEVLIHAAAERRPEHCERDQAATLALNVAAT--EFLAQACRERDI 101
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+STD V++G + Y E D PVN YG++K AAE+ I + I+R ++YG
Sbjct: 102 RFFFISTDYVFDGTSAPYVETDITNPVNFYGQTKQAAERAILADSALHTIVRVPVLYGE- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + I L H R P +V D+ +LT + + +
Sbjct: 161 -VKTLEES-AVTVIAKQLLTNPASSHDHWAIRYPTHVNDI-----SLTLKDVIAQPSLGG 213
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
++++ G ++ +MA+V+A+ T + P+S S D P + ++ T+L+
Sbjct: 214 IIHISGNQAFTKYEMAQVMAKALQLPTQDLMPLSQPSHD--ATRPQNCALKDTRLI 267
>gi|219848619|ref|YP_002463052.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485]
gi|219542878|gb|ACL24616.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485]
Length = 473
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
L+ GGTGYLG L++ + G P VA H TP P ++ +DL+ +
Sbjct: 191 LITGGTGYLGNTLIR-HARARGLPI-VATFHRQTPPPST-------DITWYPLDLRDPTA 241
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
+ + QP V+++ A + +PD M+I +++ LIH+
Sbjct: 242 VRRLITEV-QPAVIIHTA------FRQYEPD-LMAIT--GEGAGHVAAAAAEIGARLIHM 291
Query: 127 STDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
S+D +++G K+ Y E D P+ YG++K AE+ + + AI+R+S+IYG P
Sbjct: 292 SSDVIFDGEKAGAYTEADPPNPITDYGRAKARAEELVQHHHPHAAIVRTSLIYG---FDP 348
Query: 186 VPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ + +++GE+ E F+DE RCPV+V D+ +L L + ++N
Sbjct: 349 LDRH---SAFALAVARGERTEKLFYDELRCPVFVDDLAAALLDLAQ------SDYRGVIN 399
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ G + +SR + ++A+ G I V A S + P + ++DI++ +
Sbjct: 400 LAGAETLSRYEWGRLLAQAHGLDPDRI--VGALSAESPTPRPRNCALDISRAL 450
>gi|257077379|ref|ZP_05571740.1| dTDP-4-dehydrorhamnose reductase [Ferroplasma acidarmanus fer1]
Length = 275
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 21/255 (8%)
Query: 41 PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
L +L +++P S +DL++ + + K+ D V+NCAA++ CE + DSA
Sbjct: 15 ALSSILENSIPLSHDV--IDLRNVNNIENTLDKY-SFDTVINCAAMTSVDKCEIEIDSAY 71
Query: 101 SINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK 160
IN S + ++ + LIH+STD V+ G K Y E+D P+N YG SK+ +
Sbjct: 72 YINGLS--MKYIGDYCRENNKYLIHVSTDYVFNGNKGNYTEDDISYPINYYGLSKLIGDT 129
Query: 161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD 220
+ N I+R+S +YG + + P+ ID L + F D PV
Sbjct: 130 YA-NSYQNSLIIRTSGVYGAKN------NFPLYVIDR-LRNNSGINAF-DNYYSPVNANV 180
Query: 221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
+ I L D ++ +LNV GP R+SR + A +A+ G + +LI +SV
Sbjct: 181 LAHSISKLL------DLKLTGILNVSGP-RLSRYEFALKIADKFGLNKALINKTDYNSVK 233
Query: 281 RGVQSPADISMDITK 295
+ P D S++ K
Sbjct: 234 FIAKRPYDSSLNNEK 248
>gi|347831528|emb|CCD47225.1| similar to methionine adenosyltransferase 2 subunit beta isoform 2
[Botryotinia fuckeliana]
Length = 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 28/314 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K L+ G TG LG+ +L+ + ++ T S P +L VDL S
Sbjct: 3 KTALITGATGLLGRQVLKVFDR---ENWNTVGTGFSRAKPPTILK----------VDLAS 49
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
A AL +P VV++CAA P C+NDP+ ++N+ +S L+ + L
Sbjct: 50 EPEV-AKALNESKPQVVIHCAANRFPDKCDNDPEGTRALNIAASAS--LAKLCAEQSIFL 106
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
+++STD V+ G + + Y+ P N+YG++K EK + YEK +LR
Sbjct: 107 VYISTDYVFPGTEGDAPYETSHIANPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRVP 166
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++YG + + + K ++ H R P DV +++ + ++L
Sbjct: 167 VLYGEGEPEESAVGVLVNSVWKAQEKDANIKMDHWALRYPTNTEDVGRVLSEIATKYLES 226
Query: 236 DKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMD 292
L +L D+ ++ ++ ++ AEI G ++ + + VQ P D +
Sbjct: 227 KDPSSLPRVLQFSSEDKFTKYEICQLFAEILGLPLDGMVANTEGNDPNASVQRPYDCHLS 286
Query: 293 ITKLVQTLNIDPVT 306
TK ++ L I+ T
Sbjct: 287 -TKALKDLGINVAT 299
>gi|400600865|gb|EJP68533.1| RmlD substrate binding domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 315
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 31/315 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + V++ G TG LG+ + + K ++V T S VD
Sbjct: 1 MVDRTVVITGATGLLGRQVSRVFRR---KGWNVKGTGFSRA----------DGVDVLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S + + L+ P+V+V+CAA P E DP+ A +NV S + L+ K
Sbjct: 48 LGNPSEIEKL-LEETNPEVIVHCAAERFPDKVEKDPEGARKLNV--SATSSLAQAAAAKG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE----KCSNFAILRS 174
LI++STD V+ G ++ Y+ + E P N+YG++K+ EK + K + +LR
Sbjct: 105 AFLIYISTDYVFPGRPGEAPYEADSETNPPNLYGQTKLDGEKAVLAVNGGKAGSAVVLRV 164
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
++YG +P ++ + +D V ++ +K++ H R P DV ++ +
Sbjct: 165 PVLYG-SAETPAESAVNVL-LDGVWKSQTEDKKIKMDHWAPRYPTNTEDVGRVCHDIAEH 222
Query: 232 WLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPAD 288
+L ++ L +L DR+++ +M + AEI G I+P + + VQ P D
Sbjct: 223 YLRASDRVSLPKILQFSSEDRMTKYEMCQKFAEIMGLPLDNIEPDTKGNDPNASVQRPYD 282
Query: 289 ISMDITKLVQTLNID 303
+ TK +++L+I+
Sbjct: 283 THLS-TKTLKSLDIN 296
>gi|254973883|ref|ZP_05270355.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-66c26]
gi|255091268|ref|ZP_05320746.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile CIP 107932]
gi|255312927|ref|ZP_05354510.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-76w55]
gi|255515686|ref|ZP_05383362.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-97b34]
gi|255648780|ref|ZP_05395682.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-37x79]
gi|260682000|ref|YP_003213285.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196]
gi|260685598|ref|YP_003216731.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291]
gi|306518897|ref|ZP_07405244.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile QCD-32g58]
gi|384359554|ref|YP_006197406.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile BI1]
gi|260208163|emb|CBA60476.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196]
gi|260211614|emb|CBE01844.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291]
Length = 290
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A + D+D+ +
Sbjct: 2 KILITGSNGQLGKELVSQLE----------AINQSINQPKYVILATTRN----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDV+VNCAA + CE++ + A IN V L+ +E L+
Sbjct: 48 TNIDNFILH-NKPDVIVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLV 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG 160
>gi|332293420|ref|YP_004432029.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter sp. 4H-3-7-5]
gi|332171506|gb|AEE20761.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter sp. 4H-3-7-5]
Length = 297
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 47/308 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF---DVD 60
K+++V G G LG LL+ + HH+ ++F D+D
Sbjct: 13 KKIVVTGALGQLGMALLE------------QSKHHA-----------DFEYIFLSRKDLD 49
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S ++ L QPDVV+N AA + E+D D A IN + V +L+ + ++
Sbjct: 50 ITSRDNI-SIVLDKHQPDVVINTAAYTAVDAAEDDKDQAFLIN--EAAVGYLAEECKKRK 106
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFI-YEKCSNFAILRSSIIY 178
LIH+STD V++G KS Y E D+ P VYG SK+ E+ I + +AI+R+S +Y
Sbjct: 107 CALIHISTDYVFDGDKSTAYVESDKPNPQTVYGASKLGGEQLIEASNITKYAIIRTSWVY 166
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++ ++L GE ++ +D+ CP + D+ IL + R L E
Sbjct: 167 SV---------YGHNFVKTMLRLGEERGQLSVVNDQLGCPTWANDLADTILTVA-RELKE 216
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
D + G ++ A+ + E LI PV++ + P + +D K
Sbjct: 217 DSFGVYHFSNKGS--ITWYDFAKAIFE-HAQIDVLITPVTSDLFPTKTKRPKNSVLDTHK 273
Query: 296 LVQTLNID 303
+ + +D
Sbjct: 274 IEKQFKVD 281
>gi|255654310|ref|ZP_05399719.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-23m63]
gi|296452600|ref|ZP_06894294.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP08]
gi|296880988|ref|ZP_06904934.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP07]
gi|296258561|gb|EFH05462.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP08]
gi|296428009|gb|EFH13910.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP07]
Length = 290
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ + A + D D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSMSQPKYAILATTRN----DFDIYNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ ++A +N V L+ +E LI
Sbjct: 48 TNVDNFILN-NKPDVVVNCAAYTKVDACEDNIETAYKVNALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+E+ + P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDSKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYGNGN- 163
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILAL 228
++ +++ + ++V +D+ P D+ KII+ +
Sbjct: 164 ---------NFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLTKIIIRI 202
>gi|37678486|ref|NP_933095.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016]
gi|37197226|dbj|BAC93066.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016]
Length = 293
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 135/313 (43%), Gaps = 43/313 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+VG +G LG L++ L T H L LD +D+
Sbjct: 2 RVLIVGSSGQLGHCLVRSLQ-----------TEHDI----LALDRQ-------QLDICEE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V F QP V+N AA + E++P+ A +N + L+ + L+
Sbjct: 40 QAVEKVFATF-QPQFVINAAAYTAVDKAESEPEMAYRVNEEGPKL--LAQECHHHGCPLV 96
Query: 125 HLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K+ Y E+D AP N+YG SK+A E + CS + ILR+S ++
Sbjct: 97 HISTDYVFDGDKNGLYCEDDRPAPGNIYGMSKLAGEHAVQHACSQYYILRTSWVF----- 151
Query: 184 SPVPKSLPIQWIDSVLSKG-EKVEF--FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ ++L +G E+ + D+ P Y D+ ++I L R+ +
Sbjct: 152 ----SEFGNNFVKTMLRQGAERTQLGIVSDQVGGPTYAGDIARVIGRLLERFQFGEPVEY 207
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITK 295
L + G VS + A+ + + L +KP+S P + +D TK
Sbjct: 208 GLYHFSGMPHVSWFEFAQAIFGLAHEQGVLKRKVELKPLSTREYPTAAIRPMNSRLDSTK 267
Query: 296 LVQTLNIDPVTYK 308
L L ++ +K
Sbjct: 268 LKSQLQLEASDWK 280
>gi|189424718|ref|YP_001951895.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ]
gi|189420977|gb|ACD95375.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ]
Length = 277
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 44/317 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LVVG G LGQ L+ L E G+ D LP D+D+
Sbjct: 2 ILVVGANGMLGQDLMGLLGE-RGRGVD-----------------LP------DIDITDMV 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
V +P VV+NCAA + CE++ ++AM +N V +L+ T L+
Sbjct: 38 SVQQVLTAL-KPKVVINCAAYTDVDGCESNTETAMQVN--GEGVAFLALVTREIGAKLVQ 94
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G K S Y+E+D P+N+YG+SK+A E + N ++R+ +YG +
Sbjct: 95 VSTDYVFDGSKGSPYREDDLQQPLNIYGESKLAGELNVDINPDNL-LVRTQWLYGLHGKN 153
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V L + SVL+ D+ P + D+ + I+AL DK + +
Sbjct: 154 FVETMLKLGQEKSVLT------VVDDQIGSPTWTMDLARGIIALV------DKDCRGTYH 201
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
S A+ + + G ++ P++ ++R + P ++D +KLV +P
Sbjct: 202 CANSGHTSWNGFAKAIFDEAGLPVQVL-PMTTEQLNRPARRPLYSTLDCSKLVADTGFEP 260
Query: 305 VTYKDGVK--LTLAAEA 319
+++ +K L L EA
Sbjct: 261 QAWREALKQYLNLRKEA 277
>gi|320586902|gb|EFW99565.1| NAD dependent epimerase dehydratase family protein [Grosmannia
clavigera kw1407]
Length = 322
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 146/319 (45%), Gaps = 34/319 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +K VLV G +G LG+ +++ E + V T S + L+ V+
Sbjct: 3 MCRKSVLVTGASGLLGRQVVEVF---EQSNWAVTGTGFSRANGKTLIK----------VN 49
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L++ + + AL +PDVVV+CAA P ENDP+ +N+ +S L+ ++
Sbjct: 50 LENSTEVKS-ALDEVKPDVVVHCAANRFPDKVENDPEGTRRLNIEASRK--LAQLCASRG 106
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIY-----------EKCS 167
LI++STD V+ G ++ Y+ E AP N+YG++K+ E+ + K
Sbjct: 107 ITLIYISTDYVFPGKPGEAPYEVEAAPAPTNLYGQTKLDGERAVLGVYNEAQQLEKTKKG 166
Query: 168 NFAILRSSIIYGPQTISPVPKSLPI--QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
+ ILR ++YG + P ++ + ++ V ++G V+ R P DV +++
Sbjct: 167 HAVILRVPVLYG-RVEKPAESAINVLMDIVNKVQAEGVTVKMDDWSIRYPTNTEDVARVL 225
Query: 226 LALTNRWLSE-DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
+ ++ D + +L DR ++ ++ + AE G + + P +Q
Sbjct: 226 KDIATKYTEAVDADLPPVLQFSSEDRFTKYEICRLFAETLGVNIDRLLPDPTGGNTSSIQ 285
Query: 285 SPADISMDITKLVQTLNID 303
P D + TK ++ L ID
Sbjct: 286 RPYDCHLS-TKALKDLGID 303
>gi|340379657|ref|XP_003388343.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Amphimedon queenslandica]
Length = 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 23/314 (7%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+K +VL+ G +G LG+ + Q L + ++V +S +L+ DL
Sbjct: 3 TKGKVLLTGASGLLGRQIYQCLKK---SSWEVMGLAYSRGGEELV-----------KADL 48
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F +P +V++ AA P + D D A +NV ++ L+ + +
Sbjct: 49 LDFEKMREIMTDF-KPAIVIHSAAERRPDKVQKDEDKARGLNVTAT--QELTRLCQELGS 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+++STD V++G Y+ +D P+N YG+ K+ EK + + AI+R I+YGP
Sbjct: 106 FLVYISTDYVFDGTSPPYRHDDAPNPLNTYGQLKLDGEKAVSSYIDS-AIVRVPILYGP- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S ++LS + E R P + RD+ + A +++ L++ + +
Sbjct: 164 -VETLDESAVTILFKALLS-NDPAPMSDYEKRYPTHTRDIGVFLEAFSSKVLTDREICRG 221
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ GG + +++ M +A++ S+ + PV S G P + D ++ +
Sbjct: 222 SWHFGGSEVLTKYDMVLKMAKVFKLSSKHLIPVREPS--GGAPRPFNNEFDYSQTKKHFT 279
Query: 302 IDPVTYKDGVKLTL 315
+D +++DG+K L
Sbjct: 280 MDITSFEDGIKTVL 293
>gi|386836368|ref|YP_006241426.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|76262890|gb|ABA41505.1| dTDP-4-dehydrorhamnose reductase [Streptomyces hygroscopicus subsp.
jinggangensis]
gi|374096669|gb|AEY85553.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451789726|gb|AGF59775.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 324
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 23/270 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +GYL H+ L+ + + V ++ + LP+ + VD+ SG
Sbjct: 34 RILILG-SGYLAGHIAARLTRLGAE--TVLSSRRAPVLPE------SRGVRWKQVDVTSG 84
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +PD VV S CE+ P+ A + + +++ + + LL+
Sbjct: 85 PQVAAL-MDAVEPDAVVAVHGPSDITWCESHPEEAYATH--HGGARNIAAALDGRPVLLV 141
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G Y E + PVN YG++K+AAE+ + + S +LR S++YG +
Sbjct: 142 --STDNVFSGEDESYGESAQTFPVNAYGRAKLAAERELLDTSSAL-VLRVSLVYGWEDRG 198
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P P L + S++ K E++ D PV+V DV L +S + L+
Sbjct: 199 PRPNFL-TSVVRSLMRK-EQLRIPDDHWNTPVHVEDVAAWATTL----MSSGRTGT--LH 250
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
+GGP R+ RV A +AE G LI P
Sbjct: 251 LGGPRRIGRVDWARHIAEQLGVDPMLIVPT 280
>gi|46124817|ref|XP_386962.1| hypothetical protein FG06786.1 [Gibberella zeae PH-1]
Length = 348
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 33/328 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ + VLV G TG LG+ + K ++V T S F VD
Sbjct: 1 MTDRTVLVTGATGLLGREVSAAFGL---KNWEVKGTGFSRA----------DGISTFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + L +P V+V+CAA P + DP+ A ++NV +S L+ ++
Sbjct: 48 LGNENEV-STFLDETKPQVIVHCAAQRFPDKVDKDPEGARALNVAASKA--LAKLAAERD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ GV + Y+ + E P N+YG++K+ E+ + E +L
Sbjct: 105 TFVIYISTDYVFPGVPGDAPYEADAEPRPTNLYGQTKLDGERAVLETFKEAGKEGLGVVL 164
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G ++ H R P D+ ++ ++ +
Sbjct: 165 RVPVLYGNAETPSESAVNVLMDALWKAQTQGAQISMDHWAIRYPTNTEDIGRVCHDISVK 224
Query: 232 WL----SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSP 286
+L + + +L DR+++ ++ + EI G ST I P + + VQ P
Sbjct: 225 YLDTPSNNRASLPNILQFSSEDRMTKYEIVALFGEIMGLSTEGITPNTEGNDRNASVQRP 284
Query: 287 ADISMDITKLVQTLNIDPVT--YKDGVK 312
D + TK ++ L ID T +KD K
Sbjct: 285 YDCHLS-TKALKDLGIDVSTCDFKDETK 311
>gi|337287918|ref|YP_004627390.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobacterium sp. OPB45]
gi|334901656|gb|AEH22462.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobacterium geofontis
OPF15]
Length = 277
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 42/311 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G L + + E K Y AA P+ LD
Sbjct: 2 KFLITGARGQLAREFISYFQE---KGYGFAA------FPKDELDV--------------- 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S F+ V +K +PD+++NC+A + + E + A +N + N S E K L
Sbjct: 38 SDFEKVYQTIKEIKPDIIINCSAYNQVDLAEKEKHLAYKVNTIG-VYNLAISAREIKAKL 96
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H STD V++G K+ FY EED+ P+N YGKSK+ E FI E N+ I R S +YG
Sbjct: 97 -VHYSTDYVFDGTKTGFYTEEDQPNPLNEYGKSKLFGEFFIQEVLENYLIFRVSWVYGKG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T + + K ++ K E ++ DE P R +V++ L + L+ +
Sbjct: 156 TQNFLYK------LEEWAKKQEVLKIAVDEFSVPTSTRTIVEVTLKALDEGLT---GLSH 206
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
L N G SR + A+ +++G + LI P + + + P M K+ + L
Sbjct: 207 LTNSG---YASRYEWAKEYFKLKGIN-KLIYPALQADFNLPAKRPKWSVMSNEKISKALG 262
Query: 302 IDPVTYKDGVK 312
I +++ +K
Sbjct: 263 ITIRDWREELK 273
>gi|84872457|gb|ABC67268.1| VldD [Streptomyces hygroscopicus subsp. limoneus]
Length = 294
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 23/270 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +GYL H+ L+ + + V ++ + LP+ + VD+ SG
Sbjct: 4 RILILG-SGYLAGHIAARLTRLGAE--TVLSSRRAPVLPE------SRGVRWKQVDVTSG 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +PD VV S CE+ P+ A + + +++ + + LL+
Sbjct: 55 PQVAAL-MDAVEPDAVVAVHGPSDITWCESHPEEAYATH--HGGARNIAAALDGRPVLLV 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G Y E + PVN YG++K+AAE+ + + S +LR S++YG +
Sbjct: 112 --STDNVFSGEDESYGESAQTFPVNAYGRAKLAAERELLDTSSAL-VLRVSLVYGWEDRG 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P P L + S++ K E++ D PV+V DV L +S + L+
Sbjct: 169 PRPNFL-TSVVRSLMRK-EQLRIPDDHWNTPVHVEDVAAWATTL----MSSGRTGT--LH 220
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
+GGP R+ RV A +AE G LI P
Sbjct: 221 LGGPRRIGRVDWARHIAEQLGVDPMLIVPT 250
>gi|340623551|ref|YP_004742004.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis X1]
gi|339903819|gb|AEK19261.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis X1]
Length = 274
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD V+N AA++ +CE + + A N S+ ++ + + L H+STD V++G
Sbjct: 64 NPDFVINTAAMTNVDLCEKEKELAYKSNALSA--EYIGKACKKTGSKLCHISTDYVFDGE 121
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D I P+N YG +K E+ + E N +I+R S YG SPV + W
Sbjct: 122 KGNYIETDPINPINYYGVTKAEGERLLNEIDYDNKSIVRISTPYG---FSPVKLNF-YTW 177
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L + + D+ + D+ + ++ + LS +++ GG +++SR
Sbjct: 178 VLESLKSEKPINIVTDQYNTSTNLNDLSEFMMKIQKNDLSR------IIHFGGSEKLSRY 231
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ A ++E + LI P+ +S ++ + PAD S+
Sbjct: 232 EFALKISEKYNLNDKLINPIKSSELNWIAKRPADTSL 268
>gi|350545358|ref|ZP_08914847.1| dTDP-4-dehydrorhamnose reductase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526861|emb|CCD39394.1| dTDP-4-dehydrorhamnose reductase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 329
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 128/277 (46%), Gaps = 30/277 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL++GG G++GQ L E+ + VA + P L H + +D
Sbjct: 17 VLIIGG-GFVGQCLA---DELLSNGHRVAIACRNRP------QGLRHRDRWIQLDATDAV 66
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
F A+ + +P VVV S C DP A I+ S++ F LL+
Sbjct: 67 AFRK-AVGWLRPSVVVLVNGPSDISECAKDPVEAARIH--SAVARNACEFAPTAYKLLV- 122
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STD V++G ++ E P+N YG++K+AAE+ ++ F I R+S+IYG +
Sbjct: 123 -STDNVFDGRRTTCTEAVTPEPLNAYGRAKLAAERILHAYGGQFLIARTSLIYGWEEDQR 181
Query: 186 VPK---SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +L IQ L+ E +E D P+ V D KI R L E+ + L
Sbjct: 182 GWQNFFALSIQ----RLAFAETLEVPADLWNTPIVVADAAKIY----RRCLEEN--VTGL 231
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIK--PVSAS 277
L+V GP R+SR+ A ++A G+ LIK PV AS
Sbjct: 232 LHVAGPQRISRLDWARLLAAEFGFDAGLIKAVPVQAS 268
>gi|408484425|ref|ZP_11190644.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. R81]
Length = 289
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 120/248 (48%), Gaps = 18/248 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + + E++PD+A +IN + + E + L LIH STD V+
Sbjct: 50 RPHLIINAAAHTAVDLAESEPDAAFAINAIAPGI-----LAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y+E D P+ VYG+SK+A E+ I + ILR+S +Y S K+
Sbjct: 105 DGSKPAPYRESDTPNPLGVYGQSKLAGEQAIAAVGGEYLILRTSWVY-----SNHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + AL RW + + + ++
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGSIANSTRALIERWQAGEPGEWGIYHLSAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S AE + + +G + + ++P+ +S+ + P + +D ++L Q ++ ++
Sbjct: 219 SWFGFAEAIGDHLRQQGKACAELEPIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPHWQ 278
Query: 309 DGVKLTLA 316
D ++ LA
Sbjct: 279 DALRECLA 286
>gi|24375660|ref|NP_719703.1| dTDP-4-dehydrorhamnose reductase family [Shewanella oneidensis
MR-1]
gi|24350574|gb|AAN57147.1| dTDP-4-dehydrorhamnose reductase family [Shewanella oneidensis
MR-1]
Length = 306
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 23/269 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S + +DL
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSCAEANI-----------HKLDLTQAI 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + +P+V+V+CAA P V E P+ A+++N+ +S L+ + L++
Sbjct: 50 AVEAFIAR-ERPEVIVHCAAERRPDVSEQSPEQALALNLSAS--QTLAKAAKQHGAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ PVN YG+SK+ E + S FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAAPNPVNFYGESKLQGETCVLNTDSRFAVLRLPILYG--EVTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + I+ +L S+ ++V+ + R P D+ I L R L + + +
Sbjct: 165 LSESAVLVLINQLLDSRPQRVDAW--AIRSPTSTADIAGAIAKLIKRQLHAADVLG-IYH 221
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
P +++ QM + E+ T+ + P
Sbjct: 222 FSSPQTMTKYQMLLSLGELLAIDTAHLTP 250
>gi|225556964|gb|EEH05251.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus G186AR]
Length = 329
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 38/324 (11%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 2 QRTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD---- 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ V + +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L
Sbjct: 57 -----EGVMITGLKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSIL 109
Query: 123 LIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSII 177
LI++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++
Sbjct: 110 LIYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVL 169
Query: 178 YGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
YGP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 170 YGPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLS 227
Query: 235 ---------ED------KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV 279
ED K + +L D +++ Q+ + +AEI G + PV
Sbjct: 228 LFVGAAADREDDGGFSFKSLPRILQFSSEDAMTKYQICQTLAEILGLPLPGMMPVKNGPK 287
Query: 280 DRGVQSPADISMDITKLVQTLNID 303
VQ P D + T+ ++ + ID
Sbjct: 288 PGEVQRPYDTHLS-TEELRRIGID 310
>gi|384484132|gb|EIE76312.1| hypothetical protein RO3G_01016 [Rhizopus delemar RA 99-880]
Length = 283
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 12/247 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDV+V+CAA P V E D + +NV + L++ ++K +LI++STD V++G
Sbjct: 44 QPDVLVHCAAERRPDVAEKDQSGVLRLNVETP--RNLATICKSKGVMLIYISTDYVFDGT 101
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y+ +D+ P+ YG++K+ EK I E + ILR I+YG + +S I
Sbjct: 102 SPPYEVDDKPNPLQFYGQTKLDGEKVIREVYPDAVILRVPILYGATEYN--GESAVNVLI 159
Query: 196 DSVLSKG-EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
D+VLSK KV+ R P V DV +++ L + +++ + ++ + + + +++
Sbjct: 160 DTVLSKKVSKVDNVAQ--RYPTNVADVARVLKDLAVKKINDKQDIRGIYHFSAKESMTKY 217
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL----VQTLNIDPVTYKDG 310
QM E A I + P + V P + + + +L + T + T+ DG
Sbjct: 218 QMCETFASILNVPMDHLIPQNTVDPSASVSRPDNSHLSVKRLEEAGIDTHFVKFATWFDG 277
Query: 311 VKLTLAA 317
L L+A
Sbjct: 278 -HLKLSA 283
>gi|406996384|gb|EKE14771.1| hypothetical protein ACD_12C00310G0004 [uncultured bacterium]
Length = 290
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%), Gaps = 27/289 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G LG L+ + K Y V AT S P F F + DLK+
Sbjct: 2 KKILITGTSGMLGATLVN----LWNKKYHVYATSGSN------FSNNPAVF-FKEFDLKT 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ L++ +PDV+++CAA++ C+N+P AM +N S+ + F E+K L
Sbjct: 51 -RNYQSL-LQWVKPDVILHCAAITSHEYCQNNPKEAMLVN-GESVKKLIEVFPESK---L 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I +STD V+ E+ + P +YGKSK EK I N ++R++II + I
Sbjct: 105 IFISTDAVFPLNTHLAGEKTKTIPSTIYGKSKELGEKNILNLARNGYVIRTTII--GKNI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S ++WI + L G+ + + + P+ + + + W+ +K + +L
Sbjct: 163 NTRKQSF-VEWIINSLRGGKMINLYDNTLFTPISIWHFAQEL-----EWIINNK-VPKIL 215
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+V G + +S+ + +A+ +LIK D+ ++ D ++D
Sbjct: 216 HVAGDEIISKYTLGYNLAKKLNLDLNLIKKGKLIQKDK-IKRSKDQTLD 263
>gi|326391870|ref|ZP_08213382.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW
200]
gi|325992088|gb|EGD50568.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW
200]
Length = 298
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PDV++NCAA + CE+D D+A +N P +L L+H+STD V+
Sbjct: 63 RPDVIINCAAYTNVDKCESDIDTAFKVNAIGPRNLAIAAQKIGAR----LLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G ++E D P+NVYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGDIPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
+ + KG +E +D+ P D+ IL L L+E+ + + G S
Sbjct: 174 TILKAAKEKG-YLEVVNDQKGNPTNAEDLAHHILKLV---LTEEYG---IYHCTGKGECS 226
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + E G + +++ P+++ +DR + P S+D L T+ + ++D +K
Sbjct: 227 WYDFACKIVEYAGINCTVV-PITSDKIDRPAKRPFYSSLDNMMLRCTIGDEMRNWEDALK 285
>gi|164507700|emb|CAL64846.1| putative 2-epi-5-epi-valiolone dehydratase/epimerase GacO
[Streptomyces glaucescens]
Length = 307
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ +STD V++G + E+ + P N YG++K+AAE+ + + ++ +LR S++YG +
Sbjct: 110 LLLVSTDNVFDGSRPDNSEDTPVCPANAYGRAKLAAERTVLDAAADAVVLRVSLVYGHEP 169
Query: 183 ISPVPKSLPIQWID------SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+W++ L +GE+V D+ PV V DV ++ A+ L
Sbjct: 170 ADAG------KWLNFFAACAHRLLRGEQVTVPEDQWTTPVLVDDVARVTAAV----LFAG 219
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
+ +L++GGPDRVSR A VVAE G L+ PV
Sbjct: 220 GAVPPVLHLGGPDRVSRAAWASVVAEALGAPPHLVVPV 257
>gi|402873332|ref|XP_003900533.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Papio
anubis]
Length = 278
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 68/316 (21%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+L
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLEIALL-------- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
C R+++ IL D ++
Sbjct: 170 -------------------------------CFAGSISRNLILDIL---------DPSIK 189
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL
Sbjct: 190 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETL 247
Query: 301 NIDPVT-YKDGVKLTL 315
I T ++ G+K +L
Sbjct: 248 GIGQRTPFRIGIKESL 263
>gi|325093589|gb|EGC46899.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H88]
Length = 332
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L+ +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L+
Sbjct: 57 -EGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSILI 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++Y
Sbjct: 114 IYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRGCGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLSL 231
Query: 235 --------ED------KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
ED K + +L D +++ Q+ + +AEI G + PV
Sbjct: 232 FVGAAADREDDGGFSFKSLPRILQFSSEDAMTKYQICQTLAEILGLPLPGMMPVKDGPKP 291
Query: 281 RGVQSPADISMDITKLVQTLNID 303
VQ P D + T+ ++ + ID
Sbjct: 292 GEVQRPYDTHLS-TEELRRIGID 313
>gi|302343716|ref|YP_003808245.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075]
gi|301640329|gb|ADK85651.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075]
Length = 315
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+++KR+ ++G G LG+ +L+ +TP L L F ++D
Sbjct: 10 LAQKRIYILGAGGQLGREMLR-----------------ATPPAGLGL----RGFSRQELD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + A A+ +VVNCAA + E+D ++ ++NV V ++ +
Sbjct: 49 VTDPTALMA-AIGAADCALVVNCAAYTAVDKAESDVQASFAVNVGG--VAAMARACDEAA 105
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+ST+ +++G K+ Y E D+ +P+N YG+ K AE+ + ILR+S ++
Sbjct: 106 VPLVHVSTEYIFDGRKNGPYVEADQPSPLNAYGQGKAEAERHVRLLAKRHVILRTSWLFS 165
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ V + I + E++ D+ CP RD+ + I+ + + L+ +
Sbjct: 166 AHGHNFV------KTILRLAQSHERLRVVVDQIGCPTPARDMAEAIMHIAGQLLAGKQDG 219
Query: 240 QLLLNVGGPDRVSRVQMAE-VVAEIRGY--STSLIKPVSASSVDRGVQSPADISMDITKL 296
+ G VSR++ A +V + R + T I P S S+ PA+ +D K+
Sbjct: 220 FGTFHYCGAGPVSRLEFARAIVEQARPHLGETPEIAPTSQSAFPTPAARPANCVLDCAKI 279
Query: 297 VQTLNIDPVTYKDGV 311
V+ + +++ G+
Sbjct: 280 VKAYGLAQKSWEPGL 294
>gi|402772656|ref|YP_006592193.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
gi|401774676|emb|CCJ07542.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
Length = 310
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R V+GG+G +G L++ LS + + A+ P+ + + + D+
Sbjct: 8 RYCVIGGSGAIGSALMKSLS---AQRKEAIASTRRQPVDR-------QNEFYLDL----- 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G D L F DVV+ A+++ C ++P+ A +NV + ++ ++ K ++
Sbjct: 53 -GADLPELSFSARDVVILTASMTRLAECRSEPERARRVNVDAQVL--IAEQAVKKGAFVV 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LST+QV++G KS E+ +P +VYGK K AE + + AI+R S + GP
Sbjct: 110 FLSTNQVFDGTKSGVGPEEPRSPRSVYGKLKAEAESALSRLGDSVAIVRLSKVVGPHL-- 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
L +W LS+GE +E F D P+ + VV + + R L + +
Sbjct: 168 ----DLFQRWRRE-LSRGETIEAFDDLLLAPIAMAKVVAGVELIGLRRLGG------VWH 216
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISM 291
+GG D +S +Q +A G L+ VSA+ V+ P +SM
Sbjct: 217 LGGSDEISYLQAGRHLACRLGADARLVVSVSAAKAGIPVEERPPRVSM 264
>gi|240277510|gb|EER41018.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H143]
Length = 332
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L+ +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L+
Sbjct: 57 -EGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSILI 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE---KCSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E +C +LR ++Y
Sbjct: 114 IYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRECGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLSL 231
Query: 235 --------ED------KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
ED K + +L D +++ Q+ + +AEI G + PV
Sbjct: 232 FVGAAADREDDGGFSFKSLPRILQFSSEDAMTKYQICQTLAEILGLPLPGMMPVKDGPKP 291
Query: 281 RGVQSPADISMDITKLVQTLNID 303
VQ P D + T+ ++ + ID
Sbjct: 292 GEVQRPYDTHLS-TEELRRIGID 313
>gi|108763033|ref|YP_632780.1| dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622]
gi|108466913|gb|ABF92098.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK
1622]
Length = 300
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ P+VV++CA+++ CE DP++A + NV ++ S+ L+H+ST
Sbjct: 55 AAAVETAAPEVVIHCASMTEVDACEKDPEAAYAGNVTAAAAVARSARKAGAH--LVHVST 112
Query: 129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
D V++G Y E+ P VY +K E+ AI R++++YG PV
Sbjct: 113 DYVFDGEAGPYSEDAIPNPRGVYSVTKHMGEQAARMLAPGCAIARTAVVYG---WPPVEG 169
Query: 189 SLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L W+ + L KG++V F D+ P + +V +++ L R L + N G
Sbjct: 170 RLNFGAWLVTALEKGQQVRLFEDQIVSPSFADNVAAMLVELGTRRLGG------VWNTCG 223
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTY 307
+ RV + E+ G+ LI P + + P + K+ L++ P+
Sbjct: 224 GTVIDRVGFGRALCEVFGFDAKLIVPTRMAELKLASPRPLKSGLRTDKVRAELSVPPLAL 283
Query: 308 KD 309
+
Sbjct: 284 AE 285
>gi|119357789|ref|YP_912433.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM
266]
gi|119355138|gb|ABL66009.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM
266]
Length = 290
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GG G LG L + P LP D+D+ +
Sbjct: 3 ILVTGGNGQLGSEL--------------RSLQRDYPAWMFCFCDLP------DLDITDSN 42
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DA+ ++ + +V+VNCAA + E +P A +N + V L++ + LLIH
Sbjct: 43 AVDAL-MRTCKCNVIVNCAAYTAVDQAEQEPGRAYRVNRDGAGV--LAACAKAHHALLIH 99
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G Y+E D AP+ +YGKSK AAE+ I+E +F ILR+S +Y +
Sbjct: 100 ISTDYVFDGNSCLPYRETDRPAPLGIYGKSKRAAEELIFEIAPSFLILRTSWLYSLYGHN 159
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ L + ++ + ++ D+ P Y D+ + I+ + +
Sbjct: 160 FLKTMLRLG------AEKDVIKVIFDQTGTPTYAGDLARAIMTILGK 200
>gi|367024813|ref|XP_003661691.1| hypothetical protein MYCTH_2314646 [Myceliophthora thermophila ATCC
42464]
gi|347008959|gb|AEO56446.1| hypothetical protein MYCTH_2314646 [Myceliophthora thermophila ATCC
42464]
Length = 319
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 31/320 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS K L+ G TG+LG+ +++ A H T A VD
Sbjct: 1 MSGKVALITGATGFLGRQVVKAF-----------AFHDWTAKGTGFSRA--DGVNILKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + A++ +P VV++CAA P + DP +N+ +S L+ ++
Sbjct: 48 LANSAEIEN-AIEEVKPQVVIHCAANRYPDKVDKDPSGTRVLNIEASRT--LAQHCARRD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LLI++STD V+ G ++ Y+ + P N+YG++K+ E + + +L
Sbjct: 105 ILLIYISTDYVFPGRPGEAPYEADAATGPTNLYGQTKLDGEGAVLGAFRDAGKDGLGVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALT 229
R ++YG +S +D VL KG K V+ H R P DV ++ +
Sbjct: 165 RVPVLYGEVEGGRNEESAVNCLMDVVLGKGGKTGQVKMDHWAIRYPTNTEDVARVCYDVA 224
Query: 230 NRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSP 286
R+L E + L +L D+ ++ ++ ++ EI G I P + + VQ P
Sbjct: 225 VRYLGEADKASLPRVLQFSSEDKYTKYEICQLFGEIMGVPIDRIVPNTEGNDPNSSVQRP 284
Query: 287 ADISMDITKLVQTLNIDPVT 306
D + TK ++ L ID T
Sbjct: 285 YDCHLS-TKALKELGIDVST 303
>gi|402701557|ref|ZP_10849536.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fragi A22]
Length = 289
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
QPD+++N AA + + E++P+ A +IN + V F E L LIH STD V+
Sbjct: 50 QPDLIINAAAHTAVDLAESEPELAFAINGIAPGV-----FAEEAAALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E+D P+ VYGKSK+A E+ I ++ ILR+S +Y S K+
Sbjct: 105 DGNKPAPYTEDDVPNPLGVYGKSKLAGEQAIAATGADCLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + + L RW + + + ++
Sbjct: 160 LT-MQRLLQERPELRVVADQVGAPTWAGTIARSTRLLIERWQAAEAGAWGIYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S + +AE +G + ++P+ AS+ P + +D ++L + ++ ++
Sbjct: 219 SWFGFTQAIAEHLSAQGKPCATLEPIPASAYPTPAARPQNSRLDCSRLEREWHVAQPAWQ 278
Query: 309 DGVKLTLAAE 318
+ ++ LAA+
Sbjct: 279 NALRECLAAQ 288
>gi|196005271|ref|XP_002112502.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens]
gi|190584543|gb|EDV24612.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens]
Length = 298
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 30/318 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---VD 60
K+VL+ G +G LG+ + + +D AT L +S D VD
Sbjct: 2 KKVLITGASGLLGRAI--------KREFDNDATWKVL--------GLAYSRAGGDLRRVD 45
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + V +F QPDV+V+ AA P + + D A +NV S L + T N
Sbjct: 46 LSDVNAVKEVVREF-QPDVIVHAAAERRPDIVDKKTDVARQLNVDVSRNLALIAKTFN-- 102
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYG 179
++++STD V++G Y+ D+ AP+N YG K EK + E ILR I+YG
Sbjct: 103 CFILYVSTDYVFDGCNPPYQPADQPAPLNTYGMLKWQGEKAVLETYPKRSGILRLPILYG 162
Query: 180 P-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ + ++ ++ I + GE ++ E R P YV DV +I ++++ L +D+
Sbjct: 163 EVEYLEESAVTVLLKAIQNGNKPGEMSDY---EKRYPTYVGDVAVVIRQISDKTL-QDEN 218
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + G + +++ QMA +A + ++ V+ + G + P + +DI+ L Q
Sbjct: 219 FYGIWHWSGLEELTKYQMALKIA--KAFNIDYKHLVAVNKPSPGAKRPYNSHLDISTLTQ 276
Query: 299 TLNIDPVTYKDGVKLTLA 316
+++DG+ ++L+
Sbjct: 277 LNFGQQTSFQDGIMISLS 294
>gi|222148464|ref|YP_002549421.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
gi|221735452|gb|ACM36415.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
Length = 301
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 36/306 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR LV G G + Q LL+ S+ K D+ A PQL DL
Sbjct: 5 KRYLVTGLAGQVVQSLLEKASD--RKDIDLVALGR----PQL--------------DLAD 44
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A A++ +PD++++ AA + E D +A ++N L+ + + +
Sbjct: 45 AATIEA-AVRAAKPDLIISAAAYTAVDQAETDEAAAFAVNGEGP--GELARVAKALDIPI 101
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K S Y E D +AP+ VYG+SK+ E+ + + N AILR++ +Y
Sbjct: 102 IHISTDYVFDGSKASPYNEADPVAPLGVYGRSKLEGERRVAAETDNHAILRTAWVY---- 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-SEDKQMQL 241
SP K+ + + ++ E + D+ P D+ +L + + L S+ ++
Sbjct: 158 -SPFGKNFLLTMLRLAETRDE-LGVVADQIGNPTSALDIADAVLKVADNLLSSKAADLRG 215
Query: 242 LLNVGGPDRVSRVQMA----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
++ G S + A + AE G S + P+ AS+ + PA+ +D KL
Sbjct: 216 TFHMTGTGEASWAEFATEIFRLSAEQNGPSAK-VNPIPASAYPTPAKRPANSRLDCAKLA 274
Query: 298 QTLNID 303
+ ID
Sbjct: 275 RVHAID 280
>gi|357635788|ref|ZP_09133665.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B]
gi|357580628|gb|EHJ45962.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B]
Length = 321
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 33/311 (10%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+++R+LV G +G LG ++ L + ++V T+ + P V +D+
Sbjct: 3 ARRRLLVTGASGLLGGNVALALC----RDWEVVGTYAAHPFSL-------AGTVSRRLDI 51
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+S VA F +P+V V+CAA + CE PD A ++N + ++
Sbjct: 52 RSDG---EVAALFADIRPEVTVHCAAETRVDACEARPDEAFAVNARAPGRLARAARAAG- 107
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+L +H+STD VY + + E PVN Y SK+A E+ + E I+R+++
Sbjct: 108 -SLFVHVSTDAVYAPGGAPHAESAPTGPVNAYAASKLAGEEAVAEAGGECLIVRTNLF-- 164
Query: 180 PQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
S K +W + L + GE + F D P+ D+ + I AL
Sbjct: 165 --GWSGRAKRSLAEWALARLEAGGEPLTGFTDAVFSPLLASDLARAIEALVR------AG 216
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK--- 295
+ + N G D VS+ ++ GY L++P S + P D S+D ++
Sbjct: 217 ARGVYNAGAADAVSKYAFLRLLCREFGYPEDLVRP-GRSGQTLAARRPGDTSLDSSRAAA 275
Query: 296 LVQTLNIDPVT 306
L+ T PV
Sbjct: 276 LIGTSFFPPVA 286
>gi|289577888|ref|YP_003476515.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9]
gi|289527601|gb|ADD01953.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9]
Length = 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 20/240 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D D+A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDKCESDVDTAFKVNAIGPRNL----AIAAQRVGAKLLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G + ++E D P+NVYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGNVPFREYDVPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
+ + KG +E +D+ P D+ IL L L+E+ + + G S
Sbjct: 174 SILKAAKEKG-YLEVVNDQKGNPTNAEDLAHHILKLI---LTEEYG---IYHCTGKGECS 226
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + E G + +++ P+++ ++R + P S+D L T+ + +KD +K
Sbjct: 227 WYDFACKIVEYAGINCTVV-PITSDKINRPAKRPFYSSLDNMMLRCTVGDEMRNWKDALK 285
>gi|300710893|ref|YP_003736707.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|448297014|ref|ZP_21487064.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|299124576|gb|ADJ14915.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|445580691|gb|ELY35069.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
Length = 283
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 28/295 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV G +G LG+ LL + E V T+++TP+ H V DV + G
Sbjct: 4 LLVTGASGLLGRCLL----DAEWSGGRVVGTYYTTPIES------GHETVHLDV--RDGE 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENLL 123
+ + PDVV++ AA + CE+DP A N + +V+ ++ +
Sbjct: 52 AVARLVERV-DPDVVIHSAAATSVEACEDDPKLAHGTNARGTKHVVDAATAVGAR----V 106
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I+ ST V+ + E+DE AP+N YG+SK+ E+++ I+R ++ +
Sbjct: 107 IYPSTAYVFGDGGPVHAEDDEPAPMNRYGRSKLDGERYVQAASPENTIVRFCVVV---NL 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P W+ L GE+V D+ P + D + + L + + +
Sbjct: 164 GPADSPDFGSWVRGRLESGERVRLIDDQEITPTVLSDAIDALGYLV------EHETAGVF 217
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+V PDR++R ++ +A G L++ + + +D P + + KL Q
Sbjct: 218 HVASPDRLTRYELGVEIARRHGLDPDLLEAIPIAEMDWQAPRPDHLCLGAEKLSQ 272
>gi|424874697|ref|ZP_18298359.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393170398|gb|EJC70445.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 295
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ E +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAV--AAAAARIEAPVIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ +R +++ + ++ +
Sbjct: 155 --FGTNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVADPEPSLRGIF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ E+ G T ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFTELSKSGGRTVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|374327411|ref|YP_005085611.1| dTDP-4-dehydrorhamnose reductase [Pyrobaculum sp. 1860]
gi|356642680|gb|AET33359.1| dTDP-4-dehydrorhamnose reductase [Pyrobaculum sp. 1860]
Length = 292
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD VV+ AAL CE +P A+ V + ++ + + L++LSTD V+ G +
Sbjct: 56 PDAVVHAAALGDVDRCEVEP--ALCYRVNAVTTREIARWCSKRGAALVYLSTDYVFPGDR 113
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+EED PVN YG +K+ E+ + A++R + IYG P ++ ++
Sbjct: 114 GSYREEDPPRPVNYYGLTKLLGEEAA--LAAGGAVVRVAWIYG---FGPGRQNFGRTVVE 168
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
LS+GE+V D+ P + +++ + +K + +L+ GP R+SR +
Sbjct: 169 K-LSRGEEVRAVVDQWGSPTLNTLIAEVVAKVL------EKSISGILHAAGP-RLSRYEF 220
Query: 257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A +AE G+S L+KP+ A+ + P D S+D + V TL +
Sbjct: 221 ALAIAEAFGFSKELVKPIKAADLSFKAPRPRDSSLDSSLAVSTLGV 266
>gi|333991657|ref|YP_004524271.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium sp.
JDM601]
gi|333487625|gb|AEF37017.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium sp.
JDM601]
Length = 289
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 121/289 (41%), Gaps = 39/289 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+++ G G LG+ L G + G+ DV A + D+
Sbjct: 5 QRIVITGARGQLGR-FLTGRAAEAGR--DVLALSSAQ------------------CDITD 43
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
DAV L+ G D++VNCAA + E DP+ A ++N L++ L
Sbjct: 44 PGAVDAVDLRAG--DLLVNCAAYTAVDAAETDPERAHAVNAAGP--GHLAAACARAGARL 99
Query: 124 IHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V++G Y+ D P++VYG +K+A EK + + ++R++ +Y
Sbjct: 100 IHISTDYVFDGDFGGAPPRPYEPGDPTRPLSVYGDTKLAGEKAVLAGSPDALVVRTAWVY 159
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
V S + + + E VE D+ P YV D+ +L L W
Sbjct: 160 ----TGAVGGSDFVAVMRARAEADETVEVVDDQIGSPTYVGDLADALLRLAEAW-----P 210
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
LL+ SR + A V G ++PVS+++ R PA
Sbjct: 211 AARLLHAANAGAASRYEQARAVFTALGADADRVRPVSSTANPRPAARPA 259
>gi|229587852|ref|YP_002869971.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
SBW25]
gi|229359718|emb|CAY46566.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
SBW25]
Length = 289
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +PD+++N AA + E++PD+A +IN + V E + L LIH ST
Sbjct: 46 IRAHRPDLIINAAAHTAVDQAESEPDAAFAINAIAPGV-----LAEEAKALGIPLIHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D P+ VYG+SK+A E+ I ++ ILR+S +Y S
Sbjct: 101 DYVFDGSKPDPYTEADTPNPLGVYGQSKLAGEEAIAAVGGDYLILRTSWVY-----SSHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
K+ + + +L + ++ D+ P + + + AL RW + + + ++
Sbjct: 156 KNFLLT-MQRLLQEKPQMRIVADQIGAPTWAGSIARSTRALIERWQAGEPGEWGIYHLTN 214
Query: 248 PDRVSRVQMAEVV-AEIR--GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
S AE + A +R G + + ++ + +S+ + P + +D ++L Q ++
Sbjct: 215 QGETSWFGFAEAIGAHLRTQGKACAELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQ 274
Query: 305 VTYKDGVKLTLA 316
+++D ++ LA
Sbjct: 275 PSWQDALRECLA 286
>gi|408388384|gb|EKJ68070.1| hypothetical protein FPSE_11881 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 31/317 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ + VLV G TG LG+ + K ++V T S F VD
Sbjct: 1 MTDRTVLVTGATGLLGREVSAAFGL---KNWEVKGTGFSRA----------DGISTFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + L +P V+V+CAA P + DP+ A ++NV +S L+ ++
Sbjct: 48 LGNENEV-STFLDETKPQVIVHCAAQRFPDKVDKDPEGARALNVAASKA--LAKLAAERD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ GV + Y+ + E P N+YG++K+ E+ + E +L
Sbjct: 105 IFVIYISTDYVFPGVPGDAPYEADAEPQPTNLYGQTKLDGERAVLETFKEAGKEGLGVVL 164
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G ++ H R P D+ ++ ++ +
Sbjct: 165 RVPVLYGNAETPSESAVNVLMDALWKAQTQGAQISMDHWAIRYPTNTEDIGRVCHDISVK 224
Query: 232 WL---SEDK-QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSP 286
+L S D+ + +L DR+++ ++ + EI G ST I P + + VQ P
Sbjct: 225 YLDTSSNDRASLPSILQFSSEDRMTKYEIVALFGEIMGLSTEGITPNTEGNDPNASVQRP 284
Query: 287 ADISMDITKLVQTLNID 303
D + TK ++ L ID
Sbjct: 285 YDCHLS-TKALKDLGID 300
>gi|387906721|ref|YP_006337058.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. KJ006]
gi|387581613|gb|AFJ90327.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. KJ006]
Length = 314
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 41/335 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ +L++G +G LG+ + LS E VA ++ + P DV
Sbjct: 1 MSQPTILLIGASGLLGRAVAAALSR-EASLTLVATIRNADTAGARRVALPPEHTARLDV- 58
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCENDP +A +INV + + +
Sbjct: 59 ------LDQPALERLFDARRPSAVIVCAAERRPDVCENDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPL 170
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSK------------GEKVEFFHDECRCPVYVRDVVKI 224
+YGP + W +S ++ E R P Y DV ++
Sbjct: 171 LYGPI----------VDWRESAVTSLVPAIVAAAQPGAEPARMDAWAIRYPTYTPDVAQV 220
Query: 225 ILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ 284
I LT R L+ + + + + +++ +A+ +A G+ +L P+ A +
Sbjct: 221 IRDLTLRHLA-GAPVTGIRHWSAEEPMTKYDIAQRLAAALGHRAAL-APIHAPT--DATP 276
Query: 285 SPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEA 319
P D +D ++ V+ L ID T D L + A+A
Sbjct: 277 RPYDCHLDASR-VRALGIDHATPFDAGLLAVLADA 310
>gi|159041989|ref|YP_001541241.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167]
gi|157920824|gb|ABW02251.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167]
Length = 288
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+VV++ AA+ CE+ PD +NV +S + ++ + +LSTD V++G
Sbjct: 59 KPNVVIHTAAVGNVDQCEDQPDLCYRVNVETSRILLREAYRVGSA--IYYLSTDYVFDGE 116
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y E+D P+N YG SK+ AE+ + +I+R + +YG P + +
Sbjct: 117 RGLYNEDDAPRPINYYGLSKLLAEEI--TRALGGSIIRVAWVYG---TGPGRVNFGRTVV 171
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+ LS+GE V D+ P + + +L L + + +L+V GP R+SR
Sbjct: 172 EK-LSRGEVVNAIIDQWSSPTLNTIIGEAMLRLV------ESRFTGVLHVTGP-RMSRFD 223
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A+ +A ++ L+KP+ S V+ + P D S+ + + LNI
Sbjct: 224 FAKAIARYFKFNEDLVKPIRLSDVNYKARRPRDSSLSNKRALGILNI 270
>gi|291295470|ref|YP_003506868.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279]
gi|290470429|gb|ADD27848.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279]
Length = 283
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 142/296 (47%), Gaps = 33/296 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V GGTGYLG LL+ S G+P+ + A++ S P A+P + +D++
Sbjct: 2 RVFVTGGTGYLGSTLLRLGS---GRPWVLGASYWSQP------PAVP-GVAWVRLDVRDA 51
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + ALK +P+VV++ A + P + +I V ++ ++ LI
Sbjct: 52 AAVEQ-ALKEFRPEVVIHTA------YSKASPAALEAITVQGTVH--VARACRALGARLI 102
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
HLSTDQ+++G Y E P+ YG++K+ AE ++ I+R+S+I+G +
Sbjct: 103 HLSTDQLFDGENPPYAESAAPNPLTEYGQAKLRAEHWVQAILPTATIVRTSLIWGLNPLD 162
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V + ++ D G F DE R VYV D+ + + L +L+
Sbjct: 163 -VTSQMVLELADGKREGG----LFSDEYRSFVYVEDLAQALGELVG------LDYAGILH 211
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+GG + +SR++ ++A G + + P + G++ P + ++D + L Q+L
Sbjct: 212 LGGAEVLSRLEFGRLIAPFHGRDPARL-PAQRRAEFPGLR-PGNCALD-SSLAQSL 264
>gi|392544063|ref|ZP_10291200.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas piscicida JCM
20779]
Length = 289
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 34/296 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+V++ G TG LG+ L Q LS EI G + AA PL +L D H+ V +D
Sbjct: 3 KVMITGATGLLGRALCQELSSTHEILGCGFSRAAA----PLHKL--DLADHNSVLDFLDN 56
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S P+V+++ AA P CE D + +++NV ++ +L+ ++
Sbjct: 57 HS-------------PEVLIHAAAERRPEQCERDQAATLALNVAAT--EFLAQACRERDI 101
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+STD V++G + Y E D PVN YG++K AAE+ I + I+R ++YG
Sbjct: 102 RFFFISTDYVFDGTSAPYVETDITNPVNFYGQTKQAAERAILADSALHTIVRVPVLYGE- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + I L H R P +V D+ ALT + + +
Sbjct: 161 -VKTLEES-AVTVIAKQLLANPASSHDHWAIRYPTHVNDI-----ALTLKDVIAQPSLSG 213
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
++++ G +++ +MA V+++ T + P++ S D P + ++ T+L+
Sbjct: 214 IIHISGNQALTKYEMALVMSQALQLPTQDLVPLNQPSDD--ATRPQNCALKDTRLI 267
>gi|221039802|dbj|BAH11664.1| unnamed protein product [Homo sapiens]
Length = 228
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 25 FIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--E 82
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 83 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 141
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G +++++ +MA +A+ +S ++P++ S V G Q P + +D +KL +TL I
Sbjct: 142 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPV-LGAQRPRNAQLDCSKL-ETLGI 199
Query: 303 DPVT-YKDGVKLTL 315
T ++ G+K +L
Sbjct: 200 GQRTPFRIGIKESL 213
>gi|448729950|ref|ZP_21712262.1| dTDP-4-dehydrorhamnose reductase [Halococcus saccharolyticus DSM
5350]
gi|445794271|gb|EMA44824.1| dTDP-4-dehydrorhamnose reductase [Halococcus saccharolyticus DSM
5350]
Length = 304
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 24/294 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G +G +++ E + V T+ S P P L + S D+ +
Sbjct: 3 LLVLGAGGLVGSNVVTAAVARE---WSVTGTYRSEP-PTLDV-----SLTELDIRNRKRV 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ PD VVNCAAL+ CE +PD A ++N + L++ E +H
Sbjct: 54 ---RSVVRRTSPDAVVNCAALTDVDACEREPDRARTVNADAP--GALAAVCEEDAIPFVH 108
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G + Y E P+ YG+SK+A E+ + + ++R S +YG +
Sbjct: 109 LSTDYVFDGRADTRYDESATPNPIQEYGRSKLAGEQAVRRQHDTPLVVRLSFVYGIGRAN 168
Query: 185 P--VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
P V P W+ L GE V F D+ P K +L L ++
Sbjct: 169 PPGVVAGFP-AWVRDRLHAGESVPLFTDQRVTPTRAGQAAKTVLDLLR------ERCTGT 221
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+V V+ + + E +L++ S ++VDR P +D+ ++
Sbjct: 222 YHVACRSCVTPYEFGVAIRERVDAPATLLERSSITAVDRPASRPRQTCLDVGEI 275
>gi|383456789|ref|YP_005370778.1| dTDP-4-dehydrorhamnose reductase [Corallococcus coralloides DSM
2259]
gi|380734405|gb|AFE10407.1| dTDP-4-dehydrorhamnose reductase [Corallococcus coralloides DSM
2259]
Length = 299
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 13/238 (5%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A+ +P+ +++ A+++ CE DPD+A + NV ++ ++ L+H+ST
Sbjct: 55 AAAIAQARPEAIIHPASMTEVDACEKDPDAAYAANVHATAAVARAAKLAGAH--LVHVST 112
Query: 129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-PQTISPVP 187
D V++G Y E+ P VY +K AE+ AI R++++YG P P
Sbjct: 113 DYVFDGDAGPYSEDALPNPRGVYALTKHMAEQAARVFAPGCAIARTAVVYGWPAAGRPNF 172
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
+ W+ L KG+ V+ F D+ P + V +++ L R L + N G
Sbjct: 173 GA----WLVGALEKGQPVKLFEDQVVSPSFADSVAAMLVELGERRLGG------VWNTCG 222
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
+ RV + E+ G+ SLI P + + P + K+ L P+
Sbjct: 223 GTVIDRVGFGRALCEVFGFDASLITPTRMADLKLASPRPLRSGLKTDKVRTELKAQPL 280
>gi|397775667|ref|YP_006543213.1| dTDP-4-dehydrorhamnose reductase [Natrinema sp. J7-2]
gi|397684760|gb|AFO59137.1| dTDP-4-dehydrorhamnose reductase [Natrinema sp. J7-2]
Length = 303
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST-PLPQLLLDALPHSFVFFDVDLKSG 64
VLV GG+G +G L++ L ++V T+H+ PL ++ ++A P F VD++
Sbjct: 3 VLVTGGSGLIGWDLIRRLL---SDGHEVTYTYHTNVPLSRINVNAKP-----FRVDIRDE 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V + P+VVV+ AA++ CE P A +NV + + E ++
Sbjct: 55 QRVTEV-ISRSDPEVVVHAAAMTDVDECERTPAKAEEVNVKGTRN--VVKACEEIGATVV 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
ST V++ E+ + VN YG++K+ AE + + I R Y +
Sbjct: 112 FFSTSFVFDSDGDRVTEDSQRRAVNYYGRTKIKAEDLVSNAPFDSIICRIDQPYCWSEMW 171
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P + W+ G F D PVYV D ++AL + + +
Sbjct: 172 QTPTF--VTWVLDRCVDGTPFPVFSDWHNTPVYVPDCNDALIALL------EAGKTGVFH 223
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ GPD VSR + A+ +A + GY LI+ S+S D P+ +++ + QTL++
Sbjct: 224 LSGPDYVSRDEWAKEIAWMFGYDPGLIETSSSSDADLPAARPS-VNLQNKAICQTLDV 280
>gi|320040797|gb|EFW22730.1| NAD dependent epimerase/dehydratase [Coccidioides posadasii str.
Silveira]
Length = 315
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 37/323 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS-----EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
++ LV G +G LG+ +L E G+ + AA H
Sbjct: 3 QKALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPH-----------------IVK 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL + S +++ + +P VVV+CAA P C+ PD A +NV ++ L+ T
Sbjct: 46 ADLTNPSEIESLLAEV-KPQVVVHCAANRFPDQCDAHPDLARKVNVEATKA--LAKATLQ 102
Query: 119 KENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILR 173
+ LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E +LR
Sbjct: 103 RSILLIYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLR 162
Query: 174 SSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG T S ++ I + + KV+ R P DV ++ + ++
Sbjct: 163 VPVLYGSADTNSESAVNVLIDAVWKAQAADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKY 222
Query: 233 LSEDKQ---MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV-SASSVDRGVQSPAD 288
L E ++ +L D+V++ +M E AEI G S ++ + + GVQ P D
Sbjct: 223 LGEQERAASFPTILQFSSEDKVTKYEMCERFAEILGLPLSGMERIKQGGTPGNGVQRPFD 282
Query: 289 ISMDITKLVQTLNIDPVTYKDGV 311
+ TK ++ L I PV +D V
Sbjct: 283 THLS-TKALKELGI-PVDTQDFV 303
>gi|410914824|ref|XP_003970887.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Takifugu rubripes]
Length = 311
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 147/309 (47%), Gaps = 24/309 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G TG LG+ + + E + + V +L L D ++
Sbjct: 6 KVLVTGATGLLGRAVCR---EFQNNSWAVLGIGFRRARSGILRCDL--------TDEEAV 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G L+ +PDV+++CAA P V E ++A+++NV ++ + L+ +
Sbjct: 55 RGL----LQDYKPDVIIHCAAERRPDVVERHTEAAVNLNVHTT--STLAKEAAACGAFFL 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-QTI 183
++STD V++G Y E+D P+NVYG+SK+ E+ CS +LR +++G +T+
Sbjct: 109 YISTDYVFDGRNPPYGEDDAPNPLNVYGRSKLEGERETLRHCSGAVVLRVPVLFGEVETV 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S ++ W+ V E H + R P RDV + L+ R +D ++ +
Sbjct: 169 S--ESAVTCLWL-RVQEATEGSTLDHCQQRFPTDTRDVAAVCRKLSER-ARQDPSIRGIF 224
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL-VQTLNI 302
+ +++++ +MA +A+ ++ + P++ ++ P + ++ ++L + L++
Sbjct: 225 HFSAKEQMTKYEMAIAIAQAFNLPSNHLIPLTEQPAASTLR-PLNSQLNCSRLELLNLSV 283
Query: 303 DPVTYKDGV 311
+P + +
Sbjct: 284 EPRPFTSAI 292
>gi|118588018|ref|ZP_01545428.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614]
gi|118439640|gb|EAV46271.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614]
Length = 296
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 16/229 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+++N AA + E D +A ++N L+ + ++LIH STD V++G +
Sbjct: 53 PDLIINTAAYTAVDRAETDSQAAFAVNRDGP--RNLAEAAQKHGSVLIHFSTDYVFDGSQ 110
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E+DE+ P+ VYG+SK A E I ILR+S +YG + V L +
Sbjct: 111 PHAYVEQDEVGPIGVYGESKEAGEAAIRAVTERHLILRTSWVYGVHGANFVRTMLRL--- 167
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL--LNVGGPDRVSR 253
+ + +D+ CP Y D+ +++L L R L+ Q + G +V+
Sbjct: 168 ---AQERAHIRVVNDQSGCPTYAADLAEVVLRLAERVLNGQLQQDGYGTFHCAGQGQVTW 224
Query: 254 VQMAEVVAEIRGYSTSLIKP----VSASSVDRGVQSPADISMDITKLVQ 298
A+ + ++ G KP + S + PA+ ++D +KL +
Sbjct: 225 HGFADKIFQLAGERFGK-KPELIAIPGSEFPSRARRPANSALDCSKLAR 272
>gi|85103557|ref|XP_961543.1| hypothetical protein NCU01177 [Neurospora crassa OR74A]
gi|18376291|emb|CAD21404.1| related to methionine adenosyltransferase regulatory beta subunit
[Neurospora crassa]
gi|28923090|gb|EAA32307.1| hypothetical protein NCU01177 [Neurospora crassa OR74A]
Length = 338
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 38/324 (11%)
Query: 4 KRVLVVGGTGYLGQHL---LQGLS---EIEGKP---YDVAATHHSTPLPQLLLDALPHSF 54
K LV G TG LG+ + QGLS E+ K ++V T S
Sbjct: 10 KTALVTGATGLLGRQVVRAFQGLSVPTEVSSKAGWTWEVKGTGFSRA----------DGV 59
Query: 55 VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
VDL+ + V L P V+V+CAA P + DP+ +NV ++ L+
Sbjct: 60 NVLKVDLEKAEEVERV-LGDVSPQVLVHCAANRFPDKVDADPEGTRLLNVEATRT--LAR 116
Query: 115 FTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-- 170
++ LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S +
Sbjct: 117 ACASRGILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKASKE 176
Query: 171 ----ILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKI 224
++R ++YG +S +D+VL +G+KV+ H R P DV ++
Sbjct: 177 GLGVVMRVPVLYGKTEEGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRV 236
Query: 225 ILALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSV 279
+ ++LS E + +L G ++ ++ +M ++ AEI G I+ +
Sbjct: 237 CRDVAVKYLSTSEAERTSLPRILQFSGEEQYTKYEMCQLFAEILGVPVDNIEANTEGNDP 296
Query: 280 DRGVQSPADISMDITKLVQTLNID 303
+ VQ P D + TK ++ L ID
Sbjct: 297 NASVQRPYDCHLS-TKALKDLGID 319
>gi|283779730|ref|YP_003370485.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068]
gi|283438183|gb|ADB16625.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068]
Length = 346
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF 138
V+NC + CE DP A +N+ +S+ N L + L+HLS D V+ GV
Sbjct: 75 AVLNCEGTCKLKSCELDPSMARRVNI-TSVENLLRAM-RGTSTRLVHLSIDLVFSGVGPG 132
Query: 139 YKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
ED PV +YG + AE+ I S ILR S+ P +S + I WI S
Sbjct: 133 NIREDATPDPVTIYGSTMAEAEQLILTDKSEATILRISL---PMGVSFNGHAGAIDWIQS 189
Query: 198 VLSKGEKVEFFHDECRCPVY---VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
K + DE R P Y + +++ +LA +++ L + GG R+S
Sbjct: 190 RFKKHRPATLYFDELRTPTYTDCLNPLLEEVLA---------RELPGLYHAGGTRRLSLY 240
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP--ADISMDITKLVQTLNIDP 304
++A++V + GY+ + + ++ G P D++MD +KL L P
Sbjct: 241 EIAQIVNRVGGYAPEHL--MGCMRLEAGPIPPRAGDVTMDSSKLTAALGHQP 290
>gi|379710544|ref|YP_005265749.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Nocardia cyriacigeorgica GUH-2]
gi|374848043|emb|CCF65115.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Nocardia cyriacigeorgica GUH-2]
Length = 293
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+F ++D+ AV G DVV+NCAA + E++P +A + N V
Sbjct: 40 RAFGHRELDITDAGAVRAV---VGPGDVVINCAAFTNVDAAESEPAAAFAANETGPAV-- 94
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L++ LIH+STD V++G + Y+ D AP++VYG+SK+A E+ + E +
Sbjct: 95 LAAVCAEAGARLIHISTDYVFDGTATRPYETSDRTAPLSVYGQSKLAGEQAVLESEAQAH 154
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLS-KGEK--VEFFHDECRCPVYVRDVVKIILA 227
++R+S ++ ++ ++ ++L +GE+ ++ D+ CP Y D LA
Sbjct: 155 VVRTSWVF---------RAAGGDFVATMLKLEGERDTIDVVDDQLSCPTYGGD-----LA 200
Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
L L+ Q LL+ SR +A V G ++P +S R + PA
Sbjct: 201 LGLLELAHTPQAPRLLHATNSGTASRFDLARAVFAGAGADPQRVRPCDSSKFPRPARRPA 260
>gi|345017161|ref|YP_004819514.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032504|gb|AEM78230.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 298
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%), Gaps = 20/240 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D +A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDKCESDIGTAFKVNAIGPRNL----AMAAQRVGAKLLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
GV + ++E D P+NVYGK+K+ E+++ E C+ + I+R++ +YG ++
Sbjct: 119 GVGNVPFREYDIPEPINVYGKTKLLGEQYVREFCNRYFIVRTAWLYG-----KYGRNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
+ + KG +E +D+ P D+ IL L L+E+ + + G S
Sbjct: 174 TILKAAKEKG-YLEVVNDQKGNPTNAEDLAHHILKLV---LTEEYG---IYHCTGNGECS 226
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + E G +++ P+++ +DR + P S+D L T+ +KD +K
Sbjct: 227 WYDFACKIVEYAGIDCTVV-PITSDKIDRPAKRPFYSSLDNMMLRCTIGDKMRNWKDALK 285
>gi|121719189|ref|XP_001276315.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
clavatus NRRL 1]
gi|119404513|gb|EAW14889.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
clavatus NRRL 1]
Length = 314
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 31/310 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G TG LG+ + V +S P +L A DL+
Sbjct: 5 VLITGATGLLGRQVFNTFKH---SGCFVVGQGYSRANPPTILKA----------DLEKDG 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +P+ A +NV ++ + L+ +++ L+I+
Sbjct: 52 DIRNL-LDEAKPQIVIHCAANRSPDLCDKNPEEARGVNVEATRI--LAEEASSRKALMIY 108
Query: 126 LSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G + Y+ + E P N+YG+ K E + E ILR ++YG
Sbjct: 109 ISTDYVFSGKEGEAPYEADAESHPTNLYGQLKRDGELAVLEATKETGLGVILRVPVLYG- 167
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDK 237
T +S ID+V S+ EK D+ R P DV ++ + ++L +
Sbjct: 168 -TAQSNSESAVNCLIDAVWKSQDEKAGVKMDDWAQRYPTNTEDVARVCRDIVVKYLKQRP 226
Query: 238 QMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMDI 293
++ L L DR+++ ++ E +AE+ G S +++ + + VQ P D +
Sbjct: 227 RIHELPKILQFSSEDRMTKYEICEKLAEVLGLSLVGMVRNKQGNDPNASVQRPYDTHLS- 285
Query: 294 TKLVQTLNID 303
TK ++ L ID
Sbjct: 286 TKALKDLGID 295
>gi|322696186|gb|EFY87982.1| NAD dependent epimerase/dehydratase family protein [Metarhizium
acridum CQMa 102]
Length = 327
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 22/245 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+V+ AA P + DP+ A ++N+ +S L+ +++ LLI++STD V+ G+
Sbjct: 68 KPHVIVHSAAQRFPDRVDKDPEGARALNIAAS--RRLAQVALSRDILLIYISTDYVFPGI 125
Query: 136 --KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------ILRSSIIYGPQTISPVP 187
+ Y+ + P N+YG++K E+ I E+ + +LR ++YG +P
Sbjct: 126 PGDAPYEADATPKPTNLYGQTKFDGERAILEEAAKVGKPGSAIVLRVPVLYG-HAETPAE 184
Query: 188 KSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-----KQM 239
++ + +DSV ++G K++ H R P D+ ++ + ++L + K +
Sbjct: 185 SAVNV-LMDSVWKAQTEGAKIKMDHWAIRYPTNTEDIGRVCRDVAAKYLDANGPGHRKAL 243
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPADISMDITKLVQ 298
+L G D++++ ++ ++ +I G TS I+ + + VQ P D + TK +Q
Sbjct: 244 PSILQFSGEDKMTKYEICQLFGQIMGLDTSNIEANTQGNDPNAAVQRPYDCHLS-TKALQ 302
Query: 299 TLNID 303
L ID
Sbjct: 303 DLGID 307
>gi|431806344|ref|YP_007233245.1| dTDP-4-dehydrorhamnose reductase [Liberibacter crescens BT-1]
gi|430800319|gb|AGA64990.1| dTDP-4-dehydrorhamnose reductase [Liberibacter crescens BT-1]
Length = 292
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
+ DL++ F LK +PD+VVN AA + E++P++ +IN + +++S
Sbjct: 33 EFDLQTHKDFREFFLKI-KPDIVVNPAAYTSVEKAESEPETVFAINAYGA--GYIASAAA 89
Query: 118 NKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ I+LSTD V++G + S E P+NVYGKSK+A E+ + N+ ILR+
Sbjct: 90 HINVPCIYLSTDYVFDGSQVSPIDENTTPRPLNVYGKSKLAGEEMVISHTDNYVILRTGW 149
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL--S 234
IY P + + L + S ++ D+ P + I + +
Sbjct: 150 IYSPFNSNFLLTMLKLAETQS------EINVVSDQFGTPTSALHIADSIFKIARNLIMYP 203
Query: 235 EDKQMQLLLNV---GGPDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPAD 288
EDK ++ + N+ GGP +S Q AE + RG S ++ +S VQ P
Sbjct: 204 EDKTLRGIFNITARGGP--ISWAQFAEQIFTFSGERGGPVSKVRHISTKDYTAAVQRPKY 261
Query: 289 ISMDITKLVQTLNIDPVTYKDGVK 312
+D KL + ++ +KD ++
Sbjct: 262 SCLDFHKLEKIHDVRHSLWKDELR 285
>gi|358367893|dbj|GAA84511.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
kawachii IFO 4308]
Length = 324
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 31/310 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S +P + A DL+
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCLVVGQGYSRAIPPTIQKA----------DLEKEE 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +PD A +NV ++ + L+ T + LL++
Sbjct: 62 DIKNL-LNEAKPQIVIHCAANRFPDLCDQNPDQARRVNVDATRI--LAEETARRGALLVY 118
Query: 126 LSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G + Y+ + + P N+YG+ K E + E + +LR ++YG
Sbjct: 119 ISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGELAVLEATKDTGLGIVLRVPVLYG- 177
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDK 237
T +S ID+V ++ E D+ R P DV ++ + +++ E +
Sbjct: 178 -TAKENSESAVNTLIDAVYKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYVKERQ 236
Query: 238 QMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMDI 293
++Q L L DR+++ ++ E +A++ G S +++ + + VQ P D +
Sbjct: 237 RIQELPKILQFSSEDRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHLS- 295
Query: 294 TKLVQTLNID 303
TK ++ L ID
Sbjct: 296 TKALKELGID 305
>gi|134046340|ref|YP_001097825.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5]
gi|132663965|gb|ABO35611.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5]
Length = 276
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD V+N AA++ CE + + A N S V ++ ++ + L H+STD V++G
Sbjct: 64 NPDFVINTAAMTNVDFCEKEKELAYKANAIS--VGYIGKACKSTGSTLCHISTDYVFDGE 121
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
Y E D I P+N YG +K E+ + E N +I+R S YG SPV + W
Sbjct: 122 DGNYVETDVINPINYYGFTKAEGERILNEMDYENKSIVRISTPYG---FSPVKLNF-FTW 177
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L + + D+ + ++ +I++ + LS +L+ GG +++SR
Sbjct: 178 VLENLKYEKPINVITDQYNTSTNLNNLSEIMIKIQQNDLSG------ILHFGGSEKLSRY 231
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+ A ++E ++ LI PV +S ++ + P D S+
Sbjct: 232 EFALKISEDYNLNSKLISPVKSSELNWVAKRPKDTSL 268
>gi|389626815|ref|XP_003711061.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
70-15]
gi|351650590|gb|EHA58449.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
70-15]
Length = 315
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 29/317 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++KR LV G TG LG+ + + G + V T S L A D
Sbjct: 1 MTEKRALVTGATGLLGREVAKAFQLKHG--WTVTGTAFSRADGVSTLRA----------D 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + V L +P VVV+CAA P + DP+ +NV ++ L+ +++
Sbjct: 49 LANEAEVEKV-LDQVKPHVVVHCAANRFPDKVDQDPEGTRRLNVAATAS--LARLCADRD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS---NFAILRSS 175
LI++STD V+ G ++ Y P N+YG++K+ EK + E+ + ++R
Sbjct: 106 VALIYISTDYVFSGRPGEAPYAAGAATGPTNLYGQTKLDGEKAVLEEMAAKGRGVVMRVP 165
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG +P ++ + +D+V E K++ H R P DV ++ + ++
Sbjct: 166 VLYG-HAETPGESAVNV-LMDAVWKSQEAETKIKMDHWAIRYPTNTEDVGRVCADVAEKY 223
Query: 233 L--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPADI 289
+ + K + +L D++++ ++ +V EI G S I+ + + VQ P D
Sbjct: 224 VDAQDAKSLPKVLQFSSEDKLTKYEICQVFGEIMGLSIEGIEANTQGNDPNASVQRPYDC 283
Query: 290 SMDITKLVQTLNIDPVT 306
+ TK ++ L ID T
Sbjct: 284 HLS-TKELKDLGIDVST 299
>gi|183597262|ref|ZP_02958755.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827]
gi|188023577|gb|EDU61617.1| dTDP-4-dehydrorhamnose reductase [Providencia stuartii ATCC 25827]
Length = 297
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 46/319 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L PL +L+ AL + DL
Sbjct: 2 KILLLGKNGQVGWELQRAL----------------LPLGELI--ALDRHSKDYCGDLSKL 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ A ++ QPDV+VN AA + E++PD + IN S V L+ E LLI
Sbjct: 44 NDL-AETIELLQPDVIVNAAAYTAVDKAESEPDVSKLIN--SEAVKILAQCAEKVNALLI 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG---- 179
H STD V+ G + F+ E+D+ + +N+YG++K+ E++I + C N ILR+S +Y
Sbjct: 101 HYSTDYVFSGEGEHFWNEDDQTSALNIYGQTKLEGEQYIQKYCPNHLILRTSWVYSTFGN 160
Query: 180 --PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV---YVRDVVKIILALTNRWLS 234
+TI + K+ EK+ D+ P + D I L T +
Sbjct: 161 NFAKTILNLAKN------------REKLSIISDQYGAPTSAALIADCTAIALVKTLQ-QK 207
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADISMD 292
E + L+ G + ++ A+ SL I P+SA+ + P + M+
Sbjct: 208 EKCGIYHLVASGETNWYEYAKLITEEAKKNNIKLSLNEINPISATEYPLPAKRPYNSRMN 267
Query: 293 ITKLVQTLNIDPVTYKDGV 311
+K ++ NI+ +K GV
Sbjct: 268 SSKFKKSFNIELPDWKIGV 286
>gi|119499101|ref|XP_001266308.1| NAD dependent epimerase/dehydratase family protein [Neosartorya
fischeri NRRL 181]
gi|119414472|gb|EAW24411.1| NAD dependent epimerase/dehydratase family protein [Neosartorya
fischeri NRRL 181]
Length = 314
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 31/310 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G TG LG+ Q + + V +S P +L A DL+
Sbjct: 5 VLITGATGLLGR---QVFNTFKHSGCFVVGQGYSRATPPTILRA----------DLEKPE 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +P+ A +NV ++ L+ T ++ LL++
Sbjct: 52 DIKNL-LDEAKPQIVIHCAANRSPDLCDKNPEQARRVNVDATRT--LAEETSARKALLVY 108
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + E +P N YG+ K E + E +LR ++YG
Sbjct: 109 ISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKETGLGIVLRVPVLYGT 168
Query: 181 ---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+ S V + W + G K++ + R P DV ++ + ++L E
Sbjct: 169 AQNNSESAVNTLIDAVWKAQDENAGVKMDDWAQ--RYPTNTEDVARVCRDVVIKYLKERS 226
Query: 238 QMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISMDI 293
++ L L+ DR+++ ++ E +AE+ G S +I+ + + VQ P D +
Sbjct: 227 RIHELPKVLHFSSEDRMTKYEICEKLAEVLGLSLVGMIRNKQGNDPNASVQRPYDTHLS- 285
Query: 294 TKLVQTLNID 303
TK+++ L ID
Sbjct: 286 TKVLKDLGID 295
>gi|407982689|ref|ZP_11163358.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium hassiacum DSM
44199]
gi|407375729|gb|EKF24676.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium hassiacum DSM
44199]
Length = 286
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 69 AVALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS 127
A A + +P DVV+NCAA + E DPD+A ++N V L+ + LIH+S
Sbjct: 38 AAAARHIRPGDVVINCAAYTQVDAAETDPDAAHAVNAVGPGV--LAQACARADARLIHIS 95
Query: 128 TDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY----GPQT 182
TD V+ G K+ Y+ +D PV+VYG++K+A E + I+R++ +Y G
Sbjct: 96 TDYVFSGTKTEPYEIDDSPGPVSVYGRTKLAGEAAVRAALPGAHIVRTAWVYRGGEGRDF 155
Query: 183 ISPVPKSLPIQWIDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
++ + + L+ G+ VE D+ P YV D+V +L + ++ + +
Sbjct: 156 VAVMQR----------LAAGDGTVEVVDDQVGSPTYVADLVTALLEVADKGPALAAPVLH 205
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
N G VSR + A V E+ G ++PV + R P
Sbjct: 206 AANAGA---VSRYEQARAVFELLGADPQRVRPVGSDRHPRPAPRP 247
>gi|156740402|ref|YP_001430531.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM
13941]
gi|156231730|gb|ABU56513.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM
13941]
Length = 281
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 37/302 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV- 59
++ + +L+ GG+G+LG L+ + + ++V AT+HS P++ S V +++
Sbjct: 2 LTGRTILITGGSGFLGSALV---NTARAQGWNVVATYHSHQ-PRI-------SGVRWEML 50
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL++G+ + + PDVV++ A + PD M+I + +
Sbjct: 51 DLRNGAATRTLIEQIA-PDVVIHTAYR------QEGPD-MMAITAGGAGAVAQGAVMVRA 102
Query: 120 ENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIHLS+D V++G +S Y E D PV YG +K AE+ + + I+R+S+IY
Sbjct: 103 R--LIHLSSDVVFDGERSGRYTEADAPQPVTAYGAAKADAERLVADTHPAALIVRTSLIY 160
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G P Q++ V+ + FF DE RCP+ V D+ +L L D+
Sbjct: 161 G----GPKCPGRHEQFVLDVIDGRAEAIFFTDEWRCPIEVGDLAAALLELA----VLDRS 212
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+L+V GPD VSR + A +VA G ++ + ++ P + ++D +L Q
Sbjct: 213 G--ILHVAGPDVVSRYEFACLVAHALGRDPMHVR---GGPSPKDLRRPRNCALD-CRLAQ 266
Query: 299 TL 300
++
Sbjct: 267 SI 268
>gi|448599699|ref|ZP_21655502.1| RmlD substrate binding domain superfamily protein [Haloferax
alexandrinus JCM 10717]
gi|445736372|gb|ELZ87916.1| RmlD substrate binding domain superfamily protein [Haloferax
alexandrinus JCM 10717]
Length = 216
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 112 LSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L++ +++E +H STD V++G SFY+E+DE AP+ YG+SK+A E + + ++
Sbjct: 11 LAAVCDDREIPFVHYSTDYVFDGETDSFYEEDDEPAPIQEYGRSKLAGENAVRDVNTDAL 70
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
ILR S +YG + + P QW+ S L+ GE V F D+ P +V L L
Sbjct: 71 ILRLSFVYGARGDTSDLVGFP-QWVASTLAAGETVPLFTDQTMTPSRAGNVATTTLELL- 128
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
D +V V+ + E + + +LI+ + +DR P
Sbjct: 129 -----DSGSTGTFHVASQSAVTPYEFGEAICGVIDGDATLIESSVMADLDRPAARPQRSC 183
Query: 291 MDITKL 296
+D++ +
Sbjct: 184 LDVSNV 189
>gi|23016840|ref|ZP_00056592.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum
magnetotacticum MS-1]
Length = 292
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 50/323 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G + +G+HL L P T+ S +L G
Sbjct: 3 KLLILGASSSVGRHLWTRLG-----PDQAIGTYRSH-------------------ELAGG 38
Query: 65 SGFDAVA------LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
FD+V ++ G+ V A P C DP + +NV + ++ E+
Sbjct: 39 RRFDSVTQSIAQVIRPGESSHAVILLADPQPDSCVKDPQVSHRLNVVA-----MTRLVED 93
Query: 119 KENLLI---HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
L I ST+ V++GVK Y E DE P+ +YG+ K E F+ AILR +
Sbjct: 94 LWGLGITPIFASTEFVFDGVKGDYVETDEARPILLYGRQKKEVEDFLLASGKPHAILRFA 153
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + P +L WI L + D+ PV+V DV + IL + R L
Sbjct: 154 KVYGTE---PGDGTLFSAWIAQALGGATAMRCAADQVFSPVHVGDVGEAILRVAERDLGG 210
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ ++ G R +R+++ E+ RGY ++P S + + P D+SM
Sbjct: 211 ------IYHLSGNQRFNRLELLEMTLAALVRRGYPRIAVEPCSIDDFNLPERRPKDVSMR 264
Query: 293 ITKLVQTLNIDPVTYKDGVKLTL 315
KL+ + + +D + + L
Sbjct: 265 AEKLIAATGMTMMNPEDAIDVLL 287
>gi|395496054|ref|ZP_10427633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. PAMC 25886]
Length = 289
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 18/251 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + V F E L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGV-----FAEEARALGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKAAPYNEDDATHPLGVYGASKLAGERAIVAVGGEHLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + + D+ P + + AL W + + ++
Sbjct: 160 LT-MQRLLQEKPHMRIVADQIGAPTWAGTIANSTRALIEHWQAGQAGAWGVYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E I G + + ++ + +S+ + P + +D ++L Q ++ +
Sbjct: 219 SWFGFAQAIGEQLRIEGKACAELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPQWH 278
Query: 309 DGVKLTLAAEA 319
D ++ LA +A
Sbjct: 279 DALRECLAEQA 289
>gi|341615212|ref|ZP_08702081.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Citromicrobium sp. JLT1363]
Length = 290
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 27/278 (9%)
Query: 52 HSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPS 106
H VF D DL +G A ++ +PD+V++ AA + E++P+ AM+IN P
Sbjct: 23 HELVFAARPDFDLAD-AGSIARTIENARPDLVISAAAYTAVDQAEDEPELAMAINGEAPG 81
Query: 107 SLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK 165
+ +S ++HLSTD V++G + ++EED P+ VYG++K+A E+ +
Sbjct: 82 HIGRAAASVGAP----VVHLSTDYVFDGSGEHAWREEDPTGPIGVYGRTKLAGEQALAAS 137
Query: 166 CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVV 222
AILR++ +Y P ++ ++L E + + D+ P D+
Sbjct: 138 GGAHAILRTAWVYSP---------FGNNFVKTMLRLAESRDALNVVKDQYGNPTSALDIA 188
Query: 223 KIILALTNRWL-SEDKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYSTSLIKPVSASS 278
+LA+ +RW + + + G + A + + RG T + + +S
Sbjct: 189 DALLAVADRWQDAPGHGTNAVYHFAGTGSTNWADFARAIFDSSRKRGGPTCEVTGIPSSD 248
Query: 279 VDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLA 316
Q PA+ +D K T +++ + T+A
Sbjct: 249 YPTKAQRPANSRLDSAKFADTFGHAAPRWQESLDATVA 286
>gi|317508993|ref|ZP_07966625.1| RmlD substrate binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316252703|gb|EFV12141.1| RmlD substrate binding domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length = 286
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 132/324 (40%), Gaps = 56/324 (17%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
++ G G +G L Q SE E Y+V A L + LD
Sbjct: 1 MITGAGGQVGSRLAQVASEHE---YNVLA------LARTQLDICDE-------------- 37
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
DAVA DVVVNCAA + E+D A IN + V L++ + IH+
Sbjct: 38 -DAVAETLRPGDVVVNCAAETSVDTAESDSARAHQINAEA--VGNLAAACDRIGARFIHV 94
Query: 127 STDQVYEGVKSF---------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
STD V+ G + Y+ +DE P+ VYG+SK+A E+ +E+ ++R+S +
Sbjct: 95 STDYVFAGQEEGWFSVRLARPYETDDEPRPIQVYGESKLAGERLAFERNPRSVVVRTSWV 154
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVE------FFHDECRCPVYVRDVVKIILALTNR 231
+ + ID V + E+ E D+ P + D+V ++ L
Sbjct: 155 FSGERNG----------IDFVSTAREQAESGGVMRAVTDQVGSPTHSLDLVYGLMELV-- 202
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
W ++ + N GG SR +A V E G L++P + + R P +
Sbjct: 203 WRGDEGALLQFCNTGG---CSRYDLARAVFEELGADPGLVRPCMSWELSRPASRPPYSVL 259
Query: 292 DITKLVQTLNIDPVTYKDGVKLTL 315
+ VQ P ++D ++ L
Sbjct: 260 SVASWVQRGLRPPRAWRDALRYAL 283
>gi|209520653|ref|ZP_03269406.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160]
gi|209498936|gb|EDZ99038.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160]
Length = 307
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 18/229 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V+V+GG+G LG+ L L+ +G + + T S P Q++ +D++
Sbjct: 3 KVVVIGGSGLLGRALNDELARHDG--WQIVTTAFSRPSRQMVA-----------LDVRDS 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ +PD VV AA P VCE DP A ++NV + V ++ +
Sbjct: 50 LAVERF-IEHVKPDAVVIAAAERRPDVCERDPALARALNVDA--VRTIARAANRHGAWTL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G Y+ + AP+N YG+SK+ E+ + E +LR ++YGP
Sbjct: 107 SISTDYVFDGTHPPYRHDSTPAPLNAYGQSKLEGERALIETADRGCVLRLPLLYGPIVSW 166
Query: 185 P--VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
P SL S S G+ R P + DV +I + R
Sbjct: 167 PESAVTSLVPAIAASAASDGQTATMDAWAIRYPTFTPDVAVVIRQMLER 215
>gi|158605288|gb|ABW74898.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. ATCC 53159]
Length = 288
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 36 THHSTPLPQLLLD-ALPHSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
T H + Q L + A+ H VF + DL +A + PD++V+ AA +
Sbjct: 6 TGHDGQVAQSLAEQAVGHELVFTTYPEFDLSKPETIEAGVARV-HPDLIVSAAAYTAVDK 64
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
E++P+ AM+IN V L+ +IHLSTD V++G + ++E+D P+ V
Sbjct: 65 AESEPELAMAINGDGPGV--LARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGPLGV 122
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YG +K+A E+ + + A++R + +Y P + V L + + + D
Sbjct: 123 YGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTML------RLAETRDALNVVED 176
Query: 211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYS 267
+ CP D+ IL + W +D L + G + A + + RG
Sbjct: 177 QWGCPSSALDIATAILTVVGHW-QQDGATSGLYHFAGTGETNWADFASTIFAESAKRGGP 235
Query: 268 TSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTL 315
++ + + +S PA+ +D T+ +T ++D + + L
Sbjct: 236 SATVTGIPSSGYPTPATRPANSRLDCTRFAETFGYRAPAWQDSLNVVL 283
>gi|427739287|ref|YP_007058831.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
gi|427374328|gb|AFY58284.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
Length = 294
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 35/231 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYD--VAATHHSTPLPQLLLDALPHSFVFFDVDL 61
K +L++G G +G L + L +PY +A L Q P +F
Sbjct: 3 KSILLIGCNGQIGTQLQKTL-----QPYGNVIAVARREAELTQ------PQTFEKL---- 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
++ QP +++N AA + E++P+ A +IN + + ++ +
Sbjct: 48 ----------IEQNQPQIIINAAAYTAVDKAESEPELANTINAIAPQL--MAQQAQQSGA 95
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTD V++G + Y+E+D P+++YGK+K+ AE+ I CS++ ILR++ +YG
Sbjct: 96 LLIHLSTDYVFDGKNNCPYQEDDATNPLSIYGKTKLLAEQAIRSTCSDYLILRTAWVYGC 155
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
S K++ + ++ +++ D+ P + +D+ + I AL ++
Sbjct: 156 GGKSNFVKTML-----RLGAQKSELKIVCDQIGSPTWAKDIAEAITALISK 201
>gi|254167999|ref|ZP_04874847.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|289595932|ref|YP_003482628.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|197623042|gb|EDY35609.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|289533719|gb|ADD08066.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
Length = 283
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 38/294 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V ++G G LG L++ EI + PL LD
Sbjct: 2 KVAIIGANGQLGSDLVEVFGEI------------AVPLTHRDLDV--------------- 34
Query: 65 SGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +D++ LK PDV++N AA E +P A ++N +L +++ + +
Sbjct: 35 TNYDSLKILKKIDPDVIINTAAYVRVDDAEKEPKKAFNVNAIGAL--YVAKIANKLDAIN 92
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y EED P+NVYG SK E F + I+R + +YG +
Sbjct: 93 VYISTDYVFDGRKGAPYTEEDMPNPINVYGASKYMGEIFTRNYSKKYYIVRVASLYGKKG 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + WI +GE+++ D P Y RDV + + L R + + +
Sbjct: 153 ARGKGGNF-VNWIIEKARRGEEIKVVDDIIMSPTYTRDVAETLKKLLER--KPEYGIYHM 209
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+N G S + A+ + I G+ IKP+ ++ + R + P +++ K+
Sbjct: 210 VNEG---YCSWYEFAKEIVNILGFEIP-IKPIGSNELIRLARRPKFSALENKKI 259
>gi|291242991|ref|XP_002741389.1| PREDICTED: methionine adenosyltransferase II, beta-like
[Saccoglossus kowalevskii]
Length = 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 147/316 (46%), Gaps = 25/316 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVL+ G +G LG+ +L+ + + +A + + L + VD+
Sbjct: 2 KRVLITGASGLLGRPVLKEFTNASWEVLGLAFSRATGSLKK--------------VDITD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F +P VVV+ AA P + E + +NV ++ + ++ +
Sbjct: 48 EEQVRNVMKEF-KPSVVVHSAAERRPDIVEKQEEVTKKLNVDTTAM--IARLCGEFGAFM 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G + Y+ + + P+N YG+SK+ EK + + AILR I+YG +
Sbjct: 105 LYISTDYVFDGKNAPYQVDAQPNPLNKYGRSKLDGEKATSDNLTESAILRIPILYG--EV 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S +V + + R P +V D+ II L + L +D ++ +
Sbjct: 163 EKLSESAVTILFQAVQDTNKPATMCDYQKRYPTHVNDIAVIIRKLAEKRL-QDPSIKGIF 221
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI- 302
+ + +++ MA +AEI + I V+ +G P D+ +D T+L Q++ I
Sbjct: 222 HYSSNELMTKYSMAMTMAEIFNIPSQHI--VADKEPSKGTPRPYDVHLDSTRL-QSIGIT 278
Query: 303 -DPVTYKDGVKLTLAA 317
+ +K+G++ L +
Sbjct: 279 TEQTPFKEGIQKCLKS 294
>gi|116251390|ref|YP_767228.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256038|emb|CAK07119.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 295
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + V ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGVVAQAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKVSAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ +R +++ + ++ +
Sbjct: 155 --FGNNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVADPEPSLRGIF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ E+ G T ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFTELSKSGGRTVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|427711660|ref|YP_007060284.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. PCC 6312]
gi|427375789|gb|AFY59741.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. PCC 6312]
Length = 317
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 134/319 (42%), Gaps = 49/319 (15%)
Query: 2 SKKRVLVVGGTGYLGQHLLQ---GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S RV+++G G +G L Q L I+ P ++ +P +
Sbjct: 8 SSLRVMILGANGQVGWQLQQQGLALKRIDTFPLEI--------IP------IARQGTQLT 53
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFT 116
+DL S V ++ QP +V+N AA + E++P+ A+ IN VP L +
Sbjct: 54 LDLTDSSAIQTV-IRTHQPHIVINAAAYTAVDRAESEPELALEINGTVPGVL----AVAV 108
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
E LLIH STD V++G S Y E D P+N YG+SK+ E+ I K N ILR+S
Sbjct: 109 EKIGGLLIHYSTDYVFDGTSSTPYLETDSTTPINAYGQSKLIGEQAIQAKAQNHLILRTS 168
Query: 176 IIYGPQ------TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+Y + T++ + ++ P ++ +D+ P + +I +
Sbjct: 169 WVYDVRGKNFLLTMAKLAQTRP------------QISVVNDQIGSPTSAPLIARITYQIL 216
Query: 230 NRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVV----AEIRGYSTSLIKPVSASSVDRGV 283
+ L+ L L ++ S AE + AE + + + P+S
Sbjct: 217 AQLLATPDWQTLTGLYHLTAQGFTSWYGFAENIVAHLAESSSHPLAELIPISTRDYPTAA 276
Query: 284 QSPADISMDITKLVQTLNI 302
Q PA ++ KL QT I
Sbjct: 277 QRPAFSRLNCQKLQQTFGI 295
>gi|392865446|gb|EAS31237.2| dTDP-4-dehydrorhamnose reductase [Coccidioides immitis RS]
Length = 315
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 27/318 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++ LV G +G LG+ +L + DV + + Q A P V DL +
Sbjct: 3 QKALVTGASGLLGRQVLNAFKK------DV----NWEAVGQGFTRAAPPDIV--KADLTN 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S +++ L +P VVV+CAA P C+ PD A +NV ++ L+ T + LL
Sbjct: 51 PSEIESL-LDEVKPQVVVHCAANRFPDQCDAHPDLARKVNVEATKA--LAKATLQRSILL 107
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K+ E + E +LR ++Y
Sbjct: 108 IYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLY 167
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
G T S ++ I + KV+ R P DV ++ + ++L E +
Sbjct: 168 GSADTNSESAVNVLIDAVWKAQDADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKYLGEQE 227
Query: 238 Q---MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV-SASSVDRGVQSPADISMDI 293
+ +L D+V++ +M E AEI G S ++ + + GVQ P D +
Sbjct: 228 RAASFPTILQFSSEDKVTKYEMCERFAEILGLPLSGMERIKQGGTPGNGVQRPFDTHLS- 286
Query: 294 TKLVQTLNIDPVTYKDGV 311
TK ++ L I PV +D V
Sbjct: 287 TKALKELGI-PVDTQDFV 303
>gi|423689387|ref|ZP_17663907.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SS101]
gi|387997865|gb|EIK59194.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SS101]
Length = 289
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + + E++PD+A +IN + + E + L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDLAESEPDAAFAINAIAPGI-----LAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E+D P+ VYG+SK+A E+ I + ILR+S +Y S K+
Sbjct: 105 DGSKPAAYTEDDTPNPLGVYGQSKLAGEQAIAAVGGQYLILRTSWVY-----SSHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + L +W + + ++
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIANSTRVLIEQWQAGKAGDWGVYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S AE + E G + + ++P+ +S+ + P + +D T+L Q ++ ++
Sbjct: 219 SWFGFAEAIGEQLRAEGKACAELEPIPSSAYPTPAKRPLNSRLDCTRLQQQWHVSQPQWQ 278
Query: 309 DGVKLTLAAE 318
D + LA +
Sbjct: 279 DALHECLAQQ 288
>gi|315499261|ref|YP_004088065.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48]
gi|315417273|gb|ADU13914.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48]
Length = 299
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 21/243 (8%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K +PDV+++ AA + E++ + A +IN L+ + L+HLSTD V
Sbjct: 47 IKAARPDVIISSAAYTAVDKAESETELAQAIN--GDGPGALAKIAAELDIPLLHLSTDYV 104
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G K Y E D PV+VYG +K++ E I +N ILR++ +Y P +
Sbjct: 105 FAGDKDGIYTESDAPGPVSVYGMTKLSGETQIAAATANHVILRTAWVYSPYGNN------ 158
Query: 191 PIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVG 246
++ ++L GE ++ D+ CP Y ++ + +L + R + D +++ + ++
Sbjct: 159 ---FVKTMLRLGETRDELNVVADQKGCPTYAPEIARALLHIAQRVSKDPDPKLRGIFHLT 215
Query: 247 GPDRVSRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT--LN 301
G + AEV+ E +RG + P+ + + PA+ + KL + L
Sbjct: 216 GQGETTWAGFAEVIFEGSALRGGKAVKVTPIPTEAYPTPAKRPANSRLSGEKLAEVYDLR 275
Query: 302 IDP 304
+DP
Sbjct: 276 LDP 278
>gi|115377423|ref|ZP_01464627.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1]
gi|310820399|ref|YP_003952757.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
gi|115365580|gb|EAU64611.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1]
gi|309393471|gb|ADO70930.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
Length = 302
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 38/301 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDL 61
++VL++G +G++G+ L Q L E + V + P D L S +
Sbjct: 2 RQVLIIG-SGFIGRRLGQALREAG---HSVVLSSRHPPEGPWAGDWRGLDASRPGAIAEA 57
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+G AV L G D+ CE+ P++AM+ + + + L
Sbjct: 58 VGATGAHAVVLVHGPSDITG----------CESAPEAAMATH--AGIATHLCQEAPTVRK 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+LI STD V++G + Y E +P N YG++K+AAE+ + I+R+S++YG +
Sbjct: 106 VLI--STDNVFDGQDTGYDESRAPSPANAYGRAKLAAERVLLAADPGALIVRTSLVYGYE 163
Query: 182 TISPVPKSLPIQW------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
P+ W + + G+ V+ D P+ V D ++ L S
Sbjct: 164 -----PRGPGRGWRNFFMVVADTVRSGQTVQAPVDHWNTPILVDDAAAVLTRLIPGGPSG 218
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+L++ GPDRVSR + ++A+ G +L++PV A + R PA+ + +
Sbjct: 219 ------VLHLAGPDRVSRFEWGRLIAQSLGQDPNLVRPV-ARAAGRYSCRPANACLRSLR 271
Query: 296 L 296
L
Sbjct: 272 L 272
>gi|254478581|ref|ZP_05091955.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM
12653]
gi|214035510|gb|EEB76210.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM
12653]
Length = 298
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 5 RVLVVGGTGYLGQHLL----QGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
R+L+ G G L L +G SEI E P A T +L + L F D
Sbjct: 2 RLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFIDE 61
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTE 117
+PD+++NCAA + CE+D D+A +N P +L + +
Sbjct: 62 ---------------YKPDIIINCAAYTNVDKCESDVDAAFKVNAIGPRNL----AMAAQ 102
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
L+H++TD V+ G + ++E D P+NVYGK+K+ E+++ E C + I+R++
Sbjct: 103 RVGAKLLHIATDYVFNGTGNVPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAW 162
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+YG K+ + + KG +E +D+ P D+ IL L L+E+
Sbjct: 163 LYG-----KYGKNFVYTILKAAKEKG-YLEVVNDQKGNPTNAEDLAYHILKLV---LTEE 213
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + G S A + E G + +++ P+++ ++R + P S+D L
Sbjct: 214 YG---IYHCTGKGECSWYDFACKIVEYAGINCTVV-PITSDKINRPAKRPFYSSLDNMML 269
Query: 297 VQTLNIDPVTYKDGVK 312
T+ + ++D +K
Sbjct: 270 RCTIGDEMRNWEDALK 285
>gi|397690694|ref|YP_006527948.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
gi|395812186|gb|AFN74935.1| putative dTDP-4-dehydrorhamnose reductase [Melioribacter roseus
P3M]
Length = 293
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 146/305 (47%), Gaps = 31/305 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++ + GG+G +GQ+L ++E +D+ ++ + + L
Sbjct: 2 KIFITGGSGLIGQYLNIYIAE----KHDILTQYYRNK-------GNCKEYNSVQLQLNDY 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTENKENLL 123
+ F +PD VV+ AA+S ++ S + INV ++ L+ +E + +
Sbjct: 51 DKLKEIFENF-RPDAVVHAAAISNSAKADSLSRSYVYEINVNAT--KKLAELSERYNSKI 107
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--- 179
I+LSTD VY G + S+ E ++ PV++Y ++K+ E+ I E N+ ILR ++IYG
Sbjct: 108 IYLSTDLVYAGYRGSYLNENAKLIPVSLYAETKLMGEQKIKEATQNYIILREALIYGFGL 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
T + ++L + E+V+ F D+ R P+ ++ ++I L ED +
Sbjct: 168 NHTTNFFQETLK------KIKNNERVKLFTDQFRSPLSLKVAARMIARLIE---IEDLKS 218
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
+ LN GG +R+SR + + +I G L+ + + + D+S++I KL ++
Sbjct: 219 E-TLNFGGNERLSRYDLIDFACKIAGLRNDLLIKTTMDEENYPYK-VYDVSLNIDKL-KS 275
Query: 300 LNIDP 304
I+P
Sbjct: 276 YGIEP 280
>gi|443898086|dbj|GAC75424.1| C-3 sterol dehydrogenase [Pseudozyma antarctica T-34]
Length = 1153
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 28/268 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + +E K YD A + P S +DL
Sbjct: 2 KVLITGASGLLGRAVHHLCTE---KSYDTKALAFTRSDP---------SKGLVKLDLTDP 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ LK QPDV+V+ AA P V ENDP ++ +INV P+S+ + +K +
Sbjct: 50 AAVESC-LKDFQPDVIVHTAAERRPDVVENDPAASHAINVEAPASIATLAAQL--DKPPI 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYGP 180
LI++STD V++G K Y +D P+N YG SK+ E+ + E K +F LR ++YG
Sbjct: 107 LINISTDYVFDGSKPPYTVDDAPNPLNAYGVSKLQGERAVAEHAKPGHFTNLRVPVLYG- 165
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+TI+ ++ + ++++ S +K + + R P V DV IL L
Sbjct: 166 RTITNDESAVNV-LLNAIQPPAGSSSPKKCDAY--AVRYPTNVADVAAAILRLAEVHAES 222
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
K++ + + + +++ M V++ I
Sbjct: 223 AKELPPITHFSAKEAMTKYDMCMVLSRI 250
>gi|300853734|ref|YP_003778718.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
gi|300433849|gb|ADK13616.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
Length = 295
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 20/239 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P +++NCAA + CE D +SA+ +N + L+S +N + LIH+STD V+ G
Sbjct: 64 PSIIINCAAYTNVDKCETDFESALKVNSLGARNLALAS--QNTKIRLIHISTDYVFNGRG 121
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ ++E D PV+VYGK+K+ E++I E CS + I+R+S +YG K+ +
Sbjct: 122 TVPFREYDLPDPVSVYGKTKLLGEQYIKENCSRYFIVRTSWLYG-----LYGKNFVYTIL 176
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKII--LALTNRWLSEDKQMQLLLNVGGPDRVSR 253
+ +G ++ +D+ P D+ I LALT+ + + + G S
Sbjct: 177 KAAKERGH-LDVVNDQRGNPTNAEDLAYHILKLALTDEY--------GVYHCTGNGECSW 227
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + + G + + P+++ +++R + P S+D L T+ + +KD +K
Sbjct: 228 YDFACKIVDYAGIDCT-VSPMTSENLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALK 285
>gi|440632620|gb|ELR02539.1| hypothetical protein GMDG_01064 [Geomyces destructans 20631-21]
Length = 318
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 38/324 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS + LV G +G LG+ + + K + V T + P +L VD
Sbjct: 1 MSSQTALVTGASGLLGRAVTTAFNR---KSWSVTGTGLTRANPPAILA----------VD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + A +L +P VVV+CAA P C+ DP +A ++NV ++ L+ T +
Sbjct: 48 LGDSAAV-AKSLDDVKPSVVVHCAANRFPDSCDRDPTAARALNVAATRS--LAEQTAQRG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+LI++STD V+ G ++ Y+ AP N+YG +K+ EK + E + +L
Sbjct: 105 IVLIYISTDYVFSGAPGEAPYETSATPAPTNLYGMTKLEGEKAVGEAYAAAGGKGRGVVL 164
Query: 173 RSSIIYGP--QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG + SL +D+V ++ EKV R P DV +++ +
Sbjct: 165 RVPVLYGKADKHADSAVNSL----VDAVWKAQKEKVVMDGWAKRFPTNTEDVGRVVADIA 220
Query: 230 NRWLSE-----DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGV 283
++S+ + + +L D ++ +M E+ A + G + K V + + GV
Sbjct: 221 TLYISKIEAGRAEGLPAILQFSAEDLYTKYEMCELFAHLMGLGLEKMEKDVRGNEGNTGV 280
Query: 284 QSPADISMDITKLVQTLNIDPVTY 307
Q P D + T+ ++ L I+ T+
Sbjct: 281 QRPFDCHLS-TRALKELGIEVHTH 303
>gi|209967308|ref|YP_002300223.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum centenum SW]
gi|209960774|gb|ACJ01411.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum
SW]
Length = 299
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 141/327 (43%), Gaps = 46/327 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++R+L++GGTG +G L + E + + V+A S +D
Sbjct: 1 MERRRLLLLGGTGQVGTALRRLAPE---RGWSVSAPERSV------------------LD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + D++ D+VVN AA + E + D+A++ N ++ L+ E
Sbjct: 40 LATAD-RDSLRQAVAAADLVVNAAAYTRVDQAETERDAAIAAN--ATGPGLLARVCAEAE 96
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+HLSTD V++G + Y+E+D +AP+ VYG SK A E + E ILR++ ++
Sbjct: 97 RPLLHLSTDYVFDGSGTRPYREDDPVAPLGVYGASKAAGEAAVREAGPRHVILRTAWVFS 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
P + ++ ++L G +V D+ CP D+ L + +R L+ D
Sbjct: 157 PDGNN---------FLRTMLRLGRERPEVRVVDDQRGCPTAADDIAAACLGIADR-LAAD 206
Query: 237 K-----QMQLLLNVGGPDRVS---RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
+ + +V G + AE RG + P++ + + PA
Sbjct: 207 RPDDASPLWGTFHVAGTPATTWHGFAAAIFAEAERRGLPVPRLLPITTADYPTPTRRPAF 266
Query: 289 ISMDITKLVQTLNIDPVTYKDGVKLTL 315
+D T++ I ++ GV+ L
Sbjct: 267 SVLDCTRIGTVYGIAAPDWRAGVRRCL 293
>gi|321479218|gb|EFX90174.1| hypothetical protein DAPPUDRAFT_299978 [Daphnia pulex]
Length = 269
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS KRV++ G +G LG+ +L + + + V T S L+ +D
Sbjct: 1 MSSKRVVITGASGLLGRAVL---AAFKNSQWTVLGTSFSRTGEDLV-----------SID 46
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + + + F P+ +V+CAA P + D D + +NV ++ L+
Sbjct: 47 ICNHAKTEELIRNF-MPNCIVHCAAQRFPDKVDKDLDGTIRLNVEAT--KNLAVLAAKLG 103
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+I++STD V++G K Y E D P+N YGK+K+ E+ E + +LR ++YGP
Sbjct: 104 ATMIYISTDYVFDGTKPPYSETDTPNPLNTYGKTKLQGEQVTLESSQDHIVLRVPVLYGP 163
Query: 181 -QTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ I ++ +Q +L E + D E R P +V D+ I + L +
Sbjct: 164 VEYIGESAVTVLLQ----LLFDSESNKLVSDSEIRYPSHVDDIAFICVKLL-ELKQTNAD 218
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
++ + + GG + +++ M + +A + S I P
Sbjct: 219 VKGIFHWGGKESMTKYGMVQDIASVFQLPMSHISP 253
>gi|442322017|ref|YP_007362038.1| dTDP-4-dehydrorhamnose reductase [Myxococcus stipitatus DSM 14675]
gi|441489659|gb|AGC46354.1| dTDP-4-dehydrorhamnose reductase [Myxococcus stipitatus DSM 14675]
Length = 300
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 13/222 (5%)
Query: 53 SFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
++ + VDL + A AL PDVV++CA+++ CE + ++A + NV ++
Sbjct: 40 TYDYVSVDLTRDADV-AQALSSAAPDVVIHCASMTDVDSCEKNAEAAYAANVQATAAVAR 98
Query: 113 SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL 172
+ T L+H+STD V++G Y E P VY +K E+ + AI
Sbjct: 99 GARTAGAH--LVHVSTDYVFDGDAGPYDEAAVPNPRGVYALTKHLGEQTVRVLAPGSAIA 156
Query: 173 RSSIIYGPQTISPVPKSLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R++++YG PV L W+ + LSKG+ V F D+ P +V +++ L R
Sbjct: 157 RTAVVYG---WPPVEGRLNFGAWLVTNLSKGQSVRLFDDQIVSPSLADNVAAMLVELGER 213
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
++ + N G + RV + E+ G+ L+ P
Sbjct: 214 ------KLGGVWNTCGGAVMDRVAFGRALCEVFGFDAGLVIP 249
>gi|427784833|gb|JAA57868.1| Putative methionine adenosyltransferase 2 subunit beta
[Rhipicephalus pulchellus]
Length = 350
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 24/296 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VL+ G +G LG+ L++ + ++V HS LL VDL
Sbjct: 48 KTVLITGASGLLGRSLVKAF---QAASWNVTGLAHSRASGDLL-----------SVDLTD 93
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K +P+V+V+ AA P E D D++ ++NV +S L++ ++
Sbjct: 94 HQQTEKI-VKERKPNVIVHSAAQRFPDKVEKDYDASYALNVTAS--KDLAALADSVGAAF 150
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I +STD V++G Y E + P+N YG +K AEK + + +LR ++YG +
Sbjct: 151 IFISTDYVFDGRNPPYSENAKPNPLNKYGTTKAEAEKAVLTVKPDSIVLRVPVLYGGEEY 210
Query: 184 -SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S S+ Q ++ + + V+ E R P + D+ I++ L R L E + + +
Sbjct: 211 ASESAVSVLCQLLN---DRSKHVKASDYEIRYPSHTEDIAYIVVQLAERRLQE-RSVSGV 266
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
G + +++ M + + G +T + P S G P D ++ T+L Q
Sbjct: 267 YQWCGLEPLTKYGMVRAIGQSHGLNTDHVSPDPEPS--SGAPRPRDCRLEHTRLEQ 320
>gi|416103354|ref|ZP_11589347.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|3132256|dbj|BAA28133.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus
actinomycetemcomitans]
gi|348008089|gb|EGY48368.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 35/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LG+ L + L ++ Y+V A S LD VF +D
Sbjct: 3 RLLITGAGGQLGRSLAKLL--VDNGRYEVLALDFSE------LDITNKDMVFSIID---- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F +P+V++N AA + E + SA S+NV V +L+ + ++
Sbjct: 51 --------SF-KPNVIINAAAYTSVDQAELEVSSAYSVNVRG--VQYLAEAAIRHNSAIL 99
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G KS YKE D I P+ VYGKSK E+ + ILR+S +G
Sbjct: 100 HVSTDYVFDGYKSGKYKETDIIHPLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + +L D+ P Y D+ +++ + + + + +
Sbjct: 160 NFVKTMLRLAKNRDILG------VVADQIGGPTYSGDIASVLIQIAEKIIVGETVKYGIY 213
Query: 244 NVGGPDRVSRVQMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS A E VA+ + L+ ++ + + PA+ +D+TK+ Q
Sbjct: 214 HFTGEPCVSWYDFAIAIFDEAVAQKVLENVPLVNAITTADYPTLAKRPANSCLDLTKIQQ 273
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 274 AFGIQPSDWQRALK 287
>gi|428314793|ref|YP_007150977.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
gi|428256176|gb|AFZ22133.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
Length = 301
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 31/239 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+L+ G TG LGQ L + L+ + GK V ST VDL
Sbjct: 2 RRILLTGCTGQLGQELQRTLAPL-GK---VIGVDRST------------------VDLSQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ +PDV+VN AA + E + + A +IN + V ++ + L
Sbjct: 40 ETTIRQRLVEI-KPDVIVNAAAYTAVDKAETETELAQAINATAPKV--MAEEAQRLGATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K+ Y E+D P+ VYG++K+ E+ I + C+N ILR++ +YG
Sbjct: 97 IHVSTDYVFDGGKNTPYTEDDVTNPLGVYGRTKLEGEEGIRQTCTNHLILRTAWVYG--- 153
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ K ++ + + ++ E+V D+ P + D+ + I L ++ E Q+ +
Sbjct: 154 --SLGKVNFVKTMLRLFAEREEVRVVADQVGSPTWAADLAQAIATLLSQTNQEPGQLSI 210
>gi|427722511|ref|YP_007069788.1| dTDP-4-dehydrorhamnose reductase [Leptolyngbya sp. PCC 7376]
gi|427354231|gb|AFY36954.1| dTDP-4-dehydrorhamnose reductase [Leptolyngbya sp. PCC 7376]
Length = 292
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 38/317 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G +G LGQ + Q L E +G+ Y ++ S L + +L S+++ +V
Sbjct: 3 KILLIGSSGQLGQEV-QKLLEFKGEDY-ISCDRGSLNLSNI---SLIESYIY-NV----- 51
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
QPD+V+NC+A + E + + A IN +V ++ T+ + LI
Sbjct: 52 -----------QPDIVINCSAYTAVDRAEEEVEQAFLIN--HLVVEAIAKATKQIGSYLI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G Y EED P + YGKSK+A E+ I ++ + I+R++ +YG
Sbjct: 99 HISTDYVFDGQNYLPYSEEDLTNPRSTYGKSKLAGEQAIIKQTDKYIIVRTAWVYGIYGK 158
Query: 184 SPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ ++L G E + D+ P + +D+ +L + + E+ +
Sbjct: 159 G--------NFVKTMLKLGQARENLGIVSDQIGSPTWTKDLAMALLQICKQLSQENSGIY 210
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQ 298
N G + ++ GY L +KP++ S Q P + K+
Sbjct: 211 HFTNSGVCSWYDFASAIFMESKSLGYPLKLTQLKPITTSEYPTPAQRPHYSVLSTKKISN 270
Query: 299 TLNIDPVTYKDGVKLTL 315
L P + ++L L
Sbjct: 271 LLGEYPPHWHQSLRLML 287
>gi|340344012|ref|ZP_08667144.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519153|gb|EGP92876.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 296
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 24/308 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+GG+G +G +++ IE K DV T++ + + H +D++
Sbjct: 2 KILVIGGSGIIGSKIVRRF--IESKN-DVIYTYYENKIDV----GIGHK-----LDIRKK 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ K D++++ AAL+ +CE D A SINV + + + + ++
Sbjct: 50 DETIDIISKI-NADLIIHAAALTNVDLCEIDKKLADSINVEGT--ENIVTGCQRINCKIV 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++ST V+ G K+ Y EEDE +P YG +K+ EK + +F ILR+ Y +
Sbjct: 107 YISTSFVFNGEKNKYFEEDEPSPTTYYGLTKLKGEKIVKNSKLSFLILRTDQPYDWK--E 164
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
++ + + L + + + D P Y+ D + + L N LS + +
Sbjct: 165 KWQRTNSVLRVLQTLQERKILNEIMDWYNVPTYIPDFINALENLINCNLSG------IYH 218
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
V G D V+R + + AEI G +LIKP+S+ S++ + ++++ KL Q I
Sbjct: 219 VCGSDFVNRYEWSLSTAEIFGLDKNLIKPISSKSLNLPAKR-VNVNLSNEKLFQKTGIKM 277
Query: 305 VTYKDGVK 312
+ KDG++
Sbjct: 278 MGIKDGIE 285
>gi|429217134|ref|YP_007175124.1| dTDP-4-dehydrorhamnose reductase [Caldisphaera lagunensis DSM
15908]
gi|429133663|gb|AFZ70675.1| dTDP-4-dehydrorhamnose reductase [Caldisphaera lagunensis DSM
15908]
Length = 300
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 119/230 (51%), Gaps = 18/230 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSL--VNWLSSFTENKENLLIHLSTDQVYE 133
+PD +++ A + CE + + + N S+L V ++F + +I+LSTD V++
Sbjct: 63 KPDAIIHIAGMGDVDNCEVEKEKCFNSNYLSTLNIVKVSNAFNIH----MIYLSTDYVFD 118
Query: 134 GVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
G K YKE + P+N YG +K+ E + + +N+AI+R+S IYG + +S
Sbjct: 119 GQKGNYKENETPNPINYYGLTKLLGESSV-KTLTNYAIVRTSTIYGI----GIGRSNFAM 173
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
++ + L GE+++ D+ P + K ++ + +K++ + +VGG +R+SR
Sbjct: 174 YLINKLKNGEEIKAVVDQFTSPTNTTLLAKALIEIA------EKRLIGVFHVGG-ERLSR 226
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ A +AE G+ T LI+ + + + P D S++ + ++I+
Sbjct: 227 YEFAVKLAEKMGFDTDLIRKTYINEMKWKAKRPIDSSLNFDNTKKFIDIN 276
>gi|154285112|ref|XP_001543351.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150406992|gb|EDN02533.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 332
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 35/323 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVVGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ LL
Sbjct: 57 -EGEIVALLDRTKPNVVVHCAANRFPDKCDQNPDAARKINVVATRS--LARATSSRSILL 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++Y
Sbjct: 114 IYISTDYVFPGRAGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPALQNSESAINTLVDAVWKAQNANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLSL 231
Query: 235 --------------EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD 280
K + +L D +++ Q+ + +AEI G + P+
Sbjct: 232 FVGAAADREGDGGFSFKTLPRILQFSSEDAMTKYQICQTLAEILGLPLPGMMPLKDGPKP 291
Query: 281 RGVQSPADISMDITKLVQTLNID 303
VQ P D + T+ ++ + ID
Sbjct: 292 GEVQRPYDTHLS-TEELRRIGID 313
>gi|343426532|emb|CBQ70061.1| related to Vacuolar protein sorting-associated protein VPS5
[Sporisorium reilianum SRZ2]
Length = 1252
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 44/243 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q + K YD A S P L ++L
Sbjct: 2 KVLITGASGLLGRAVHQ---QCIDKGYDTQALAFSRADPAKKL---------VKLNLTDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ +F +PDV+V+ AA P V E DP ++ +INV P+S+ + +K L
Sbjct: 50 AAVESCLREF-EPDVIVHTAAERRPDVVEKDPAASHAINVDAPASIATIAAQL--DKVPL 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYGP 180
LI++STD V++G K YK +D P+N YG SK+ E+ + E K +F LR ++YG
Sbjct: 107 LINISTDYVFDGSKPPYKVDDAPNPLNAYGVSKLQGERAVEEHAKPGHFTNLRVPVLYGR 166
Query: 181 -------------QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
I P P S + D+ R P V DV K IL
Sbjct: 167 TITNDESAVNILLDAIQPPPGSTATKKCDAYA------------VRYPTNVADVAKAILK 214
Query: 228 LTN 230
L
Sbjct: 215 LAQ 217
>gi|300853757|ref|YP_003778741.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
gi|300433872|gb|ADK13639.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
Length = 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 20/239 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VNCAA + CE D ++A +N + L+S +N + L+H+STD V+ G
Sbjct: 64 PDIIVNCAAYTNVDKCEIDFENAFKVNSLGARNLALAS--QNTKTKLVHISTDYVFNGRG 121
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ ++E D P++VYGK+K+ E++I E CS + I+R+S +YG + V L +
Sbjct: 122 AIPFRECDLPDPISVYGKTKLLGEQYIRENCSRYFIVRTSWLYGLYGKNFVYTILKV--- 178
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVK--IILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
KG ++ +D+ P D+ + LALT + + + G S
Sbjct: 179 --AKEKGH-LDVVNDQRGNPTNAEDLAYHLLKLALTCEY--------GIYHCSGKGECSW 227
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + E G + + P+++ ++R + P S+D L T+ + +KD +K
Sbjct: 228 YDFACKIVEYAGIDCT-VSPMTSEKLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALK 285
>gi|71022409|ref|XP_761434.1| hypothetical protein UM05287.1 [Ustilago maydis 521]
gi|46101303|gb|EAK86536.1| hypothetical protein UM05287.1 [Ustilago maydis 521]
Length = 1249
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 44/276 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q + K YD A L L S +DL
Sbjct: 2 KVLITGASGLLGRAVHQHCID---KGYDSKA---------LALTRSDPSKQLVKLDLTDT 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ + + L+ QPD++V+ AA P V E DP ++ +INV P+S+ L+S EN L
Sbjct: 50 AAVE-LCLREYQPDLIVHTAAERRPDVVEKDPAASHAINVDAPASIAT-LASQLENAP-L 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNFAILRSSIIYGP 180
L+++STD V++G K Y +D P+N YG SK+ E+ + + K F LR ++YG
Sbjct: 107 LVNISTDYVFDGSKPPYTVDDAPNPLNAYGVSKLQGERAVASHAKPGYFTNLRVPVLYGK 166
Query: 181 -------------QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
I P P S +Q D+ R P V+DV K IL
Sbjct: 167 TITNDESAVNVLLNAIQPPPGSTDLQKCDAYA------------VRYPTNVQDVAKAILK 214
Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI 263
L + + + + + +++ M V++ I
Sbjct: 215 LAEVHTDTSRPLPPITHFSAKEAMTKYDMCMVLSRI 250
>gi|310829176|ref|YP_003961533.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
gi|308740910|gb|ADO38570.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
Length = 288
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ R+ + G G LG L + L E D+ T DVD
Sbjct: 2 LENDRIWITGAEGQLGHTLYKTL---EDAARDILTTDK-------------------DVD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G A +PDV++NCAA++ + CE +P A +N + LS +
Sbjct: 40 VTDLDGIMQYA-DINRPDVIINCAAMADVKDCEEEPIQAYKVNALGA--RNLSIASRKIG 96
Query: 121 NLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+I +STD V+ G+ + Y E D PV VYGKSK+A E F+ E ++RSS IYG
Sbjct: 97 AKIIQISTDDVFGGMSQKTYTEFDTPEPVTVYGKSKLAGEGFVRELNPRHLVIRSSWIYG 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S + W+ + KGE E +D+ P ++ K I+ L
Sbjct: 157 QS------GSNFVFWVLEMARKGEPFEVPNDQVGSPTSAVELAKFIVRL 199
>gi|418467209|ref|ZP_13038101.1| putative 2-epi-5-epi-valiolone dehydratase/epimerase ScatO
[Streptomyces coelicoflavus ZG0656]
gi|371552177|gb|EHN79433.1| putative 2-epi-5-epi-valiolone dehydratase/epimerase ScatO
[Streptomyces coelicoflavus ZG0656]
Length = 324
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD VV S CE P A + +++ ++S +LI STD V++G
Sbjct: 65 RPDGVVLVHGPSDVTWCEEHPGEAEQAH--AAVAGNVASLAPGARVVLI--STDNVFDGS 120
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
E + P N YG++K+ AE+ + ++ +LR S++YG + P + +
Sbjct: 121 LPHNTESTPVRPANAYGRAKLRAEQILLATAADAVVLRVSLVYGHE---PAGAGKWLNFF 177
Query: 196 DSVLSK---GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
S + GE V D PV V DV ++ ++ L + +L++GGPDRV+
Sbjct: 178 ASCAHQLLLGEAVHAPDDHWTTPVTVSDVARVTASV----LFAPAPLPEVLHLGGPDRVT 233
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
R + A +A++ G L+ PV ++ R P + + T L L + PV DGV
Sbjct: 234 RAEWALTIADLLGAPRRLVVPVPKAAT-RYASRPENACLTSTSLPGLLGLIPV---DGV 288
>gi|448584430|ref|ZP_21647304.1| RmlD substrate binding domain superfamily protein [Haloferax
gibbonsii ATCC 33959]
gi|445728328|gb|ELZ79934.1| RmlD substrate binding domain superfamily protein [Haloferax
gibbonsii ATCC 33959]
Length = 218
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 8/203 (3%)
Query: 100 MSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAA 158
M+ V + L++ +++E +H STD V++G Y+E+ E AP+ YG+SK+A
Sbjct: 1 MAAAVNGTAPGDLAAVCDDREIPFVHYSTDYVFDGETDGLYEEDAETAPIQEYGRSKLAG 60
Query: 159 EKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV 218
E+ + E ++ +LR S +YG + + P QW+ S L+ G+ V F D+ P
Sbjct: 61 ERAVREVTADALVLRLSFVYGARGDTGDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRA 119
Query: 219 RDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASS 278
+V L L D + +V V+ + E+ G SLI+ +
Sbjct: 120 GNVATTTLELL------DAGVSGTYHVASQSAVTPSDFGAEICEVIGGDPSLIESSVMAD 173
Query: 279 VDRGVQSPADISMDITKLVQTLN 301
+DR P +D++K+ L
Sbjct: 174 LDRPAARPRRSCLDVSKVEGELG 196
>gi|160942044|ref|ZP_02089359.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC
BAA-613]
gi|158434935|gb|EDP12702.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC
BAA-613]
Length = 303
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VNCA L+ CE+ P+ A +N + LS ++ L+ +STD V++G
Sbjct: 58 RPHYIVNCAGLTDAAACEDCPEEAYRVNALGA--RNLSVAARMGKSRLVQMSTDDVFDG- 114
Query: 136 KSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+S Y E D ++P VYGKSK+A E F+ E C+ I+RSS I+G SP ++
Sbjct: 115 RSLVPYTEFDPVSPRTVYGKSKMAGENFVREFCNRHIIVRSSWIFGDG--SPY-----LE 167
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
I + +G+ + D+ P + I+ L ED L +V G SR
Sbjct: 168 RILEMAGQGKTIRAASDQMASPTGADGLAAKIIELMEH--GEDG----LYHVTGQGCCSR 221
Query: 254 VQMAEVVAEIRGYSTSLIKPVSAS 277
++A+ + GY ++PV+AS
Sbjct: 222 YELAKEAVRLAGYQVP-VEPVNAS 244
>gi|383639064|ref|ZP_09951470.1| DTDP-4-dehydrorhamnose reductase [Streptomyces chartreusis NRRL
12338]
Length = 307
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 35/275 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R LVVG +G++G L L+ + D A TP P D + H++V D+
Sbjct: 2 RTLVVG-SGFVGSALAGRLA----RAGDEAVLASRTP-PASPADGVVHAWVPLDITEDGA 55
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G AL+ + D VV S CE P+ A + + + N+ ++
Sbjct: 56 FGR---ALERVRADTVVLVHGPSDVTWCEEHPEEATHGH--AEAARQVVRAAGNRR--VV 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--PQT 182
+STD V++ E P N YG++K+AAE+ + E +LR S+IYG P T
Sbjct: 109 FISTDNVFDADAGAPDESVPPRPANAYGRAKLAAEQILAE-LPAVTLLRVSLIYGWEPAT 167
Query: 183 ISPVPKSLPIQWID------SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+ +W++ L GE+V D+ PV + DVV++ AL +
Sbjct: 168 ST--------KWLNFFASCVHRLRAGERVTAPFDQWTTPVLLDDVVEVTTAL-----ARA 214
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
+ LL++GGPDR+SR + A ++AE G S +L+
Sbjct: 215 ESPPRLLHLGGPDRLSRAEWAALIAEELGASPALV 249
>gi|222148116|ref|YP_002549073.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
gi|221735104|gb|ACM36067.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
Length = 301
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 34/305 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR LV G G + Q LL+ S+ K D+ A PQL DL
Sbjct: 5 KRYLVTGLAGQVVQSLLEKASD--RKDIDLVALGR----PQL--------------DLAD 44
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A L +PD++++ AA + E D +A ++N L+ + + +
Sbjct: 45 PATIEAAVLA-AKPDLIISAAAYTAVDQAETDEATAFTVNGEGP--GELARVAKALDIPI 101
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K S Y E D +AP+ VYG+SK+ E+ + + N AILR++ +Y
Sbjct: 102 IHISTDYVFDGSKASPYNEADPVAPLGVYGRSKLEGERRVAAETDNHAILRTAWVY---- 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-SEDKQMQL 241
SP K+ + + ++ E + D+ P D+ +L + + L S+ ++
Sbjct: 158 -SPFGKNFLLTMLRLAETRDE-LGVVADQIGNPTSALDIADAVLKVADNLLSSKAADLRG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYS---TSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
++ G S + A + + ++ + P+ AS+ + PA+ +D KL +
Sbjct: 216 TFHMTGTGEASWAEFAREIFRLSAEQNDPSAKVNPIPASAYPTPAKRPANSRLDCAKLAR 275
Query: 299 TLNID 303
ID
Sbjct: 276 VHAID 280
>gi|317027132|ref|XP_001400195.2| NAD dependent epimerase/dehydratase family protein [Aspergillus
niger CBS 513.88]
Length = 315
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 35/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S +P + A DL+
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCLVVGQGYSRAIPPTIQKA----------DLEKEE 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +PD A +NV ++ L+ T + LL++
Sbjct: 62 DIKNL-LNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVDATRT--LAEETARRGALLVY 118
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + + P N+YG+ K E + E + +LR ++YG
Sbjct: 119 ISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVLYG- 177
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
T +S +D+V S G K++ + R P DV ++ + +++ E
Sbjct: 178 -TAKENSESAVNTLVDAVYKAQDESAGVKMDDWA--LRYPTNTEDVARVCRDIVIKYVKE 234
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISM 291
+++Q L L DR+++ ++ E +A++ G S +++ + + VQ P D +
Sbjct: 235 RQRIQELPKILQFSSEDRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHL 294
Query: 292 DITKLVQTLNID 303
TK ++ L ID
Sbjct: 295 S-TKALKELGID 305
>gi|261868368|ref|YP_003256290.1| hypothetical protein D11S_1708 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415759782|ref|ZP_11481829.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|261413700|gb|ACX83071.1| hypothetical protein D11S_1708 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348654960|gb|EGY70458.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 294
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 35/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LG+ L + L ++ Y+V A S LD VF +D
Sbjct: 3 RLLITGAGGQLGRSLAKLL--VDNGRYEVLALDFSE------LDITNKDMVFSIID---- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F +P+V++N AA + E + SA S+NV V +L+ + ++
Sbjct: 51 --------SF-KPNVIINAAAYTSVDQAELEVSSAYSVNVRG--VQYLAEAAIRHNSAIL 99
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G KS YKE D I P+ VYGKSK E+ + ILR+S +G
Sbjct: 100 HVSTDYVFDGYKSGKYKETDIIHPLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + +L D+ P Y D+ +++ + + + + +
Sbjct: 160 NFVKTMLRLAKNRDILG------VVADQIGGPTYSGDIASVLIQIAEKIIVGETVKYGIY 213
Query: 244 NVGGPDRVSRVQMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS A E VA+ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 214 HFTGEPCVSWYDFAIAIFDEAVAQKVLEDVPLVNAITTADYPTLAKRPANSCLDLTKIQQ 273
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 274 AFGIQPSDWQRALK 287
>gi|383320424|ref|YP_005381265.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
gi|379321794|gb|AFD00747.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
Length = 288
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAPVN 149
CE + AM N V + + ++ + +LS+ V++G KS Y E D + P+N
Sbjct: 73 CEKNRLDAMEFNTRG--VRFFVEASLPLKSRVTYLSSAYVFDGRKSGGLYTEYDHVNPIN 130
Query: 150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH 209
VYG++K+ E + +K ++ LR +YG P + ++++ S L+ G+K+E
Sbjct: 131 VYGETKLMGEVAV-DKAADHLTLRLGEVYGSH-----PDNF-VKYVLSGLTYGQKIELAR 183
Query: 210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS 269
D P+Y+ DV + + L + + L N+ GP+R+S +M +A
Sbjct: 184 DMYFSPIYIEDVARAVSLLVK------ENIGGLYNLAGPERLSHYEMGVRIARAFDKDED 237
Query: 270 LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
L+ P+S + V+ P D+S+D +K+ + I V
Sbjct: 238 LLVPLSMEEMGFTVRMPKDLSLDASKISALIKIRGV 273
>gi|418047400|ref|ZP_12685488.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae JS60]
gi|353193070|gb|EHB58574.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae JS60]
Length = 287
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
D+VVNCAA++ E DPD+A ++N P ++ + + LIHLSTD V+ G
Sbjct: 48 DLVVNCAAIANVDTAEADPDTAYAVNTAGPENVAHACARVGAQ----LIHLSTDYVFSGE 103
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+ D AP+ VYG+SK+A E + + I+R+S +Y + V +
Sbjct: 104 QRHPYEVGDTAAPLGVYGRSKLAGELAVLAAMPDAHIVRTSWVYTGADGTDV-----VAV 158
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ + + VE D+ P YV+D+V + + + E +L+V +R
Sbjct: 159 LRRLAATDRTVEAVDDQIGSPTYVKDLVDALFEIGAGDIREP-----VLHVANDGACTRY 213
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
A V E G ++PVSA+ R PA
Sbjct: 214 DQARAVFEELGADPGRVRPVSAAQSARKAPRPA 246
>gi|223937614|ref|ZP_03629517.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
gi|223893777|gb|EEF60235.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
Length = 282
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 17/231 (7%)
Query: 67 FDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F+AV F + P +V++CAALS C+ +P A +N+ + L+ EN L
Sbjct: 43 FEAVKRAFTEQKPQLVIHCAALSKSPACQANPLLARKVNI--EVTKHLAGLAENIPFLF- 99
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G Y E + P++VY ++KVAAE+F+ N ++R+S+ G S
Sbjct: 100 -FSTDLVFDGRAGNYDEAAAVNPLSVYAETKVAAEEFVLGN-PNHTVIRTSLNGG---TS 154
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P + + G+ + F DE R P + I+ W Q L +
Sbjct: 155 PTGDRGFNEEMRRAWQAGKTLNLFTDELRSP------IPAIITARAVWELVSAQKPGLYH 208
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ G +R+SR Q+ EV+A + I+P S ++P D S++ K
Sbjct: 209 IAGSERMSRWQIGEVMAARWPHLHPKIQPGSLRDYQGAPRAP-DASLNCAK 258
>gi|149909225|ref|ZP_01897882.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36]
gi|149807749|gb|EDM67695.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36]
Length = 293
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G +GQ + I+ + +DV T T +D+ +
Sbjct: 3 RLLVTGQKGQIGQSIK---DRIDHQEWDVLLTDIET------------------LDITNA 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V F +P+VV+N AA + EN+ +A S+N + L+ N LLI
Sbjct: 42 AQVARVFKAF-KPNVVINAAAYTEVDKAENEAGAAESVNAYGPYL--LALQCHNVGALLI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H ST+ ++ G Y E D AP+NVYG++K+ E++I S++ I+R+S ++
Sbjct: 99 HFSTEYIFNGHSDCRYVETDTPAPLNVYGRTKLQGEQYIKTYLSHYIIIRTSWVFSEYAR 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-L 242
+ V L S+ + E + +D+ CP Y DV + L + ++E + QL
Sbjct: 159 NFVTTML------SLRREAEPIRIVNDQFGCPTYAGDVANLALDIAKERMAETNRYQLGE 212
Query: 243 LNVGGPDRVSRVQMA 257
N G VS A
Sbjct: 213 YNFCGDSEVSWFDFA 227
>gi|147678912|ref|YP_001213127.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum
SI]
gi|146275009|dbj|BAF60758.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum
SI]
Length = 296
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 33/310 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL++G +G +GQ L+ L ++ + TP +L P+ + ++
Sbjct: 7 QRVLIIGSSGTIGQALIPELKKLNAEII--------TPGHNILDITNPYQTKDYIHQVR- 57
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P +V+N AA + E + A IN L+ ++ ++ L
Sbjct: 58 -------------PSLVINAAAFTDVEKSEKEQLKAWKINAYGPLI--VAKICAEQQTPL 102
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD V+ G K Y EED P+NVYG +K A + F+ + I+R+S ++G
Sbjct: 103 VHFSTDFVFSGEKKQPYTEEDRFNPLNVYGTTKAAGDLFVSHVTDQYYIIRTSRLFG--- 159
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +Q I ++ ++ D+ C Y D+ K ++AL + +
Sbjct: 160 MGKSRRKDFVQRIIEAITSQPYLKIVDDQVACYTYSNDLAKWLIALF-----KTNARYGI 214
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N+ S + A + +++G S IKP+ + + P S+ K I
Sbjct: 215 YNLCNKGECSWYKFAREILKLKGLSFYKIKPIKTAEWPSLAKRPLYSSLSTKKFELVTGI 274
Query: 303 DPVTYKDGVK 312
P T+++ +K
Sbjct: 275 KPRTWQEALK 284
>gi|361127549|gb|EHK99515.1| putative Methionine adenosyltransferase 2 subunit beta [Glarea
lozoyensis 74030]
Length = 314
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 33/316 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +++ E +DV T L A P + + D+
Sbjct: 3 RTALITGATGLLGRQVVKAFERAE---WDVKGTG--------LTRAKPPTILKLDL---- 47
Query: 64 GSGFD-AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
GS D A ++ +P VVV+CAA P C+NDP+ ++NV +S L+
Sbjct: 48 GSEADVAKTIEDIKPSVVVHCAANRFPDKCDNDPEGTRALNVAASAS--LAKICAANSIF 105
Query: 123 LIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------ILRS 174
LI++STD V+ G + + Y+ P N+YG++K EK + + +LR
Sbjct: 106 LIYISTDYVFPGTEGDAPYEVTSTPNPPNLYGETKHEGEKAVLAELEKAGKQGWAVVLRV 165
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWL 233
++YG + P ++ + +DS+ E V H R P DV ++ + ++L
Sbjct: 166 PVLYG-EAEKPAESAVNVL-MDSIWKAQEGSVNMDHWALRYPTNTEDVGRVCQDIAAKYL 223
Query: 234 SEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPADIS 290
S + + L +L D+ ++ ++ E+ A+I G +K + + V+ P D
Sbjct: 224 STEDKTSLPKILQFSSEDKFTKYEICELFADIMGLPLDNMKANTEGNDPNASVKRPYDCH 283
Query: 291 MDITKLVQTLNIDPVT 306
+ ++ ++ L I+ T
Sbjct: 284 LS-SQALKDLGINVAT 298
>gi|448290185|ref|ZP_21481337.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
gi|445579257|gb|ELY33652.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
Length = 203
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 117 ENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+++E IH STD V++G FY+E DE AP+ YG+SK+ E + + + ILR S
Sbjct: 3 DDREIPFIHYSTDYVFDGETDGFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLS 62
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + + P QW+ S L+ G+ V F D+ P +V L L + +S
Sbjct: 63 FVYGARGDTSDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVATTTLELLDAGVSG 121
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+V V+ E + E+ G +LI+ + +DR P +D++
Sbjct: 122 ------TFHVASQSAVTPSDFGEKICEVIGGDATLIESSVMADLDRPAARPRRSCLDVSN 175
Query: 296 LVQTLNIDPVTYKDGVKLTLAA 317
+ L T +D + AA
Sbjct: 176 VEGELGCSQPTLEDDLAALEAA 197
>gi|350634965|gb|EHA23327.1| hypothetical protein ASPNIDRAFT_175387 [Aspergillus niger ATCC
1015]
Length = 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 35/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S +P + A DL+
Sbjct: 5 VLVTGATGLLGRQVFNTFKH---SGCLVVGQGYSRAIPPTIQKA----------DLEKEE 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +PD A +NV ++ L+ T + LL++
Sbjct: 52 DIKNL-LNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVDATRT--LAEETARRGALLVY 108
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + + P N+YG+ K E + E + +LR ++YG
Sbjct: 109 ISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVLYG- 167
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
T +S +D+V S G K++ + R P DV ++ + +++ E
Sbjct: 168 -TAKENSESAVNTLVDAVYKAQDESAGVKMDDWA--LRYPTNTEDVARVCRDIVIKYVKE 224
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISM 291
+++Q L L DR+++ ++ E +A++ G S +++ + + VQ P D +
Sbjct: 225 RQRIQELPKILQFSSEDRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHL 284
Query: 292 DITKLVQTLNID 303
TK ++ L ID
Sbjct: 285 S-TKALKELGID 295
>gi|295676079|ref|YP_003604603.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002]
gi|295435922|gb|ADG15092.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002]
Length = 307
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGK-PYDVAATHHSTPLPQLLLDALPHSFVFFDV--DL 61
+V V+GG+G LG+ L+ E+ G+ + + +T S P PQ+ V DV L
Sbjct: 3 KVAVIGGSGLLGRALID---ELAGQVDWHIVSTAFSRPSPQM---------VRLDVRDSL 50
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D V PD VV AA P VCE DP A ++NV + V ++S
Sbjct: 51 AVERFIDHVV-----PDAVVIAAAERRPDVCERDPAHARALNVDA--VQMIASAANRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ +STD V++G Y+ + AP+N YG+SK+ E+ + E +LR ++YGP
Sbjct: 104 WTLSISTDYVFDGKHPPYRHDSTPAPLNAYGQSKLEGERALIETAERGCVLRLPLLYGP 162
>gi|336472743|gb|EGO60903.1| hypothetical protein NEUTE1DRAFT_57815 [Neurospora tetrasperma FGSC
2508]
gi|350294014|gb|EGZ75099.1| NAD(P)-binding protein [Neurospora tetrasperma FGSC 2509]
Length = 338
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 38/327 (11%)
Query: 4 KRVLVVGGTGYLGQHL---LQGLS---EIEGKP---YDVAATHHSTPLPQLLLDALPHSF 54
K LV G TG LG+ + QGLS E+ K ++V T S
Sbjct: 10 KTALVTGATGLLGRQVVRAFQGLSVPTELSSKAGWTWEVKGTGFSRA----------DGV 59
Query: 55 VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
VDL+ + V L P V+V+CAA P + DP+ +NV + L+
Sbjct: 60 NVLKVDLEKEEEVERV-LGDVSPQVLVHCAANRFPDKVDADPEGTRLLNV--EVTRTLAR 116
Query: 115 FTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-- 170
++ LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S
Sbjct: 117 ACASRGILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKAGKE 176
Query: 171 ----ILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKI 224
++R ++YG +S +D+VL +G+KV+ H R P DV ++
Sbjct: 177 GLGVVMRVPVLYGKTEEGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRV 236
Query: 225 ILALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSV 279
+ ++LS E + +L G ++ ++ +M ++ AEI G I+ +
Sbjct: 237 CRDVAVKYLSTSEAERTSLPRILQFSGEEQYTKYEMCQLFAEILGVPVDNIEANTEGNDP 296
Query: 280 DRGVQSPADISMDITKLVQTLNIDPVT 306
+ VQ P D + TK ++ L ID T
Sbjct: 297 NASVQRPYDCHLS-TKALKDLGIDVST 322
>gi|428778940|ref|YP_007170726.1| dTDP-4-dehydrorhamnose reductase [Dactylococcopsis salina PCC 8305]
gi|428693219|gb|AFZ49369.1| dTDP-4-dehydrorhamnose reductase [Dactylococcopsis salina PCC 8305]
Length = 294
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD+++N A + E++P+ A ++N + + L+ E L H+STD V++G
Sbjct: 51 QPDIIINAGAYTSVDRAESEPELAHAVNSNAPTI--LAESAEKIGARLFHISTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D+ P+ VYG+SK E+ I C+N+ ILR++ +YG +
Sbjct: 109 KNKPYTEQDKTHPIGVYGRSKQGGEEGIKSHCNNYVILRTAWVYGVYGKG--------NF 160
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++L G E+++ D+ P + D+ K I+ L
Sbjct: 161 VKTMLRLGQEREELKVVFDQVGTPTWTNDIAKAIMGL 197
>gi|196232434|ref|ZP_03131287.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428]
gi|196223506|gb|EDY18023.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428]
Length = 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++++VG G LG LL+ E + +V + LLD S + +D
Sbjct: 3 RKIVIVGSGGRLGAALLREWRE---RGEEVVGFNRE------LLDLGDFSAIRERLD--- 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AL+F DV+VNCAA + CE +P+ A +N S V L+ K+
Sbjct: 51 -------ALEF---DVLVNCAAQTNVDRCECEPEEAFRVN--SGGVAALADVCTRKKARC 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K Y E+DE P++ YG+SK++ E+ + I+R S ++GP
Sbjct: 99 IHISTDYVFDGTKEKPYTEDDEPRPISKYGESKLSGERCLQAVSDRHLIVRVSWVFGPDR 158
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
S V Q I L++ ++VE D+ P Y D +++ L +
Sbjct: 159 ASFVD-----QIIQRALTQ-DRVEAIADKISVPTYTLDAARLLWPLVEQ 201
>gi|336421633|ref|ZP_08601789.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000104|gb|EGN30257.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium
5_1_57FAA]
Length = 282
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG+ PDV++NCAA++ VCE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGEINRPDVIINCAAVTDTDVCEREPELAFRVNALGA--RNLSIVARKVGAKMVQLST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ K+ Y E D+ P VYG+SK A E ++ E I+RS+ +YG Q + V
Sbjct: 103 DDVFDGLSKTPYSEFDDTNPKTVYGRSKRAGENYVKEFTHKHFIIRSNWVYG-QGNNFVT 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQLLLNV 245
K L +G + D+ P +D+ +IIL L TN + + + +
Sbjct: 162 KVL------DAADEGRTLAVASDQFGSPTSAKDLARIILYLIPTNEYGTYHATCKGV--- 212
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
SR + A+ + G SL K V S D + PA +D
Sbjct: 213 -----CSRYEFAQEILRFSGREGSL-KAVPTSESDLSSERPAYAVLD 253
>gi|110349046|gb|ABG73090.1| RfbD [Rhizobium leguminosarum bv. trifolii TA1]
Length = 295
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAGCRGFCAIGAP--VIHIST 101
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
+ V+ G ++F Y EED AP++VYG+SK+A E+ + N ILR++ +Y P
Sbjct: 102 EYVFSGDRAFAYSEEDATAPISVYGRSKLAGEEAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ + ++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRVVADPEPSLRGTF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ AE+ G T ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAELSKSGGRTVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKQSMAIVM 287
>gi|409396658|ref|ZP_11247638.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
gi|409118840|gb|EKM95231.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
Length = 303
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +PD+++N AA + E + + A ++N V E L L+H ST
Sbjct: 46 VRLLRPDLIINAAAYTAVDPAEREREQAFAVNARGPGV-----LAEEAARLGVPLVHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K S Y E+D P+ VYG SK+A E+ I ILR+S +Y S
Sbjct: 101 DYVFDGRKTSAYTEQDTPHPLGVYGASKLAGEQAIRAVAGEQLILRTSWVY-----SLHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
K+ + + +L + +++ DE P + R + + A+ RW + + L ++
Sbjct: 156 KNFLLT-MQRLLHERDEISVVADEIGAPTWARSIARTTAAMIRRWRDGQRPLDGLYHLSA 214
Query: 248 PDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S A +AE G + I P+ +S Q P + +D ++L Q ++
Sbjct: 215 EGETSWYGFACSIAEHLQNEGTLRARIAPIRSSDYPTAAQRPLNSRLDCSRLQQDWDL 272
>gi|307728806|ref|YP_003906030.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003]
gi|307583341|gb|ADN56739.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003]
Length = 297
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++VN AA + E D D+AM +N + V L+ + L+H STD V++G
Sbjct: 56 KPSLIVNPAAYTAVDKAETDVDAAMRLNAEAPAV--LAEEAKRLGAALVHYSTDYVFDGA 113
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P+NVYG+SK+A E+ I I R+S +YG + + + L +
Sbjct: 114 KDGAYVEGDRVNPINVYGRSKLAGEQAISAVGGAHLIFRTSWVYGMRGKNFLLTMLRLG- 172
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVV--------KIILALTNRWLSEDKQMQLLLNVG 246
++ E++ D+ P + + + I + W E + L + G
Sbjct: 173 -----AEREELSVVADQLGAPTWSNTIATSTAHVLSQAIASDGESWWREHSGVYHLTSGG 227
Query: 247 GPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
S AE + E+ + ++KPV AS+ PA+ SM KL +
Sbjct: 228 A---TSWHGFAEAIFEVSNLARKPVVKPVPASAYPTPASRPANSSMSNDKLAAAFGVRAP 284
Query: 306 TYKDGVKLTLAA 317
+++ ++L +AA
Sbjct: 285 DWREALQLCMAA 296
>gi|337285226|ref|YP_004624700.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus yayanosii CH1]
gi|334901160|gb|AEH25428.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus yayanosii CH1]
Length = 285
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 43/314 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V+G TG LG +++ LSE P + L H DVD+
Sbjct: 2 RVAVIGATGQLGSDIVEVLSED----------------PTFEVIPLTHD----DVDVTIP 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + +P+V++N AA E P+ A +N +L ++ E + +
Sbjct: 42 ESLKVI--ERIKPEVIINTAAYVRVDDSELYPEEAFKVNAIGALN--VAKIAEKINAVNV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K YKEED P+NVYG SK+ E F S ++R + +YG +
Sbjct: 98 YISTDYVFDGEKGKPYKEEDPPNPINVYGASKLMGEIFTRNYSSKHYVIRVASLYGRRGA 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ ++W+ +GEK++ +D+ P Y +DV LAL K ++++
Sbjct: 158 RGKGGNF-VEWVIEKARRGEKLKIVNDQLMSPTYTKDVA---LALA-------KFLKIMP 206
Query: 244 NVG-----GPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
G S + + + EI G+ ++P+S+ + R + P ++ + KL +
Sbjct: 207 EYGVYHMTNDGFCSWYEFTKAIFEILGWDVE-VEPISSEELGRLAKRPKFSALSVEKL-R 264
Query: 299 TLNIDPVTYKDGVK 312
++ I+ +K+ ++
Sbjct: 265 SIGIEMRHWKEALR 278
>gi|134057127|emb|CAK44415.1| unnamed protein product [Aspergillus niger]
Length = 324
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 35/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S +P + A DL+
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCLVVGQGYSRAIPPTIQKA----------DLEKEE 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +PD A +NV ++ L+ T + LL++
Sbjct: 62 DIKNL-LNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVDATRT--LAEETARRGALLVY 118
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + + P N+YG+ K E + E + +LR ++YG
Sbjct: 119 ISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVLYG- 177
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
T +S +D+V S G K++ + R P DV ++ + +++ E
Sbjct: 178 -TAKENSESAVNTLVDAVYKAQDESAGVKMDDWA--LRYPTNTEDVARVCRDIVIKYVKE 234
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISM 291
+++Q L L DR+++ ++ E +A++ G S +++ + + VQ P D +
Sbjct: 235 RQRIQELPKILQFSSEDRMTKYEICEKLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHL 294
Query: 292 DITKLVQTLNID 303
TK ++ L ID
Sbjct: 295 S-TKALKELGID 305
>gi|225163945|ref|ZP_03726235.1| dTDP-4-dehydrorhamnose reductase [Diplosphaera colitermitum TAV2]
gi|224801438|gb|EEG19744.1| dTDP-4-dehydrorhamnose reductase [Diplosphaera colitermitum TAV2]
Length = 314
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 124/303 (40%), Gaps = 47/303 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL V G H G IEG AA H F +DL
Sbjct: 26 RVLAVPGPA----HARAGFGPIEG-----AARH-------------------FTLDLAEP 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
VAL PD +VNCAA++ P CE DP + +NV L L+ + I
Sbjct: 58 GAVTTVALDL-FPDAIVNCAAIAEPARCEADPVLSQRLNV--ELPLELARVAHHMSARFI 114
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTI 183
H+S++QV++G + Y +P+N+YG+ K+ +E+ + F A++R+ ++ G
Sbjct: 115 HVSSEQVFDGTRPPYAIGSPPSPINLYGRQKLESERAVTHAAPEFAAVVRAPLLTGNSLT 174
Query: 184 S--PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L W + G F DE R P ++ +++L L R M+
Sbjct: 175 GTRSLHEKLFADW-----AAGRAPRLFADEFRQPCTAENLAEVLLELCER-----PAMRG 224
Query: 242 LLNVGGPDRVSRVQMAEVVA---EIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + G + +SR +A + ++ S LI A PAD+++ L
Sbjct: 225 VYHWAGAEVLSRHDIARRIRSHFKLNDKSAPLIAIKRADDPAASANRPADLTLLTKPLAG 284
Query: 299 TLN 301
L
Sbjct: 285 NLK 287
>gi|220932571|ref|YP_002509479.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168]
gi|219993881|gb|ACL70484.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168]
Length = 287
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKENLLIHLSTDQVYEG- 134
PD+V++C AL CE D A IN + V SS E K L+++ST V+ G
Sbjct: 50 PDIVIHCLALDDIEACERDKAMAFQINSYGAQNVAIASSMCEAK---LVYISTSHVFSGR 106
Query: 135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+E DE+ PVNVYG SK+ AE FI E F I+R+ +YGP S + K +
Sbjct: 107 LNRPYRESDELQPVNVYGLSKLLAENFIKEINRKFFIVRTGWLYGPGRDSLIGKLIET-- 164
Query: 195 IDSVLSKGEK-VEFFHDECRCPVYVRDVVKII 225
SK EK VE D P ++ D+ II
Sbjct: 165 -----SKQEKTVELPGDRYDTPTFIGDLAHII 191
>gi|345888284|ref|ZP_08839386.1| hypothetical protein HMPREF0178_02160 [Bilophila sp. 4_1_30]
gi|345040915|gb|EGW45130.1| hypothetical protein HMPREF0178_02160 [Bilophila sp. 4_1_30]
Length = 285
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++F PDV+ N + + E P A+S+N L +L + L+H S+DQV
Sbjct: 50 IEFINPDVIFNTVSWNTENPAEKQPQEALSVN--RGLPAFLGGLVKGTPRFLVHYSSDQV 107
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKS 189
+ G K S Y EED+ P+++ GKS++A E+ + E N I+R+ ++GP S + +
Sbjct: 108 FNGRKDSPYTEEDKADPISLCGKSRLAGEQALLELNADNICIIRTGWLFGPDGDSFLKRL 167
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
L ++G VE HD+ P Y +D+ + L L R
Sbjct: 168 L-----GQAKTEG-TVEVIHDQIGSPTYAKDLAQATLQLVKR 203
>gi|443705204|gb|ELU01859.1| hypothetical protein CAPTEDRAFT_100199 [Capitella teleta]
Length = 298
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 25/313 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M++ RVL+ G +G LG+ + +E + P ++ S +L V
Sbjct: 1 MTQTRVLITGASGLLGRAVY---AEFKRNPAWEALGLAFSRANEELR-----------RV 46
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL S V +F +P V+++ AA P V E+ P++A +NV ++ + ++
Sbjct: 47 DLGSEEEIGRVIQEF-KPQVIIHSAAEKRPNVVESQPEAAKRLNVDATA--HVCNYAAKV 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+I++STD V+EG+K +K +D P+N YGK K+ EK + ILR I+YG
Sbjct: 104 GAFVIYISTDYVFEGIKPPHKPDDPTNPLNAYGKWKLEGEKAAMLQHEGNLILRVPILYG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQ 238
I +S I ++ ++ K D E R P + DV ++ + + L D
Sbjct: 164 --DIESFGESA-ITYMFPMVKDSTKEFLVSDYEKRYPTHCADVAVVLRQMAEKKLQND-S 219
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + G + +++ M V+A++ IKP + G P + +D ++L
Sbjct: 220 FDGIFHWSGAEEMTKYDMCLVMADVFNLPKDHIKPDRTPTT--GAVRPYNAHLDSSRLED 277
Query: 299 TLNIDPVTYKDGV 311
T+K+G
Sbjct: 278 LGIGQRRTFKEGA 290
>gi|221213793|ref|ZP_03586767.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
gi|221166582|gb|EED99054.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 40/319 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V+GGTG +G L++ ++G VA P Q+L DL
Sbjct: 9 IIVLGGTGQVGFELVRA---VQGIGPIVA------PARQVL-------------DLSDLC 46
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ L+ P VV+N AA + E+D D+AM IN ++L + L+ LLIH
Sbjct: 47 AVESWILR-QNPLVVLNAAAYTAVDRAESDRDAAMRIN--AALPDTLARTCARIGALLIH 103
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G K Y E D+ AP+NVYG+SK+A E+ I E + AI R+S +YG + +
Sbjct: 104 YSTDYVFDGSKPDLYTESDDPAPLNVYGESKLAGERAIAEAAAPHAIFRTSWVYGNRGSN 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ L + ++ ++ D+ P + R + ++ + L +R +S Q N
Sbjct: 164 FMNTML------RLANERDRFRIVGDQIGAPTWSRTIAELTVHLLSRTVSNGAIDQEFWN 217
Query: 245 -------VGGPDRVSRVQMAEVV-AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ VS A + A R S +I + ++ + P + M KL
Sbjct: 218 RNSGVFHMCAEGEVSWAGFASAIFAHARPASQPVIDVIGSAQYPTPAKRPLNSRMSTAKL 277
Query: 297 VQTLNIDPVTYKDGVKLTL 315
T ++ + D + L
Sbjct: 278 CATFDLHVPNWSDALAWCL 296
>gi|150020962|ref|YP_001306316.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429]
gi|149793483|gb|ABR30931.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429]
Length = 285
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 34/308 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LGQ Q L + EG Y AT + +L + L F
Sbjct: 2 RILITGAYGQLGQDF-QKLFDKEGIEY--IATDNKEGYKKLDITNLDKVIEF-------- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A +K PDV++NCAA + E + A +IN S V L+ + L+
Sbjct: 51 ----AKKIK---PDVIINCAAYNAVDKAEEEWKVAYNINGLS--VRNLAIAASLNNSFLV 101
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G K Y D P++ YG+SK EK + + N+A++R+S ++G I
Sbjct: 102 HYSTDYVFDGRKGMPYTIYDTPNPLSKYGESKYLGEKLLSQFYDNYALIRTSWVFGKGNI 161
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ K I+W K EK+ DE P Y D+ K W +++ L
Sbjct: 162 NFAKKV--IEW----SKKYEKISLVIDEISAPTYTVDLAKAT------WEIIKYRVRGLY 209
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ SR + + E GY I+ + + P +D L +T+
Sbjct: 210 HISNERECSRYEYGRYILERIGYKGK-IEKAYQKDFNLPAKRPKYSKLDNFGLCETVGFK 268
Query: 304 PVTYKDGV 311
+K+ V
Sbjct: 269 MPDWKEAV 276
>gi|167038026|ref|YP_001665604.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116439|ref|YP_004186598.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856860|gb|ABY95268.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929530|gb|ADV80215.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 297
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D D+A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDRCESDIDTAFKVNAIGPRNL----AIAAQKVGAKLLHVSTDYVFS 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G S ++E D P++VYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGSVPFREYDIPQPISVYGKTKLLGEQYVREFCDKYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
+++ KG +E +D+ P D+ IL L L+++ + + G S
Sbjct: 174 TILNTAKEKG-YLEVVNDQRGNPTNAEDLAYHILKLV---LTDEYG---IYHCTGKGECS 226
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A + E G + +++ P+++ ++R + P S+D L T+ ++D +K
Sbjct: 227 WYDFACKIVEYAGINCTVV-PITSDKINRAAKRPFYSSLDNMMLRCTIGDRMRNWEDALK 285
Query: 313 L 313
+
Sbjct: 286 V 286
>gi|405362742|ref|ZP_11025795.1| dTDP-4-dehydrorhamnose reductase [Chondromyces apiculatus DSM 436]
gi|397090202|gb|EJJ21076.1| dTDP-4-dehydrorhamnose reductase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 300
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 12/238 (5%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ P+V+++CA+++ CE DP++A + NV ++ S+ L+H+ST
Sbjct: 55 ASAVEAAAPEVIIHCASMTEVDACEKDPEAAYAGNVTAAAAVARSARKAGAH--LVHVST 112
Query: 129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
D V++G Y E P VY +K E+ AI R++++YG PV
Sbjct: 113 DYVFDGDAGPYDEAAVPNPRGVYSVTKHMGEQAARVLAPGCAIARTAVVYG---WPPVEG 169
Query: 189 SLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L W+ + L KG++V F D+ P +V +++ L R L + N G
Sbjct: 170 RLNFGAWLVTALEKGQQVRLFEDQVVSPSLADNVAAMLMELGTRRLGG------VWNTCG 223
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
+ RV + E+ G+ LI P + + P + K+ L++ P+
Sbjct: 224 GAVIDRVGFGRALCEVFGFDAKLIVPTRMAELKLASPRPLKSGLRTDKVRAELSVPPL 281
>gi|171693893|ref|XP_001911871.1| hypothetical protein [Podospora anserina S mat+]
gi|170946895|emb|CAP73699.1| unnamed protein product [Podospora anserina S mat+]
Length = 317
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 33/317 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M K +V G TG LG+ +L+ + + + V T S +L VD
Sbjct: 1 MGGKTAVVTGATGLLGRQVLKAFANND---WTVKGTGFSRADGTDILK----------VD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + V L +P VVV+ AA P + DP+ ++NV + L+ +
Sbjct: 48 LTNADELKKV-LDDVKPQVVVHSAANRFPDKVDKDPEGTRALNVEAPRT--LARLCAERG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LL ++STD V+ G + Y+ E AP N+YG++K+ E+ + + +L
Sbjct: 105 ILLTYISTDYVFPGKPGDAPYENNAEPAPTNLYGQTKLEGERAVLHEFKMAGKEGLGVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG + +S +DSVL +G + H R P D+ +++ +
Sbjct: 165 RVPVLYG--SAKSNAESAVNVLMDSVLKAQQEGANINMDHWALRYPTNTEDIGRVLKDIA 222
Query: 230 NRWL--SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSP 286
++L S+ + +L D+ ++ ++ ++ AEI G IKP + + VQ P
Sbjct: 223 AKYLETSDRNSLPRILQFSSEDKYTKYEICQLFAEINGLPIDRIKPNTEGNDPNASVQRP 282
Query: 287 ADISMDITKLVQTLNID 303
D + TK ++ L ID
Sbjct: 283 YDCHLS-TKALKDLGID 298
>gi|226941909|ref|YP_002796983.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9]
gi|226716836|gb|ACO75974.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9]
Length = 294
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 136/326 (41%), Gaps = 45/326 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M R+L+ G G +G L + L+ PL ++L + + D
Sbjct: 1 MMPPRILLTGANGQVGFELRRALA----------------PLGEVL------AITRHEAD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTEN 118
L+ S + F +P ++VN AA + + E PD+A +N +P L W + +
Sbjct: 39 LQQPSSILPLLDAF-RPRLIVNAAAWTAVDLAEQQPDAAWQVNAVLPGVLAQWAA----D 93
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
++ L+H STD V++G+ S Y E D P++VYG+SK A E+ + I+R+S +
Sbjct: 94 RQARLVHYSTDYVFDGLASRPYDETDPAHPLSVYGQSKWAGEEAVRVAGGAPVIVRTSWV 153
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+G + + L + ++ E++ D+ P + + L W E
Sbjct: 154 FGAHGHNFLKTVL------RLAAEREQLAIVADQTGAPTPASLIADVTAHLVRHWPDEGA 207
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL------IKPVSASSVDRGVQSPADISM 291
L G + EVV R SL I+P++ S PA+ +
Sbjct: 208 TYHL---AGQGETSWHGYACEVVRIARALGWSLRATETAIRPIATSDYPLPAVRPANSRL 264
Query: 292 DITKLVQTLNIDPVTYKDGVKLTLAA 317
D K+ L + ++ GV+ LA+
Sbjct: 265 DCRKIQADLQLWLPDWQSGVRQVLAS 290
>gi|91782662|ref|YP_557868.1| NAD dependent epimerase/dehydratase [Burkholderia xenovorans LB400]
gi|91686616|gb|ABE29816.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
Length = 306
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 16/176 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G +G LG+ L L++ G + VAAT S P P + +D++
Sbjct: 3 KVAVIGASGLLGRALADELAQQPG--WQVAATAFSRPAPGRIA-----------LDIRDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ PD +V AA P VCE+DP A ++NV + V L++ + +
Sbjct: 50 QAVEQF-VEREAPDALVIAAAERRPDVCEHDPALARALNVDA--VRTLAAAANRRGAWTL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+STD V++G Y+ + AP+N YG SK+ E+ + E +LR ++YGP
Sbjct: 107 SISTDYVFDGTHPPYQHDSVPAPLNAYGHSKLEGERALTESTDLGCVLRLPLLYGP 162
>gi|325970226|ref|YP_004246417.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
gi|324025464|gb|ADY12223.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G G LG L + L E AT LP + V DVD +
Sbjct: 3 ILITGAHGQLGNELQKILEE---------ATSERGKLPLFYERS---RIVAVDVDELDIT 50
Query: 66 GFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN 121
DAV F +P++ NCAA++ CE + D+A +N P +L + E
Sbjct: 51 SSDAVDAFFSVHKPNLAFNCAAMTNVDGCEGNEDAAYLVNAVGPKNL----ALACERHGA 106
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V++G+ + Y E DE AP YG+SK+A E+F+ C N I R++ +YG
Sbjct: 107 RLMHISTDYVFDGLGTRPYVETDETAPNTAYGRSKLAGEQFVLASCRNSCICRTAWLYG 165
>gi|444909352|ref|ZP_21229543.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
gi|444720301|gb|ELW61085.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
Length = 311
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 33/277 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VL++G +G++GQ L + L + G +++ H L Q L + +
Sbjct: 2 RHVLIIG-SGFIGQRLGRALRD-AGLEVTLSSRHWPPGLGQEPWRCLDATRPGAIAEAVG 59
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+G AV L G D+ CE+ P++AM+ + + + L + +L
Sbjct: 60 ATGAHAVVLVHGPSDITG----------CESAPEAAMATH--AGIAARLCQEAPSVRKVL 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I STD V++G + Y E P N YG++K+AAE + ++R+S++YG +
Sbjct: 108 I--STDNVFDGQDTSYDESRSPNPANAYGRAKLAAEHVLLSADPGALVVRTSLVYGYE-- 163
Query: 184 SPVPKSLPIQW------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
P+ W + + G+ V+ D P+ V D ++ L
Sbjct: 164 ---PQGPGRGWRNFFMVVAEAVRAGQPVQAPVDHWNTPILVDDAAAVLARLI------PG 214
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPV 274
+ LL++ GPDR SR + +++A G L++PV
Sbjct: 215 RQAGLLHLAGPDRASRFEWGQLIARSLGQDPGLVRPV 251
>gi|375148224|ref|YP_005010665.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
gi|361062270|gb|AEW01262.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
Length = 292
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 38/321 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDV 59
MS+ +LV G G +GQ L ++L + P +FVF D
Sbjct: 1 MSQPVILVTGANGQVGQEL------------------------RVLSASYPAFTFVFTDA 36
Query: 60 DLKSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D + + V F +P +NCAA + E + + A ++N V L++ +
Sbjct: 37 DSMPVNKEEVVQQMFAAHRPAYCINCAAYTAVDKAETEQELAFAVNAEG--VRILAAACK 94
Query: 118 NKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
N IH+STD V+ G + YKE+ P NVYG +K+ E+ E I+R++
Sbjct: 95 NYNTRFIHISTDYVFNGQSPTPYKEDAPTGPENVYGVTKLKGEQLCREVNPESVIIRTAW 154
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL-TNRWLSE 235
+Y S K+ ++ + ++ + + +D+ P Y D+ ++ + N S
Sbjct: 155 VY-----SSFGKNF-VKTMMKLMQERPAISVVNDQVGAPTYAADLAACMMQIVANTNTSA 208
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ + R+S A + E+ G ST + P+ + + P+ +D +K
Sbjct: 209 ANWHPGMYHYSNQGRISWFDFAVGIKELTG-STCTVNPIPSKQFPTPAKRPSFSLLDTSK 267
Query: 296 LVQTLNIDPVTYKDGVKLTLA 316
+ QT NI +K+ +K +A
Sbjct: 268 IRQTFNIAIPEWKESLKKCVA 288
>gi|421140696|ref|ZP_15600693.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens BBc6R8]
gi|404508150|gb|EKA22123.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens BBc6R8]
Length = 293
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + + F E + L LIH STD V+
Sbjct: 54 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGI-----FAEEAKALGIPLIHYSTDYVF 108
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 109 DGSKAAPYNEDDATNPLGVYGASKLAGEQAIAAVGGEHLILRTSWVY-----STHGKNFL 163
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + AL RW + + ++
Sbjct: 164 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIANSTRALIERWQAGQAGDWGVYHLTAQGET 222
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E G + + ++ + +S+ + P + +D ++L Q ++ +
Sbjct: 223 SWFGFAQAIGEQLRANGRACAELEAIPSSAYPTPARRPLNSRLDCSRLQQQWHVSQPQWH 282
Query: 309 DGVKLTLAAE 318
D ++ LA +
Sbjct: 283 DALRECLAEQ 292
>gi|395797221|ref|ZP_10476512.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Ag1]
gi|395338645|gb|EJF70495.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Ag1]
Length = 289
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + + F E + L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGI-----FAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKAAPYNEDDATNPLGVYGASKLAGEQAIAAIGGEHLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + AL RW + + ++
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIANSTRALIERWQAGQAGDWGVYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E G + + ++ + +S+ + P + +D ++L Q ++ +
Sbjct: 219 SWFGFAQAIGEQLRANGRACAELEAIPSSAYPTPARRPLNSRLDCSRLQQQWHVSQPQWH 278
Query: 309 DGVKLTLAAE 318
D ++ LA +
Sbjct: 279 DALRECLAEQ 288
>gi|226291193|gb|EEH46621.1| NAD dependent epimerase/dehydratase family protein
[Paracoccidioides brasiliensis Pb18]
Length = 323
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 20/310 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VL+ G TG LG+ +L E + + S P A DL
Sbjct: 3 RTVLITGATGLLGRQVLNAF-ERDSLNWKTIGQGFSRAGPGTA--ASDTDAEIIKADLTD 59
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S A+ L +P VVV+CAA P C+ D D+A INV ++ L+ T + LL
Sbjct: 60 ESEIVAL-LDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAAT--KSLARETSARSILL 116
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ +LR ++Y
Sbjct: 117 IYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQSGLGVVLRVPVLY 176
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
GP + S V + W ++ G K++ + R P + DV ++ + ++L +
Sbjct: 177 GPTKQNSESAVNVLVDAVWKAQDVNAGIKMDDW--AIRYPTHTADVGRVCHDIAVKYLGD 234
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
++ ++ L L DR+++ ++ + +AEI G + PV VQ P D +
Sbjct: 235 EEDVKALPRILQFSSEDRMTKYEICQKLAEILGLPLPGMIPVKEGPKPGEVQRPYDTHLS 294
Query: 293 ITKLVQTLNI 302
T+ +Q + I
Sbjct: 295 -TRELQRIGI 303
>gi|148658677|ref|YP_001278882.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1]
gi|148570787|gb|ABQ92932.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1]
Length = 282
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 31/266 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG+G+LG L++ L+ +G +DV AT HS PQ + +DL++
Sbjct: 7 RLLITGGSGFLGARLVE-LALAQG--WDVVATCHSR-RPQT------PGVRWETLDLRNA 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + + PDVV++ A + PD I S+ V + + + LI
Sbjct: 57 AATRRLVEQV-TPDVVIHTAYR------QEGPDMMAIIGEGSAAVAQGAFAVQAR---LI 106
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLS+D V++G + Y E DE PV YG +K +E+ + I+R+S+IYG
Sbjct: 107 HLSSDVVFDGERIGRYTETDEPQPVTTYGAAKALSERLVAAAHPGALIVRTSLIYG---- 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P +++ VL + FF DE RCP+ V D+ +L L + D+ ++
Sbjct: 163 GPDRPGRHERFVLDVLDGRAEAVFFTDELRCPIEVGDLAAALLELA----TIDRSG--IV 216
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTS 269
+V G D VSR + A +VA G S
Sbjct: 217 HVAGSDVVSRYEFACLVARAFGRDPS 242
>gi|392394625|ref|YP_006431227.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525703|gb|AFM01434.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 324
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 29/277 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGL--SEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDVDL 61
+VLV GG G++G HL++ L IE D + S + H V F +D+
Sbjct: 2 KVLVTGGAGFIGSHLVESLVCQGIEVSIIDNLVSGQS---------CMSHPLVAFHHMDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S AV ++ +PDVV + AA + R DP +N+ + +N L + E K
Sbjct: 53 CSRDA-KAVIIR-EKPDVVFHLAAQTDVRKSLQDPQYDAKVNICGT-INLLEACREAKVR 109
Query: 122 LLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAILRSSI 176
LI ST VY + K EED +AP++ YG SK AAE +I + + ++ ILR S
Sbjct: 110 KLIFTSTSAVYGDLHKEPISEEDPVAPISYYGLSKWAAESYILLFHQLYGISYTILRFSN 169
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLS 234
+YGP I+ + ++D + +K + + D + R VYV+DVV+ I A R
Sbjct: 170 VYGPGQIAKGEGGVVAVFLDHIHAK-KTLNIHGDGAQTRDFVYVKDVVRAIQAAVERGDQ 228
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
E ++ V + S Q+ +++ I G + +I
Sbjct: 229 E------IIQVSSSGKTSVNQLVSMLSRIHGSAFEII 259
>gi|153853088|ref|ZP_01994497.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814]
gi|149753874|gb|EDM63805.1| dTDP-4-dehydrorhamnose reductase [Dorea longicatena DSM 13814]
Length = 282
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG +PDV++NCAA++ +CE +P+ A +N + LS ++ +ST
Sbjct: 45 LNFGVINRPDVIINCAAVTDTDLCEKEPELAYRVNALGA--RNLSIVARKTGAKMVQIST 102
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G++ Y E D+ P VYG+SK A E ++ E ILRS+ +YG
Sbjct: 103 DDVFDGIRHTPYTEFDDTNPKTVYGRSKRAGENYVKEFTHKHFILRSNWVYGNGN----- 157
Query: 188 KSLPIQWIDSVLSKGE-KVEFF--HDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQLL 242
+++ VL + K E D+ P +D+ +IIL L TN + + Q +
Sbjct: 158 -----NFVNRVLHAADTKDELLIASDQFGSPTSAKDLARIILYLIKTNEYGTYHATCQGV 212
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
N R + A+ V ++ G +L +PV S D PA +D
Sbjct: 213 CN--------RYEFAQEVLKLAGKRITL-RPVVTSESDLSSTRPAYAVLD 253
>gi|161523066|ref|YP_001585995.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|189348108|ref|YP_001941304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|160346619|gb|ABX19703.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|189338246|dbj|BAG47314.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
Length = 333
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 22/298 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV+G +G LG+ ++ L+ + +A + LL P DV
Sbjct: 13 VLVIGASGLLGRAVVASLAR-DPAFATIATIRNRDTRGARLLALPPDKIAILDV------ 65
Query: 66 GFDAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 66 -LDRPALERAFDLYRPAAVVVCAAERRPNVCERDPAGARAINVDAP--ARIGALAARYGA 122
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 123 WTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPI 182
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ S V +P + S + + V R P Y DV +I L +R L+
Sbjct: 183 ADWSESAVTSLVP-AIVASARAGADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAGASV 241
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + + G + +++ ++A+ +A+ G SL P+ + P D +D +L
Sbjct: 242 LG-IRHWSGDEAMTKYEIAQRIADALGLRASL-APIDTPA--DATPRPYDCHLDAAQL 295
>gi|374600672|ref|ZP_09673674.1| dTDP-4-dehydrorhamnose reductase [Myroides odoratus DSM 2801]
gi|423325722|ref|ZP_17303562.1| dTDP-4-dehydrorhamnose reductase [Myroides odoratimimus CIP 103059]
gi|373912142|gb|EHQ43991.1| dTDP-4-dehydrorhamnose reductase [Myroides odoratus DSM 2801]
gi|404605523|gb|EKB05112.1| dTDP-4-dehydrorhamnose reductase [Myroides odoratimimus CIP 103059]
Length = 282
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 47/319 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH-SFVFFDVDLKS 63
++LV G TG LG SEI+ L PH FVF D L
Sbjct: 2 KILVTGSTGQLG-------SEIKN-----------------LEKFYPHYKFVFMDRTLMP 37
Query: 64 GSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + V L+ QPD ++N A + E++ + A +N V L ++E +
Sbjct: 38 LNDINKVWEVLESEQPDYIINAGAYTAVDKAESEEELADMVN--HQCVRVLGVWSEKNKA 95
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI---I 177
LIH+STD V++G S EE + AP+NVYG +K+ E + + ++R+S I
Sbjct: 96 HLIHVSTDYVFDGTSSLPLTEEAQTAPINVYGNTKMKGEVALMTVHHDAIVIRTSWVYSI 155
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG + + + ++ + E + D+ P Y D+ I+ + N + +
Sbjct: 156 YGNNFVKTMCR---------LMQERESINVVLDQIGSPTYAADLASTIMQIINGNIWKGG 206
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + +S + EI+G+ + P+++S + PA +D +K+
Sbjct: 207 ----IYHYSNEGEISWYDFTRKIKEIKGFECD-VNPINSSDFPTSAKRPAYSLLDKSKIK 261
Query: 298 QTLNIDPVTYKDGVKLTLA 316
+ NI+ + + +++ LA
Sbjct: 262 KEYNINVSQWDESLRIMLA 280
>gi|381400853|ref|ZP_09925772.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae PYKK081]
gi|380834137|gb|EIC13986.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae PYKK081]
Length = 308
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 142/316 (44%), Gaps = 38/316 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K + L+ G G +G L+ ++++GK D+ A +T LD VF
Sbjct: 16 KMKYLITGANGQVGNQLV---AQLQGKA-DIFAADRAT------LDITNRETVF------ 59
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A + +PD+++N AA + E++PD A +IN + L+ + +
Sbjct: 60 -------QAARTFRPDIIINAAAHTAVDKAESEPDLAHAINCTGA--ENLALAAQEVGAI 110
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++H+STD V++G ++ Y+E D +AP + YGKSK+A E+ + C+ ILR++ ++G
Sbjct: 111 VLHISTDYVFDGKGETAYRETDPVAPQSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEH 170
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS-EDKQMQ 240
+ V L + + + + D+ P Y D+ ++A+ + ++ +D ++
Sbjct: 171 GNNFVKTMLRLG------ASRDTLGVVADQFGSPTYAGDIAAALIAMAEQIVNQQDSKLF 224
Query: 241 LLLNVGGPDRVSRVQMA-EVVAEIRGYSTSLIKP----VSASSVDRGVQSPADISMDITK 295
+ + G VS A E+ A+ P ++ + PA+ +D K
Sbjct: 225 GVYHFSGSPYVSWHGFASEIFAQTAAQGVLTKSPTLNAITTADYPTPAMRPANSRLDCGK 284
Query: 296 LVQTLNIDPVTYKDGV 311
+ I P ++ +
Sbjct: 285 VQAAFGIAPSNWRKAL 300
>gi|169776059|ref|XP_001822496.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
oryzae RIB40]
gi|83771231|dbj|BAE61363.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 323
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 30/309 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S P +L A DL++
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCFVVGQGYSRANPPTILKA----------DLENKD 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P ++++CAA P +CE DP+ A +NV ++ L+ ++ LI+
Sbjct: 62 DIQRI-LDEAKPQIIIHCAANRSPDLCEQDPEKARRVNVEATRT--LAEEASSRGAFLIY 118
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + E P N+YG+ K E + E +LR ++YGP
Sbjct: 119 ISTDYVFPGKEGEAPYETDAETNPPNLYGQLKRDGEVAVLEATKETGLGLVLRVPVLYGP 178
Query: 181 ---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+ S V + W K++ + R P DV ++ + +++ E
Sbjct: 179 SDNNSESAVNCLIDAVWKSQTPESSVKMDDWAQ--RYPTNTEDVARVCRDIVIKYIKERT 236
Query: 238 ---QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
Q +L DR+++ ++ E AE+ G + + GVQ P D + T
Sbjct: 237 RLPQQPHILQFSSEDRMTKYEICEKFAEVLGLPLDRMIRNKQGNEPGGVQRPYDTHLS-T 295
Query: 295 KLVQTLNID 303
K ++ L ID
Sbjct: 296 KGLKDLGID 304
>gi|221198982|ref|ZP_03572027.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M]
gi|221205242|ref|ZP_03578258.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2]
gi|221175033|gb|EEE07464.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2]
gi|221181433|gb|EEE13835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
++G +G LG+ ++ LS + +A + LL P DV
Sbjct: 1 MIGASGLLGRAVVASLSR-DPAFATIATIRNRDTRGARLLAPPPDKIAMLDV-------L 52
Query: 68 DAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 53 DRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPAR--IGALAARYGAWT 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP--- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 111 LGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIAD 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ S V +P + S + E V R P Y DV +I L +R L+ +
Sbjct: 171 WSESAVTSLVP-AIVASARAGAEAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA-GASVV 228
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + G + +++ ++A+ +AE G SL P+ + P D +D +L
Sbjct: 229 GIRHWSGDEAMTKYEIAQRIAEAMGLHASL-APIDTPA--DATPRPYDCHLDAARL 281
>gi|222445607|ref|ZP_03608122.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii
DSM 2375]
gi|222435172|gb|EEE42337.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2375]
Length = 280
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 41/310 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G LG L+ L++ +++ T T L + H+ F
Sbjct: 2 KVLITGSNGMLGHDLIDVLND----KHELILTTSKT----LDITDKEHTVEF-------- 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PD+V+N AA + CE + + A S+N V L+ + L+
Sbjct: 46 -------IKENKPDIVINSAAYTDVDGCEENRERAFSVN--GEGVRNLAIGCREADCPLV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG
Sbjct: 97 HISTDYVFNGKNDTPWVEDDEIGPISVYGKSKLEGEQAIQEILDKFFIVRTAWLYGVNG- 155
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
PK++ + +++ +DE P Y D+ + I L + +
Sbjct: 156 GNFPKTML-----ELAKTHDELTVVYDEIGTPTYTPDLAEAIGKLI------ETDYYGIY 204
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ S + A+ + EI G + PV+AS R P+ ++ K V +
Sbjct: 205 HITNSGNCSWCEFAKYIFEIAGVDVK-VTPVTASEFARPAPRPSYSVLNNKKWVDN-GFE 262
Query: 304 PV-TYKDGVK 312
P+ +YK+ +K
Sbjct: 263 PLRSYKEAIK 272
>gi|149925746|ref|ZP_01914010.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105]
gi|149825863|gb|EDM85071.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105]
Length = 337
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 141/354 (39%), Gaps = 94/354 (26%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV+G G LG + Q H+ P +DA + + D
Sbjct: 26 RVLVLGAQGQLGHTIGQ----------------HAKPALMETMDAC----ISYGRDKADL 65
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S D + ALK +PDVV+N AA + E + + A +IN + V L+ + +
Sbjct: 66 SKLDTLINALKDIRPDVVINAAAYTNVEKAETETELAHTINAKA--VGILAEQCKKQGVA 123
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD V++G S Y E D P++ YGKSK+ EK++ E N+ + R+S +YG +
Sbjct: 124 LVHYSTDYVFDGKASQPYTETDATNPLSAYGKSKLEGEKYLKEVGGNWVVFRTSWVYGQR 183
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV---RDVVKIILALTN-----RWL 233
++ CR + + RD +K++ T WL
Sbjct: 184 G--------------------------NNFCRTMIKLAQERDTLKVVDDQTGAPTPANWL 217
Query: 234 SE-------------DKQMQLLLNVGGPDRVSRVQMAEVV-AEIRGYSTSL--------- 270
+E K M L PD S + E+ A G +T
Sbjct: 218 AELGLTVAGVVAMHRYKTMGKLAPTFLPDFPSEIPSGEIFHASAAGVTTWFDYACLAIEN 277
Query: 271 ------------IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
I+ S SS++ Q PA +D TKL+ T ++P + GV+
Sbjct: 278 AHKQGIVQRMPNIERASTSSMNFAAQRPAYSVLDNTKLMNTFRVNPPEWTKGVR 331
>gi|421480255|ref|ZP_15927893.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
CF2]
gi|400221449|gb|EJO51905.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
CF2]
Length = 330
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 22/298 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV+G +G LG+ ++ L+ + +A + LL P DV
Sbjct: 13 VLVIGASGLLGRAVVASLAR-DPAFAAIATIRNRDTRGARLLALPPDKIAILDV------ 65
Query: 66 GFDAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D AL+ +P VV CAA P VCE DP A +INV + + + +
Sbjct: 66 -LDRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAP--ARIGALAAHYGA 122
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 123 WTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPI 182
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ S V +P + S + + V R P Y DV +I L +R L+
Sbjct: 183 ADWSESAVTSLVP-AIVASARAGADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAGASV 241
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + + G + +++ ++A+ +A+ G SL P+ + P D +D +L
Sbjct: 242 LG-IRHWSGDEAMTKYEIAQRIADALGLRASL-APIDTPA--DATPRPYDCHLDAAQL 295
>gi|428777837|ref|YP_007169624.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
gi|428692116|gb|AFZ45410.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
Length = 294
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 37/228 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L Q L +G+ L AL D+DL +
Sbjct: 3 KILLTGKNGQLGQDL-QPLLRQQGE-----------------LIALGKE----DLDLSNL 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V +K +PD+++N A + E++PD A ++N + V L+ E L
Sbjct: 41 NQIRDV-IKTQKPDLIINSGAYTAVDQAESEPDLAQTLNGDAPRV--LAECAEQIGARLF 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K+ Y EED+ P+ VYG+SK+A E I C N+ ILR++ +YG
Sbjct: 98 HISTDYVFDGEKNQPYTEEDQPNPIGVYGQSKLAGEVGIQNNCQNYVILRTAWVYGTYGK 157
Query: 184 SPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
++ ++L G E+++ D+ P + D+ + ++ L
Sbjct: 158 K--------NFVKTMLRLGAEREELKVVSDQVGTPSWTYDIAQAVVGL 197
>gi|158333988|ref|YP_001515160.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017]
gi|158304229|gb|ABW25846.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017]
Length = 304
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 39/245 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-LPHSFVFFDV 59
M+K R+L++G G LGQ L + L + G+ V +P+ L +A LP
Sbjct: 1 MAKSRILLLGAQGQLGQELQKTLPTM-GELIAVGKETVDLAVPEQLHEAILP-------- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD++VN AA + E++ A ++N + V L+ +
Sbjct: 52 ---------------VQPDIIVNAAAYTAVDRAESEVKLAHTVNQKAPTV--LAELAQTL 94
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LLIH+STD V++G +S Y E D P +VYG SK E+ I + ILR++ +Y
Sbjct: 95 GALLIHISTDYVFDGTQSHPYTESDAPHPQSVYGHSKWQGEEGIRQTWDQHIILRTAWVY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G Q ++ ++L G + V D+ P + +++ I +L + W +
Sbjct: 155 GTQGKG--------NFVKTMLRLGRERSDVRVVDDQVGTPTWAKEIGDAIASLIHHWSTS 206
Query: 236 DKQMQ 240
D Q
Sbjct: 207 DPVTQ 211
>gi|332705309|ref|ZP_08425387.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
gi|332355669|gb|EGJ35131.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
Length = 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 37/319 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G TG +GQ L LS PL Q++ D+DL
Sbjct: 2 KKILLTGITGQVGQELEDTLS----------------PLGQVI------GVGRSDMDLAE 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PDV+VN AA + E + A SIN + + ++ +N +L
Sbjct: 40 PESIRQVIHQI-KPDVIVNAAAYTAVDKAETELALAKSINAVAPTI--MAEEAQNLGAIL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G K+ Y E+D P+ YGKSK+ E+ + +KC ILR++ +YG +
Sbjct: 97 LHISTDYVFDGKKNTPYTEQDTPNPIGSYGKSKLQGEEGVQQKCDRILILRTAWVYGTRG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
K++ + ++ E++ D+ P + +D+ I L + + + +
Sbjct: 157 HGNFVKTML-----RLGAEREELRVVADQVGTPTWAKDIAVTITQLLQA-MDSNPMLGGI 210
Query: 243 LNVGGPDRVSRVQMAEVV---AEIRGYSTSLIK--PVSASSVDRGVQSPADISMDITKLV 297
+ S A + A++ G+ L + P++ Q PA + K+
Sbjct: 211 YHFTNTGVTSWYDFAVAIFEEAKLLGFPLKLQRVVPITTPEYPTPAQRPAYSVLSNQKIS 270
Query: 298 QTLNIDPVTYKDGVKLTLA 316
QTL P ++ ++ LA
Sbjct: 271 QTLGSYPPHWRQSLRQMLA 289
>gi|431932248|ref|YP_007245294.1| dTDP-4-dehydrorhamnose reductase [Thioflavicoccus mobilis 8321]
gi|431830551|gb|AGA91664.1| dTDP-4-dehydrorhamnose reductase [Thioflavicoccus mobilis 8321]
Length = 301
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 145/315 (46%), Gaps = 31/315 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G G +G L + L+ PL +++ ++ + VDL
Sbjct: 10 RLLLIGANGQVGWELRRTLA----------------PLGRVVTASIEDG-TDYRVDLADS 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ +PD VVN AA + E + A IN + L + ++ +I
Sbjct: 53 ESVSRL-IRETRPDAVVNAAAYTAVDKAETEKVIAERINADAP--GMLGALLKDSGIPII 109
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V+ G +S Y+E+D P+NVYG +K+ E+ + +N ILR++ IYG +
Sbjct: 110 HYSTDFVFAGDQSLPYREDDPTGPLNVYGATKLEGERRLLASGANAVILRTAWIYGAR-- 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED---KQMQ 240
S + + + ++ +++ D+ P + R + ++ + +R L D ++++
Sbjct: 168 ----GSNFLLTMRRMFAERDELRIVRDQVGSPTWSRMLAEVTSLVLHRLLVGDLDVERVK 223
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ +V G + S A + RG L+ P+++S + PA +D TK+ +T
Sbjct: 224 GVYHVTGAGQTSWYDFACAILGSRGEQCRLL-PITSSEYPAPAKRPAYAVLDNTKIWETF 282
Query: 301 NIDPVTYKDGVKLTL 315
+ ++ ++L L
Sbjct: 283 GVQLPDWRQSLRLCL 297
>gi|123410516|ref|XP_001303722.1| dTDP-4-dehydrorhamnose reductase [Trichomonas vaginalis G3]
gi|121885122|gb|EAX90792.1| dTDP-4-dehydrorhamnose reductase, putative [Trichomonas vaginalis
G3]
Length = 285
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 50/301 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV GG+G+LG+ L+ LS K Y V A H ++DL
Sbjct: 2 KTILVTGGSGFLGRRLVSHLS----KNYTVVAPTHG------------------ELDLTD 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ K P ++++ AA+S +CE +P+ + SIN+ + +L+ + L
Sbjct: 40 REKIISEVTKI-NPQIIIHTAAISNTGLCEQNPELSESINLNGT--KYLAEAASKINSKL 96
Query: 124 IHLSTDQVYEG--VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-P 180
I S+DQ+Y G K E+ ++ PVNVYGK K+ AE+ + E LR + +Y P
Sbjct: 97 IFCSSDQIYNGNAEKGPLSEDIDVHPVNVYGKHKLEAERKLQEILPTSVSLRLTWMYDHP 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ P K+LPI ++ +K + V F +E R +V +VV+ I +K
Sbjct: 157 SSKIPQHKNLPIMLLE---AKEKNVPFVTTVNEYRAITFVGEVVENI----------EKT 203
Query: 239 MQL---LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+L + N G + + + + +A+I +L++ + +R +ISM+I K
Sbjct: 204 FELPGGVYNYGASNTSNSYETYKEIAKIMDVPENLVE----NDTNRFKAQARNISMNIQK 259
Query: 296 L 296
+
Sbjct: 260 I 260
>gi|306820758|ref|ZP_07454384.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402310376|ref|ZP_10829342.1| dTDP-4-dehydrorhamnose reductase [Eubacterium sp. AS15]
gi|304551207|gb|EFM39172.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400368828|gb|EJP21835.1| dTDP-4-dehydrorhamnose reductase [Eubacterium sp. AS15]
Length = 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G LG+ L Q L+ H +DVD
Sbjct: 2 KYLITGANGQLGREL------------------------QKQLNKSDHDLFLYDVDTMDI 37
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ ++ V + +PDV+ NCAA + CEND ++A IN + L+ +E +
Sbjct: 38 TDYNQVEKIVSNIRPDVIFNCAAHTNVDGCENDIENAYKINAIGAQN--LAMISEEIGSK 95
Query: 123 LIHLSTDQVYEGVKSFYK-EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H STD V+ G + E D + P VYGKSK+ E+ + + CS + I+R++ +YG
Sbjct: 96 FVHFSTDYVFSGEDEIPRIESDFVNPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V L + + +K+ D+ P Y +D+ K+ + L+N
Sbjct: 156 N-NFVRTMLKLS------KQNDKLTVVGDQFGSPTYTKDLAKVAIDLSN 197
>gi|395651875|ref|ZP_10439725.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 289
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 18/254 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +P++++N AA + E++PD+A +IN + + E + L LIH ST
Sbjct: 46 IRSHRPNLIINAAAHTAVDQAESEPDAAFAINAIAPGI-----LAEEAKALGIPLIHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K + Y E D P+ VYG+SK+A E+ I + ILR+S +Y S
Sbjct: 101 DYVFDGSKPAPYTETDAPNPLGVYGQSKLAGEQAIAAVGGEYLILRTSWVY-----SDHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
K+ + + +L + + D+ P + + AL RW + + ++
Sbjct: 156 KNFLLT-MQRLLQEKPHLRIVADQIGAPTWAGTIALSTRALIERWQAGQAGDWGIYHLTA 214
Query: 248 PDRVSRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
S A+V+ E +G + + ++ + +++ + P + +D ++L Q ++
Sbjct: 215 QGHTSWFGFAQVIGEHLRAQGKACAELEAIPSNAYPTPAKRPLNSRLDCSRLQQQWHVSQ 274
Query: 305 VTYKDGVKLTLAAE 318
++D ++ LA +
Sbjct: 275 PQWQDALRKCLAGQ 288
>gi|332715610|ref|YP_004443076.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3]
gi|325062295|gb|ADY65985.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3]
Length = 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 17/256 (6%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PDVVV+ AA + E +PD A ++N + ++ + +IH+STD
Sbjct: 45 ALRDAKPDVVVSAAAYTAVDKAETEPDIAFAVNRDGAKA--VARAANDIGVPVIHISTDY 102
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D P +VYG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKTTAYVENDPTGPASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL--LLNVGG 247
L + +++ D+ CP D+ I+++ R L+ D L + ++ G
Sbjct: 163 LRLS------ESRDEINVVADQFGCPTSANDIAIAIVSIAKR-LATDPSAHLRGVFHMSG 215
Query: 248 PDRVSRVQMAEVV----AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ A+ + AE G S ++ ++ + Q PA+ +D KL + I
Sbjct: 216 TGETNWAGFAKQIFAFSAENGGKSI-VVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIR 274
Query: 304 PVTYKDGVKLTLAAEA 319
++ + +AA A
Sbjct: 275 LPEWQTSTRAVMAALA 290
>gi|303252479|ref|ZP_07338643.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248514|ref|ZP_07530532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648680|gb|EFL78872.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854990|gb|EFM87175.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 291
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PDV++N AA + E++ + + +INV +L+ + +++H+STD V+EG
Sbjct: 51 HPDVIINAAAHTAVDRAESEIELSEAINVKGP--QYLAEAANEIDAIILHISTDYVFEGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S YKE DE P VYGK+K+A E + + ILR++ ++G + V L
Sbjct: 109 GSGEYKENDEPNPQGVYGKTKLAGEIAVQQANKRHIILRTAWVFGEHGNNFVKTML---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ + E + D+ P Y D+ ++ + N L+ + + + G VS
Sbjct: 165 --RLAKERESLGIVSDQFGGPTYAGDIASSLIHIANIILNSKIDVFGVYHFTGKPYVSWA 222
Query: 255 QMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A E V++ L+ ++ S+ + PA+ +D+TK+ + I P ++
Sbjct: 223 DFAKKIFDEAVSQKVLEKAPLVNFIATSNYPTSAKRPANSRLDLTKIDEVFGIKPSNWQQ 282
Query: 310 GVK 312
+K
Sbjct: 283 ALK 285
>gi|414077754|ref|YP_006997072.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
gi|413971170|gb|AFW95259.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
Length = 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 16/246 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP++++N AA + E++P++A IN + + ++ ++ + LIHLSTD V+ G
Sbjct: 52 QPEIIINAAAYTAVDKAESEPENAHLINTVAPQI--IAEESQKLGSFLIHLSTDYVFNGN 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+E D P++VYG++K+A E I + C + ILR++ +YG S +
Sbjct: 110 SHYPYRETDSTNPLSVYGQTKLAGEIAIQQNCPHHIILRTAWVYGTYGKS--------NF 161
Query: 195 IDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G+ +V D+ P + +D+ I + + SE+ + N G
Sbjct: 162 VKTMLRVGQERSEVRVVADQIGSPTWAQDIASTITQIIPQLTSENAGIYHYTNSGVASWY 221
Query: 252 SRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
AE G+ + I P++ + PA + K+ Q L P ++
Sbjct: 222 DFAIAIFEEAEKLGFLLKIANIIPITTPEYPTPAKRPAYSVLACEKISQILGTYPPHWRQ 281
Query: 310 GVKLTL 315
++L L
Sbjct: 282 ELRLML 287
>gi|212558782|gb|ACJ31236.1| NAD dependent epimerase/dehydratase family protein [Shewanella
piezotolerans WP3]
Length = 303
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 26/313 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V+V G TG LG+ ++ +E+E +P +V A +S + + +DL
Sbjct: 3 KVMVTGATGLLGRAVV---AELEAQPDVEVLACGYSRAVQGV-----------HRLDLTL 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S A ++ QPDV+V+CAA P + E +P +A+++N ++ + L++ L
Sbjct: 49 SSQVTAF-IETHQPDVIVHCAAERRPDISEQNPAAALALNADATRLLTLAA--SQCGAWL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G Y E PVN YG SK E + E FA+LR I+YG +
Sbjct: 106 LYVSTDYVFDGTAPPYNEHSATNPVNFYGDSKRQGEMIVTEAKQGFAVLRLPILYG--AV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + ++ +L + E +F D R P D+ I + + + +
Sbjct: 164 ETLQESAVMVLLNQLLDENE--QFVDDWAVRSPTSTEDIASAIAKMIS-LKTTGAHLAGH 220
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ D +S+ QM + + G +T +KPV++ + + P D S+ +L
Sbjct: 221 YHFSASDTMSKYQMLLTMGGLLGLNTEHLKPVTSPT--DSAKRPHDCSLSCERLASLSIQ 278
Query: 303 DPVTYKDGVKLTL 315
V + G+K L
Sbjct: 279 SNVVFNSGIKKAL 291
>gi|392561860|gb|EIW55041.1| NAD-P-binding protein [Trametes versicolor FP-101664 SS1]
Length = 301
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+++ G +G LG + + + V HS P QL +DL
Sbjct: 3 RIIITGASGVLGSAVYAAFTSAG---HTVLGLAHSRPTGQLE-----------QLDLTDY 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V KF PD V++CAA P V E DP++A +NV S+ L+ ++ ++ L+
Sbjct: 49 DKTEQVFSKFA-PDWVIHCAAERRPDVAEKDPEAARKLNV--SVPESLAQLSKKLKHKLV 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
++STD V++G Y P+N+YG++K E + S +LR ++YGP
Sbjct: 106 YISTDYVFDGTSPPYTPSSPTNPLNLYGQTKRDGEIAVLGVSDSQSIVLRVPVLYGP--- 162
Query: 184 SPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P I + V+S G++ + H R P V D+ ++ L+ L + +
Sbjct: 163 APNNSDSAINILLDVVSDQSGKQYKMDHYATRYPTNVVDIADFLVRLSG--LPASRVIPP 220
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLI 271
+L+ G + ++ ++ + A I G S + I
Sbjct: 221 ILHYSGGEPFTKYEICLIFARILGVSHAHI 250
>gi|398339499|ref|ZP_10524202.1| dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 222
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 31/238 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K V A + L + LD + ++D
Sbjct: 1 MDLNTILITGASGLLGHHLSKFFLENGNK---VIALRKAHSLGIVGLDEI-------EID 50
Query: 61 LKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L FD V L +P+ +++CA L+ CE + A I++ S V ++
Sbjct: 51 LLD---FDTVKNLLTKIRPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQ 105
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ ++H+STD +++G E+ + PVN+YGK+K +E+ + S ILR++ +
Sbjct: 106 INSKMVHISTDHLWDGTMQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FF 164
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
GP Q++S WI + L++ EK+ F+D P+ + + ++IL +
Sbjct: 165 GPGLQWRQSLS--------DWIINSLNRNEKINAFYDVFFTPISIYHLARVILLFIQK 214
>gi|255955515|ref|XP_002568510.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590221|emb|CAP96395.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 314
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 137/312 (43%), Gaps = 35/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G +G+LG+ + + + V S P P +L A DL+
Sbjct: 5 VLVTGASGFLGRAVF---NTFQHSGVLVVGQGFSRPAPPTILKA----------DLEKEE 51
Query: 66 G----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
FD + +P +V++CAA P +CE DPD A +NV ++ L+ + +
Sbjct: 52 DIRMLFDEI-----KPQIVIHCAANKSPDLCEKDPDQARRVNVEATRT--LAKECQARGA 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LI++STD V+ G ++ Y+ + E P N+YG+ K E + E + +LR +
Sbjct: 105 FLIYISTDYVFPGTEGEAPYESDSETKPPNLYGQLKRDGEVAVLEATKDSGMGIVLRVPV 164
Query: 177 IYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + S + + + + V+ R P DV ++ + ++L E
Sbjct: 165 LYGSAKENSESAVNTLVDAVKKATDENAGVKMDDWAMRYPTNTEDVARVCRDIVIKYLRE 224
Query: 236 D---KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST-SLIKPVSASSVDRGVQSPADISM 291
K +L DR+++ ++ + +A++ G + +I + + GV P D +
Sbjct: 225 KEKRKDFPRILQFSSEDRMTKYEICQKLAQVLGVAIPGMIANKQGNDPNAGVVRPYDTHL 284
Query: 292 DITKLVQTLNID 303
TK + L ID
Sbjct: 285 S-TKALTELGID 295
>gi|387891531|ref|YP_006321828.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens A506]
gi|387164312|gb|AFJ59511.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens A506]
Length = 293
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + + E++PD+A +IN + + E + L LIH STD V+
Sbjct: 54 RPGLIINAAAHTAVDLAESEPDAAFAINAIAPRI-----LAEEAKALGIPLIHYSTDYVF 108
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E D P+ VYG+SK+A E+ I + ILR+S +Y S K+
Sbjct: 109 DGTKPAPYTESDTPNPLGVYGQSKLAGEQAIAAVGGQYLILRTSWVY-----SGHGKNFL 163
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + L +W + + ++
Sbjct: 164 LT-MQRLLQEKAQMRIVADQIGAPTWAGTIANSTRVLIEQWQAGKAGDWGVYHLTAQGET 222
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A + E G + + ++P+ +S+ + P + +D T+L Q ++ ++
Sbjct: 223 SWFGFAAAIGEQLRAEGKACAELEPIPSSAYPTPAKRPLNSRLDCTRLQQQWHVSQPQWQ 282
Query: 309 DGVKLTLAAE 318
D + LA +
Sbjct: 283 DALHECLAQQ 292
>gi|190150742|ref|YP_001969267.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307250738|ref|ZP_07532672.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307264144|ref|ZP_07545738.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915873|gb|ACE62125.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306857242|gb|EFM89364.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306870518|gb|EFN02268.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 291
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 14/243 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA + E++ + + +INV +L+ + +++H+STD V+EG
Sbjct: 51 RPDVIINAAAHTAVDRAESEVELSEAINVKGP--QYLAEAANEVDAIILHISTDYVFEGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S YKE DE P VYGK+K+A E + + ILR++ ++G + V L +
Sbjct: 109 GSGEYKENDEPNPQGVYGKTKLAGEIAVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGK 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
VL D+ P Y D+ K ++ + N + + + + G VS
Sbjct: 169 ERDVLG------IVSDQFGGPTYAGDIAKALIQIANAIMGGRTDVFGIYHFTGKPYVSWA 222
Query: 255 QMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A E V + L+ +S S + PA+ +D+TK+ I P ++
Sbjct: 223 DFANAIFDEAVLQKVIEKAPLVNFISTSDYPTPAKRPANSRLDLTKIDIVFGIKPSNWQQ 282
Query: 310 GVK 312
+K
Sbjct: 283 ALK 285
>gi|379718540|ref|YP_005310671.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus 3016]
gi|378567212|gb|AFC27522.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus 3016]
Length = 283
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 16/218 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+++CAA + E+D D A +N + +++ E + L ++STD V++G
Sbjct: 50 RPDVIIHCAAYTAVDQAESDVDGAYLVNAVGT--RNMAAAAEKVGSKLCYISTDYVFDGK 107
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D+ P +YGKSK A E+ CS + I+R+S +YG + V L +
Sbjct: 108 GTSPYREYDKTNPSGIYGKSKEAGEQLAMSLCSRYFIVRTSWVYGLHGNNFVKTMLKLS- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++++ HD+ P + D+ +LAL N +E + N G S
Sbjct: 167 -----EDRDRLKVVHDQIGSPTFTEDLAGFLLALVN---TEKYGIYHASNSG---ICSWY 215
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ A+ + E G +T +++P + R P+ MD
Sbjct: 216 EFAKAIFEESGKAT-IVEPCTTDEFPRPAPRPSYSVMD 252
>gi|307595552|ref|YP_003901869.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM
14429]
gi|307550753|gb|ADN50818.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM
14429]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV++ AA+ CE + +NV +S +++ + + +LSTD V++G
Sbjct: 59 KPDVVIHMAAIGNVDQCEEQLELCYRVNVVASRDLLTAAYRSG--SAIYYLSTDYVFDGE 116
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y E+D PVN YG +K+ AE+ + +I+R + IYG P + +
Sbjct: 117 RGMYSEDDAPRPVNYYGLTKLMAEEI--TRALGGSIIRVAWIYGT---GPGRANFGKTVV 171
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+ ++ +GE V D+ P + + + L D + +++V GP R+SR +
Sbjct: 172 EKLM-RGEVVTAITDQWSSPTLNTIIGEAFVKLL------DMRFSGIIHVVGP-RLSRYE 223
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A+ +A G++ LIKP+ S V+ + P D S+ + ++ L I
Sbjct: 224 FAKAIARHFGFNEELIKPIKLSDVNYKARRPRDSSLSNKRAIELLGI 270
>gi|167758135|ref|ZP_02430262.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704]
gi|167664032|gb|EDS08162.1| dTDP-4-dehydrorhamnose reductase [Clostridium scindens ATCC 35704]
Length = 282
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG+ PDV++NCAA++ VCE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGEINRPDVIINCAAVTDTDVCEREPELAFRVNALGA--RNLSIVARKVGAKMVQLST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ K+ Y E D+ P VYG+SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGLSKTPYSEFDDTNPKTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGRGN-NFVT 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQLLLNV 245
K L +G + D+ P +D+ +IIL L TN + + + +
Sbjct: 162 KVL------DAADEGRTLAVASDQFGSPTSAKDLARIILYLIPTNEYGTYHATCKGV--- 212
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
SR + A+ + G SL K V S D + PA +D
Sbjct: 213 -----CSRYEFAQEILRFSGREGSL-KAVPTSESDLSSERPAYAVLD 253
>gi|241204006|ref|YP_002975102.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857896|gb|ACS55563.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAVAEAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ +R +++ ++
Sbjct: 155 --FGANFVKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVADPAPSLRGTF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ E+ G ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFTELSKSGGRNVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + +
Sbjct: 273 GIRLPEWKQSMTFVM 287
>gi|383640071|ref|ZP_09952477.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas elodea ATCC 31461]
gi|32170825|gb|AAP57701.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas elodea ATCC
31461]
Length = 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 18/289 (6%)
Query: 36 THHSTPLPQLLLD-ALPHSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
T H + Q L + A H +F + DL +A K QP+++V+ AA +
Sbjct: 6 TGHDGQVAQSLGEQAQGHELIFTSYPEFDLSRPETIEAAVAKI-QPELIVSAAAYTAVDK 64
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
E++P+ AM+IN V L+ +I LSTD V++G + ++E+D P+ V
Sbjct: 65 SESEPELAMAINGDGPGV--LARAGAKIGAPIIQLSTDYVFDGSLDRPWREDDPTGPLGV 122
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YG +K+A E+ + + A++R + +Y P + V L + L+ D
Sbjct: 123 YGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALN------VVED 176
Query: 211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYS 267
+ CP D+ ILA+ RW D + + G + A + + RG
Sbjct: 177 QQGCPSSALDIASAILAVVERW-QRDGAFSGVYHFAGSGETNWADFARAIFAESAKRGGP 235
Query: 268 TSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLA 316
T+ + + +S + PA+ +D ++ T ++D + + +
Sbjct: 236 TATVTGIPSSDYPTPAKRPANSRLDCSRFADTFGYRAPAWQDSLAVVMG 284
>gi|427729722|ref|YP_007075959.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
gi|427365641|gb|AFY48362.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L++G G +GQ + Q LS HH +++ A P VDL
Sbjct: 3 KSILLLGSNGQVGQEIQQLLSP-----------HH-----KIIPVARP------TVDLTQ 40
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ QP +++N AA + E +P+ A +IN + + ++ ++ + L
Sbjct: 41 PENLRPI-IRDTQPQIIINAAAYTAVDKAETEPELATTINATAPQI--IAEESQKLGSFL 97
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD V++G +S Y+E D P+NVYGK+K+A E I + + ILR++ +YG
Sbjct: 98 IHLSTDYVFDGQQSHPYQETDTTNPLNVYGKTKLAGEIAIGQTHPDHIILRTAWVYGSFG 157
Query: 183 ISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKII 225
S ++ ++L G +++ D+ P + +D+ +I
Sbjct: 158 KS--------NFVKTMLRLGKERQEIRVVADQIGSPTWAQDIADVI 195
>gi|418408817|ref|ZP_12982131.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens 5A]
gi|358004833|gb|EHJ97160.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens 5A]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 17/256 (6%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PDVVV+ AA + E++PD A ++N + ++ +IH+STD
Sbjct: 45 ALRDAKPDVVVSAAAYTAVDKAESEPDIAFAVNRDGAKA--VARAANEIGVPVIHISTDY 102
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D P +VYG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKTTAYVENDPTGPASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL--LLNVGG 247
L + +++ D+ CP D+ I+++ R L+ D L + ++ G
Sbjct: 163 LRLS------ESRDEINVVADQFGCPTSANDIAIAIVSIAKR-LATDPSAHLRGVFHMSG 215
Query: 248 PDRVSRVQMAEVV----AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ A+ + AE G S ++ ++ + Q PA+ +D KL + I
Sbjct: 216 TGETNWAGFAKQIFAFSAENGGKSI-VVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIR 274
Query: 304 PVTYKDGVKLTLAAEA 319
++ + +AA A
Sbjct: 275 LPEWQTSTRAVMAALA 290
>gi|386390083|ref|ZP_10074879.1| dTDP-4-dehydrorhamnose reductase [Haemophilus paraphrohaemolyticus
HK411]
gi|385693767|gb|EIG24399.1| dTDP-4-dehydrorhamnose reductase [Haemophilus paraphrohaemolyticus
HK411]
Length = 292
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA + E + + + +INV +L+ +N ++H+STD V++G
Sbjct: 51 RPDVIINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKNVGAAILHISTDYVFDGQ 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ YKE D P VYGK+K+A E+ + F +LR++ ++G + V L +
Sbjct: 109 REGKYKETDATEPQGVYGKTKLAGEQAVANSNDKFIVLRTAWVFGEHGNNFVKTMLRLAK 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS-EDKQMQLLLNVGGPDRVSR 253
L D+ P Y D+ ++ + + ++ ED Q + G P +S
Sbjct: 169 TRDTLG------VVADQIGGPTYSGDIAASLIQIAEKIIAGEDVQYGIYHFTGEP-YISW 221
Query: 254 VQMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
A E V++ + L+ ++ + + PA+ +D+TK+ Q I P +K
Sbjct: 222 CDFAKAIFDEAVSQNVLEKSPLVNAITTADYPTPAKRPANSCLDLTKIQQVFGIQPSDWK 281
Query: 309 DGVK 312
+K
Sbjct: 282 KALK 285
>gi|260832866|ref|XP_002611378.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae]
gi|229296749|gb|EEN67388.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae]
Length = 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G +G LG+ L+Q G ++V +S L VDL+
Sbjct: 3 RVLITGASGLLGRALMQEFQGAAG--WEVLGLAYSRAGGSLK-----------KVDLRDQ 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +F +P+++++ AA P V E D ++ ++NV E +
Sbjct: 50 AAVRETVQEF-KPNILIHSAAQRRPDVVEKDEEATSALNV------------EATRTVAQ 96
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
TD V++G +K D P+N YG SK+A EK E + A+LR I+YGP +
Sbjct: 97 AARTDYVFDGKSPPHKVTDPPNPLNKYGISKLAGEKVALEVAKDGAVLRVPILYGP--VE 154
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S +V + + + E R P +V D+ + L + L +D + + +
Sbjct: 155 AIDESAVTVLFGAVQNTEKTAKMSDYERRYPTHVDDIAAVCRQLAEKRL-QDPSLHGVFH 213
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
G + +++ M+ +AE+ +S + P S G P + +D+++L
Sbjct: 214 WSGDEEMTKYTMSIAMAEVFSLPSSHLVPDKEPS--GGAPRPYNAQLDVSRLT 264
>gi|295659929|ref|XP_002790522.1| NAD dependent epimerase/dehydratase family protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226281699|gb|EEH37265.1| NAD dependent epimerase/dehydratase family protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 323
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VL+ G TG LG+ +L E + + S P A DL
Sbjct: 3 RTVLITGATGLLGRQVLNAF-ERDNLNWKTIGQGFSRAGPGTA--ATDTDAEIIKADLLD 59
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S V L +P VVV+CAA P C+ D D+A INV ++ L T + LL
Sbjct: 60 ESEI-VVLLDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAAT--KSLVRETSARSILL 116
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ +LR ++Y
Sbjct: 117 IYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQSGLGVVLRVPVLY 176
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
GP + S V + W ++ G K++ + R P + DV ++ + ++L +
Sbjct: 177 GPTKQNSESAVNVLVDAVWKAQDVNAGIKMDDW--AIRYPTHTADVGRVCHDIAVKYLGD 234
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
++ ++ L L DR+++ ++ + +AEI G + PV VQ P D +
Sbjct: 235 EEDIKALPRILQFSSEDRMTKYEICQKLAEILGLPLPGMIPVKEGPKPGEVQRPYDTHLS 294
Query: 293 ITKLVQTLNI 302
T+ +Q + I
Sbjct: 295 -TRELQRIGI 303
>gi|398881915|ref|ZP_10636888.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM60]
gi|398199934|gb|EJM86865.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM60]
Length = 289
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 18/251 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+PD+++N AA + E++P A ++N + + E L LIH STD V+
Sbjct: 50 RPDLIINAAAFTAVDKAESEPGPAFAVNAQAPGI-----LAEEALALGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K Y E+D P+ VYG+SK+A E+ I ILR+S +Y S + +
Sbjct: 105 DGSKGEPYNEDDAPHPLGVYGQSKLAGEQAITAVGGKHLILRTSWVY-----SALGHNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + LAL RW + ++ ++
Sbjct: 160 LT-MQRLLQEKPELRIVADQIGAPTWAGTIANSTLALIERWQAGEQGAWGTYHLTAQGET 218
Query: 252 SRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E +G + + P+ +S P + +D ++L++ + ++
Sbjct: 219 SWFGFAQAIGEALRKQGKPCAHLLPIPSSDYPTPAARPLNSRLDCSRLLREWGVSQPDWQ 278
Query: 309 DGVKLTLAAEA 319
++ LA +A
Sbjct: 279 TALRECLAGQA 289
>gi|424880972|ref|ZP_18304604.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517335|gb|EIW42067.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 295
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A PDV+V+ AA + E++ + A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALHPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAEAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAASPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ ++
Sbjct: 155 --FGTNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ E+ G ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAGEIFTELSKSGGRNVGVERIPTTDYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K +K+ +
Sbjct: 273 GIRLPEWKQSMKIVM 287
>gi|336269791|ref|XP_003349656.1| hypothetical protein SMAC_03246 [Sordaria macrospora k-hell]
gi|380093269|emb|CCC08927.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 337
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 38/324 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQG---------LSEIEGKPYDVAATHHSTPLPQLLLDALPHSF 54
K LV G TG LG+ +++ LS G ++V T S
Sbjct: 9 KTALVTGATGLLGRQVVKAFQGLSVPTELSSNAGWTWEVKGTGFSRA----------DGV 58
Query: 55 VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
VDL+ + + L+ P V+V+CAA P + DP+ +NV ++ L+
Sbjct: 59 NVLKVDLEKAEEVERI-LEDVNPQVLVHCAANRFPDKVDADPEGTRLLNVEATRT--LAK 115
Query: 115 FTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-- 170
++ LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S
Sbjct: 116 ACASRGILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVMEEFSKAGKE 175
Query: 171 ----ILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKI 224
++R ++YG +S +D+V +G+KV+ H R P DV ++
Sbjct: 176 GLGVVMRVPVLYGKTEEGRNEESAVNVLLDAVFKAQEGKKVKMDHWALRFPTNTEDVGRV 235
Query: 225 ILALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSV 279
+ ++LS E + +L + ++ ++ +M ++ AEI G ++ +
Sbjct: 236 ARDVAVKYLSTSGAERSSLPRILQMSSEEQYTKYEMCQLFAEILGVPLDNMEANTEGNDP 295
Query: 280 DRGVQSPADISMDITKLVQTLNID 303
+ VQ P D + TK ++ L ID
Sbjct: 296 NASVQRPYDCHLS-TKALKDLGID 318
>gi|388469957|ref|ZP_10144166.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas synxantha BG33R]
gi|388006654|gb|EIK67920.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas synxantha BG33R]
Length = 289
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + + E++PD+A +IN + + E + L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDLAESEPDAAFAINAIAPGI-----LAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E D P+ VYG+SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKPAPYIESDTPNPLGVYGQSKLAGEQAIAAVGGEHLILRTSWVY-----SSHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + ++ D+ P + + AL +W + + ++
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIASSTRALIQQWQAGKAGDWGVYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E I G + + ++P+ +S+ + P + +D ++L Q ++ ++
Sbjct: 219 SWFGFAQAIGEQLRIEGKACAELEPIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPHWQ 278
Query: 309 DGVKLTLAAE 318
D + LA +
Sbjct: 279 DALHECLARQ 288
>gi|373953329|ref|ZP_09613289.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM
18603]
gi|373889929|gb|EHQ25826.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM
18603]
Length = 286
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 34/301 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R++V+G +G LGQ L E + A S L ++AL +F ++
Sbjct: 2 NRIIVLGASGQLGQSLKFVTGENATGEFFFLAEEESNILD---VNALTKAFATYN----- 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P+ +NCAA + E D D+A +N V ++ + + L
Sbjct: 54 -------------PNYCINCAAYTAVDKAEGDLDTARKVNRDG--VENIAKLCKEFDTTL 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + E D P+N YG +K+ E I E N+ ILR+S +Y
Sbjct: 99 IHVSTDFVFDGNSPYPLSEMDTPNPINAYGITKLEGEVVISEYIDNYYILRTSWLYSEFG 158
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V L + + ++ D+ P Y D+ + I+A+ N S++K +
Sbjct: 159 ANFVKTMLKLA------KEKSELNIISDQVGTPTYAIDLAQAIVAIIN---SDNKAAYGI 209
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ S A+ + +I G + S+ P+ S + P MD K+ T +
Sbjct: 210 YHYSNEGVASWYDFAKAIFDIAGIAISVF-PIRTSQYPTPAKRPVFSVMDKGKIKDTFKL 268
Query: 303 D 303
D
Sbjct: 269 D 269
>gi|359457652|ref|ZP_09246215.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris sp. CCMEE 5410]
Length = 304
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 39/245 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-LPHSFVFFDV 59
M+K R+L++G G LGQ L + L + G+ V +P+ L A LP
Sbjct: 1 MAKSRILLLGAQGQLGQELQKTLPTM-GELIAVGKEAADLAVPEQLHKAILP-------- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD++VN AA + E++ + A ++N + V L+ +
Sbjct: 52 ---------------VQPDIIVNAAAYTAVDQAESEVELAHTVNQKAPTV--LADIAKTV 94
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H+STD V++G +S Y E D P +VYG SK E+ I + ILR++ +Y
Sbjct: 95 GALLVHISTDYVFDGTQSHPYTESDSPNPQSVYGHSKWQGEEGIRHIWNQHIILRTAWVY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G Q ++ ++L G +V D+ P + +++ I L + W +
Sbjct: 155 GTQGKG--------NFVKTMLRLGRERSEVRVVDDQVGAPTWAKEIGDAIATLIHHWSTS 206
Query: 236 DKQMQ 240
D Q
Sbjct: 207 DPATQ 211
>gi|187476638|ref|YP_784661.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N]
gi|115421224|emb|CAJ47729.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N]
Length = 291
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 33/316 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-LDALPHSFVFFDV-DLK 62
++L++G G +G+ L + L+ PL +LL L P D+ DL
Sbjct: 2 KILLLGKDGQVGRTLCRALA----------------PLGELLALGRRPQPQGHVDLSDLA 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S S ++ PDV+VN AA + E +PD A IN + + L+ ++
Sbjct: 46 SLSRL----VREVNPDVIVNAAAFTAVDQAEREPDLAFRINAEAPEI--LARAMRERQGW 99
Query: 123 LIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H S++ VY+G S ++ ED AP+NVYG SK A ++ I ++ +LR+S +YG +
Sbjct: 100 LVHYSSEYVYDGSGSEFRTEDSPTAPLNVYGLSKRAGDEAICRSGAHHLLLRTSWVYGSR 159
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ P Q + + + + D+ P D++ + AL +
Sbjct: 160 G-----EGFP-QTVLRLAAASGTLRMVDDQVGAPTGA-DLLADVSALALWQACRRPAVSG 212
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
L +V VSR A V + P+++ Q P + +D T+L +
Sbjct: 213 LYHVAAAGAVSRADYARHVLN-QARLACATAPIASVDYPTPAQRPLNSRLDCTRLQRVFG 271
Query: 302 IDPVTYKDGVKLTLAA 317
+ ++DG+ LA+
Sbjct: 272 LRLPDWRDGLDRALAS 287
>gi|406885325|gb|EKD32554.1| hypothetical protein ACD_77C00058G0008 [uncultured bacterium]
Length = 312
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 23/283 (8%)
Query: 44 QLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMS 101
+ L+ H F DV + +AV + ++ +VNCAA + E+D +SA +
Sbjct: 27 EALVHKGEHYLYFTDVAELDITNREAVEKFIAEKEIGIIVNCAAYTAVDKAEDDINSATA 86
Query: 102 INVPSS--LVNWLSSFTENKEN-----LLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYG 152
+NV ++ L L+ N + LLIH+STD V++G K + Y+E+D P VYG
Sbjct: 87 VNVDAAKNLAEALAKLNNNSDAGRTSPLLIHISTDYVFDG-KGYKPYREDDACNPAGVYG 145
Query: 153 KSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC 212
++K+ EK + + N+ I+R+S +Y + V I + + E + D+
Sbjct: 146 RTKLEGEKAVEKSGCNYLIIRTSWLYSSYGANFVKT------IARLAGEKESLNVVFDQV 199
Query: 213 RCPVYVRDVVKIILALTNRWL----SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYST 268
P Y D+ K I A+ ++L S K + + + S A + + G S+
Sbjct: 200 GTPTYAGDLAKAIDAVVKKYLTVLPSVQKSICGVYHFSNEGVCSWYDFAREIVKETG-SS 258
Query: 269 SLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
++KPV++ P +D +K+ I+ +++ +
Sbjct: 259 CIVKPVTSDQFPTKALRPHYSVLDKSKIKSVFGIEIPHWREAI 301
>gi|379731173|ref|YP_005323369.1| dTDP-4-dehydrorhamnose reductase [Saprospira grandis str. Lewin]
gi|378576784|gb|AFC25785.1| dTDP-4-dehydrorhamnose reductase [Saprospira grandis str. Lewin]
Length = 295
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 117/235 (49%), Gaps = 14/235 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD +++ AA++ CE P + +NV +SL L+ + ++K + +S+D V+ G
Sbjct: 58 PDAIIHAAAIANTSFCEEHPALSYHVNVYASLT--LADYAKSKGIPFLFVSSDMVFNGHS 115
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV-PKSLPIQWI 195
+ Y EE P+ YG K+A E+ + N I R ++ G I P K +W+
Sbjct: 116 APYDEESFAYPLLQYGSQKLAVEEALLADYPNAYICRLPLLLG---IGPAYSKHFFGRWL 172
Query: 196 DSVLSK-GEKVEFFHDECRCPVYVRDVVKI---ILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + GE++ F DE R P+ + + +LAL + + ++++ + + GP+R+
Sbjct: 173 AQLADQEGEQLAAFSDEYRTPLSAYEAARYLQQLLALI--YYNTEEKLPRIWHFPGPERL 230
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
SR+++A+ +A G I ++AS D P D+SM Q LN P++
Sbjct: 231 SRLELAQKMAHCFGLDAHKI--LAASLADIQPARPEDLSMQSLYAAQYLNYSPLS 283
>gi|148252645|ref|YP_001237230.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. BTAi1]
gi|146404818|gb|ABQ33324.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. BTAi1]
Length = 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 22/246 (8%)
Query: 68 DAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DAV AL QPD+V+N AA + V + D+A + +V ++ + E IH
Sbjct: 45 DAVLQALHGFQPDIVINPAAYTA--VDRAEEDAAAAYHVNRDGARAVAEASARLEIPTIH 102
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G K + Y E+D AP+NVYG SK+A E + ILR++ +Y S
Sbjct: 103 LSTDYVFDGAKPAPYVEDDAPAPINVYGASKLAGELAVAAANRRHVILRTAWVY-----S 157
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-----WLSEDKQM 239
P ++ ++ + + S + + +D+ CP D+ + ILA+ R W +E
Sbjct: 158 PFGQNF-VRTMLRLASSRDTLRVVNDQVGCPTSALDIARAILAIARRIDRAGWTNE---F 213
Query: 240 QLLLNVGGPDRVSRVQMA---EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ ++ GPD V+ A VA G T+ I+P+ + PA+ + +L
Sbjct: 214 GGVTHIAGPDVVTWYDFACSIMRVAAAHGARTARIEPIPTRDYPTPARRPANSRLSCDRL 273
Query: 297 VQTLNI 302
+
Sbjct: 274 TAVFGV 279
>gi|428216893|ref|YP_007101358.1| dTDP-4-dehydrorhamnose reductase [Pseudanabaena sp. PCC 7367]
gi|427988675|gb|AFY68930.1| dTDP-4-dehydrorhamnose reductase [Pseudanabaena sp. PCC 7367]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 30/266 (11%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A+K QPD+++N AA + E++P+ AM IN + + +++ + +IH STD
Sbjct: 46 AIKEIQPDLIINPAAYTAVDKAESEPELAMQINGIAPGI--MAAEAKKLGATMIHYSTDY 103
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K Y E D P+ VYGK+K+A E I + + ILR+ +YG + K+
Sbjct: 104 VFDGSKDGAYVETDPTNPLGVYGKTKLAGEAAIAQSGAAHLILRTCWVYG-----RIGKN 158
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-----------------ALTNRW 232
I + + + E++ D+ P + R + + +LTN W
Sbjct: 159 FMITML-RLFRQKEELRVVADQLGTPTWSRLIAQTTAHIITQAISSSASGSPTPSLTN-W 216
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADIS 290
+ D+ L G A +V + + + I+P+S S + PA+
Sbjct: 217 FT-DRGGVYHLTAAGSTSWHGFAKAIMVGDRQAEQQIIKAIQPISTSEYPTPAKRPANSQ 275
Query: 291 MDITKLVQTLNIDPVTYKDGVKLTLA 316
+D TKL T NI+ T+++ + + LA
Sbjct: 276 LDPTKLCDTFNINLPTWEECLAMVLA 301
>gi|323701365|ref|ZP_08113039.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM
574]
gi|333923093|ref|YP_004496673.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533624|gb|EGB23489.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM
574]
gi|333748654|gb|AEF93761.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 284
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 20/240 (8%)
Query: 75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG 134
GQPD+V+NCAA + E D + AM IN V L+ E L+ +STD V+ G
Sbjct: 50 GQPDIVINCAAYTAVDQAEQDRERAMQIN--GLGVGNLALVCGELEIPLVQISTDYVFSG 107
Query: 135 VK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
K Y D+ P+N YG SK+A EK++ + F ++R+S ++G + + ++
Sbjct: 108 QKPGAYTVFDQPQPINAYGWSKLAGEKYVLQLLQRFYLVRTSWLFG------LYGNNFVE 161
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKII--LALTNRWLSEDKQMQLLLNVGGPDRV 251
I + + +++ D+ CP + +D+ + + L T R+ + +V
Sbjct: 162 TILRLAQERKELTVVDDQHGCPTWTQDLARAVADLIATGRY--------GVYHVTNQGAT 213
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
+ +A + G+ T ++KPV S+ R P + +D L +T+ +++D +
Sbjct: 214 TWFGLASAIISQSGFDT-VVKPVPTSAYPRPAARPVNSVLDSFPLKETIGYLLPSWQDAL 272
>gi|342217258|ref|ZP_08709905.1| putative dTDP-4-dehydrorhamnose reductase [Peptoniphilus sp. oral
taxon 375 str. F0436]
gi|341588148|gb|EGS31548.1| putative dTDP-4-dehydrorhamnose reductase [Peptoniphilus sp. oral
taxon 375 str. F0436]
Length = 296
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V++NCA +S + CE DPD A +N + L+ + LIH+STD V+ G
Sbjct: 67 PTVIINCAGMSSAKACEKDPDEAFRVNALGA--KNLAIAANHYGARLIHISTDDVFNGKD 124
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
E E P+ VYGK+K EKFI E + I+RSS +Y +TI+ + KSL
Sbjct: 125 DTPVNEMVEPKPITVYGKTKHLGEKFIQEFTQKYFIVRSSWVYDLRTIAKIEKSL 179
>gi|336315308|ref|ZP_08570219.1| dTDP-4-dehydrorhamnose reductase [Rheinheimera sp. A13L]
gi|335880285|gb|EGM78173.1| dTDP-4-dehydrorhamnose reductase [Rheinheimera sp. A13L]
Length = 294
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 46/319 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +VLV G G +G L+Q L+ GK ++ AT S +D
Sbjct: 1 MNHLKVLVTGSNGQVGHQLVQRLT---GK-VELLATDRSV------------------LD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + +KF QPDV++N AA + E + ++A +IN L + + NK
Sbjct: 39 ISNQQQVEDFVMKF-QPDVIINAAAYTAVDKAEIETEAANAIN---HLGSKYLAIAANKV 94
Query: 121 NL-LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
N L+H+STD V+ G + S Y E+D P VYGK+K+ E + E C + I+R++ ++
Sbjct: 95 NAALLHISTDYVFSGHENSIYNEKDPTGPNGVYGKTKLDGEAAVAEHCPHHIIMRTAWVF 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G + ++ ++L G+ ++ D+ P Y D+ ++++ + S
Sbjct: 155 GEHGNN---------FVKTMLRLGQTRPELGIVADQFGGPTYAGDIADALISICQQITST 205
Query: 236 -DKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYSTS--LIKPVSASSVDRGVQSPADI 289
+ + G VS + A + AE T+ L+K ++ + PA+
Sbjct: 206 PSTALWGTYHYSGMPYVSWFEFARAIFQAAEGSNVLTNIPLLKAINTEDYPTPAKRPANS 265
Query: 290 SMDITKLVQTLNIDPVTYK 308
+D +KL + I P ++
Sbjct: 266 RLDCSKLEKAFGIKPSDWQ 284
>gi|325970219|ref|YP_004246410.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
gi|324025457|gb|ADY12216.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G G LG L + L E + ++ + + + + +D L D+ +
Sbjct: 3 ILITGAKGQLGNELCRILGEGVSERGELPLFYERSRIVAVDVDEL---------DITTSD 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
D+ +P++V NCAA++ CE + D+A +N P +L + E L
Sbjct: 54 AVDSF-FALHKPNLVFNCAAMTNVDGCEGNEDAAYLVNAVGPKNL----AVACERHGARL 108
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V++G+ + Y E DE AP YG+SK+A E+F+ C N I R++ +YG
Sbjct: 109 MHISTDYVFDGLGTRPYVETDEPAPNTAYGRSKLAGERFVLASCRNSCICRTAWLYG 165
>gi|357053898|ref|ZP_09114990.1| dTDP-4-dehydrorhamnose reductase [Clostridium clostridioforme
2_1_49FAA]
gi|355385524|gb|EHG32576.1| dTDP-4-dehydrorhamnose reductase [Clostridium clostridioforme
2_1_49FAA]
Length = 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 46 LLDALPHSFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSIN 103
+L + P + DVD + +AV +P +VNCA L+ CE P+ A +N
Sbjct: 20 ILASRPVELLLTDVDSVDITDSEAVMEYAHINRPHYIVNCAGLTDVAACEVRPEEAYRVN 79
Query: 104 VPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFI 162
+ LS ++ L+ +STD V++G ++ Y E D ++P VYGKSK+A E F+
Sbjct: 80 ALGA--RNLSVAARMGKSRLVQMSTDDVFDGESQTPYTEFDPVSPRTVYGKSKMAGENFV 137
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
E C+ I+RSS I+G SP + I + +G+ + D+ P +
Sbjct: 138 REFCNRHIIVRSSWIFGDG--SPY-----LGRILEMAGQGKTIRAASDQMASPTGADGLA 190
Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSAS 277
++ L ED L +V G SR ++A+ + GY ++PV AS
Sbjct: 191 AKVIELMEN--GEDG----LYHVTGQGFCSRYELAKEAVRLAGYQVP-VEPVYAS 238
>gi|320104538|ref|YP_004180129.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644]
gi|319751820|gb|ADV63580.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644]
Length = 318
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
LVVGG+G +G LL+ L+ G P TH +TP P + +DL
Sbjct: 18 ALVVGGSGQIGGWLLESLAR-RGLP--AVGTHQTTPAPGTV-----------PLDLGDAQ 63
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
+A+ ++ +P ++ A + CE DP + N P L S E +
Sbjct: 64 SVEALLVEL-RPPLIFLPAGFTWVDGCERDPVRCDAANRREPIRLARLASRIV--PEVRV 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGPQT 182
IH STD V++G EE P++ YG++K+AAE+ + E I+R++ ++GP+
Sbjct: 121 IHFSTDYVFDGAHGPDDEEAIPNPLSEYGRAKLAAERELTELLGERLLIIRTTWVFGPER 180
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
K+ Q + L +G+ + D+ P Y D+ ++ L R L
Sbjct: 181 QG---KNFAYQ-VARTLREGKPLVCPSDQISNPTYSPDLADAVVELALR------SAHGL 230
Query: 243 LNVGGPDRVSRVQMAEVVAE 262
L++ GPDR+ R + A +A+
Sbjct: 231 LHLAGPDRLPRCEFARRLAQ 250
>gi|307246378|ref|ZP_07528454.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255364|ref|ZP_07537174.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259814|ref|ZP_07541532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306852711|gb|EFM84940.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861673|gb|EFM93657.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866112|gb|EFM97982.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 291
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 14/243 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P+V++N AA + E++ + + +INV +L+ + +++H+STD V+EG
Sbjct: 51 NPNVIINAAAHTAVDRAESEIELSEAINVKGP--QYLAEAANEIDAVILHISTDYVFEGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S YKE+D+ P VYGK+K+A E+ + + ILR++ ++G + V L +
Sbjct: 109 GSGEYKEDDKPNPQGVYGKTKLAGERVVQQANKKHIILRTAWVFGEHGNNFVKTMLRLG- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ E + D+ P Y D+ ++ + N L+ + + + G VS
Sbjct: 168 -----KERESLGIVSDQFGGPTYAGDIANALIQIANTILNGKQDAFGIYHFTGKPYVSWA 222
Query: 255 QMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A E V++ L+ +S S + PA+ +D+TK+ I P ++
Sbjct: 223 DFANTIFNEAVSQKVLEKAPLVNFISTSDYPTPAKRPANSRLDLTKIDAVFGIKPSDWQR 282
Query: 310 GVK 312
+K
Sbjct: 283 ALK 285
>gi|221134348|ref|ZP_03560653.1| dTDP-4-dehydrorhamnose reductase [Glaciecola sp. HTCC2999]
Length = 286
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+V+NCAA + + E +P+ A IN + L+ + LIHLSTD V++G
Sbjct: 51 RPDIVINCAAYTAVDLAEKEPERAFLIN--ETGCENLAIACVKYDVHLIHLSTDYVFDGT 108
Query: 136 KSFYKEEDEI-APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
KS E ++I P+NVYG+SK+A E+ I S + ILR S ++G + V L +
Sbjct: 109 KSLPYESNDIPNPINVYGQSKLAGEQKIIHLLSRYTILRVSWVFGQYGNNFVKTMLRLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+E +D+ P D+ I + + + +L+ G VS
Sbjct: 168 -----ENNTHLEIINDQLGGPTAANDIAMICVNIA----QNSDRFTGILHFSGTPFVSWA 218
Query: 255 QMAEVV---AEIRGYSTSLIKPVSASSVD 280
Q AE + A I G S+ V S+D
Sbjct: 219 QFAEAIFRTAHIEGAIKSVPSVVPIKSID 247
>gi|284997404|ref|YP_003419171.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5]
gi|284445299|gb|ADB86801.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5]
Length = 274
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 47/303 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +G LG L + L K Y+ L L + D +K
Sbjct: 2 RILLIGASGQLGLELSEVLKGDVIKVYNTKEVQGGYKLD------LTNYLAVKDFIVKK- 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+PDV++N A+L+ CE + A +N + V + + E LI
Sbjct: 55 -----------KPDVIINTASLTDVDKCETEKGEAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG +K+ E + + I S +
Sbjct: 102 HISTDYVFDGEKGLYKEEDLPNPINYYGLTKLLGETYALSYDDSLVIRTSGVFR------ 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L D + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------DYRKTGILN 205
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGV----QSPADISMDITKLVQTL 300
V G +RVSRV +A + E P VD + + P D S+DI+K + L
Sbjct: 206 VAG-ERVSRVDLAIKIKE------KFNLPGWVKEVDNVMGWIAKRPFDSSLDISKAKRIL 258
Query: 301 NID 303
++D
Sbjct: 259 SVD 261
>gi|356960069|ref|ZP_09063051.1| dtdp-4-dehydrorhamnose reductase [gamma proteobacterium SCGC
AAA001-B15]
Length = 294
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 44/320 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+G G LG+ + + GK SF+F D
Sbjct: 2 KILVIGENGQLGK----SIKNVIGKKKS------------------NDSFIFVGRDQFDL 39
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S ++A K + DV+VNCAA + E + ++A IN + V ++ + +
Sbjct: 40 SNNQSIANFFKSDRFDVIVNCAAFTSVDKAELEIETADKINHLA--VKQIAEIANHHKTK 97
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGP 180
LIH+STD V++G Y E D+ P+NVYGKSK+A E+ I+ N A I+R+S +Y
Sbjct: 98 LIHISTDYVFDGKSDNPYSESDKTNPINVYGKSKLAGEQAIFLAMPNNAIIIRTSWVYSE 157
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTN--RWLSE 235
++D++L G++ E + D+ P Y ++ IL + N ++ S
Sbjct: 158 ---------FGNNFVDTILKLGKEQEELNIVCDQLGNPTYANNLAIAILQIINNEQFYSF 208
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+K Q + + + A+ V E+ + +L KP++ + P + M+ K
Sbjct: 209 NKGTQ-IFHYSNKGSCNWYAFAKEVIELASINCTL-KPITTDNYKTTAMRPKNTLMNKDK 266
Query: 296 LVQTLNIDPVTYKDGVKLTL 315
+ +T + +K +K L
Sbjct: 267 ISKTFGVQIYDWKKSLKDCL 286
>gi|407774429|ref|ZP_11121727.1| dTDP-4-dehydrorhamnose reductase [Thalassospira profundimaris
WP0211]
gi|407282471|gb|EKF08029.1| dTDP-4-dehydrorhamnose reductase [Thalassospira profundimaris
WP0211]
Length = 303
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKS 63
++LV G G L L AA+ H P QL +FV + DL+
Sbjct: 3 KILVFGKNGQLASCL--------------AASAHEFPDAQL-------TFVGREECDLED 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + V + QPD+VVN AA + + E + A +N + V ++ + L
Sbjct: 42 ASQIEPVIDRL-QPDIVVNAAAYTAVDLAEQQENIAFKVNFDA--VRAMAQALAKRAIPL 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + Y+EEDE++P+ VYG SK+A E + E I+R+S +Y
Sbjct: 99 IHVSTDYVFDGKGTRPYREEDEVSPLGVYGNSKLAGEVAVREAHQKHLIVRTSWVY---- 154
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ + +++++ ++V D+ CP D+ IL L
Sbjct: 155 -SQFGKNF-VKTMLNLMAQRDEVRIVDDQTGCPTSAHDLAHAILEL 198
>gi|282601176|ref|ZP_05981009.2| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum
variabile DSM 15176]
gi|282569884|gb|EFB75419.1| NAD dependent epimerase/dehydratase family protein [Subdoligranulum
variabile DSM 15176]
Length = 281
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G+LG +LQ L+ +L L LPH + ++G
Sbjct: 3 RVLLTGAGGFLGARILQQLAG------------------RLELLTLPHGLM-----ARAG 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ PD +++ AALS CE P+ + NV WL+ L+
Sbjct: 40 QEELREAVARLHPDAILHTAALSDTGYCEAHPEESYRANVEVPF--WLAEAARAAGAKLV 97
Query: 125 HLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-PQ 181
S+DQVY G++ + E ++P NVYG+ K AE+ + + +LR++ +Y P
Sbjct: 98 AFSSDQVYAGLQEHGPFTENTPLSPANVYGRHKREAEQRVLDILPGAVLLRATWLYDLPG 157
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
P+ +LP+ + + + GE + F + R Y R V+ +L
Sbjct: 158 YGLPIRGNLPLNLLRAART-GEVLRFSRRDYRGVTYARQAVEALL 201
>gi|418298200|ref|ZP_12910039.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536795|gb|EHH06062.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 297
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PD VV+ AA + E++PD A ++N + ++ + +IHLSTD
Sbjct: 45 ALREVKPDAVVSAAAYTAVDKAESEPDIAFAVNRDGARA--VAQAASDIGIPVIHLSTDY 102
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K + Y E D P ++YG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKATAYVESDPTGPTSIYGRSKLEGEQAVSEATGNYAVLRTAWVYSEYGNNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLLNVGGP 248
L + +++ D+ CP D+ I+A+ + + + +++ + ++ G
Sbjct: 163 LRLS------ENRDEINVVADQFGCPTSANDIATAIVAIARKLVDDSSPRLRGVFHLSGT 216
Query: 249 DRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ A+ + +E G + ++ ++ + + PA+ +D +KL
Sbjct: 217 GETNWANFAKQIFAFSEENGGKSMIVNDITTAQYPTPARRPANSRLDCSKL 267
>gi|451947382|ref|YP_007467977.1| dTDP-4-dehydrorhamnose reductase [Desulfocapsa sulfexigens DSM
10523]
gi|451906730|gb|AGF78324.1| dTDP-4-dehydrorhamnose reductase [Desulfocapsa sulfexigens DSM
10523]
Length = 293
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 38/183 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF---DVDL 61
++L+ GG G LGQ DV + LLDA H + +D+
Sbjct: 2 KILICGGHGQLGQ--------------DVGS----------LLDA-DHEVMSCGSRQLDI 36
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENK 119
+ S ++ + QPD+V+NCAA + CE + A +N P +L + E
Sbjct: 37 SNTSQVASIFSNY-QPDIVINCAAYTAVDKCETETQLAWQVNATGPENL----ARQAEET 91
Query: 120 ENLLIHLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
LIH+STD V++G K+ Y E++++AP++ YG+SK+A E+ I SN+ ILR++
Sbjct: 92 GARLIHISTDYVFDGKKTATESYSEDEDVAPLSEYGRSKLAGEQAIEAYSSNYLILRTAW 151
Query: 177 IYG 179
+YG
Sbjct: 152 LYG 154
>gi|70607434|ref|YP_256304.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM
639]
gi|449067682|ref|YP_007434764.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius N8]
gi|449069956|ref|YP_007437037.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius
Ron12/I]
gi|68568082|gb|AAY81011.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM
639]
gi|449036190|gb|AGE71616.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius N8]
gi|449038464|gb|AGE73889.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius
Ron12/I]
Length = 282
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 39/288 (13%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQ-LLLDALPHSFVFFDVDLKSGS 65
L++GG+G LGQ L + + D T S P+ + LD + V D+ +K+
Sbjct: 4 LIIGGSGQLGQELGKLIK-------DSILTFSSRPIEGGIYLDTRDYIRVE-DLIMKT-- 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+P+V++N +A++ CE D +A S+N S V + ++ +
Sbjct: 54 ----------KPEVIINTSAITDVDKCEVDRINAHSVN--SLAVKHMVRAASITKSYFVQ 101
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGPQTIS 184
+STD V++G + Y E+D P+N YG +K+ E Y +++ ++R+S IYG
Sbjct: 102 ISTDYVFDGNRGNYNEDDLPNPLNYYGLTKLLGE--TYSLSYDYSLVIRTSGIYGSN--- 156
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
++ P+ + S L KG KV D P+ V+ + + I+ L + +LN
Sbjct: 157 --KENFPLYVLKS-LEKGSKVRAVWDMYYSPINVKQLAEAIVQLL------PLRKTGILN 207
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ G DR+SR +A +A++ + +LI+ S + + P D S+D
Sbjct: 208 IAG-DRISRYDLALKIAKMSSLNENLIEAASYEEMSWRAKRPKDSSLD 254
>gi|423251280|ref|ZP_17232293.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|423254604|ref|ZP_17235534.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|423305556|ref|ZP_17283555.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|392650598|gb|EIY44265.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|392653170|gb|EIY46826.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|392680788|gb|EIY74152.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
Length = 289
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 39/298 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV G G LG +++ + G D +VF D++ +
Sbjct: 3 ILVTGSNGQLGNEMVR----VSGNSKD--------------------RYVFTDIEELDIT 38
Query: 66 GFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
DA+ ++ Q DV+VNCAA + E+D +A IN + V +L++ ++ L
Sbjct: 39 NLDAILSLVRKEQIDVIVNCAAYTNVDKAEDDEKAADLINHVA--VGYLAAAAKSVNATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V+ G+ + EED P VYGK+K+A E+ + N+ ILR++ +Y
Sbjct: 97 IHISTDYVFRGINYVPFTEEDMTEPTGVYGKTKLAGEEAVVNSGCNYIILRTAWLYSAWG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V L + +L D+ P + D+ I + +R +++ K +
Sbjct: 157 KNFVKTMLKLTEEKDILP------VIFDQIGTPTFAGDLADAIGWILDRRMTDKKGIYHF 210
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
N G S A +A G +T ++P+ V+ P +D K +T
Sbjct: 211 SNEG---VCSWYDFAVTIARFAG-NTCDVRPIHTFEYPSKVRRPHYSVLDKAKFRETF 264
>gi|323135558|ref|ZP_08070641.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242]
gi|322398649|gb|EFY01168.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 25/236 (10%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVYEG 134
D +VN AA + E++PD AM +N + + E L L+HLSTD V++G
Sbjct: 57 DAIVNAAAYTAVDKAESEPDVAMRVNGEGA-----GNVAEAAAELGVPLLHLSTDYVFDG 111
Query: 135 VKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+ Y+E+D P YG+SK+A E+ I N AILR++ +Y P
Sbjct: 112 ARDRPYREDDPTGPTGAYGRSKLAGEEKIAAIHPNHAILRTAWVYSP---------FGAN 162
Query: 194 WIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGGPD 249
++ ++L G E+V D+ P D+ ++ + R ++ +++ + ++ G
Sbjct: 163 FVKTMLRLGETREEVGVVADQLGNPTNAIDIADALIVIARRLAADPSPELRGVFHMTGQG 222
Query: 250 RVSRVQMAE---VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ AE +AE G +K ++ + + PA+ +D TKL + +
Sbjct: 223 EATWADFAESTFAIAERFGRKPVRVKRITTADYPTPARRPANSRLDNTKLNERFGV 278
>gi|218197439|gb|EEC79866.1| hypothetical protein OsI_21362 [Oryza sativa Indica Group]
Length = 170
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALA--AGGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQ 76
L+SG G AV+ FGQ
Sbjct: 58 LRSGDGLRAVSESFGQ 73
>gi|171320478|ref|ZP_02909509.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
gi|171094289|gb|EDT39365.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
Length = 314
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 30/326 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAAALSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHL 229
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---PVSASSVDRGVQSPADIS 290
+ + + + G + +++ +A+ +A G +L + P A+ P D
Sbjct: 230 AGSSVIG-IRHWSGQEPMTKYDIAQRIAAALGIDAALARIDTPADATP------RPYDCH 282
Query: 291 MDITKLVQTLNIDPVT-YKDGVKLTL 315
+D + V+ L I T + G++ L
Sbjct: 283 LDAAR-VRALGIAHATPFATGLQTVL 307
>gi|186684650|ref|YP_001867846.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
gi|186467102|gb|ACC82903.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
Length = 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 88/155 (56%), Gaps = 8/155 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++ QP +++N AA + E++P+ A +IN + L+ ++ ++ LIH+STD V
Sbjct: 48 IRSKQPQIIINAAAYTAVDKAESEPELASAINATAPLI--IAQESQKLGAFLIHISTDYV 105
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G Y+E D P++VYGK+K+A E+ I E C++ ILR++ +YG KS
Sbjct: 106 FDGNGYRPYQETDATNPLSVYGKTKLAGEEAIRETCAHHLILRTAWVYG-----TFGKSN 160
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
++ + + ++ +++ D+ P + +D+ +I
Sbjct: 161 FVKTMLRLGAERQELRVVADQIGSPTWAQDIATVI 195
>gi|325967694|ref|YP_004243886.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28]
gi|323706897|gb|ADY00384.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28]
Length = 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV++ AA+ CE + +NV +S +++ + +LSTD V++G
Sbjct: 59 KPDVVIHMAAIGNVDQCEEQLELCYRVNVAASRELLTAAYRVGAA--IYYLSTDYVFDGE 116
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y E+D PVN YG +K+ AE+ + +I+R + IYG P ++
Sbjct: 117 RGMYSEDDAPRPVNYYGLTKLLAEEIT--RALGGSIVRVAWIYGTGPGRPNFGKTVVE-- 172
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
L +GE V D+ P + + L D + +++V GP R+SR +
Sbjct: 173 --KLMRGEVVTAITDQWSSPTLNTIIGEAFAKLL------DIKFNGVIHVVGP-RLSRYE 223
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A +A G+S LIKP+ V+ + P D S++ K V+ L I
Sbjct: 224 FARAIARYFGFSEELIKPIRLIDVNYRARRPRDSSLNNRKAVELLGI 270
>gi|418465977|ref|ZP_13036909.1| dTDP-4-dehydrorhamnose reductase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755475|gb|EHK89639.1| dTDP-4-dehydrorhamnose reductase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 292
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 138/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGHCLTQ---QLQGK-HEILAVDHD------------------EIDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 SAVKKTVKNF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D P ++YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDATDPQSIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGKSVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKVPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
+I P ++ +K
Sbjct: 272 VFSIQPSDWQRALK 285
>gi|378727734|gb|EHY54193.1| dTDP-4-dehydrorhamnose reductase [Exophiala dermatitidis
NIH/UT8656]
Length = 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 55/331 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
LV G +G+LG+ + + ++ + T S + VD++
Sbjct: 4 ALVTGASGFLGRQVYKAFTDAG---WQTTGTGFSRAAGSIR-----------KVDIQDA- 48
Query: 66 GFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
DAV F + P VVV+CAA P C +P++A +NV + +++ + L
Sbjct: 49 --DAVERLFDEVKPQVVVHCAADRQPDSCTKNPEAAYRLNV--TATQHIATAAARHGSFL 104
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFI-----------YEKCSN-- 168
I++STD V+ G ++ YK DE P N+YG++K EK + Y+ +
Sbjct: 105 IYISTDYVFPGKPGEAPYKATDEPNPTNIYGRTKWEGEKVVLNTTTDTNANNYDSSNTPP 164
Query: 169 --FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC----------RCPV 216
+LR ++YGP S S+ I + +L K ++ + + R P
Sbjct: 165 VKSVVLRVPVLYGPVAESNSESSVNI--LMDILYKAQEAKDKNPSSTPIKMDDWGIRYPT 222
Query: 217 YVRDVVKIILALTNRWLSE----DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK 272
+ DV ++ + + S +K++ +L DR+++ +M + AEI G I
Sbjct: 223 NIEDVARVCVDTAKYYTSSAAAANKELPRILQFTSEDRMTKYEMCKTFAEIMGLPCDGIV 282
Query: 273 PVSASSVDRGVQSPADISMDITKLVQTLNID 303
Q P D +D + L + L ID
Sbjct: 283 ADKDGGSGAATQRPYDTHLDTSDL-KKLGID 312
>gi|170698254|ref|ZP_02889331.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10]
gi|170136835|gb|EDT05086.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10]
Length = 314
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 30/326 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPENVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV ++I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHL 229
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---PVSASSVDRGVQSPADIS 290
+ + + + G + +++ +A +A G +L + P A+ P D
Sbjct: 230 A-GSTVTGIRHWSGEEPMTKYDIARRIAAALGIDAALARIDTPADAT------PRPYDCH 282
Query: 291 MDITKLVQTLNIDPVT-YKDGVKLTL 315
+D + V+ L I T + G++ L
Sbjct: 283 LDAAR-VRALGIAHATPFATGLQAVL 307
>gi|398877925|ref|ZP_10633060.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM67]
gi|398201329|gb|EJM88210.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM67]
Length = 293
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ PD+++N AA + E++P+ A +IN + E L LIH ST
Sbjct: 50 VRLAHPDLIINAAAHTAVDRAESEPELAFAINATGPGI-----LAEEALALGIPLIHYST 104
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D P+ VYG+SK+A E+ I ILR+S +Y + S
Sbjct: 105 DYVFDGSKGEPYNEADAPKPLGVYGQSKLAGEQAITAVGGMHLILRTSWVY---SASGSN 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L +Q +L + ++ D+ P + + LAL RW + ++ ++
Sbjct: 162 FLLTMQ---RLLQEKPELRIVADQIGAPTWAGTIANSTLALIERWQAGERGAWGTYHLTA 218
Query: 248 PDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
S A+ + E +G + + P+ +S P + +D ++L++ +
Sbjct: 219 QGETSWFGFAQAIGEALRKQGKPCAHLLPIPSSDYPTPAARPLNSRLDCSRLLREWGVSQ 278
Query: 305 VTYKDGVKLTLAAEA 319
++ ++ LA +A
Sbjct: 279 PDWQTALRECLAGQA 293
>gi|284174227|ref|ZP_06388196.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
gi|384434882|ref|YP_005644240.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
gi|261603036|gb|ACX92639.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
Length = 272
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 50/308 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLK 62
R+L++G +G LG L LS K ++V T++S+ + LD PH D +K
Sbjct: 2 RILLIGASGQLGVELSNVLS----KKHEVIKTYNSSEIQGYKLDITDFPH---LEDFIIK 54
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+PDV++N AA++ CE + D A IN S V + ++
Sbjct: 55 K------------RPDVIINTAAMTDVDKCEIEKDKAYKIN--SQAVKHIVRAGRVVDSY 100
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+IH+STD V++G K YKE++ P+N YG SK+ E F + I+R+S ++
Sbjct: 101 VIHISTDYVFDGNKGNYKEDNIPNPINYYGLSKLLGEIFASSYDESL-IIRTSGVFR--- 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
K PI ++ L +G+ V F P+ R K+ LA+ D + +
Sbjct: 157 ----NKGFPI-YVYKTLKEGKTVLAFKG-YYSPISAR---KLALAIDELL---DLRKTGI 204
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR----GVQSPADISMDITKLVQ 298
++V G +R+SR ++A + E P VD + P D S+DI+K +
Sbjct: 205 IHVAG-ERISRYELAIKIKE------KFNLPGEVKEVDEIKSWIAKRPYDSSLDISKARK 257
Query: 299 TLNIDPVT 306
L ID T
Sbjct: 258 LLTIDFYT 265
>gi|119947065|ref|YP_944745.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
gi|119865669|gb|ABM05146.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
Length = 294
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 30/257 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G +G L + L + T L LD+ +D+
Sbjct: 2 RVLITGSKGQVGHCLTEQL-------------RNYTDAQFLALDSKG-------LDITDQ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S AV +F +P +++N AA + E++ D A +IN + +L+ ++ +++
Sbjct: 42 SAVQAVVNEF-KPTIIINAAAYTAVDRAEDESDLAYAINRDGA--KYLAEAAQSVNAVIL 98
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K Y E D +P +YG+SK+A EK + E CS ILR++ ++G
Sbjct: 99 HISTDYVFSGDKEGMYTEADLTSPQGIYGESKLAGEKAVIEACSRHIILRTAWVFGEHGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + D +
Sbjct: 159 NFVKIMLRLAKTHDTLG------IVGDQFGGPTYAGDIASALVTVAKTLSNGDNDKYGIY 212
Query: 244 NVGGPDRVSRVQMAEVV 260
+ G VS Q A+ +
Sbjct: 213 HYSGFPHVSWSQFAQAI 229
>gi|388856639|emb|CCF49756.1| related to Vacuolar protein sorting-associated protein VPS5
[Ustilago hordei]
Length = 1318
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 28/233 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q ++ K YD A + P+ L +DL
Sbjct: 2 KVLITGASGLLGRAVHQQCNQ---KGYDTKALAFTRSDPEKQL---------VKLDLTDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ +F QPDV+V+ AA E DP ++ +INV P+S+ S + L
Sbjct: 50 TALESCLREF-QPDVIVHTAAERRSDFVEKDPAASHAINVDAPASIAMLASKL--DHVPL 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYGP 180
LI++STD V++G K YK +D P+N YG K+ E+ + E K +F LR I+YG
Sbjct: 107 LINISTDYVFDGFKPPYKVDDAPNPLNAYGVGKLQGERAVAENAKPGHFTNLRVPILYG- 165
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+TI+ ++ + +D++ + +K + + R P V DV K IL L
Sbjct: 166 KTITNNESAVNV-LLDAIQPPAGSTTPKKCDAY--AVRYPTNVGDVAKAILKL 215
>gi|440466584|gb|ELQ35844.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
Y34]
gi|440486840|gb|ELQ66668.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
P131]
Length = 335
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 46/333 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++KR LV G TG LG+ + + G + V T S L A D
Sbjct: 6 MTEKRALVTGATGLLGREVAKAFQLKHG--WTVTGTAFSRADGVSTLRA----------D 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + V L +P VVV+CAA P + DP+ +NV ++ L+ +++
Sbjct: 54 LANEAEVEKV-LDQVKPHVVVHCAANRFPDKVDQDPEGTRRLNVAATAS--LARLCADRD 110
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS---NFAILRSS 175
LI++STD V+ G ++ Y P N+YG++K+ EK + E+ + ++R
Sbjct: 111 VALIYISTDYVFSGRPGEAPYAAGAATGPTNLYGQTKLDGEKAVLEEMAAKGRGVVMRVP 170
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG +P ++ + +D+V E K++ H R P DV ++ A + W
Sbjct: 171 VLYG-HAETPGESAVNVL-MDAVWKSQEAETKIKMDHWAIRYPTNTEDVGRVC-AGSKGW 227
Query: 233 LS------------------EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP- 273
L+ + K + +L D++++ ++ +V EI G S I+
Sbjct: 228 LTMVFAFLLQDVAEKYVDAQDAKSLPKVLQFSSEDKLTKYEICQVFGEIMGLSIEGIEAN 287
Query: 274 VSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
+ + VQ P D + TK ++ L ID T
Sbjct: 288 TQGNDPNASVQRPYDCHLS-TKELKDLGIDVST 319
>gi|313115158|ref|ZP_07800643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622524|gb|EFQ05994.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 305
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG +L+ L E P+P+ LL+A + D+D+ +
Sbjct: 2 KIIVTGCKGQLGTEILKQLRE---------GRSEIGPVPEKLLNATVIAVDLPDLDISNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PDV++NCAA + CE + D+A N P +L + E
Sbjct: 53 KMVDEF-IRRNRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNL----AQAAEKTGAR 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ + C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGVAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ IL L
Sbjct: 167 ----SYYGKNF-VKTIVNAGKKFGKLEVVNDQCGNPTNAVDLAHEILQL 210
>gi|291534624|emb|CBL07736.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis M50/1]
Length = 290
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 2 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 35
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 36 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 92
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 93 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 151
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 152 IFRTAWLYG 160
>gi|240144746|ref|ZP_04743347.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82]
gi|257203267|gb|EEV01552.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82]
Length = 291
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 3 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 36
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 37 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 93
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 94 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 152
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 153 IFRTAWLYG 161
>gi|190891197|ref|YP_001977739.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 652]
gi|190696476|gb|ACE90561.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CIAT 652]
Length = 295
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSAQRPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAIAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ ++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTF 212
Query: 244 NVGGPDRVSRVQMAEVV 260
++ G S AE +
Sbjct: 213 HLTGSGEASWADFAEAI 229
>gi|312115796|ref|YP_004013392.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC
17100]
gi|311220925|gb|ADP72293.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC
17100]
Length = 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L+ GG+G LG L + P P L P ++D
Sbjct: 1 MSLAEILITGGSGQLGLELAR------------------LPWPDGLRLRTPDRS---ELD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTEN 118
L S A + +P ++N + E+DP +A +N P+++
Sbjct: 40 LSSTESITAY-IDACRPLAIINAGGYTQVDGAESDPLTAFCLNAMGPAAIAE----AARR 94
Query: 119 KENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ LIH+STD V++G + FY E D ++P+ VYG SK A E+ + I+R++ +
Sbjct: 95 HGSRLIHISTDYVFDGSRHGFYDESDAVSPLGVYGASKEAGEQAVRAILPGSVIVRTAWL 154
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ P + ++ ++L G + V D+ CP D+ + + + R L
Sbjct: 155 FSPYRTN---------FVKTMLRIGRERPSVRIVADQFGCPTAASDLARALQTIAMR-LV 204
Query: 235 EDKQMQL----LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
ED +N G + A A GY+ + P+S + + PA+
Sbjct: 205 EDPAAPTGTFHFVNGGEATWYALACEAFAQATRYGYTAPAVAPISTAEYPTPARRPANSR 264
Query: 291 MDITKLVQTLNIDPVTYKDGVKLTL 315
+ + +L ++ I P +K V T+
Sbjct: 265 LSVARLTESYAITPRPWKLAVAETV 289
>gi|407712400|ref|YP_006832965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
gi|407234584|gb|AFT84783.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
Length = 297
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P ++VN AA + E D D+AM +N + V L+ L+H STD V++G K
Sbjct: 57 PGLIVNPAAHTAVDKAETDIDAAMRLNAEAPGV--LAEEARRVGAALVHYSTDYVFDGTK 114
Query: 137 -SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E+D + P NVYGKSK+A E+ I E + I R+S +YG + + + L +
Sbjct: 115 VGAYVEDDAVNPQNVYGKSKLAGEQAIAESGCSHLIFRTSWVYGTRGKNFLLTMLRLG-- 172
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKI---ILALT-----NRWLSEDKQMQLLLNVGG 247
++ +++ D+ P + + + +LA + W + + L G
Sbjct: 173 ----AERDELSVVADQYGAPTWSNTIAVLSANVLAQAAAPNQSDWWEKHSGVYHLTASGA 228
Query: 248 PDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
S AE + E+ T +KP+ A+S P++ M KL +
Sbjct: 229 ---TSWHGFAEAIFELSHLETKPTVKPIPAASYPTPATRPSNSRMSNEKLAAAFGVRSPD 285
Query: 307 YKDGVKLTLAAE 318
++D ++L LAA
Sbjct: 286 WRDALRLCLAAR 297
>gi|254168139|ref|ZP_04874986.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|197622905|gb|EDY35473.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
Length = 284
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V ++G G LG L++ E + PL LD
Sbjct: 2 KVAIIGANGQLGSDLVEIFGE------------RAVPLTHNDLDV--------------- 34
Query: 65 SGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +D++ LK P+V++N AA E +P A ++N +L +++ + +
Sbjct: 35 TNYDSLKILKKIDPNVIINTAAYVRVDDAEKEPKKAFNVNAIGAL--YVAKIANELDAIN 92
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y EED P+NVYG SK E F + ++R + +YG +
Sbjct: 93 VYISTDYVFDGRKGAPYTEEDMPNPINVYGASKYMGEIFTRNYSKKYYVVRVASLYGKKG 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + WI GE+++ D P Y RDV K T + L E K +
Sbjct: 153 ARGKGGNF-VNWIIEKAKGGEEIKVVDDIIMSPTYTRDVAK-----TLKKLLEIKPEYGI 206
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
++ S + A+ + +I GY SL K + + ++R + P
Sbjct: 207 YHMANEGYCSWYEFAKSILDIIGYRISL-KSIKSVELNRLAKRP 249
>gi|421469687|ref|ZP_15918128.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
ATCC BAA-247]
gi|400229215|gb|EJO59074.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
ATCC BAA-247]
Length = 319
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
++G +G LG+ ++ LS + +A + LL P DV
Sbjct: 1 MIGASGLLGRAVVASLSR-DPAFGTIATIRNRDTRGARLLALPPDKIAMLDV-------L 52
Query: 68 DAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 53 DRPALERAFDLHRPAAVVVCAAERRPDVCERDPAGARAINVDAPAR--IGALAARYGAWT 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP--- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 111 LGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIAD 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ S V +P + S + E V R P Y DV +I L +R L+ +
Sbjct: 171 WSESAVTSLVP-AIVASARAGAEAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAGASVLG 229
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ + G + +++ ++A+ +A+ G SL P+ + P D +D +L
Sbjct: 230 -IRHWSGDEAMTKYEIAQRIADALGLRASL-APIDTPA--DATPRPYDCHLDAAQL 281
>gi|430745183|ref|YP_007204312.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
gi|430016903|gb|AGA28617.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
Length = 313
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 32/281 (11%)
Query: 9 VGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL--LLDALPHSFVFFDVDLKSGSG 66
+GG+G LG LL+ L+E + +D A T +T P L L A + +
Sbjct: 17 IGGSGQLGGWLLRVLAE---RGHDAAGTFATTAFPGLTPLDAADSAAAADW--------- 64
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
++ P VV A + CE DP A + NV L L+ ++
Sbjct: 65 -----VRSQNPSVVFYPAGFTWVDGCERDPGKARAANVEQPLN--LARAAAEVGARFVYF 117
Query: 127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK-FIYEKCSNFAILRSSIIYGPQTISP 185
STD V++G Y E P++VYG++K+ AE+ + R++ +YGP+
Sbjct: 118 STDYVFDGQDGPYAESAAPRPLSVYGQAKLEAEQALADALGDLLLVARTTWVYGPERQG- 176
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
K+ Q + LS+G + D+ P Y DV + ++ L + S L++V
Sbjct: 177 --KNFAYQ-LAKALSEGRSLPCPSDQVSTPSYGPDVAQAMVRLIEQGRSG------LVHV 227
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
GPD + RV A+ +A G + + I+ + + + +G P
Sbjct: 228 AGPDLMDRVAFAQALAHSFGLNAARIEARTTAELGQGAPRP 268
>gi|91782042|ref|YP_557248.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
gi|91685996|gb|ABE29196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
Length = 305
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 24/269 (8%)
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL+S +V + QPDV+VN AA + END + A +IN ++ V L+ ++
Sbjct: 43 DLRSPDSIRSVVREV-QPDVIVNPAAYTAVDAAENDAELAYAINGVAAGV--LAEEAKSL 99
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H STD V++G K Y E D + P +VYGKSK+A E+ I E+ + +LR+ +
Sbjct: 100 GGLLVHYSTDYVFDGRKDGPYVETDVVNPQSVYGKSKLAGEQAIAERGATAIVLRTCWVA 159
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP---VYVRDVVKIILALTNRWLSE 235
G + L + + + + D+ P + DV I+A WL
Sbjct: 160 GAHGSNFAKTMLRLG------RERDSLRVIADQYGAPTTAALIADVTAQIVA--RHWLHG 211
Query: 236 DKQ--MQLLLNVGGPDRVSRVQMAEVV---AEIRGYSTSL----IKPVSASSVDRGVQSP 286
D+ + ++ + S A V A RG + I+P++ + P
Sbjct: 212 DRAAFASGVYHLAAAGQTSWHGYATEVLQFAAARGVELKVDLARIEPIATADYPLPAPRP 271
Query: 287 ADISMDITKLVQTLNIDPVTYKDGVKLTL 315
A+ +D KL QT I+ ++DGV L
Sbjct: 272 ANSRLDTHKLRQTFGINLPDWRDGVHHLL 300
>gi|384161398|ref|YP_005543471.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208]
gi|384170498|ref|YP_005551876.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens XH7]
gi|328555486|gb|AEB25978.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208]
gi|341829777|gb|AEK91028.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens XH7]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRRLKR-EG--YEVIA------LTKAMMNISDQQSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYTSLEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GARFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGNNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|399039912|ref|ZP_10735366.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF122]
gi|398061797|gb|EJL53583.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF122]
Length = 298
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 28 GKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALS 87
GK V H T LP + AL D+D+++ A+ L+ PD++VN AA +
Sbjct: 7 GKNGQVGRELHRTLLPLGAVTALERR----DIDMEATETLPAI-LEEHAPDLIVNAAAWT 61
Query: 88 VPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIA 146
E+ P++A +N + + ++ F ++ L+H STD V++G K Y E D+
Sbjct: 62 QVDRAESTPEAAFRVNAEAPQI--IARFARDRGATLVHYSTDYVFDGRKEAPYVESDDTN 119
Query: 147 PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
P+NVYG+SK A E+ I F ILR+S ++
Sbjct: 120 PLNVYGQSKRAGEQAIEASGCRFVILRTSWVF 151
>gi|409044928|gb|EKM54409.1| hypothetical protein PHACADRAFT_258235, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 28/274 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G +G LG + +V HS P L + +DL G
Sbjct: 2 RVIVTGASGVLGAAVYNAFKASPKN--EVLGLAHSRPRDGLKV-----------LDLLEG 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
+ V +F +PD V++CAA P V E +P+ A +N VP++L ++ ++ +
Sbjct: 49 EQVEKVFAEF-KPDWVIHCAAERRPDVAEKNPEGAQKLNADVPANL----AALAKSLKFT 103
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQ 181
L+++STD VY+G Y P+N+YG++K E + + +LR ++YGP
Sbjct: 104 LVYISTDYVYDGTHPPYPPSAPTNPLNLYGRTKRDGEFAVLGVTGAKTIVLRVPVLYGP- 162
Query: 182 TISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+P + + ++S G+ + H R P V D+ ++ LT+ L K +
Sbjct: 163 --APNNSDTAVNILIDIVSDQSGKTYKMDHYATRYPTNVLDIADFLVRLTS--LPPTKAI 218
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
+L+ + ++ +M V A+I G I P
Sbjct: 219 PPILHYSAEEPFTKYEMCLVFAKILGLPHGHIVP 252
>gi|154687906|ref|YP_001423067.1| SpsK [Bacillus amyloliquefaciens FZB42]
gi|154353757|gb|ABS75836.1| SpsK [Bacillus amyloliquefaciens FZB42]
Length = 282
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKQ-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|288801217|ref|ZP_06406672.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299
str. F0039]
gi|288331828|gb|EFC70311.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299
str. F0039]
Length = 284
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 49/316 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G LG ++ +HH +F++D+
Sbjct: 2 RILVTGSNGQLGSEIV---------ALQAQESHHQ----------------WFNLDINEL 36
Query: 65 SGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
D A++ D ++NCAA + E D + +N + +L+ E
Sbjct: 37 DITDKKAIEQFVMSNSIDGIINCAAYTNVDKAEEDIEVCYKVNRDAP--QYLAQAIEKVG 94
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G+ + Y E+D PV +YGKSK+A E+ + C I+R++ +Y
Sbjct: 95 GFIIHISTDYVFDGISNIPYTEQDNPNPVTIYGKSKIAGEQNVCNSCKRHVIIRTAWVYS 154
Query: 180 PQTISPVPKSLPIQWIDSVLSKG-EKVEF--FHDECRCPVYVRDVVKIILALTNRWLSED 236
S ++ +++ G EK D+ P Y RD+ K I + N+ +
Sbjct: 155 ---------SFGKNFVKTMIKLGKEKANLGVIFDQIGSPTYARDLAKTITTIINQGI--- 202
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ N +S + + ++ ++ + P+ + + P +D TK+
Sbjct: 203 --IPGTYNFSNEGVISWFDFTKHIHQLAKITSCKVIPIHTADYPTLAKRPHFSVLDKTKI 260
Query: 297 VQTLNIDPVTYKDGVK 312
+T NI+ ++D ++
Sbjct: 261 KKTYNIEIPYWRDSLE 276
>gi|350562916|ref|ZP_08931739.1| dTDP-4-dehydrorhamnose reductase [Thioalkalimicrobium aerophilum
AL3]
gi|349779782|gb|EGZ34123.1| dTDP-4-dehydrorhamnose reductase [Thioalkalimicrobium aerophilum
AL3]
Length = 321
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 28/303 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLK 62
R+LVVG T LGQ L ++ G+ Y A + L SFV D +DL
Sbjct: 9 NRILVVGKTSQLGQ----SLQKLVGQAYHKQALRLCERSEAISLAGYDFSFVGRDTLDLA 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ S DA + DVV+NCAA + E +P+ A IN + V L+ + + ++
Sbjct: 65 NPSAIDAF-FTHHRFDVVINCAAYTNVDQAELEPELANQINYLA--VKQLAKWAKLHKSF 121
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+S+D V++G + Y E D P+N YG+SK+ +E+ I+R+S ++
Sbjct: 122 LIHISSDYVFDGTATRPYLESDLPNPINCYGQSKLKSEQACLFINPRGVIIRTSWLFS-- 179
Query: 182 TISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIIL---ALTNRWLSE 235
++ ++L G E + D+ P Y D+ + +L A T + S
Sbjct: 180 -------EFGHNFVKTMLRLGVMRETLAVVSDQLGSPTYATDLAQAVLSVIAHTAKSASS 232
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ ++ N G S A+ + E++ L KP+++ + PA ++ K
Sbjct: 233 NMEIYHFTNAG---VCSWYDFAQAIFELKAIDCQL-KPITSEDYAAIAKRPAYTELNNAK 288
Query: 296 LVQ 298
+++
Sbjct: 289 IMR 291
>gi|385266701|ref|ZP_10044788.1| SpsK [Bacillus sp. 5B6]
gi|385151197|gb|EIF15134.1| SpsK [Bacillus sp. 5B6]
Length = 282
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKQ-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|336313027|ref|ZP_08567971.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. HN-41]
gi|335863412|gb|EGM68564.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. HN-41]
Length = 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 23/309 (7%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
+V G TG LG+ +++ L E+ G ++V AT S + L H D
Sbjct: 1 MVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRASDSVHRLDLTHPSEVADF------- 50
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
+ P V+V+CAA P V E +P +A+++N+ +S + + LI++
Sbjct: 51 -----VSRHSPQVIVHCAAERRPDVSEQNPQAALALNLSASQAL--AQAAKANHAWLIYI 103
Query: 127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV 186
STD V++G + Y E+ PVN YG+SK E+ + +FA+LR I+YG + +
Sbjct: 104 STDYVFDGTQPKYAEDAATHPVNFYGESKRKGEEIVLGIDPDFAVLRLPILYG--QVEKL 161
Query: 187 PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+S + I ++ K + R P D+ I L L E +Q + +
Sbjct: 162 SESAVLVLIQQLMDK-RPLGIDDWAVRSPTSTADIANAIDKLIALHLQEST-VQGIYHFS 219
Query: 247 GPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
+ +++ QM + EI ST+ + P S + + P D ++ +L +
Sbjct: 220 AAETMTKYQMLLTLGEILQLSTAHLTPESTPT--DSAKRPRDCTLSCLRLAAMEIRSEMN 277
Query: 307 YKDGVKLTL 315
+ GV+ L
Sbjct: 278 FATGVRQAL 286
>gi|295105609|emb|CBL03153.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
SL3/3]
Length = 278
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G++G ++Q A H+ L P F+ +
Sbjct: 2 KKILVTGAGGFVGSRVMQQW-----------AGHYE-------LCTFPKGFL-------A 36
Query: 64 GSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+G DAV A+ +PDV+++ AA+S C P+ A NV S+ WL+
Sbjct: 37 TAGEDAVRQAVLQQRPDVILHTAAISDTGYCAGHPEQAYRANVELSV--WLARAAAEIGA 94
Query: 122 LLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+ S+DQVY GV+ E + P NVYG+ K+ E+ + C +LR++ +Y
Sbjct: 95 KLVAFSSDQVYAGVEQSGPLPETIPLKPANVYGQGKLEMEQRVQALCPGAVLLRATWMYD 154
Query: 180 -PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
P P+ +LP+ + + +GE V F + R YVR V ++ A
Sbjct: 155 LPGYRLPIRGNLPLNLLRAA-QRGESVRFSVWDFRGITYVRQAVALLEA 202
>gi|253996730|ref|YP_003048794.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8]
gi|253983409|gb|ACT48267.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8]
Length = 319
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 20/253 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD+++N AA + E++PD A +IN + V L+ IH STD VY G
Sbjct: 72 QPDLIINPAAYTAVDKAESEPDLAYAINATAPGV--LAEEAAKLGAKFIHFSTDYVYAGN 129
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E+D AP+++YGKSK+A E+ + I R+S +YG K+ +
Sbjct: 130 KIGVYVEDDATAPLSIYGKSKLAGEEAVRAVGLPSLIFRTSWVYGAYG-----KNF-LHT 183
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP------ 248
I + + E++ D+ P + + ++ + RW E + L+N G
Sbjct: 184 ILRLAKEREQLRIVADQIGAPTSSHSIAQAVVEVLARWDGEHSGVYHLVNAGRTTWHGFA 243
Query: 249 ----DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
D +++Q A ++ + I P++ + PA+ +D TKL ++
Sbjct: 244 TAIVDAYAQLQPARDWPMLKA-KVANIGPITTADYPTPAARPANSCLDCTKLSSDFSVQL 302
Query: 305 VTYKDGVKLTLAA 317
++D + L A
Sbjct: 303 PDWRDALMAELEA 315
>gi|310829415|ref|YP_003961772.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
gi|308741149|gb|ADO38809.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
Length = 287
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSE--IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++L+ G G LG+ L+ + IE YDV P+L D+
Sbjct: 2 KILITGSNGQLGRQLITECKKRSIEYVGYDV---------PEL--------------DIT 38
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ +V K PD+++NCAAL+ CE + A ++N P +L + ++NK+
Sbjct: 39 NIKLVQSVVEK-ESPDIIINCAALTDVDGCERNAKLAFAVNAYGPKNL----AEISKNKD 93
Query: 121 NLLIHLSTDQVYEGVKSF-------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
LL+HLSTD V++G F Y E D P VYGKSK A E F+ + S + I+R
Sbjct: 94 ILLVHLSTDYVFDGQGVFENGHKRPYVESDCTNPKTVYGKSKKAGEDFVVDNTSKYFIIR 153
Query: 174 SSIIYG 179
S+ +YG
Sbjct: 154 SAWLYG 159
>gi|416051356|ref|ZP_11577404.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|444334890|ref|ZP_21150300.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|5545319|dbj|BAA82534.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus
actinomycetemcomitans]
gi|347992789|gb|EGY34166.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|443549762|gb|ELT58405.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 292
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGHCLTQ---QLQGK-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 SAVKKTVKNF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D P ++YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDATDPQSIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGKSVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKVPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 272 VFGIQPSDWQRALK 285
>gi|295100776|emb|CBK98321.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
L2-6]
Length = 281
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 4 KRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
KRVLV G G++G +L +G + P D T + + + +L
Sbjct: 2 KRVLVTGAGGFVGARILDMWRGQFALCAFPSDTLRTADESAVLRFILKE----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
PDV+V+ AALS + C+ +P+ + NV L W++ E
Sbjct: 51 ---------------HPDVIVHTAALSNTQYCQQEPEDSFRANV--LLPEWVAKGAEEVG 93
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+ S+DQVY GV + E ++P NVYG+ K+ AE + +C + LR +Y
Sbjct: 94 AKLLSCSSDQVYAGVTQRGALAETLPLSPSNVYGQHKLEAEARVLARCPDAVALRLPWMY 153
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
P P+ +LP+ I GE + F ++ R YVR+V++
Sbjct: 154 DLPGYHLPIRGNLPLN-ILRAAKTGEVLRFSRNDYRGVGYVREVIE 198
>gi|172065131|ref|YP_001815843.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6]
gi|171997373|gb|ACB68290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6]
Length = 314
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 30/326 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHL 229
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---PVSASSVDRGVQSPADIS 290
+ + + + + +++ +A+ +A G +L + P A+ P D
Sbjct: 230 A-GSTVTGIRHWSAEEPMTKYDIAQRIAAALGIDAALARIDTPADATP------RPYDCH 282
Query: 291 MDITKLVQTLNIDPVT-YKDGVKLTL 315
+D + V+ L I+ T + G+++ L
Sbjct: 283 LDAAR-VRALGIEHATPFATGLQVVL 307
>gi|442609481|ref|ZP_21024218.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441748953|emb|CCQ10280.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 291
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 10/229 (4%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
DVV+NC +L CE++ S+N V ++ + LIH S++ VY G
Sbjct: 61 DVVINCISLGDVDACEDNNSLCESLNYE--FVKSIALLQNSLGFHLIHFSSNAVYGGETG 118
Query: 138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
+Y E P+N YGK+K+ A++F+ + + ILR +YG + + P +
Sbjct: 119 YYSESCTKKPINFYGKTKLKADEFLLKNGGDITILRPITMYGLRI--GKQRHNPFSFFCE 176
Query: 198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
+ +G K+ +D +YV D+VK + ++ K + + N+ G +SR
Sbjct: 177 QIKQGNKITAVNDVYVNFLYVEDLVKCV------DIAIRKSIFGVFNLSGEQNLSRAAFV 230
Query: 258 EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
++ S S I VS+ S P D S + +K+ + P T
Sbjct: 231 RLMLSYFPKSDSQINIVSSESFPTKALRPKDTSFNNSKMKKVFGFTPRT 279
>gi|56476692|ref|YP_158281.1| dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1]
gi|56312735|emb|CAI07380.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum
EbN1]
Length = 298
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 29/243 (11%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PDV++N AA + E+D +A IN P L + + + LL+H STD V++
Sbjct: 50 EPDVIINAAAYTAVDRAESDEAAATLINGVAPGEL----ARVAKRRGALLVHYSTDYVFD 105
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G KS Y E+D +AP+N YG+SK+A E I E + I R++ ++ + +
Sbjct: 106 GTKSAPYDEDDPVAPINAYGRSKLAGELAIGESGCDHLIFRTTWVFAARGGN-------- 157
Query: 193 QWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDKQMQL---LLNVG 246
++ ++L G + + H D+ P + R++ R +E +Q + N+
Sbjct: 158 -FVRTMLRLGAERDSLHVVADQIGAPTWARNIADATALALARAQAERQQRSFSSGVFNLA 216
Query: 247 GPDRVSRVQMAEVV-AEIR------GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
S AE + A R G + + P+ +S+ PA+ + KL
Sbjct: 217 SRGETSWHGFAEAIFAGARAQLPGIGLKVAAVAPIPSSAYPTPAARPANSRLAAGKLQAR 276
Query: 300 LNI 302
I
Sbjct: 277 FGI 279
>gi|398848281|ref|ZP_10605104.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM84]
gi|398248805|gb|EJN34203.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM84]
Length = 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 109/236 (46%), Gaps = 12/236 (5%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ P++++N AA + E++PD+A ++N + V L+ LIH STD
Sbjct: 45 ALRRLAPNLIINAAAYTAVDQAESEPDTAYAVNAEAPRV--LAEEAVRLGAPLIHYSTDY 102
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D+ P+++YG+SK+A E+ I ILR+S +Y S ++
Sbjct: 103 VFDGYKATPYTEADQPNPLSIYGRSKLAGEQAITAVDGEHLILRTSWVY-----SLYGRN 157
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD 249
+ + +L + +++ D+ P + + AL RW + ++
Sbjct: 158 FLLT-MQRLLQEKPQLKVVDDQIGAPTWAATIAASTRALIERWQAGQAGAWGTYHLTAQG 216
Query: 250 RVSRVQMAEVVA---EIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S A+ +A E RG + + P+ + P + +D T+L + +I
Sbjct: 217 ETSWFGFAQAIAAQLEARGLPCAELLPIPTREYPTPARRPLNSRLDCTRLAREWDI 272
>gi|326799491|ref|YP_004317310.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
gi|326550255|gb|ADZ78640.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
Length = 287
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V+GG G LGQ LQ + E D A S+ + D+ +
Sbjct: 3 KIIVLGGQGQLGQ-CLQSVCE------DKAMVFLSSK----------------EADISNE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + +++ P ++NCAA + E++ + A IN + + L+ + + +LI
Sbjct: 40 AQLEQWFIQYN-PSHIINCAAYTAVDKAEDEKEEASKINTIAPGI--LARLCKRFDAILI 96
Query: 125 HLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG ++ EE IA P VYG++K+ E I + + I+R+S +Y
Sbjct: 97 HISTDFVFEGNQTGLLEETSIANPTGVYGQTKLDGETTIQQIWNKHIIIRTSWLYSEYAN 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + E+++ D+ P Y RD+ +++ + + ++ED+ L
Sbjct: 157 NFVKTMLRLA------QDREELKVVADQVGTPTYARDLAEVLCKIIDNNITEDEYG--LY 208
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ S A V E+ + L P+ + + PA MD +K+ + N+
Sbjct: 209 HYSNEGVASWYDFAYAVFELSNTNIRLF-PIKTADFPTKAKRPAYSVMDKSKIKKQFNLV 267
Query: 304 PVTYKDGVKLTL 315
++D +K L
Sbjct: 268 IPNWRDSLKNCL 279
>gi|374630955|ref|ZP_09703335.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera yellowstonensis
MK1]
gi|373526513|gb|EHP71264.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera yellowstonensis
MK1]
Length = 258
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 115/238 (48%), Gaps = 10/238 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+++ A S CE + A +N ++ V ++ + ++ +S+D V++G
Sbjct: 17 RPKVIIHAGAFSNADYCELNKSEASLVNQMATEV--IAREARRLNSFIVFVSSDYVFDGK 74
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y EED PVN YG +K+ AEK I + +AI+R + IYGP + + ++ + WI
Sbjct: 75 SGSYTEEDVPNPVNHYGLTKLKAEKAIESETQEYAIVRPATIYGPWD-ARLKENFAL-WI 132
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
L+ G+ + D+ P + ++I +T R Q+ +++ +S+ +
Sbjct: 133 LRNLAGGQTIRLVIDQIASPTLNLGLARMIHEITRR------QIHGIIHTTDDVSISKYE 186
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 313
+A++ + I PV+ S+ + P + S+++ K + L P+T ++L
Sbjct: 187 FGIRLAKLFDLDVNRIIPVTMDSMGWIARRPKNSSLNVGKAKRVLKNGPMTLDKALEL 244
>gi|398926497|ref|ZP_10662493.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM48]
gi|398170764|gb|EJM58692.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM48]
Length = 289
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 12/248 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAVAPGI--LAEEARALDIPLIHYSTDYVFDGM 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D P+ VYGKSK+A E+ I + ILR+S +Y + + L +Q
Sbjct: 108 KAGPYTEDDAPNPLGVYGKSKLAGEQAIRDIQGKHLILRTSWVYSTHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + LAL RW + + ++ S
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTIANSTLALIERWQANEVANWGTYHLTAQGETSWF 221
Query: 255 QMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E +G + + P+ +S P + +D ++L + + ++ +
Sbjct: 222 GFAQAIGEELRQQGKPCADLLPIPSSDYPTPAARPLNSRLDCSRLQRDWGVSQPDWQTAL 281
Query: 312 KLTLAAEA 319
+ LA ++
Sbjct: 282 RECLAEQS 289
>gi|416043670|ref|ZP_11574728.1| dTDP-6-deoxy-L-lyxo-4-hexulose redactase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|7592817|dbj|BAA94404.1| dTDP-6-deoxy-L-lyxo-4-hexulose redactase [Actinobacillus
actinomycetemcomitans]
gi|347996976|gb|EGY38012.1| dTDP-6-deoxy-L-lyxo-4-hexulose redactase [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
Length = 292
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++G+ +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGYCLTQ---QLQGR-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ + ++
Sbjct: 41 SAVKKTVENF-RPDVVINAAAHTAVDRAETEVERSEAINVKGP--QYLAETAKSVDAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G + YKE D P +YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRSAGKYKETDAADPQGIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGN 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ + +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGESVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKAPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 272 AFGIQPSDWQRALK 285
>gi|91794012|ref|YP_563663.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217]
gi|91716014|gb|ABE55940.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217]
Length = 291
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 142/317 (44%), Gaps = 42/317 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G L++ L T L L LD +D+
Sbjct: 2 RILITGKNGQVGSCLVELLDA-------------ETDLTFLALDREQ-------LDITDA 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN- 121
+ V +F +PD+++N AA + E + + A +IN P +L + N N
Sbjct: 42 NEVSKVVAEF-KPDIIINAAAYTAVDRAEKECELAYAINRDGPYNL-----ALAANDVNA 95
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+IHLSTD V+ G S Y E D+ P + YG+SK+A E+ + CS ILR++ ++G
Sbjct: 96 LIIHLSTDYVFSGNSSESYVESDKTGPQSEYGRSKLAGEQAVVLACSRHIILRTAWVFGE 155
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ V L + + ++ D+ P Y D+ K ILA++N+ + ++
Sbjct: 156 HGNNFVKTMLRLA------KTRDTLDVVADQFGGPTYAGDIAKAILAISNQVMKGNQAYG 209
Query: 241 LLLNVGGPDRVSRVQMAEVV---AEIRGY--STSLIKPVSASSVDRGVQSPADISMDITK 295
+ G P VS A+ + A +G+ +T ++P++ + PA+ +D K
Sbjct: 210 VYHYSGFP-HVSWYDFAKTIFSTALQQGFLKNTIQVRPITTLDYLTPAKRPANSRLDCHK 268
Query: 296 LVQTLNIDPVTYKDGVK 312
+ I+ ++ +K
Sbjct: 269 INIAFVIEQSDWQSALK 285
>gi|33637051|gb|AAQ23688.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus]
Length = 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK ++LV G G LG +++ L ++E + Y Q + + H
Sbjct: 1 MSKHKILVTGAKGQLGAEMVKLLKDMEYEVYGYGRAELDITDFQQVKSVIDHI------- 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
P+VV++ AA + E++PD A +N + ++S E+
Sbjct: 54 ---------------HPNVVIHAAAYTNVDAAESEPDQAFFVNAYGTRNVVVAS--EHIG 96
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+++STD V++G + Y E +P++VYGKSK+A E+F+ + S F I+R+S +YG
Sbjct: 97 AKFVYISTDYVFDGTANAPYNEFAFTSPISVYGKSKLAGEQFVRDLHSKFFIIRTSWVYG 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKIILALTN 230
+ V L + E+ E F D+ CP Y D+ I L +
Sbjct: 157 KHGNNFVKTMLKL--------AQEQKELFVVDDQIGCPTYTVDLASCIFQLIH 201
>gi|266620908|ref|ZP_06113843.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479]
gi|288867425|gb|EFC99723.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479]
Length = 286
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 46 LLDALPHSFVFFDVDLKSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSIN 103
LL+ P + D+D + AV G +P +VNCA L+ +CE + + A +N
Sbjct: 23 LLENTPVELLLTDLDAVDITDPKAVRDYAGMNRPHFIVNCAGLTDVAMCEENKEEAFKVN 82
Query: 104 VPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFI 162
+ LS + +I LSTD V++G ++ Y E D P VYGKSK+A E F+
Sbjct: 83 ALGA--RNLSVAARMGKARMIQLSTDDVFDGSGQTPYTEFDTPNPQTVYGKSKLAGENFV 140
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
E C+ I+RSS I+G + S K L + +G+ + D+ P ++
Sbjct: 141 KEFCNRHIIVRSSWIFGEGS-SYFSKILKLA------GEGKTIYAASDQTAAPTGASELA 193
Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSAS 277
+ I+ L D L +V G SR + A+ + + G+ ++ PV+A+
Sbjct: 194 EKIIELM------DSAPDGLYHVTGQGSCSRFEFAQEIVRLSGHKAEVV-PVAAA 241
>gi|110635097|ref|YP_675305.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1]
gi|110286081|gb|ABG64140.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1]
Length = 295
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 28/179 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDLK 62
++LV G G L + LL D AA H P L LD A P ++DL
Sbjct: 2 KILVTGKNGQLARSLL-----------DRAARH-----PHLALDFAARP------ELDLA 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A A+ PD+VVN AA + E++P+ A ++N + ++ T +
Sbjct: 40 DPRTI-APAIARHAPDLVVNAAAYTAVDQAEDEPELAHAVN--GAAAGLIARATAARGIP 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V++G + Y+EED + P++VYG SK+A E+ + E+ + ILR++ +Y P
Sbjct: 97 LIHISTDYVFDGALARPYREEDPVNPLSVYGASKLAGERAVREQNPDHLILRTAWVYSP 155
>gi|374849502|dbj|BAL52516.1| dTDP-4-dehydrorhamnose reductase [uncultured Bacteroidetes
bacterium]
Length = 303
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 67 FDA--VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
FD ALK +P+ ++N + CE D A +NV P L +F +
Sbjct: 56 FDGYKTALKEFKPNAIINTIGYTDVDGCETDRALAQMLNVRFPEMLARVARTFDVH---- 111
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+H STD V++G Y E P+N YGK+K+A E I I+R++++YG
Sbjct: 112 LVHYSTDYVFDGSAGPYDETQLPNPINYYGKTKLAGENAIRSTGCAATIIRTNVVYG--- 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
KS ++W+ ++ + D+ P Y D LAL E ++ L
Sbjct: 169 FGGTSKSDFVEWVIRSVTANIPIRAAVDQFSNPTYSGD-----LALATAKFVE-RRRSGL 222
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
++GG D SR A +A LI+PV+ + + P
Sbjct: 223 YHIGGADYCSRYDFARAIARAFDLRPDLIEPVTTQQLQQKAPRP 266
>gi|396492440|ref|XP_003843799.1| similar to NAD dependent epimerase/dehydratase family protein
[Leptosphaeria maculans JN3]
gi|312220379|emb|CBY00320.1| similar to NAD dependent epimerase/dehydratase family protein
[Leptosphaeria maculans JN3]
Length = 282
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 25/247 (10%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P VVV+CAA P C DP++A+ +NV SS L+ T + LI++STD V+ G
Sbjct: 24 KPKVVVHCAANRFPDSCTADPEAAVKLNVESSRS--LAEATVARGIFLIYISTDYVFSGR 81
Query: 136 --KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN------FAILRSSIIYGPQTISPVP 187
++ YK + +P NVYG++K+ EK + + N +LR ++YG + P
Sbjct: 82 PDEAPYKVDSPTSPPNVYGQTKLDGEKAVLQVARNSGARNIVVVLRVPVLYGS---ADEP 138
Query: 188 KSLPIQ------WIDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWL---SEDK 237
K + W ++ G+ K++ R P +DV ++ + +L + D+
Sbjct: 139 KDSAVNVLMSQLWAAQNIAPGQPKIQVDDYALRYPTNTQDVGRVCRDIAKVYLDPANADR 198
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDR-GVQSPADISMDITKL 296
+ +L D +++ Q+ + AEI G ++PV + G P D +D + L
Sbjct: 199 NLPQILQFSSEDCMTKWQICQKFAEIMGLPLDNMEPVKPEEDTKDGTVRPYDCHLDTSAL 258
Query: 297 VQTLNID 303
+ L ID
Sbjct: 259 -KELGID 264
>gi|425896972|ref|ZP_18873563.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397884258|gb|EJL00744.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 289
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 18/251 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + +++PD A +IN + V F E L LIH STD V+
Sbjct: 50 RPQLIINAAAHTAVDQAQSEPDLAFAINASAPEV-----FAEEARELGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K Y E+DE P++VYG+SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKQAPYTEDDEPNPLSVYGQSKLAGERAIGAAGGEHLILRTSWVY-----SNTGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + + D+ P + + AL RW + ++
Sbjct: 160 LT-MQRLLQEKPHLRVVADQIGAPTWAGTIAASTAALIERWQAGQPGAWGTYHLTAAGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E +G + + ++ + +S+ P + +D +L + + ++
Sbjct: 219 SWFGFAQAIGEHLLAQGKACATLEAIPSSAYPTPAPRPLNSRLDCRRLEREWGVRQPEWR 278
Query: 309 DGVKLTLAAEA 319
+ LA +
Sbjct: 279 SALHECLAGQG 289
>gi|386721118|ref|YP_006187443.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus K02]
gi|384088242|gb|AFH59678.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus K02]
Length = 283
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+++CAA + E+D D A +N + +++ E + L ++STD V++G
Sbjct: 50 RPDVIIHCAAYTAVDQAESDVDGAYLVNAVGT--RNMAAAAEKVGSKLCYISTDYVFDGK 107
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D+ P +YGKSK A E+ CS + I+R+S +YG + V L +
Sbjct: 108 GTSPYREYDKTNPSGIYGKSKEAGEQLAMSLCSRYFIVRTSWVYGLHGNNFVKTMLKLS- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++++ HD+ P + D+ +LAL +E + N G S
Sbjct: 167 -----EDRDRLKVVHDQIGSPTFTEDLAGFLLALVG---TEKYGIYHASNSG---ICSWY 215
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ A+ + E G +T +++P + R P+ MD
Sbjct: 216 EFAKAIFEESGKAT-IVEPCTTDEFPRPAPRPSYSVMD 252
>gi|406927136|gb|EKD63212.1| hypothetical protein ACD_51C00316G0007 [uncultured bacterium]
Length = 298
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 49/327 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + ++L+ GG+G++G +L+ L ++ + +++A + + LD + D
Sbjct: 1 MQESKILITGGSGFIGTNLIIELQKLGFEIVNLSAHDPIVSVKTIKLDLINDDLSVLD-- 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+F D VV+ AA+S ++ E + + +NV + L F +
Sbjct: 59 ----------EYRF---DYVVHLAAVSTIKLAEGNEQETIRLNVEGT-KKLLEYFKDKNL 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEE-DEIA--PVNVYGKSKVAAEKFIYEKCSNFA------I 171
I +S+ VY+ V + E+ D + N Y SK+ AEK +C FA I
Sbjct: 105 KKFIFMSSMTVYQEVDTEMTEDLDALVDKKSNAYSYSKLLAEK----ECEKFAKKMPILI 160
Query: 172 LRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVVKIILALT 229
R + YGP Q I VP +P Q I ++ K+E ++ D R +YV DVV I+
Sbjct: 161 FRLANAYGPYQRIGKVPTLIP-QIISQAIAG--KIEIYNGDFARDFIYVTDVVNAIM--- 214
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADI 289
+ L D L L G P +V +++A+ VA I G V S + + + +P ++
Sbjct: 215 -KGLKSDFTGTLNLGTGKPTKV--MEIAKTVANIFG--------VEVSDLRKKINAPLEL 263
Query: 290 SMDITKLVQTLNIDP-VTYKDGVKLTL 315
++ ++ +TL P ++ ++G+K T+
Sbjct: 264 VPNVVRIKETLKWKPEISLEEGIKNTI 290
>gi|291540641|emb|CBL13752.1| RmlD substrate binding domain [Roseburia intestinalis XB6B4]
Length = 178
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 3 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 36
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 37 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 93
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 94 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 152
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 153 IFRTAWLYG 161
>gi|206561476|ref|YP_002232241.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315]
gi|198037518|emb|CAR53455.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315]
Length = 307
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 40/240 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K +LV G G +G L++ L + GK VAAT DVD
Sbjct: 9 KPTILVTGANGQVGWELVRALQPL-GKV--VAATRS-------------------DVDFA 46
Query: 63 SGSGFDAVAL-KFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DA A+ +F + PD+V+N AA + EN+PD+A ++N + +
Sbjct: 47 -----DAAAVGRFVETVAPDIVINAAAYTAVDRAENEPDAAFAVNRDAVRAM--ARVAAA 99
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +LL+H STD V++G K Y E D+I P+NVYG SK+A E+ + + ++ + R+S +
Sbjct: 100 RGSLLVHFSTDYVFDGSKQAPYSESDDIGPLNVYGASKLAGEQAVADIGGDWLVFRTSWV 159
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y + + + L + + E + +D+ P R + + + + L+E +
Sbjct: 160 YASRGQNFLRTMLRLG------TSREALSVVNDQYGAPTSARTIADLTVHAIAKSLAERR 213
>gi|170724102|ref|YP_001751790.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619]
gi|169762105|gb|ACA75421.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619]
Length = 286
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P++++N AA + E++PD+A +IN + V L+ LIH STD V++G K
Sbjct: 51 PELIINAAAYTAVDQAESEPDTAFAINAQAPGV--LAEEALRLGAPLIHYSTDYVFDGEK 108
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y E+D P+ VYG+SK+A E+ I ILR+S +Y ++ L +Q
Sbjct: 109 AAPYTEQDVPNPLGVYGRSKLAGEQAIAAVGGAHLILRTSWVY---SLHGRNFLLTMQ-- 163
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+L + ++ +D+ P + + AL RW + ++ + S
Sbjct: 164 -RLLQEKPQLRVVNDQIGAPTWASTIALSTRALIERWQAGRAGAWGTYHLTAQGQTSWFG 222
Query: 256 MAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A+ + E RG + + P+ +S + PA+ +D ++L + ++
Sbjct: 223 FAQAIGEQLKARGLPCAELLPIPSSEYPTPARRPANSRLDCSRLAREWDV 272
>gi|411116892|ref|ZP_11389379.1| dTDP-4-dehydrorhamnose reductase [Oscillatoriales cyanobacterium
JSC-12]
gi|410712995|gb|EKQ70496.1| dTDP-4-dehydrorhamnose reductase [Oscillatoriales cyanobacterium
JSC-12]
Length = 295
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G+ L Q L TPL ++ + D L
Sbjct: 3 RILLTGANGQVGEELRQTL----------------TPLGEV---------ISVDRTLWDM 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S DA+ ++ QP+++VN AA + E++P+ A ++N ++ V E E L
Sbjct: 38 SEPDAIRPVVQTVQPNLIVNAAAYTAVDKAESEPELAHAVNGKAAQV-----IAEEAEKL 92
Query: 123 ---LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIH+STD V++G S Y E D P+ VYGKSK+ E+ + + C I+R++ +Y
Sbjct: 93 GAGLIHISTDYVFDGKHSSPYLETDSTNPLGVYGKSKLLGEEVVRQHCQKHMIIRTAWVY 152
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G Q K++ V ++ +++ D+ P + +D+ I L
Sbjct: 153 GIQGKGNFVKTML-----RVGAQRDELRVVTDQIGAPTWAKDLASAIAHL 197
>gi|317484421|ref|ZP_07943336.1| RmlD substrate binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316924340|gb|EFV45511.1| RmlD substrate binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 285
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++F PDV+ N + + E P A+S+N L +L + L+H S+DQV
Sbjct: 50 IEFINPDVIFNTVSWNTENPAEKQPQEALSVN--RGLPAFLGGLVKGTPRFLVHYSSDQV 107
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKS 189
+ G K S Y EED+ P++ GKS++A E+ + E N I+R+ ++GP S
Sbjct: 108 FNGRKDSPYTEEDKADPISPCGKSRLAGEQALLELNADNICIIRTGWLFGPDGDS----- 162
Query: 190 LPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILAL 228
++ +L + + VE HD+ P Y +D+ + L L
Sbjct: 163 ----FLKRLLGRAKTEGTVEVIHDQIGSPTYAKDLAQATLQL 200
>gi|375364221|ref|YP_005132260.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371570215|emb|CCF07065.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|443471294|ref|ZP_21061367.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas pseudoalcaligenes
KF707]
gi|442901197|gb|ELS27196.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas pseudoalcaligenes
KF707]
Length = 291
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+++N AA + E +P++A ++N + + L+ + L+H STD V++G K
Sbjct: 51 PDLLINAAAHTAVDQAEREPEAAFALNATAPGL--LAEAAADLGIPLVHYSTDYVFDGEK 108
Query: 137 S-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y EED P+ VYG+SK+A E+ I ILR+S +Y + + L +Q
Sbjct: 109 AGAYGEEDPTHPLGVYGRSKLAGERAIQSVGGEHLILRTSWVYALHGRNFL---LTMQ-- 163
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL-LNVGGPDRVSRV 254
+L + +++ D+ P + + + L + W + ++ L L+ G S
Sbjct: 164 -RLLQERDELRVVDDQVGAPTWAGSIAQATARLVDGWQAGNRHWGLYHLSCAG--ETSWF 220
Query: 255 QMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A +AE G + + P+ +S + P + +D KL + + ++D +
Sbjct: 221 GFASAIAERLKAEGKRCAHLVPIPSSEYPTPARRPLNSRLDCGKLARDWQVRLPDWRDAL 280
Query: 312 KLTLA 316
LA
Sbjct: 281 DACLA 285
>gi|399024628|ref|ZP_10726660.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium sp. CF314]
gi|398080036|gb|EJL70866.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium sp. CF314]
Length = 285
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 38/312 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+++V+G G LG + + + E L + F+F D
Sbjct: 2 KKIVVIGSNGQLGNCIRKIAPDFE----------------------LDYEFIFTDSQTLD 39
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ D V F +PD +N +A + + E + D A ++N V +L+ + +
Sbjct: 40 ITNEDQVNTFFTNEKPDFCINASAYTAVDLAEKEKDKAFAVNADG--VGYLARKCADFKT 97
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ IH+STD V++G + Y E+D P+ VYG+SK+ E E + ILR+S +Y
Sbjct: 98 IFIHISTDYVFDGETNLCYSEDDFTNPIGVYGESKLKGEDLALEANAKTIILRTSWLYSE 157
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ V L ++ S+ +++ D+ P D+ + I+ + + +K
Sbjct: 158 FNKNFVKTML------NLFSQKDELGIVSDQFGQPTNANDLAEAIMNIVE---NPEKTFG 208
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ P+ + + A+ +AE+ G S L P++ + P +M + K+ +
Sbjct: 209 IFHFSNYPE-TTWFEFAKKIAELSGSSVKL-NPLTTEQYPTPAKRPKRSTMCMDKIEEAY 266
Query: 301 NIDPVTYKDGVK 312
NI+P +++ ++
Sbjct: 267 NIEPKYWENSLE 278
>gi|394991339|ref|ZP_10384145.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 916]
gi|393807870|gb|EJD69183.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 916]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|126654758|ref|ZP_01726292.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp.
CCY0110]
gi|126623493|gb|EAZ94197.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp.
CCY0110]
Length = 292
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +GQ L Q LS I +V AT+ +DL S
Sbjct: 3 KILLTGSDGQVGQDLQQTLSPIG----EVIATNRQ------------------QLDLTSP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V K QPD+++N AA + E++ D A ++N + + ++ + L+
Sbjct: 41 DNIRQVIQKI-QPDIIINSAAYTAVDKAESESDLAFAVNGVAPAI--IAEEAKKIGAFLL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K+ Y E D P+ VYGKSK+A E+ I + + ILR++ +YG +
Sbjct: 98 HISTDYVFDGKKNTPYLETDITHPLGVYGKSKLAGEQGIEKNGDRYVILRTAWVYGTEGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQMQLL 242
K++ + + E++ D+ P + D+ I LT L+E +++
Sbjct: 158 GNFVKTML-----RLGQQKEQLGIVSDQVGSPTWSYDIANTISQILTKLNLAETREIYHF 212
Query: 243 LNVG 246
N G
Sbjct: 213 TNSG 216
>gi|452857407|ref|YP_007499090.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452081667|emb|CCP23438.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 282
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|364284985|gb|AEW47973.1| GHF1 protein [uncultured bacterium H2_7]
Length = 319
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 141/315 (44%), Gaps = 38/315 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---V 59
+K VLV G G LG + S + LP F F D +
Sbjct: 29 QKNVLVTGAYGQLGSEIKALTSRMN----------------------LPFRFFFTDADTL 66
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ + DA + + ++NCAA + E D + A +INV + V ++
Sbjct: 67 DITDINQIDAFVSDY-KIQYLINCAAYTAVERAETDVEKAAAINVTA--VTHIAQVAVKY 123
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+IH+STD V++G S YKE P++VYGK+K+A E+ + ++ ILR+S +Y
Sbjct: 124 GVKVIHISTDFVFDGTSSVPYKETMAAQPLSVYGKTKLAGEEALQAAGGDWIILRTSWLY 183
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ V K + + + + E++ D+ P Y D+ ++++ + +E+++
Sbjct: 184 SAYGNNFVKKMIRL------MHERERLTVVDDQWGSPTYAADLAEMVIHILQ--FTEEQE 235
Query: 239 MQL-LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + + + + A+ + ++ G ++ + + + + P+ MD++K
Sbjct: 236 WKTGIYHFSNKGETTWFRFAQAIQKLVGITSCELISIQSHEYPSAARRPSYSVMDLSKTT 295
Query: 298 QTLNIDPVTYKDGVK 312
+ +++ +++ ++
Sbjct: 296 SSFHVEIPAWEEALQ 310
>gi|157961263|ref|YP_001501297.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
gi|157846263|gb|ABV86762.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
Length = 363
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 5 RVLVVGGTGYLGQHLLQ--GLSEIEGKPYDVAATHHSTPLPQLL---------LDALPHS 53
R+L+ G G LGQ LL GL+++ VA LP+ L + +
Sbjct: 2 RILITGAAGQLGQALLSIAGLTQVNLAERTVAQQMLVALLPEALECIETTDEVIGVSHQA 61
Query: 54 FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
D+D FD +A PDVV+NCAA + E D D AM IN + L+
Sbjct: 62 LDICDID-SIRKAFDTIA-----PDVVINCAAYNAVDKAEFDIDKAMLINAEGPKL--LA 113
Query: 114 SFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAI 171
+ L+H+STD V++G + Y E+D AP++VYGKSK+ E+++ + S I
Sbjct: 114 GECQRHNIRLVHISTDFVFDGELLRAYTEQDSPAPLSVYGKSKLEGERWVSDILGSKATI 173
Query: 172 LRSSIIY 178
+R+S +Y
Sbjct: 174 IRTSWLY 180
>gi|421729809|ref|ZP_16168938.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407075775|gb|EKE48759.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 282
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|444359915|ref|ZP_21161188.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia BC7]
gi|444368980|ref|ZP_21168764.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|443599916|gb|ELT68157.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|443601235|gb|ELT69385.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia BC7]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 40/240 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K +LV G G +G L++ L + GK VAAT DVD
Sbjct: 4 KPTILVTGANGQVGWELVRALQPL-GKV--VAATRS-------------------DVDFA 41
Query: 63 SGSGFDAVAL-KFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DA A+ +F + PD+V+N AA + EN+PD+A ++N + +
Sbjct: 42 -----DAAAVGRFVETVAPDIVINAAAYTAVDRAENEPDAAFAVNRDAVRAM--ARVAAA 94
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +LL+H STD V++G K Y E D+I P+NVYG SK+A E+ + + ++ + R+S +
Sbjct: 95 RGSLLVHFSTDYVFDGSKQAPYSESDDIGPLNVYGASKLAGEQAVADIGGDWLVFRTSWV 154
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y + + + L + + E + +D+ P R + + + + L+E +
Sbjct: 155 YASRGQNFLRTMLRLG------TSREALSVVNDQYGAPTSARTIADLTVHAIAKSLAERR 208
>gi|419952669|ref|ZP_14468816.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri TS44]
gi|387970714|gb|EIK54992.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri TS44]
Length = 303
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 18/238 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +PD+++N AA + E + + A ++N V E L LIH ST
Sbjct: 46 VRLLRPDLIINAAAYTAVDPAEREREQAFAVNARGPGV-----LAEEAARLGVPLIHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E+D P+ VYG SK+A E+ I ILR+S +Y S
Sbjct: 101 DYVFDGRKPGAYTEQDMPRPLGVYGASKLAGEQAIQAVGGEQLILRTSWVY-----SRHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
K+ + + +L + +++ DE P + R + + A+ RW + + L ++
Sbjct: 156 KNFLLT-MQRLLHERDQLSVVADEIGAPTWARSIARTSAAMIRRWRDGQRALDGLYHLSA 214
Query: 248 PDRVSRVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S A +AE G + I+P+ + + P + +D ++L Q ++
Sbjct: 215 AGETSWYGFACSIAEHLQNEGRLRARIEPIRSQDYPTAAERPLNSRLDCSRLQQDWDL 272
>gi|449544700|gb|EMD35673.1| hypothetical protein CERSUDRAFT_116405 [Ceriporiopsis subvermispora
B]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 28/292 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLKS 63
R++V G +G LG + E +A + + L +L LLD+ VF D +
Sbjct: 2 RIIVTGASGLLGSQIYAAFKNTEHTVLGLAHSRATGELQKLDLLDSKEVEKVFADFN--- 58
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P+ V++CAA P V E +PD +NV L L+ +++ + L
Sbjct: 59 -------------PEWVIHCAAERRPDVAEKNPDGTRKLNVEIPL--HLAQLSKSLKYTL 103
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGPQT 182
I++STD V++G Y PVN+YG++K E + A +LR ++YGP
Sbjct: 104 IYISTDYVFDGTSPPYTPGALTNPVNLYGQTKRDGELAVLGVSDARAVVLRVPVLYGP-- 161
Query: 183 ISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+P + + +++ G+ + H R P V D+ ++ L L +Q+
Sbjct: 162 -TPNNTDSAVNILLDIVADQSGKTYKMDHYATRFPTGVVDIADFLVRLAT--LPPSRQIP 218
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPADISM 291
+L+ + ++ +M + A I G S I P A D P D +
Sbjct: 219 PILHYSASEPFTKYEMCLIFARILGVPHSHIIPDAEAPKGDAATSRPRDCQL 270
>gi|429331149|ref|ZP_19211915.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida CSV86]
gi|428764122|gb|EKX86271.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida CSV86]
Length = 286
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 18/233 (7%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVYE 133
PD+++N AA + E++P +A +IN + + F E L LIH STD V++
Sbjct: 51 PDLIINAAAHTAVDQAESEPQAAFAINATAPGI-----FAEEAARLGVPLIHYSTDYVFD 105
Query: 134 GVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G K Y E+D P+ VYG+SK+A E+ I ILR+S +Y + + L +
Sbjct: 106 GSKQGRYTEDDATNPLGVYGQSKLAGEQAIAAVGGQHLILRTSWVYSTHGRNFL---LTM 162
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
Q +L + ++ D+ P + + L RW + L ++ S
Sbjct: 163 Q---RLLQEKPELRVVADQIGAPTWAGTIAASTRRLIQRWQAGQAGAWGLYHLTAQGETS 219
Query: 253 RVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
A+ + E +G + + P+ +S + P + +D ++L + N+
Sbjct: 220 WFGFAQAIGEQLKAQGRPCANLVPIPSSEYPTPARRPLNSRLDCSRLQREWNV 272
>gi|402697119|gb|AFQ90747.1| methionine adenosyltransferase II beta, partial [Chrysemys picta]
Length = 211
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP V+V+CAA P V E+ D+ +NV +S L+ LI++STD V++G
Sbjct: 37 QPHVIVHCAAERRPDVVESQADAVSQLNVTAS--GNLAKEAAGVGAFLIYISTDYVFDGT 94
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
YKE D P+N+YGK+K+ EK + E A+LR I+YG + + +S
Sbjct: 95 NPPYKESDAPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPILYG--EVENLEESAVTVMF 152
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
D V + H + R P ++DV + L+ +
Sbjct: 153 DKVQFSNKSANMDHWQQRFPTNIKDVACVCRQLSEK 188
>gi|374849339|dbj|BAL52357.1| dTDP-4-dehydrorhamnose reductase [uncultured planctomycete]
Length = 288
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
++DL +G G L +P VV+NCAA + E +P A ++N V L+ E
Sbjct: 32 ELDLAAG-GLATEVLAAYRPQVVLNCAAYNHVDQAEQEPQQAFAVNALG--VRELARACE 88
Query: 118 NKENLLIHLSTDQVY---EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
+ L+H STD V+ G + Y E D+ PVNVYG SK+A E F+ I+R+
Sbjct: 89 KRGVFLVHFSTDYVFGLETGRRHPYTENDQPGPVNVYGVSKLAGEYFVRSITPYHLIVRT 148
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR 231
+YG P +++ +L + H D+ P V D+V +L R
Sbjct: 149 CGLYG----RPGQGGKRTNFVELILHQAATTPILHVVADQVCSPTCVPDLVDAVLQCLER 204
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVS 275
L+ L+++ VS + A+ + ++ S L +P+S
Sbjct: 205 GLTG------LVHLANEGAVSWYEFAQGILQVARLSVEL-RPIS 241
>gi|188997435|ref|YP_001931686.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932502|gb|ACD67132.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 284
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 39/301 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L++G G LG+ L+ L E + DV L L + FD
Sbjct: 2 KYLILGKNGQLGKEFLKTL---ENQKKDVIG-----------LSRLECNITNFD------ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V ++ +PDVV+N AA ++ E A+ +N S V L+ + + LI
Sbjct: 42 -KLNQVLSQY-KPDVVINSAAYNLVDDAEKQYWEAVKVN--SIAVKNLAYLSNVYKFRLI 97
Query: 125 HLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
H STD V++G K Y E+D P+N YGKSK E F+ E+ N+ + R S +YG
Sbjct: 98 HYSTDYVFDGKKENGLYTEDDVPNPLNDYGKSKFMGEIFLREETGNYLLFRVSWVYGEGK 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + K L W + E ++ ++E P R +V I L + D ++ +
Sbjct: 158 QNFIYKLLT--WAKN----NEYLKVAYNEVSVPTSTRTIVDITLK------ALDNDLRGM 205
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
++ SR + A+ + I+ I PVS + + P +M K+ Q LN
Sbjct: 206 FHLTNSGYASRYEWAKEIFRIKKID-KFILPVSKEIFNLPAKRPDFSAMSNRKISQILNT 264
Query: 303 D 303
+
Sbjct: 265 E 265
>gi|385775563|ref|YP_005648131.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A]
gi|323474311|gb|ADX84917.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A]
Length = 274
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G +G LG L + L K Y+ + +DL +
Sbjct: 2 RILITGASGQLGIELSEVLKGDLIKVYNTKEVQGG-----------------YKLDLTNY 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +K +PDV++N A+L+ C + A +N + V + + E LI
Sbjct: 45 SAVEDFIIK-KKPDVIINTASLTDVDKCGIERGLAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKE+D P+N YG SK+ E + + +LR+S ++
Sbjct: 102 HISTDYVFDGEKGLYKEDDLPNPINYYGLSKLLGETYALS-YDDTLVLRTSGVFR----- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L D + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------DYRKTGILN 205
Query: 245 VGGPDRVSRVQMAEVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
V G +R+SRV +A + E G S + V R P D S+DI+K + L++
Sbjct: 206 VAG-ERISRVDLAMKIKEKFNLGGSVKEVDDVKGWVAKR----PFDSSLDISKAKKILSV 260
Query: 303 D 303
D
Sbjct: 261 D 261
>gi|402847356|ref|ZP_10895651.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402266669|gb|EJU16090.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 287
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 5 RVLVVGGTGYLG---QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++LV+G +G LG +H+ QG AT H H +DL
Sbjct: 2 KILVLGASGQLGRCIEHVTQG------------ATDHY------------HFATRETLDL 37
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S + A + G +V++NCAA + E++P+ A +N + + LS TE
Sbjct: 38 SDTSAIEQFATREG-IEVIINCAAYTAVDRAEDEPEQADEVNHLA--IARLSELTERLGI 94
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V+ G S Y E+ P+ VYG++K E+ I ILR+S +Y P
Sbjct: 95 FLIHISTDYVFSGRSSIPYTEDMPTEPIGVYGQTKRRGEEAIQRLAPRHIILRTSWLYAP 154
Query: 181 QTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+ ++ ++L G+ ++ D+ P D+ + I+ + E +
Sbjct: 155 YGAN---------FMKTMLRLGKERPEMRVVFDQVGTPTSALDLARFIVRII-----EHR 200
Query: 238 QMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
Q+ L + S AE + + GYST L P+ +S + P +D +
Sbjct: 201 QLDKTGLYHFSNEGVCSWYDFAEAIFRLSGYSTQL-HPIRSSEYPTRAERPHYSVLDKAR 259
Query: 296 LVQTLNI 302
+ + I
Sbjct: 260 VREAFGI 266
>gi|261202802|ref|XP_002628615.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis
SLH14081]
gi|239590712|gb|EEQ73293.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis
SLH14081]
Length = 331
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS------EIEGKPYDVAATHHSTPLPQLLLDALPHSFVF 56
++ L+ G TG LG+ +L ++ G+ + A+ + + + D L +
Sbjct: 2 QQTALITGATGLLGRQVLNAFQRDSANWKVFGQGFSRASGTADSGVEIVKADLLDEGNIV 61
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
L+ +P+VVV+CAA P C+ +P +A INV ++ L+ T
Sbjct: 62 -------------ALLEQTKPNVVVHCAANRFPDKCDQNPAAARKINVAAT--QSLAQAT 106
Query: 117 ENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF---AI 171
++ LLI++STD V+ G ++ Y + P N+YG++K E + E+ +
Sbjct: 107 SSRSILLIYISTDYVFPGRPGEAPYATSAQTDPPNIYGETKRDGEVAVLEQTRESRLGVV 166
Query: 172 LRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
LR ++YGP Q S ++ + + G ++ R P + DV ++ +
Sbjct: 167 LRVPVLYGPAQQASESAVNVLVDAVWKAQDAGAGIKMDDWAIRYPTHTADVGRVCRDIAV 226
Query: 231 RWL--------------SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA 276
++L E K + +L DR+++ Q+ + +AEI G + PV
Sbjct: 227 KYLAGAGAVGAGAPSNDGELKSLPRILQFSSEDRMTKYQICQKLAEILGLPLPGMIPVRE 286
Query: 277 SSVDRGVQSPADISMDITKL 296
VQ P D + +L
Sbjct: 287 GPKPGEVQRPFDTHLSTEEL 306
>gi|239612427|gb|EEQ89414.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ER-3]
gi|327355230|gb|EGE84087.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ATCC
18188]
Length = 331
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS------EIEGKPYDVAATHHSTPLPQLLLDALPHSFVF 56
++ L+ G TG LG+ +L ++ G+ + A+ + + + D L +
Sbjct: 2 QQTALITGATGLLGRQVLNAFQRDSANWKVFGQGFSRASGTADSGVEIVKADLLDEGNIV 61
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
L+ +P+VVV+CAA P C+ +P +A INV ++ L+ T
Sbjct: 62 -------------ALLEQTKPNVVVHCAANRFPDKCDQNPAAARKINVAAT--QSLAQAT 106
Query: 117 ENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF---AI 171
++ LLI++STD V+ G ++ Y + P N+YG++K E + E+ +
Sbjct: 107 SSRSILLIYISTDYVFPGRPGEAPYAASAQTDPPNIYGETKRDGEVAVLEQTRESRLGVV 166
Query: 172 LRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
LR ++YGP Q S ++ + + G ++ R P + DV ++ +
Sbjct: 167 LRVPVLYGPAQQASESAVNVLVDAVWKAQDAGAGIKMDDWAIRYPTHTADVGRVCRDIAV 226
Query: 231 RWL--------------SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA 276
++L E K + +L DR+++ Q+ + +AEI G + PV
Sbjct: 227 KYLAGAGAVGAGAPSNDGELKSLPRILQFSSEDRMTKYQICQKLAEILGLPLPGMIPVRE 286
Query: 277 SSVDRGVQSPADISMDITKL 296
VQ P D + +L
Sbjct: 287 GPKPGEVQRPFDTHLSTEEL 306
>gi|406964058|gb|EKD89988.1| DTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 295
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV GG G +G ++ S H F F D+
Sbjct: 2 KKILVFGGAGLVGSKFIELFS---------------------------HKFQFLAPDISE 34
Query: 64 GS--GFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSI--NVPSSLVNWLSSFTE 117
D V+ F Q PD V+N AA++ EN S I V + ++ +
Sbjct: 35 IDILNKDQVSKTFEQFNPDTVINFAAITNVEEAENQKQSKEGICFRVNAIGAKNIAEVCK 94
Query: 118 NKENLLIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ + LIH+ST+ V++G K S Y EED+ P+N YG++K+ E+F+ E I+R
Sbjct: 95 SFDKHLIHISTEYVFDGAKAESPYSEEDKPNPINWYGQTKLFGEQFVLESGCFGVIIRIC 154
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+ + + + K + ++D L G ++ D+ P V D+ + L
Sbjct: 155 MPFS--SFYDLKKDVARFFLDK-LKSGSEITAIEDQNITPTSVSDIAHALA------LVA 205
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP--ADISMDI 293
D + + L +V + S + A+++A+ + SLIKP+S +RG ++ + MD
Sbjct: 206 DTKTRGLYHVCSKNSTSPYKFAQLIAQSFNLNASLIKPISFDEYNRGKKAKLLRNSWMDS 265
Query: 294 TKLVQ 298
K Q
Sbjct: 266 AKFTQ 270
>gi|451345063|ref|YP_007443694.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens IT-45]
gi|449848821|gb|AGF25813.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens IT-45]
Length = 282
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYETDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|357009530|ref|ZP_09074529.1| RmlD [Paenibacillus elgii B69]
Length = 297
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 38/273 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G LG+ L++ L G+ +D AA +L LD D K+
Sbjct: 2 KVLITGAGGQLGRDLVRVL----GRRHDCAA------FTRLQLDI---------ADEKAV 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A A +P+V+V+ AA + E + + IN + +S+ T + ++
Sbjct: 43 RRLIAEA----KPEVIVHAAAYTKVDQAEVELEETYRINTIGTGHVAISAETIGAK--MV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y+E+D P++VYGKSK E+F+ C + I+R+S +YG
Sbjct: 97 YVSTDYVFDGTKGEPYEEQDRTNPLSVYGKSKQLGEQFVQAVCPHHFIVRTSWLYGKDGS 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V K L ++ ++ +++ D+ P Y D+ + I R L D+ +
Sbjct: 157 NFVTKVL------ALAARQQELTVVDDQFGSPTYTYDLAECI----GRLLETDRYG--IY 204
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSA 276
+V SR +A+ + E+ GY+ ++P +
Sbjct: 205 HVANRGYCSRWTLAKTILELAGYTGIAVRPARS 237
>gi|186476724|ref|YP_001858194.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
gi|184193183|gb|ACC71148.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
Length = 306
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G +G LG+ + L + + + + T S P+P+ ++P +D++
Sbjct: 3 KVAVIGASGLLGRTIAGEL--VRQQDWQIVQTTFSRPMPE----SVP-------LDIRDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D ++ +P+ +V AA P VCEN+P A ++NV + V ++S + ++
Sbjct: 50 SAVDQF-VERERPNAIVIAAAERRPDVCENNPALARALNVDA--VRAIASAARRHDAWVL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+STD V++G Y+ + +P+N YG+SK+ E+ + + +LR +++GP
Sbjct: 107 SISTDYVFDGTAPPYRYDATPSPINAYGRSKLEGERALADAADLGCVLRLPLLFGP 162
>gi|416068943|ref|ZP_11583019.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348000570|gb|EGY41350.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 292
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++G+ +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGYCLTQ---QLQGR-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ + ++
Sbjct: 41 SAVKKTVENF-RPDVVINAAAHTAVDRAETEVERSEAINVKGP--QYLAETAKSVDAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G + YKE D P +YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRSAGKYKETDAADPQGIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGN 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ + +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGESVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 212 HFTGLPYVSWCDFARAIFDEAVSQNMLEKAPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 272 AFGIQPSDWQRALK 285
>gi|443686642|gb|ELT89839.1| hypothetical protein CAPTEDRAFT_48086, partial [Capitella teleta]
Length = 211
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+VGGTG +GQ + Q L E K + A +++L+
Sbjct: 2 KILLVGGTGLIGQEVQQLLQE---KLINCIAPGRD------------------ELNLEHP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
D+ +LK QPD+V+NCA + P EN+P IN + L+ + L+
Sbjct: 41 ESIDS-SLKNYQPDIVINCAGYNDPVKAENEPSKCFRINRDAMAT--LADCCNRQNTTLV 97
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++ST +V++G+ K Y E+D P V S+ AE+ I E+C ILR S + I
Sbjct: 98 YISTYRVFDGIKKEAYSEKDIPNPSGVLATSRWQAEQQISERCPRHIILRLSWV-----I 152
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S +L ++++ +S+ ++V D+ CP D ++I+A+
Sbjct: 153 SYKRTNL-LKYLLDQISREQEVAVVSDQQGCPTPSEDAARVIVAI 196
>gi|85819127|gb|EAQ40286.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134]
Length = 291
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 35/313 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG G + Q ++E E +V + H S ++D+ S
Sbjct: 9 RLLITGG----GGQVAQAINEEEATFENVTSIHLSKS----------------ELDITST 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S A+ QPDV++N AA + E D + A +N V L+ ++ LI
Sbjct: 49 SSIKK-AIDLHQPDVIINTAAYTAVDAAEEDKEKAFLVNEIG--VKNLAQACKDNGIKLI 105
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEK-FIYEKCSNFAILRSSIIYGPQT 182
H+STD V++G K Y EED P VYGKSK+A E+ I ++AI+R+S +Y
Sbjct: 106 HISTDYVFDGEKPEEYTEEDIPNPTTVYGKSKLAGEQAIINSGLLDYAIIRTSWVYSVYG 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V L + + +++ +D+ P ++ +IL L+N ++ +
Sbjct: 166 SNFVKTMLRLGNVK------DEISVVNDQYGSPTLANNLASVILQLSNVLTIQNAGVYHY 219
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N G + A+ V + S +++ PVS+ P + ++ +K++ L I
Sbjct: 220 TNEG---VTTWYAFAKAVFSYKKMSINVL-PVSSDRFVTKATRPKNSKLESSKIITLLGI 275
Query: 303 DPVTYKDGVKLTL 315
+ V +++ ++ L
Sbjct: 276 ENVPWEESLEKML 288
>gi|172037461|ref|YP_001803962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142]
gi|354553657|ref|ZP_08972963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
gi|171698915|gb|ACB51896.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142]
gi|353554374|gb|EHC23764.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
Length = 293
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +GQ L Q L I +V AT+ +DL S
Sbjct: 3 KILLTGSDGQVGQDLQQTLVPIG----EVVATNRQ------------------QLDLTSP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V + QPD++VN AA + E++ D A +IN + + ++ + L+
Sbjct: 41 NNIRQVIQEI-QPDIIVNSAAYTAVDKAESESDLAFAINAIAPAI--MAEEAKKIGAFLL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ Y E D+ P+ VYG+SK+A E+ I + + ILR++ +YG +
Sbjct: 98 HISTDYVFDGTQNTPYLETDKTHPLGVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTEGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII-LALTNRWLSEDKQMQLL 242
K++ + + E++ D+ P + D+ I LT L+E +++
Sbjct: 158 GNFVKTML-----RLGQEKEQLGIVSDQVGTPTWSYDIANTISQMLTQLNLAETREIYHF 212
Query: 243 LNVG 246
N G
Sbjct: 213 TNSG 216
>gi|86144026|ref|ZP_01062364.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella
blandensis MED217]
gi|85829486|gb|EAQ47950.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella
blandensis MED217]
Length = 289
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 39/315 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+LV G G LGQ L ++ Y P +L D + + DL+
Sbjct: 3 KRILVTGSNGQLGQEL-----QVLASTY-----------PDMLFDFVTRE----EFDLED 42
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
L PD V+NCAA + E++P+ A IN + V L++++ L
Sbjct: 43 EEQL-LTYLNKTTPDYVINCAAYTAVDKAESEPEKATQINAHA--VRLLANWSAEHHAKL 99
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G S Y E P +VYG +K+ E+ I+R++ +Y
Sbjct: 100 VHISTDYVFDGSSSIPYTETAVTNPQSVYGSTKLEGEQAALASNPEVLIIRTAWVYS--- 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQ 240
V + ++ + ++ + + + D+ P Y D+ + IL + + W S
Sbjct: 157 ---VFGNNFVKTMLRLMQERDSLNIVKDQIGSPTYAADLAQAILKILASAHWESG----- 208
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ + R+S + A+ + E+ G + L + S+ + PA ++ K+ Q
Sbjct: 209 -IYHYSNAGRISWYEFAQAIKEVAGLACDL-DGIPTSAYPTPAKRPAYSLLNTQKIQQVY 266
Query: 301 NIDPVTYKDGVKLTL 315
+ YK+ + + L
Sbjct: 267 KVAVPDYKESLTMCL 281
>gi|51246074|ref|YP_065958.1| dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54]
gi|50877111|emb|CAG36951.1| probable dTDP-4-rhamnose reductase [Desulfotalea psychrophila
LSv54]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 45/319 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G +G+ L + LS GK ++ T+ S LD V LK+
Sbjct: 2 RILVTGSGGQVGKCLCRQLS---GK-VELLTTNRSE------LDITCQKAV-----LKTV 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+GF QPD+++N + + E + + A +N + +L L+
Sbjct: 47 TGF--------QPDIIINATGYTAVDLAEENSEEAYRVNQDGA--KFLGQAATAVGAALL 96
Query: 125 HLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H+STD V+ G KS Y E +E P+ VYGKSK+A EK + C ILR+S ++
Sbjct: 97 HISTDYVFSGEKSRDESYSEGEEPGPLGVYGKSKLAGEKAVANTCKRHIILRTSWVF--- 153
Query: 182 TISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
++ ++++ G+K + D+ P Y D+ ++ + + E+
Sbjct: 154 ------SEYGRNFVKTMIALGQKHDSLSIVSDQYGGPTYAGDIASALITIAEKISDENFC 207
Query: 239 MQLLLNVGGPDRVSRVQMAEVV---AEIRGY--STSLIKPVSASSVDRGVQSPADISMDI 293
L + G ++ A+V+ AE + +I VS+ + P + +D
Sbjct: 208 QWGLYHFAGQPFMNWSGFAKVIFSEAERENLLPAEPVINNVSSEQYPSLAKRPGNSQLDT 267
Query: 294 TKLVQTLNIDPVTYKDGVK 312
+KL I P ++ ++
Sbjct: 268 SKLTAQFGISPSDWQQALR 286
>gi|304310332|ref|YP_003809930.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1]
gi|301796065|emb|CBL44269.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 133/318 (41%), Gaps = 34/318 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +G L + L+ PL +++ AL + DL +
Sbjct: 2 KLLIFGKNGQVGWELQRSLA----------------PLGEVI--ALGQNEANLCGDLSNL 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G A L+ PDV+VN AA + E++PD A IN + V ++ + LL+
Sbjct: 44 EGLRAT-LQRVAPDVIVNAAAHTAVDRAESEPDLAYRINAEAPSV--MAEEAQRLGALLV 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD VYEG + F++E D AP+N+YGKSK+A ++ I I R+S +Y +
Sbjct: 101 HYSTDYVYEGSGERFWQESDAPAPLNLYGKSKLAGDQAIMASGCRHLIFRTSWVYAARGN 160
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-ALTNRWLSEDKQMQLL 242
+ L + + LS D+ P + + A+ L KQ
Sbjct: 161 NFAKTMLGLARTRNALS------VVSDQVGAPTGAELIADVTAQAIYQALLDPQKQGLYH 214
Query: 243 LNVGGP----DRVSRV-QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
L G D V +A + E S + P+++S + Q P + + KL
Sbjct: 215 LVASGSTSWFDYAREVFSVARELGETLQLSDDAVTPIASSEYPKPAQRPLNSRLCTQKLT 274
Query: 298 QTLNIDPVTYKDGVKLTL 315
T + +K GV L
Sbjct: 275 NTFQLTLPDWKVGVARML 292
>gi|384081764|ref|ZP_09992939.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium HIMB30]
Length = 318
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 20/239 (8%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLST 128
A++ +PD VVNC S E+DP IN +P SL F + LI LST
Sbjct: 66 AIRMRRPDFVVNCMVESGVDRAESDPTECRQINHDLPVSLAIACREF----DATLIQLST 121
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D +++G K Y E+D P+N++G++++ AE+ I ILR S ++ P S V
Sbjct: 122 DYIFDGQKDIAYFEDDAPNPLNLFGQTRLEAERDIENLLDQHIILRVSHLFAPSGNSFVT 181
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L I+S L DE CP + D+ ++I A+ ++ + + +VG
Sbjct: 182 NLLDRARIESELP------MIQDERGCPTSIYDIGRVISAVIDQLHA---GAYGVFHVGC 232
Query: 248 PDRVSRVQMAE-VVAEIRGY---STSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S +++ E ++A+ R + + I +S S++ + P + + KL+ T I
Sbjct: 233 QGDASWMELGECIIAQARQFEDLAVEEIVGISGQSINGRAERPRRLVLSTRKLLYTFGI 291
>gi|335043563|ref|ZP_08536590.1| dTDP-4-dehydrorhamnose reductase [Methylophaga aminisulfidivorans
MP]
gi|333790177|gb|EGL56059.1| dTDP-4-dehydrorhamnose reductase [Methylophaga aminisulfidivorans
MP]
Length = 292
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
PD++VN AA + EN+ + A +N + + L+ + ++ LIH STD V+ G
Sbjct: 51 PDLIVNAAAYTAVDRAENEQELAYKVNALAPQI--LAEVAKKRDIPLIHYSTDYVFNGSG 108
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ EE E P+NVYG++K+A E I + I R+S +YG + + + ++ I
Sbjct: 109 DKAWTEEAETQPLNVYGRTKLAGELAISSATDKYLIFRTSWVYGARGANFL-NTMKRLAI 167
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL---LLNVGGPDRVS 252
D V ++ HD+ P + R + + + ++ + Q + ++ G S
Sbjct: 168 DKV-----QLSIVHDQIGAPTWSRHIADVTAQVVSQSYQQADFWQKHSGIYHLSGAGSAS 222
Query: 253 RVQMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
AE + + +G+S + P++ PA+ +D KL Q + +K
Sbjct: 223 WFDFAEQIFHLMAEQGHSVPKLHPITTRDYPTPANRPANSLLDNRKLKQHFGLALPDWKT 282
Query: 310 GVKLTLAAE 318
++ ++ +
Sbjct: 283 SLEWVMSGQ 291
>gi|422321838|ref|ZP_16402883.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54]
gi|317403268|gb|EFV83786.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54]
Length = 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 25/256 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + + D AM IN ++ LS+ + L++H S+D V++G
Sbjct: 52 KPDVIVNAAAFTAVERAQEDGVRAMRINAEAA--GELSALAAERGALIVHYSSDYVFDGA 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D AP+NVYG+SK+A E+ + + R+S +YG V + ++
Sbjct: 110 KPGAYDERDTPAPLNVYGRSKLAGEQAVRAMNPAHLVFRTSWVYG------VFGNSFLKT 163
Query: 195 IDSVLSKGEKVEFFHDECRCP---VYVRDVVKIILALTNRWLSEDKQMQL---LLNVGGP 248
+ L + E + D+ P Y+ D ++LA R+L+ L ++
Sbjct: 164 MLMALRQPETLRVVSDQRGAPTGAAYIADATALVLA---RYLARPADEAFPFGLYHLAAT 220
Query: 249 DRVSRVQMAEVVAE---IRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLN 301
S + A +A+ G + +L I+ V + + P + +D L +T
Sbjct: 221 GDASWHEYACFIAQQARRAGLAVTLTPADIRAVPSDQYPTTARRPLNSRLDSRLLERTFG 280
Query: 302 IDPVTYKDGVKLTLAA 317
I ++DGV LAA
Sbjct: 281 IRAPHWEDGVTHALAA 296
>gi|307153969|ref|YP_003889353.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
gi|306984197|gb|ADN16078.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
Length = 294
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L++G G LGQ L L+ PL +++ S +DL
Sbjct: 2 KRILLLGSNGQLGQELQTTLA----------------PLGEII------SVARDQLDLTQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + P+++VN AA + E++ + A ++N + + L+ ++
Sbjct: 40 TESIRQLIAQV-HPEMIVNAAAYTAVDKAESETELAYAVNEIAPKI--LARESQKLAATF 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G + E DE P+ VY KSK+A EK I E C + ILR++ +YG
Sbjct: 97 LHVSTDYVFDGTRGIPLTETDETNPIGVYAKSKLAGEKAIAENCERYIILRTAWVYGTYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+L + ++ E++ D+ P + +D+ I L
Sbjct: 157 KSNFVKTLL-----RLGAEREQLRVVADQVGTPTWAKDIADAIAKL 197
>gi|269102101|ref|ZP_06154798.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161999|gb|EEZ40495.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 296
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +++N AA + E + D + +IN L +L+ EN L+H+STD V+ G
Sbjct: 52 KPHIIINAAAHTAVDKAETEVDLSYAINRDGPL--YLAQAAENVGATLLHISTDYVFSGD 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P VYGKSK+A E + + CS ILR++ ++G + + V L +
Sbjct: 110 KDGMYIETDTVDPQGVYGKSKLAGENAVLDNCSRSIILRTAWVFGEEGNNFVKTMLRLA- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ +++ D+ P Y RD+ ++++ ++E +L
Sbjct: 169 -----QQRDELGIVADQFGGPTYARDIATALISIARTIIAEGSNFEL 210
>gi|398921271|ref|ZP_10659741.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM49]
gi|398166195|gb|EJM54298.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM49]
Length = 289
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAVAPGI--LAEEALALDIPLIHYSTDYVFDGM 107
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y E+D P+ YGKSK+A E+ I + + ILR+S +Y + + L +Q
Sbjct: 108 KASPYNEDDTPNPLGAYGKSKLAGEQAIRDVQGKYLILRTSWVYSTHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + LAL RW + + ++ S
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTIANSTLALIERWQTNEVANWGTYHLTAQGETSWF 221
Query: 255 QMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E +G + + P+ +S P + +D ++L + + ++ +
Sbjct: 222 GFAQAIGETLRQQGRPCADLLPIPSSDYPTPAARPLNSRLDCSRLQRDWGVSQPDWQTAL 281
Query: 312 KLTLAAE 318
+ L +
Sbjct: 282 RECLTEQ 288
>gi|217966753|ref|YP_002352259.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724]
gi|217335852|gb|ACK41645.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724]
Length = 278
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 30/177 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G+LGQ+ ++ E + +DV H D++++
Sbjct: 2 KVLITGAGGFLGQYFVK-----EFQDHDVIPLTHK------------------DINIEDK 38
Query: 65 SGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + + LK PD+V++ AA+ P +CE DPD A +N + ++ + L
Sbjct: 39 NTIEKIIELK---PDLVIHPAAIRSPDICERDPDLAWKVNALGT--KHIAIACSILDIPL 93
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I++STD V+ G K S Y E D P+NVYG++K+ E F+ E C + I+R+S ++G
Sbjct: 94 IYISTDYVFSGDKNSPYTEFDTPNPINVYGRTKLQGELFVKEFCEKYFIIRTSYVFG 150
>gi|54293741|ref|YP_126156.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens]
gi|53753573|emb|CAH15028.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens]
Length = 294
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 36/311 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E H +P + +LD V
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSE---------HEVSPCTRDILDCFKLERV--------- 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L +PD+++N AA + E++PD A +N + V L ++ K LI
Sbjct: 44 ----QDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCRLVNYCSFKNIPLI 97
Query: 125 HLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 98 HLSTDYVFDGEKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L ++ S +++ D+ P RD+ +++ + + L
Sbjct: 158 NFVKTIL------NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKISHSSFDYWGLY 211
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G + + A V + L + P+ + P + +D TK+
Sbjct: 212 HYAGQGVTNWHEFANVFLNMAKEKQLLLTLTDLNPIKSEEYPTRATRPKNSVLDTTKIET 271
Query: 299 TLNIDPVTYKD 309
L I ++K+
Sbjct: 272 ILGIKSCSWKN 282
>gi|300717502|ref|YP_003742305.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661]
gi|299063338|emb|CAX60458.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661]
Length = 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 34/317 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL L+ AL + DL +
Sbjct: 2 KILLLGKNGQVGWELQRALA----------------PLGTLI--ALDRHSTTYCGDLSNA 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G A L +PDV+VN AA + E++P+ A +N S +++ E LL+
Sbjct: 44 EGIAATILAI-KPDVIVNAAAHTAVDKAESEPEVAAVLNTSSVAA--MAAAAEEVGALLV 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V+ G + + E D P++VYGK+K E+ I CSN+ I R+S +Y +
Sbjct: 101 HYSTDYVFNGQGEQPWTEADVTEPLSVYGKTKRDGEEAIAAACSNYLIFRTSWVYAAKGN 160
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ L + E++ +D+ P D++ A R + Q+ +
Sbjct: 161 NFAKTMLKLA------KDREELSVINDQFGAPTGA-DLIADCTAHAIRKAKGEPQLSGIY 213
Query: 244 NVGGPDRVSRVQMAEVVAEIR-----GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
++ + A V G + I PV+ S+ + PA+ +D K Q
Sbjct: 214 HLIASGTTTWHDYASFVITTGREKGLGLKVNKINPVATSAFPTPAKRPANSRLDTAKFQQ 273
Query: 299 TLNIDPVTYKDGVKLTL 315
+ + + DGV+ L
Sbjct: 274 SFGLTLPDWHDGVERML 290
>gi|311278964|ref|YP_003941195.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1]
gi|308748159|gb|ADO47911.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1]
Length = 293
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E + A SIN + L+ LLIH+STD V+ G
Sbjct: 52 KPDIIINAAAYTAVDKAEAESQLAYSINHIGA--KNLAEAATKVGALLIHISTDYVFPGT 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D+ PV+VYG+SK+ E I C+ + I+R++ ++G + V L +
Sbjct: 110 KEGLYTESDQTGPVSVYGRSKLDGENAIIASCAKYIIIRTAWVFGEHGHNFVKTMLRLA- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
++++ D+ P Y D+ K I+A+ +++ E+
Sbjct: 169 -----KTNKQLKVVSDQQGGPTYAGDIAKAIVAIAVKFMKEE 205
>gi|443324888|ref|ZP_21053610.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
gi|442795490|gb|ELS04855.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
Length = 297
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 47/322 (14%)
Query: 4 KRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++L++G TG +GQ LL Q L E+ +TP Q ++D
Sbjct: 2 KKILLIGSTGQVGQELLTTLQSLGEL------------TTPTRQ-------------ELD 36
Query: 61 L-KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
L K DA+A P+++VN AA + E + AM+IN + V + +
Sbjct: 37 LTKPDEIRDAIASV--SPEIIVNAAAYTAVDKAETESQLAMAINALAPEV--MGEMAQKI 92
Query: 120 ENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+H+STD V++G + YKE+D P+ VYGKSK+ E I +KC + ILR++ +Y
Sbjct: 93 SAKLVHISTDYVFDGQHCTNYKEDDITNPLGVYGKSKLTGELGIRKKCDDHIILRTAWVY 152
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + K++ + ++ ++++ D+ P + D+ I + +
Sbjct: 153 GCKGHGNFVKTML-----RLGAERDELKVVEDQIGTPTWAYDIAAAIANIIEKPTEIPSG 207
Query: 239 MQLLLNVGGPDRVSRVQMA-EVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDI 293
N G S A + E R + L + P++ + Q PA+ +
Sbjct: 208 TYHYTNTG---VASWYDFALAIFDEARQLNFPLKIKKVLPITTAEYPTPAQRPANSILST 264
Query: 294 TKLVQTLNIDPVTYKDGVKLTL 315
TK Q + + P ++D +K L
Sbjct: 265 TKFTQMVGLYPPYWRDSLKKML 286
>gi|406915076|gb|EKD54200.1| DTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 296
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+++N AA + E + D+AM +N V L+ LL+H+STD V++G +
Sbjct: 57 PDIIINTAAYTAVDDAEKNSDAAMRVNYLG--VKNLAELCRRYNILLLHISTDYVFDGKQ 114
Query: 137 -SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ Y+EED P+NVYG SK EK I + + ILR S I+ + + L
Sbjct: 115 YTLYQEEDFPNPINVYGLSKWLGEKAITDHHDRYIILRVSGIFSEYNHNFLKTILR---- 170
Query: 196 DSVLSKGEKVEF--FHDECRCPVYVRDVVKIILALTNR 231
LS+ EK+EF D+ CP Y D+ I+ +L +
Sbjct: 171 ---LSR-EKIEFNVVADQITCPTYAEDIADILFSLIKK 204
>gi|15922287|ref|NP_377956.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7]
gi|145579383|pdb|2GGS|A Chain A, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose
Reductase From Sulfolobus Tokodaii
gi|145579384|pdb|2GGS|B Chain B, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose
Reductase From Sulfolobus Tokodaii
gi|15623076|dbj|BAB67065.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7]
Length = 273
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 46/306 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ G +G LG L + LSE ++V ++S+ + + +DL
Sbjct: 2 RTLITGASGQLGIELSRLLSE----RHEVIKVYNSSEIQG-----------GYKLDLTDF 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +K +PDV++N AA++ CE + + A IN + V + + ++ ++
Sbjct: 47 PRLEDFIIK-KRPDVIINAAAMTDVDKCEIEKEKAYKINAEA--VRHIVRAGKVIDSYIV 103
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG SK+ E F + S I+R+S I+
Sbjct: 104 HISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQDDS--LIIRTSGIFR----- 156
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G+ V F P+ R + IL L + + +++
Sbjct: 157 --NKGFPI-YVYKTLKEGKTV-FAFKGYYSPISARKLASAILELL------ELRKTGIIH 206
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD--RG--VQSPADISMDITKLVQTL 300
V G +R+SR ++A + E P VD RG + P D S+D ++ + L
Sbjct: 207 VAG-ERISRFELALKIKE------KFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKIL 259
Query: 301 NIDPVT 306
+ D T
Sbjct: 260 STDFYT 265
>gi|254250399|ref|ZP_04943718.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia PC184]
gi|124879533|gb|EAY66889.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia PC184]
Length = 321
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+K VL++G +G LG+ + L+ E +A + LL P + DV
Sbjct: 10 RKTVLLIGASGLLGRAVAACLAR-ESSLTLLATIRNPQSAGAKLLALPPENIAELDV--- 65
Query: 63 SGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D +L+ +P V+ CAA P VCE DPD+A +INV + + +
Sbjct: 66 ----LDQPSLERIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPAR--IGALATR 119
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +++
Sbjct: 120 YGAWTLGISTDYVFDGKAAPYREDATPNPLNIYGRTKLEGEVALLAASPLSCVLRLPLLF 179
Query: 179 GPQTISPVPKSLPIQWIDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
GP I+ +S + +V++ + V R P + DV ++I LT R L+
Sbjct: 180 GP--IADWSESAVTSLVPAVVASSRPGADAVGMDAWAIRYPTWTPDVAQVIRDLTLRHLA 237
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS---TSLIKPVSASSVDRGVQSPADISM 291
+ + + + G + +++ +A+ +A G T + +P A+ P D +
Sbjct: 238 -GESVTGIRHWSGEEPMTKYDIAQRIAAALGIDASFTPITQPTDAT------PRPYDCHL 290
Query: 292 DITKLVQTLNIDPVTYKDGVKLTLAAEA 319
D + V+ L ID T D T+ +A
Sbjct: 291 DAAR-VRALGIDYATPFDTALRTVLRDA 317
>gi|402486234|ref|ZP_10833066.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CCGE 510]
gi|401814890|gb|EJT07220.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CCGE 510]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+V+ AA + E+D + A S+N + + +IH+STD V+ G
Sbjct: 51 RPDVIVSAAAYTAVDKAESDAELAFSVNAAGAGAVAEACARIGVP--VIHISTDYVFSGD 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y EED APV+VYG+SK+A E + N ILR++ +Y P +
Sbjct: 109 KASAYSEEDATAPVSVYGRSKLAGETAVAAANPNHVILRTAWVYSP---------FGTNF 159
Query: 195 IDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLLNVGGPDR 250
+ ++L E + D+ CP D+ ILA+ R +++ ++ ++ G
Sbjct: 160 LKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTFHLTGSGE 219
Query: 251 VSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTY 307
S A E+ A++ G T ++ + + + PA+ ++ KL +T I +
Sbjct: 220 ASWADFAEEIFAKLSKSGGRTVGVERIPTADYPTPARRPANSRLNGDKLARTYGIRLPEW 279
Query: 308 KDGVKLTL 315
K + + +
Sbjct: 280 KQSMTIVM 287
>gi|159125959|gb|EDP51075.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
fumigatus A1163]
Length = 304
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 36/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
VL+ G TG LG+ + + G+ Y A TP P +L L D+
Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRA-----TP-PTILKADLEKP-----EDI 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ D L V ++CAA P +C+ +P+ A +NV ++ L+ T ++
Sbjct: 54 KNL--LDEAKL------VPLHCAANRSPDLCDKNPEQARRVNVDATRT--LAEETSARKA 103
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LL+++STD V+ G ++ Y+ + E +P N YG+ K E + E + +LR +
Sbjct: 104 LLVYISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPL 163
Query: 177 IYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG Q S ++ I I + V+ R P DV ++ + ++L E
Sbjct: 164 LYGTAQNNSESAVNILIDAIWKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYLKE 223
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISM 291
++ L L+ DR+++ +M E +AE+ G S +I+ + + VQ P D +
Sbjct: 224 RPRIHELPKVLHFSSEDRMTKYEMCEKLAEVLGLSLAGMIRNKQGNDPNASVQRPYDTHL 283
Query: 292 DITKLVQTLNID 303
TK+++ L ID
Sbjct: 284 S-TKVLKDLGID 294
>gi|392958029|ref|ZP_10323548.1| spore coat polysaccharide synthesis [Bacillus macauensis ZFHKF-1]
gi|391876014|gb|EIT84615.1| spore coat polysaccharide synthesis [Bacillus macauensis ZFHKF-1]
Length = 283
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +PDVV++CAA + E+D A SIN + +++ + + I++STD V
Sbjct: 46 LRTYRPDVVIHCAAYTRVEQAESDAHQAYSINGLGAY--YVAKACQEVQAQFIYISTDYV 103
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G K Y+ D + P+NVYG SK E+ C+ ++R+S +YG K+
Sbjct: 104 FDGQKRTPYETSDRVRPLNVYGMSKWLGEELALAACARAKVVRTSWLYGH------GKAN 157
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
+ + + + E+V ++ P Y D+V ++AL + + + N G
Sbjct: 158 FVNTMRASAIREEEVAVICEQWGSPTYAPDLVHAVMAL----IPCESGVYHFSNEG---M 210
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
S A + + G + L++P ++ Q P+ + TK T +P +++
Sbjct: 211 CSWYDFAREIYRLSGAHSHLVQPKKMANYHSEAQRPSYSVLAKTKFQATTGCEPRGWQEA 270
Query: 311 VKLTLAAE 318
++ E
Sbjct: 271 LQAFFKKE 278
>gi|420242839|ref|ZP_14746830.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF080]
gi|398065237|gb|EJL56886.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF080]
Length = 309
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 19/242 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHL 126
A ++ +PD++V+ AA + + E D +A+SIN P L ++ ++HL
Sbjct: 50 AATVQAARPDLIVSAAAFTGVDLAETDAATAISINATGPGELARVAATL----RVPIVHL 105
Query: 127 STDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STD V++G K S Y E D +AP+ VYG+SK+ E+ + ++AILR++ IY SP
Sbjct: 106 STDYVFDGSKPSPYGESDPVAPLGVYGRSKLMGEQNVAAATEDYAILRTAWIY-----SP 160
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-SEDKQMQLLLN 244
++ + S +K E+V D+ P D+ I+A+ L S D ++ + +
Sbjct: 161 FSRNFLRTMLKSAETK-EEVRIVDDQIGNPTSAIDIAGAIIAVGQNLLASNDPALRGIFH 219
Query: 245 VGGPDRVSRVQMAEVVAEIR----GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ G S A+ + +I G S +I+ + S + PA+ +D ++L Q
Sbjct: 220 MAGTGAASWADFADEIFKISAANGGPSAQVIR-IPTSDYPTPARRPANSQLDCSRLHQRH 278
Query: 301 NI 302
I
Sbjct: 279 GI 280
>gi|389686276|ref|ZP_10177597.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis O6]
gi|388549737|gb|EIM13009.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis O6]
Length = 289
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 18/251 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++P+ A +IN + V F E L LIH STD V+
Sbjct: 50 RPQLIINAAAHTAVDQAESEPELAFAINASAPGV-----FAEEARKLGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K Y E+DE P++VYG+SK+A E+ I S ILR+S +Y S K+
Sbjct: 105 DGSKQAPYTEDDEPNPLSVYGQSKLAGERAIDAAGSEHLILRTSWVY-----SNTGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + + D+ P + + AL RW + ++ +
Sbjct: 160 LT-MQRLLQEKPHLRVVADQIGAPTWASTIAASTAALIERWQAGKPGAWGTYHLTAAGKT 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E +G + + ++ + +S+ P + +D +L + + ++
Sbjct: 219 SWFGFAQAIGEHLLAQGKACATLEAIPSSAYPTPAPRPLNSRLDCGRLAREWGVTQPEWR 278
Query: 309 DGVKLTLAAEA 319
+ LA +
Sbjct: 279 SALHECLAGQG 289
>gi|383762265|ref|YP_005441247.1| dTDP-4-dehydrorhamnose reductase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382533|dbj|BAL99349.1| dTDP-4-dehydrorhamnose reductase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 20/240 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDVV+N AA + E++PD+A ++N +L+ E L+H+ST++V+ G
Sbjct: 63 PDVVINAAAWTNVDAAESNPDAAYAVNALGP--KYLAEGCEQCGAALVHVSTNEVFAGQP 120
Query: 137 S-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
FY+E D +VY +SK+A E+ + C F I+R + ++GP + P + I
Sbjct: 121 GRFYREYDACEASSVYARSKLAGERAVMALCRRFYIVRVAWLFGPGG-----ANFPSKII 175
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQLLLNVGGPDRVSR 253
+ +G + DE P Y D I+ L TNR+ + L+N G SR
Sbjct: 176 AAADQRG-ALRVVADEFGNPTYAPDAALAIVRLIRTNRF-----GVYHLVNEGW---CSR 226
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 313
+ A V G + P+S + R Q P + + + L I +++ V++
Sbjct: 227 YEFACHVLTSSGRGHIPVTPISHTEWQRPAQPPLHAVL-VNQAAAALGIQLRPWQEAVEV 285
>gi|390951923|ref|YP_006415682.1| dTDP-4-dehydrorhamnose reductase [Thiocystis violascens DSM 198]
gi|390428492|gb|AFL75557.1| dTDP-4-dehydrorhamnose reductase [Thiocystis violascens DSM 198]
Length = 303
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 39/308 (12%)
Query: 3 KKRVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFD 58
+ R+L++G G +G L L GL E+ +AA+ P + L+DA + + D
Sbjct: 10 RPRLLLIGANGQVGWELCRTLAGLGEV------IAASIEGDHGPVIDLMDAASLARLVHD 63
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+PD VVN AA + E D ++A IN + V L +
Sbjct: 64 T----------------KPDAVVNAAAYTAVDKAEIDRETAQRINADA--VGELGALLAA 105
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH STD V+ G + Y E+D P+NVYG++K+ E+ + E + I R+S +
Sbjct: 106 RGVPIIHYSTDFVFSGTLDRPYTEDDVPDPLNVYGETKLGGERALLESGAKSLIFRTSWV 165
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED- 236
YG + + + L + + +++ D+ P + R + ++ + R L +
Sbjct: 166 YGARGANFLLTML------RLFRERDELRVVDDQIGSPTWSRMLAEMTALVLYRVLRGEL 219
Query: 237 --KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
Q+ L N+ G +VS A + E G ++LI P+ S + P +D +
Sbjct: 220 DLNQVGGLYNLTGSGQVSWYGFANAILESSGLDSNLI-PIPTSEYPAPAKRPMYSVLDNS 278
Query: 295 KLVQTLNI 302
+ +T +
Sbjct: 279 RFRKTFGL 286
>gi|260893428|ref|YP_003239525.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4]
gi|260865569|gb|ACX52675.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4]
Length = 278
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 45/316 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G LG+ +++ E+E + +DV L + LD V
Sbjct: 2 RVLVTGAAGRLGRAMVK---ELEERGFDVIG------LARQQLDITSRKAV--------- 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A L+ +P VVVNCAA + E DP A +N V +L+S E L+
Sbjct: 44 ----AEVLREYRPRVVVNCAAYTDVDGAEEDPRRAFLVN--GLAVKYLASLCAASEAKLV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K Y D P+N YG+SK E I E+ ++ I+R S ++G
Sbjct: 98 HISTDYVFDGEKGEPYHVYDPPRPINRYGESKYWGEAAIREEGGDYLIVRISWLFGTGR- 156
Query: 184 SPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ +L E +++ D+ P Y D + A+T+ L+ +
Sbjct: 157 ---------NFVSMILRLAETEGEIKVVEDQYGSPTYTPDAAR---AITDLILAGARGTF 204
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+ N G S ++A + G ++I P + R + P +D L + L
Sbjct: 205 HVTNAGT---ASWYELACSAVRLAGIKANVI-PCRSEDFPRPARRPRYTVLDPFPLKEYL 260
Query: 301 NIDPVTYKDGVKLTLA 316
+++D ++ LA
Sbjct: 261 GYSLPSWEDALERYLA 276
>gi|398308754|ref|ZP_10512228.1| dTDP-4-dehydrorhamnose reductase [Bacillus mojavensis RO-H-1]
Length = 283
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 50/314 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G +G LG L + L + Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGASGQLGLELCRRLKQ---AGYEVIA------LTKQMMNIADQRSVRHSFGHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD+VVN AA + CE + D A IN + L S
Sbjct: 52 ----------------QPDIVVNTAAFTSVDKCETELDKAYLINGIGAYYTALESSRIGA 95
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +H+STD V++G + Y+E+D + P +YGKSK E+ I ++ I+R+S +Y
Sbjct: 96 Q--YVHISTDYVFDGKGTQPYREDDHLDPNTIYGKSKKLGEELIQLARTDSTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + V L + +++ +D+ P Y +D+ + ++ L S
Sbjct: 154 GQSGSNFVHTMLKLA------ETKQELRVVNDQIGSPTYTKDLAEAVIKL----FSHPPG 203
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + N G S + A+ + E G +T+ I PV+ PA S+ + ++
Sbjct: 204 IYHVSNSG---ICSWYEFAKAIMEESGLNTT-ITPVTTEEYGNSTPRPA-YSVLSHRAIE 258
Query: 299 TLNIDPVTYKDGVK 312
I P ++D ++
Sbjct: 259 EAGIRPRHWRDALR 272
>gi|107028498|ref|YP_625593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054]
gi|116686494|ref|YP_839741.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424]
gi|105897662|gb|ABF80620.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054]
gi|116652209|gb|ABK12848.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424]
Length = 321
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 146/321 (45%), Gaps = 17/321 (5%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+ VL++G +G LG+ + L+ E +A + LL P + ++DL
Sbjct: 10 RSTVLLIGASGLLGRAVAACLAR-ESSLTLLATIRNPQSAGAKLLALPPENIA--ELDLL 66
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + +P V+ CAA P VCE DPD+A +INV + + +
Sbjct: 67 DQPSLERI-FETHRPAAVILCAAERRPDVCERDPDAARAINV--TAPARIGALATRYGAW 123
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +++GP
Sbjct: 124 TLGISTDYVFDGKAAPYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGP-- 181
Query: 183 ISPVPKSLPIQWIDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
I+ +S + +V++ + V R P Y DV ++I LT R L+ +
Sbjct: 182 IADWSESAVTSLVPAVVASSRPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLA-GES 240
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + + + +++ +A+ +A G SL P++ + P D +D + V+
Sbjct: 241 VTGIRHWSSEEPMTKYDIAQRIAAALGIDASL-TPITQPT--DATPRPYDCHLDAAR-VR 296
Query: 299 TLNIDPVTYKDGVKLTLAAEA 319
L ID T D T+ +A
Sbjct: 297 ALGIDYATPFDTALRTVLRDA 317
>gi|417110006|ref|ZP_11963497.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512]
gi|327188679|gb|EGE55882.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSALRPDVIVSAAAYTGVDKAESEAELAFSVNAAGAGAIAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ ++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTF 212
Query: 244 NVGGPDRVSRVQMAEVV 260
++ G S AE +
Sbjct: 213 HLTGSGEASWADFAEAI 229
>gi|308175508|ref|YP_003922213.1| spore coat polysaccharide synthesis protei SpsK [Bacillus
amyloliquefaciens DSM 7]
gi|384166302|ref|YP_005547681.1| spore coat polysaccharide synthesis protein SpsK [Bacillus
amyloliquefaciens LL3]
gi|307608372|emb|CBI44743.1| spore coat polysaccharide synthesis protei SpsK [Bacillus
amyloliquefaciens DSM 7]
gi|328913857|gb|AEB65453.1| spore coat polysaccharide synthesis protein SpsK [Bacillus
amyloliquefaciens LL3]
Length = 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRRLKQ-EG--YEVIA------LTKAMMNISDQQSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYTSLEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + D+ A P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GARFIHISTDYVFSGKGTRPSHTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGNNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|428211038|ref|YP_007084182.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
gi|427999419|gb|AFY80262.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
Length = 289
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P VVVNCAA + E +P+ AM+IN + V L++ LIH+STD V++G
Sbjct: 51 KPQVVVNCAAYTAVDKAETEPELAMAIN--GTGVGILAAECHQLGARLIHVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I + + ILR++ +YG K++
Sbjct: 109 QSHPYGETDTTHPLGQYGASKLAGEEAIRQVGGDAIILRTAWVYGTGGSGNFVKTML--- 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ S+ E++ D+ P + D+ I ++ + V +
Sbjct: 166 --RLGSQREELGVVTDQVGSPTWTGDLAAAIASMIQLAIPSGTYHYTNSGVASWYDFAIA 223
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLT 314
E A +KP+S + PA + + K+ TL P ++ G++
Sbjct: 224 IFEEAQALNFPLQIQRVKPISTEEYPTPARRPAYSVLSLAKIAATLGTYPPHWRQGLRQM 283
Query: 315 L 315
L
Sbjct: 284 L 284
>gi|397685953|ref|YP_006523272.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
gi|395807509|gb|AFN76914.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
Length = 268
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 14/257 (5%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ QP +++N AA + E + A ++N V +L+ L+H+ST
Sbjct: 11 ARAVRQLQPGLIINAAAYTHVDNAETHAEQAYAVNRDG--VGYLAEAAREAGIPLLHIST 68
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G + Y+E D ++P VYG SK A E+ + + ILR+S ++G + V
Sbjct: 69 DYVFSGAANAPYRETDSVSPTGVYGASKQAGEEAVRSRLEQHLILRTSWVFGAHGHNFVK 128
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L + LS +D+ CP Y + +++LAL R ++ L + GG
Sbjct: 129 TMLRLARQRDALS------VVNDQVGCPTYAGSIAEVLLALAARHARREELAWGLYHFGG 182
Query: 248 PDRVSRVQMAEVV---AEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S A + AE G + + P+ ++ PA +D + +T +
Sbjct: 183 QPACSWYDFAVEIFRQAEAGGLLSRRPQVTPICSAQYPTPASRPAWSVLDCRRFEETFGL 242
Query: 303 DPVTYKDGVKLTLAAEA 319
+ + LAA A
Sbjct: 243 AAPDWHRDLASVLAALA 259
>gi|418936363|ref|ZP_13490086.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. PDO1-076]
gi|375056930|gb|EHS53131.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. PDO1-076]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 25/251 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL-LIHLSTDQVY 132
+PD +V+ AA + E++ A ++N P+++ N+ + ++HLSTD V+
Sbjct: 55 KPDAIVSAAAYTAVDKAESEEALAFAVNAHGPTTVAE-----VANELGIPIVHLSTDYVF 109
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
G K FY E DE PV+ YG+SK+A E + N AILR++ +Y P
Sbjct: 110 TGDKDGFYNEADETGPVSAYGRSKLAGELGVAAANPNHAILRTAWVYSP---------FG 160
Query: 192 IQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGG 247
++ ++L E V D+ P D+ ++++ R ++ D +++ + ++ G
Sbjct: 161 ANFMKTMLRLAETRDSVNVVADQFGTPTSALDIADAVISVARRLSTDLDPKLRGVFHLTG 220
Query: 248 PDRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ AE++ R I ++A+ + PA+ + KL QT I
Sbjct: 221 GGEATWADFAEMIFSGLHARSGKHVSIGRITAADYPTPAKRPANSRLSNEKLKQTYGITA 280
Query: 305 VTYKDGVKLTL 315
+K+ K+ L
Sbjct: 281 PDWKESAKVVL 291
>gi|418737889|ref|ZP_13294285.1| RmlD substrate binding domain protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410746063|gb|EKQ98970.1| RmlD substrate binding domain protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 283
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 43/315 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+VGG +G L K Y V + S LD DL S
Sbjct: 2 KRILIVGGKSSIGA----ALESFFCKDYFVVCSSRSKEEKYYYLDLAE--------DLDS 49
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKEN 121
+ D V CA +S ++C+ +P A +NV + L+ L F
Sbjct: 50 WEILENF-------DYVFFCAGISSVKICKENPILAYKVNVEHTVTLIKKLIKFGSK--- 99
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+I ST V+ G+ KE+D I+P+ YG+ K EK I N +I+R + +
Sbjct: 100 -IIFFSTSLVFNGLHPNPKEKDIISPICEYGRLKSETEKKIVNFSDNVSIVRVTKV---- 154
Query: 182 TISPVPKSLPI--QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ K +P+ +W S EK+ F + P+ + ++ + L W S
Sbjct: 155 ----IHKEMPLFDKW-KHHFSFNEKISAFDNYSISPISIEYLIYAMKHLLENWTSG---- 205
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISMDITKLVQ 298
+L++ D ++ ++A+ +A+ G+ SL+ P +A + D + P S+D+
Sbjct: 206 --ILHLSSSDEITYFEIAKSIAKYSGFKESLVVPQTAKADDIFMDYVPMHASLDMNYTAS 263
Query: 299 TLNIDPVTYKDGVKL 313
LNI ++ D +
Sbjct: 264 ALNITRPSFYDALSF 278
>gi|194334529|ref|YP_002016389.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM
271]
gi|194312347|gb|ACF46742.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM
271]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
DV++NCAA + E+D D+AM +N V L+ + LL+ +STD V+ G S
Sbjct: 54 DVIINCAAYTAVDRAEDDADTAMRVNRDGPGV--LAECARERGALLLQVSTDYVFNGESS 111
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+E DE++P+ VYG+SK E+ + +++ I R+S +Y + V L +
Sbjct: 112 VPYRECDEVSPLGVYGQSKWEGEELVRRSGASYMIFRTSWLYSAHGNNFVKTMLRLG--- 168
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +++ D+ P Y D+ + ++ + R
Sbjct: 169 ---AERDELRVVFDQVGTPCYAADLARALMHVLER 200
>gi|288942438|ref|YP_003444678.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180]
gi|288897810|gb|ADC63646.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 3 KKRVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFD 58
+ ++L++G G +G L L G+ E+ +AA+ P + L+DA + + D
Sbjct: 10 RPKLLLIGANGQVGWELRRTLAGVGEV------IAASLEGEYGPTIDLMDAKALARLIED 63
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+PD ++N AA + E+D +A +N + V + +
Sbjct: 64 ----------------SRPDALINAAAYTAVDKAESDRATAQRLNADA--VGEMGALLAE 105
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH STD V+ G + Y E+D P+NVYG++K+ E+ + + + I R+S +
Sbjct: 106 RGTPIIHYSTDFVFSGSLGRTYTEDDSPDPLNVYGETKLGGERALLDSGARALIFRTSWV 165
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED- 236
YG + + + + + + E++ D+ P + R + +I + +R L D
Sbjct: 166 YGARGANFLLT------MRRLFQEREELRVVDDQIGSPTWSRMLAEITAQVLHRVLRGDL 219
Query: 237 --KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
++ L ++ G +VS A + E G T+LI P+ +S + P +D
Sbjct: 220 DLDKVGGLYHLTGSGQVSWYGFASAILEASGAQTNLI-PIPSSEYQAPAKRPTFSVLDNG 278
Query: 295 KLVQTLNI 302
+ +T +
Sbjct: 279 RFQETFGL 286
>gi|374992201|ref|YP_004967696.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces
bingchenggensis BCW-1]
gi|297162853|gb|ADI12565.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces
bingchenggensis BCW-1]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 56/316 (17%)
Query: 7 LVVGGTGYLGQHLLQGLSE-------IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
LV G G LGQ ++ GL E + K D+ H + DAL
Sbjct: 6 LVTGSGGLLGQDVMTGLREAGETAKGFDHKGLDITDAH-------AVRDALAKH------ 52
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTE 117
+P +V+NCAA + P E D + A+ IN + L + + F
Sbjct: 53 ----------------RPAIVINCAAFAAPDKAETDEEGALRINGEGTRNLADACAEFQA 96
Query: 118 NKENLLIHLSTDQVYEGVKSF-----YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-I 171
+ LIH+STD V+ G S + E+ PVN YG++KVA E+ ++ +
Sbjct: 97 H----LIHISTDYVFSGDDSGGAAVPFAEDAPTCPVNAYGRTKVAGERAVFACLPRTGYV 152
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R++ ++G + V + ++ + + V+ D+C P + D +L L
Sbjct: 153 FRTAWLFGAGRANFVRTMIRLE------REKDHVDVVADQCGQPTWTMDAAGQLLRLGRA 206
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
L G + S ++A+ V + G ++P + ++ R PA +
Sbjct: 207 ALGGQAPAGAYHGSAG-GQASWYELAQEVFRLLGADPQRVRPSTGAAFGRPAPRPAYSVL 265
Query: 292 DITKLVQTLNIDPVTY 307
+ T+ I+P+ +
Sbjct: 266 GHARW-HTVGIEPIRH 280
>gi|423410996|ref|ZP_17388116.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3O-2]
gi|423433219|ref|ZP_17410223.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4O-1]
gi|401109171|gb|EJQ17098.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3O-2]
gi|401112701|gb|EJQ20577.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4O-1]
Length = 279
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD++++ AA + E+D +SA +N + +L+ E ++STD V++G
Sbjct: 51 QPDIIIHTAAYTQVDQAESDEESAFKVNAEGT--KYLAQAAEAVGAKFCYVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K YK +D+ P VYGKSK+ E++ E CS I+R+S ++G + V L +
Sbjct: 109 KDTPYKPDDQTNPQTVYGKSKLVGEQYTQEYCSKSYIVRTSWVFGLYGNNFVKTMLRL-- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ +++ HD+ P Y D+ + I++L
Sbjct: 167 ----AEENKELGIVHDQVGSPTYTTDLARFIISL 196
>gi|298290102|ref|YP_003692041.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506]
gi|296926613|gb|ADH87422.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 47 LDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV-- 104
L AL H+ +D+ S A AL+ +P VV+N AA + E++P+ A IN
Sbjct: 28 LTALDHA----GLDITDASALKA-ALEQYRPQVVINAAAYTAVDKAESEPEKANLINAVA 82
Query: 105 PSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIY 163
P + +S LIH+STD V++G K+ Y E D +AP+ VYG SK A E+ +
Sbjct: 83 PGLIAQACASHGAG----LIHISTDYVFDGTKAGAYVESDPVAPLGVYGASKEAGERAVR 138
Query: 164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ I+R+S +YG + + L + +++ D+ CP RD+ +
Sbjct: 139 DSLDRHLIVRTSWVYGVHGANFLKTMLRLA------ETRDRLTVVADQTGCPTATRDIAE 192
Query: 224 IILALTNRWLSED 236
+L + + D
Sbjct: 193 GLLTAAMQLATAD 205
>gi|296137703|ref|YP_003644947.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
gi|295981872|emb|CBH22830.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 33/304 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L++G TG +G L + L+ PL ++ H+ VDL +
Sbjct: 8 ILLLGATGQVGHALRRTLA----------------PLGRV------HTPGRAAVDLTDLT 45
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + G PD+VVN AA + E +P+ A IN + V L+ L+H
Sbjct: 46 SVRAAVQELG-PDLVVNAAAYTDVDGAEEEPERASRINAEAPRV--LAEAARAVGAWLVH 102
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G K Y E D P+NVY ++K E I ILR+S +Y +
Sbjct: 103 YSTDYVFDGTKRAPYTEADAPNPINVYSRTKRDGEAAIQAVGGRHLILRTSWMYSRR--- 159
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
+S ++ + + + +++ D+ P + + ++ R L+E D + L
Sbjct: 160 ---RSNFVRTMLGLADENDRLTVVDDQIGVPTWAGWCAEATASICERLLAEDDAALSGLY 216
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
++ G + S +A G + + I+PVS+ + PA +D +++ ++
Sbjct: 217 HLAGTGQTSWYGLARAALAQFGRTDTAIEPVSSGEYETAAPRPAYTVLDSSRVRAAFDLP 276
Query: 304 PVTY 307
V +
Sbjct: 277 AVPW 280
>gi|15615927|ref|NP_244231.1| spore coat polysaccharide synthesis dTDP-4-dehydrorhamnose
reductase [Bacillus halodurans C-125]
gi|10175988|dbj|BAB07084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose
reductase) [Bacillus halodurans C-125]
Length = 283
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD +++ AA + CE++ A +N + ++ V + T K LI++STD V++G
Sbjct: 52 PDWIIHVAAFTAVDQCEDEQRKAYHVNGLGAANVARAARETGAK---LIYISTDYVFDGN 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y+ D P+NVYG SK E+ + + I R+S +YG + V L
Sbjct: 109 KNSPYETCDLPNPLNVYGNSKWLGERLVQKYVKTCTIARTSWLYGHYGGNFVKTML---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L KGE +E D+ CP YV D+V + AL ++ + ++ +
Sbjct: 165 --RLLRKGEPIEVVADQVGCPTYVNDLVYYLFALM-------EKPSGIYHISNRGSCNWF 215
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ A +A+ GY SLI+ + + + P
Sbjct: 216 EFARAIAKNAGYDPSLIRATTTKAFAAKARRP 247
>gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
gi|256584548|gb|ACU95681.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 21/282 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GG G LG+ L+ + + G DV A P L P + V DL +G
Sbjct: 14 VLVPGGRGQLGRDLVAAAAAL-GDRIDVIA-----PGSAELDVTEPGAVVEAVTDLATG- 66
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + G+ VV+N AA + E D +A S+N + L++ ++ L+H
Sbjct: 67 -----AAQSGRRAVVINAAAYTAVDAAEEDEGTAFSVNADGPRM--LAAVCSSRGVPLVH 119
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V+ G Y+ ED + P + YG++K A E + + ++R++ +YG +
Sbjct: 120 VSTDYVFSGTADRPYEPEDALGPRSAYGRTKAAGENAVLGSGARAWVVRTAWLYGAGGNN 179
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V + ++ S+ + V D+C P D+ + +L L +R S + +L+
Sbjct: 180 FVRTMMELE------SRRDTVSVVDDQCGSPTSSADLARGLLELADRITSGRGPRRKVLH 233
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ + +A V E G ++P S R P
Sbjct: 234 CTNSGQTTWFGLARAVFEELGADPGRVRPCSTEDFPRPAPRP 275
>gi|365968161|ref|YP_004949723.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416075046|ref|ZP_11584875.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|416081629|ref|ZP_11586480.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|444338249|ref|ZP_21152111.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444347656|ref|ZP_21155494.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|1944161|dbj|BAA19635.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans]
gi|348006473|gb|EGY46890.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348011002|gb|EGY50998.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|365747074|gb|AEW77979.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443545451|gb|ELT55252.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|443548404|gb|ELT57663.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 292
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 137/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGYCLTQ---QLQGK-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 NAVKKTVENF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAETAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D + P +YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDAVDPQGIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ + +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGESVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ + + + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKAPLVNAIITADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 272 AFGIQPSDWQRALK 285
>gi|353235285|emb|CCA67300.1| related to vacuolar protein sorting-associated protein VPS5
[Piriformospora indica DSM 11827]
Length = 307
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 28/294 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G +G LG + G +DV H+ L + VDL
Sbjct: 4 RVLVTGASGVLGSAVFNAFKHSGG--FDVTGIAHTRATDGLQV-----------VDLLKR 50
Query: 65 SGFDAVALK--FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + G+ D ++CAA P + E +P+ +N S + L+ + +
Sbjct: 51 DSMETFIKQTDLGEGDWCIHCAAERRPDLAEKNPEQTQQLN--SFVPGLLARLSAERGFK 108
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQ 181
L+++STD V++G Y +D P+ +YGK+K E + K S +LR I+YGP
Sbjct: 109 LVYISTDYVFDGTSPPYSPKDRTNPLQLYGKTKRDGELAVLGIKDSKHVVLRVPILYGP- 167
Query: 182 TISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+P I + V++ G++ H R P V D+ ++ LT + + +
Sbjct: 168 --APKNGDSAINILLDVVADQSGKRYTMDHFATRYPTNVLDIANFLVRLT----ALHRPL 221
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+L+ + ++ ++ + +++ G I P S + D G P + +D+
Sbjct: 222 PTILHYSAGEPFTKYEICLIFSQLLGLPHDHIVPQSTAPND-GTPRPVNTQLDV 274
>gi|431793469|ref|YP_007220374.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783695|gb|AGA68978.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
LK QPD+V N AA + CE+ PD A +N + L+ L+H+STD V
Sbjct: 47 LKALQPDLVFNAAAYTNVDECESKPDLAYQVNCLG--IRNLAIIANELNAALVHISTDYV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G + Y+E D + P +VYGKSK+ E + + C I+R++ ++G + V L
Sbjct: 105 FGGQGNKPYREYDPVNPRSVYGKSKLDGELMVRQHCRRHYIVRTAWLFGYYGNNFVRTML 164
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
+ + E + +D+ P Y RD+ K I L DK ++
Sbjct: 165 RLA------KEQEYLRVVNDQRGSPTYTRDLAKAIADLV------DKPTYGTYHLTNSGN 212
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ + + E+ G + ++P++ + R + P+ +D
Sbjct: 213 CTWYTYTQEIMELAGMNNVKVEPITTQQLSRPAERPSYSVLD 254
>gi|402222309|gb|EJU02376.1| NADP-binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 309
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+++ G +G LG + S Y + HS+P + +DL
Sbjct: 3 RIIITGASGVLGSAVYAAFSSH----YTLLGLSHSSP-----------DTRYTPIDLLDP 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V +F PD V++CAA P V + D + A +N + + +L+ ++ LI
Sbjct: 48 VQVQKVWNEF-NPDWVIHCAAERRPDVADKDSEKAQRLN--AGVPAFLARLAAQMDHSLI 104
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNFAILRSSIIYGPQT 182
++STD V+ G Y P+N+YG++K+A E + +E CS+ +R ++YGP
Sbjct: 105 YISTDYVFPGTSPPYLPSSTPDPLNLYGRTKLAGEHALLSFENCSS---VRVPVLYGPVK 161
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
S + I ++ V+ ++ D + R P V DV + L + K +
Sbjct: 162 KS---EDSAINVLEKVVRDQSGKQYKMDDWQVRYPTNVLDVATFLRKL----VELGKPLP 214
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVS---ASSVDRGVQSPADISMDITKLV 297
+++ P + S+ + +++ + I P + AS+ V+ P D +D+ +
Sbjct: 215 KIIHFSAPHKHSKYTLCLAFSQLLSLPCAHITPDTPDPASTGQESVKRPKDCRLDMRETE 274
Query: 298 QTLNIDPVTYKDGVKL 313
+ L + DGV++
Sbjct: 275 ELLGVGEGEAWDGVEV 290
>gi|268316693|ref|YP_003290412.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252]
gi|262334227|gb|ACY48024.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 31/329 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +RVL+ GG G++G+ ++ E + Y VA + T L A F++ D
Sbjct: 1 MAIRRVLITGGAGFIGRWVVARCLE---QGYQVAVYDNLTAGSVDHLLAFSDRIDFYEAD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + AV + +P++V + AAL C P + +NV + N L +
Sbjct: 58 ILDTATLQAV-MDETRPEIVFHLAALHFIPYCNAHPQETLRVNVEGTY-NVLDAAARGGV 115
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNFAILRSSII- 177
+ S+ +Y V+ E APV+VYG SK E+ + + + A + + +
Sbjct: 116 RTAVVASSGAIYPSVEGLIPETLAPAPVDVYGLSKWLTEQVAEQFARTTEMACVAARLFN 175
Query: 178 -YGPQTISP--VPKSLPIQWIDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILALTNRW 232
YGP +P +P I + L +G VE H + R +YV DV ++++AL R
Sbjct: 176 TYGPYETNPHLIPH------IIASLQQGPAVELGNIHTK-RDYIYVEDVARLLVALGERV 228
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-IKPVSASSVDRGVQSPADISM 291
+ ++NVG S ++ E ++E+ G + I P VD+ Q
Sbjct: 229 TKGYE----VVNVGTGREYSAQEIIETLSELMGQPIEIRIDPARVRPVDKLHQ-----RA 279
Query: 292 DITKLVQTLNIDP-VTYKDGVKLTLAAEA 319
D T+L Q + P VT ++G+ L E
Sbjct: 280 DTTRLQQLTGMLPEVTLREGLARLLQHEG 308
>gi|126178138|ref|YP_001046103.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1]
gi|125860932|gb|ABN56121.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1]
Length = 270
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+VVN AA + CE++ D A ++N + +++S + L+H STD V++G K
Sbjct: 52 PDLVVNAAAYTDVDGCEDNRDLAFAVN--GEALAYIASACSDAGATLVHYSTDYVFDGSK 109
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y E D AP+NVYG SK+ E+ I + ++ I+R+S ++G + V L +
Sbjct: 110 REYIESDTPAPINVYGASKLLGEQNIVKNTGDYRIIRTSWLFGRHGKNFVETMLHLS--- 166
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ ++V +D+ P Y D+ +
Sbjct: 167 ---KQMDQVRVVNDQVGKPTYTVDLAR 190
>gi|167945178|ref|ZP_02532252.1| putative dTDP-4-keto-L-rhamnose reductase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 239
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + V + + + A++ + + V L+ + L++H STD V++G
Sbjct: 25 KPDLIVNAAAYTA--VDKAEAEEALATTINGTAVGVLAEQARKRNALMVHYSTDYVFDGT 82
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K + Y EEDE P+N YG+SK+A E+ + E + I R++ +Y + + + L
Sbjct: 83 KPTPYTEEDEPNPINAYGRSKLAGEQAVAEVGGEYLIFRTTWVYAARGHNFIKTIL---- 138
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + ++++ D+ P + R++ RW+ +Q + L
Sbjct: 139 --RLAGERDELKIIDDQHGAPTWARNIADATALALARWMLLKEQGREL 184
>gi|320334071|ref|YP_004170782.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM
21211]
gi|319755360|gb|ADV67117.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM
21211]
Length = 723
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 119/288 (41%), Gaps = 37/288 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+S R+L+ G TG LGQ + + I G PY + L + LD + + +D
Sbjct: 435 VSGPRLLITGATGTLGQAFARACA-IRGLPYHL--------LDRRALDITDEASIHAALD 485
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L QP V+N A E DP + L L+ +
Sbjct: 486 LH-------------QPWAVINTAGYVRVDDAETDPRNTRENTHGPHL---LALACAQRG 529
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+ S+D V++G K Y E D + P+N YG+SK AE+ + + + ++R+S +G
Sbjct: 530 VPLMTFSSDLVFDGTKGAPYVESDAVNPLNAYGRSKADAERLVLQAAPDALVIRTSAFFG 589
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P P + ++ L G V D+ P YV D+ L L + ++ +
Sbjct: 590 PWD----PYNF-AAYVVRELQAGRTVRAAGDQVVSPTYVPDLTCAALDLL---IDGERGI 641
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
L N G +S A VA + G S L++ VS + + + PA
Sbjct: 642 WHLANAGA---LSWADFARRVARVGGLSERLVEAVSTADLHQKAARPA 686
>gi|365886211|ref|ZP_09425164.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. STM
3809]
gi|365338302|emb|CCD97695.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. STM
3809]
Length = 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 28/249 (11%)
Query: 68 DAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DAV AL+ +PD V+N AA + V + +SA++ +V ++ + E IH
Sbjct: 45 DAVLAALRDFRPDFVINPAAYTA--VDRAEEESAVAYHVNRDGAKAVAEASACMEIPTIH 102
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G KS Y E+D AP++VYG SK+A E + ILR++ +Y P
Sbjct: 103 LSTDYVFDGTKSTPYAEDDATAPMSVYGASKLAGEHAVAAANHRHVILRTAWVYSP---- 158
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR-----WLSED 236
++ ++L E + D+ P Y D+ + ILA+ R W +E
Sbjct: 159 -----FGHNFVRTMLRLAETRDTLRVVCDQVGSPTYALDLAQAILAIAGRIDRSGWSTE- 212
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+ ++ GPD V+ A + A R ++ ++P++ S + P + +
Sbjct: 213 --FGGVTHIAGPDVVTWYDFACQIMRLAAARCARSANVEPITTSDYPTPARRPRNSRLSC 270
Query: 294 TKLVQTLNI 302
+L I
Sbjct: 271 NRLTTVFGI 279
>gi|281420693|ref|ZP_06251692.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205]
gi|281405466|gb|EFB36146.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205]
Length = 290
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 43/319 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV----D 60
+LV G G LG + Q+ H FVF DV +
Sbjct: 2 NILVTGANGQLGHEM------------------------QICAQKSNHKFVFTDVAEGYE 37
Query: 61 LKSGSGFDAVALKFGQPD--VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ DA+ K + D V+VNCAA + E D D A +N ++ L+ +
Sbjct: 38 KLDITNLDAIREKVSENDIQVIVNCAAYTNVDKAETDYDLANLLN--NTAAGNLAQAMKE 95
Query: 119 KENLLIHLSTDQVYEGVKSFYKEED-EIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ LIH+STD V++G K+ ED E P+ VYGK+K+A EK I I+R++ +
Sbjct: 96 VDGTLIHVSTDYVFQGDKNIPCREDWETNPLGVYGKTKLAGEKSIEATGCKHIIIRTAWL 155
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y S K+ ++ + S+ + + ++ D+ P Y D+ +I + +
Sbjct: 156 Y-----SQWGKNF-VKTMQSLTASHDTLKVVFDQVGTPTYAGDLAAVISHIIETDQLDKT 209
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ N G S A+++ E+ G +T I+P + V+ P +D +KL
Sbjct: 210 GIYHFSNEG---ICSWFDFAKIICELSG-NTCDIQPCYSEEFPSPVKRPHFSVLDKSKLK 265
Query: 298 QTLNIDPVTYKDGVKLTLA 316
QT + D +K +A
Sbjct: 266 QTFGFKVPYWTDSLKKCIA 284
>gi|435855025|ref|YP_007316344.1| dTDP-4-dehydrorhamnose reductase [Halobacteroides halobius DSM
5150]
gi|433671436|gb|AGB42251.1| dTDP-4-dehydrorhamnose reductase [Halobacteroides halobius DSM
5150]
Length = 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 43/311 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD-LKS 63
+VL+ GG G LG L L++ YD+ A +D+D L
Sbjct: 2 KVLITGGQGQLGTRLNSLLAD----KYDIYA---------------------WDIDELDI 36
Query: 64 GSGFDAVALKFG-QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
G + + PDVV++ AA + CE + D A +N + ++ + +
Sbjct: 37 TEGEETIEKVVNLNPDVVIHSAAYTDVDGCEENIDLAYQVNAYGTRN--IAVACQKCDAK 94
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++++STD V++G K Y E D+ P++VYGKSK+A EKF+ + + + I+R++ +YG
Sbjct: 95 MVYISTDFVFDGKKDEHYIEFDQTNPLSVYGKSKLAGEKFVKDLLNKYFIVRTAWLYGKN 154
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ V L + +L+ D+ P Y +D+ K+I L +
Sbjct: 155 GGNFVKTMLKLAQERDLLT------VVDDQVGSPTYAKDLAKVIAELIT------TNLYG 202
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ S Q A+ + E +KPV++ R P+ MD L Q L+
Sbjct: 203 TYHASNNGECSWYQFAKKIFEYTDTEIE-VKPVTSEEFVRPATRPSYSVMDNYSLEQGLS 261
Query: 302 IDPVTYKDGVK 312
+ ++D +K
Sbjct: 262 YEMRDWQDALK 272
>gi|440228478|ref|YP_007335569.1| dTDP-4-dehydrorhamnose reductase [Rhizobium tropici CIAT 899]
gi|440039989|gb|AGB73023.1| dTDP-4-dehydrorhamnose reductase [Rhizobium tropici CIAT 899]
Length = 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 22/259 (8%)
Query: 70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLS 127
AL +P ++VN AA + E+D + AM++N P L W + + LLIH S
Sbjct: 45 AALDEHKPGIIVNPAAYTAVDRAESDNELAMAVNATAPGILARWAA----DNGALLIHYS 100
Query: 128 TDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV 186
TD V++G K+ Y+EED + P +VYG+SK E+ + ++ AILR+S +YG + +
Sbjct: 101 TDYVFDGTKADPYQEEDVVNPQSVYGESKWRGEEAVRASGAHHAILRTSWVYGHHGSNFL 160
Query: 187 PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE----DKQMQLL 242
L + S L+ D+ P + + + R ++ D
Sbjct: 161 KTILRLAGERSALN------IVADQVGAPTSAALIADVTRTVIERIMASQAPGDLSGTYH 214
Query: 243 LNVGGPDR----VSRVQMAEVVAEIR-GYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
L G + + + A +R S +KP+S + + PA+ +D KL+
Sbjct: 215 LTAQGSTSWYGYAAHIVREALAANVRLALSLDALKPISTAEYPTPAKRPANSRLDCRKLM 274
Query: 298 QTLNIDPVTYKDGVKLTLA 316
++ +++GV LA
Sbjct: 275 DRFDVALPLWQEGVDDVLA 293
>gi|147918713|ref|YP_687564.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
gi|110622960|emb|CAJ38238.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
Length = 289
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 31/302 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+++V G G LG L++ + + K A S P +P F+ ++ + +
Sbjct: 1 MILVTGCGPLGAGLVKAMEDQPAK----GACDESNP-------DIPRGFMTYNFEKEQDI 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ +P ++V + CE + AM N + + + +N L+
Sbjct: 50 ---RRIVDVEKPKILVLTEEIDNVEYCEENRMDAMYYNTRAQ--RYFAEAAQNVGARLVL 104
Query: 126 LSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
S+ V++G K Y EED P+NVY ++KV AE + ++ +F ++R +YG
Sbjct: 105 RSSAMVFDGRKPGGMYTEEDHTNPLNVYAETKVMAETAV-DRTKDFLVVRLGELYGAYF- 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ ++S LS G+ VE D P+Y+ D + I LT ++
Sbjct: 163 ----DNFASHLVES-LSMGQNVELATDMYFSPIYLDDAIAAIKELTLNGMTG------FY 211
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+V GP+R+S + + +A G+S + P++ + + V P D S+ KL + +
Sbjct: 212 HVAGPERLSHYEFGKKIARAFGFSEDRLVPITMADLKLTVLVPRDTSLSSAKLNALMKVR 271
Query: 304 PV 305
V
Sbjct: 272 GV 273
>gi|257058395|ref|YP_003136283.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
gi|256588561|gb|ACU99447.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P++++N AA + E +P+ A+++N + + ++ L+H+STD V++G
Sbjct: 52 HPNIIINGAAYTAVDQAEKEPELALAVNGIAPTI--IAEEAHKLGAFLLHISTDYVFDGT 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y EED PV+VYG+SK+A E+ I + + ILR++ +YG S +
Sbjct: 110 KNIPYTEEDPTHPVSVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKS--------NF 161
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++L G E++ D+ P + +D+ + I L
Sbjct: 162 VKTMLRLGQEREQIRVVSDQIGSPTWAQDIAQTINQL 198
>gi|70985224|ref|XP_748118.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
fumigatus Af293]
gi|66845746|gb|EAL86080.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
fumigatus Af293]
Length = 304
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 36/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
VL+ G TG LG+ + + G+ Y A TP P +L L D+
Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRA-----TP-PTILKADLEKP-----EDI 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ D L V ++CAA P +C+ +P+ A +NV ++ L+ T ++
Sbjct: 54 KNL--LDEAKL------VPLHCAANRSPDLCDKNPEQARRVNVDATRT--LAEETSARKA 103
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LL+++STD V+ G ++ Y+ + E +P N YG+ K E + E + +LR +
Sbjct: 104 LLVYISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPL 163
Query: 177 IYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG Q S ++ I I + V+ R P DV ++ + ++L E
Sbjct: 164 LYGTAQNNSESAVNILIDAIWKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYLKE 223
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAEVVAEIRGYS-TSLIKPVSASSVDRGVQSPADISM 291
++ L L+ DR+++ +M E +AE+ G S +I+ + + VQ P D +
Sbjct: 224 RPRIHELPKVLHFSSEDRMTKYEMCEKLAEVLGLSLAGMIRNKQGNDPNASVQRPYDTHL 283
Query: 292 DITKLVQTLNID 303
TK+++ L +D
Sbjct: 284 S-TKVLKDLGVD 294
>gi|363889678|ref|ZP_09317035.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM5]
gi|363892910|ref|ZP_09320056.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM2]
gi|361962154|gb|EHL15302.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM2]
gi|361966435|gb|EHL19347.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM5]
Length = 286
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ G G LG+ L + +++ + + Y +DVD
Sbjct: 2 RYLITGANGQLGRVLQKEINKSDNEIY------------------------LYDVDTMDI 37
Query: 65 SGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ ++ V PDV+ NCAA + CE D D+A IN + L+ E+ ++
Sbjct: 38 TDYEQVKNIILDIIPDVIFNCAAHTNVDKCEEDIDNAYKINAIGAQN--LAMIAEHIDSK 95
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD V+ G + E + A P VYGKSK+ E+ + + CS + I+R++ +YG
Sbjct: 96 LVHFSTDYVFSGEDEIPRIESDFANPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+ V L + + +K+ D+ P Y +D+ K+ L L+
Sbjct: 156 N-NFVRTMLNLS------KQNDKLTVVGDQFGSPTYTKDLAKVALNLS 196
>gi|417925576|ref|ZP_12568995.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
SY403409CC001050417]
gi|341591202|gb|EGS34410.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
SY403409CC001050417]
Length = 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ R+ + G G +G+ L + L E +V AT + ++D +
Sbjct: 1 MSRNRIWISGADGKIGKVLQKYLDPFED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P++++NC+AL+ P +C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNIIINCSALTDPVLCQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|302379941|ref|ZP_07268420.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
ACS-171-V-Col3]
gi|302312167|gb|EFK94169.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
ACS-171-V-Col3]
Length = 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L Q LD L + D D
Sbjct: 1 MTRNRIWISGADGKIGKVL------------------------QKYLDPLEDEVLATDKD 36
Query: 61 LKSGSGFDAVAL--KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T +
Sbjct: 37 IVDIVNSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVD 96
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S +
Sbjct: 97 AK--IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWL 154
Query: 178 YGP 180
+ P
Sbjct: 155 FSP 157
>gi|424894482|ref|ZP_18318056.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393178709|gb|EJC78748.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ +IH+ST
Sbjct: 44 AAAFSTLRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAVAEAAARIGVP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A E + N+ ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATAPISVYGRSKLAGETAVAAANPNYVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ R ++ ++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQRGCPTSALDIADAILAIATRLEADPAPSLRGTF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ AE+ G ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAELLKSGGKKVGVERIPTADYPTPAKRPANSRLNGDKLAKTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKQSMMIVM 287
>gi|297587791|ref|ZP_06946435.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516]
gi|297574480|gb|EFH93200.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516]
Length = 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L + L +E +V AT + ++D +
Sbjct: 1 MTRNRIWISGADGKIGKVLQKYLDPLED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|239813762|ref|YP_002942672.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110]
gi|239800339|gb|ACS17406.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 131/318 (41%), Gaps = 34/318 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++P+ A +N S V ++ + L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPEFARKLNATSPGV--VAEAAQQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G S +KE+D P++VYG++K+ E+ + C+ I R+S +Y +
Sbjct: 101 HYSTDYVFDGSGSTPWKEDDATGPLSVYGRTKLEGEQLVARHCAKHLIFRTSWVYAARGG 160
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ L I + +++ +D+ P + + L + + L
Sbjct: 161 NFAKTMLRIA------KERDRLTVINDQFGAPTGAELLADVTAHAIRATLQDPAKAGLYH 214
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSL------IKPVSASSVDRGVQSPADISMDITKLV 297
V G + V+ + + L + PV S+ PA+ +D KL
Sbjct: 215 AVAGGETTWHSYARFVIEQAKAAGVELKAGPEAVDPVPTSAFPTPATRPANSRLDTRKLQ 274
Query: 298 QTLNIDPVTYKDGVKLTL 315
T + ++ GV L
Sbjct: 275 ATFGLVLPHWQQGVARML 292
>gi|430752003|ref|YP_007214911.1| dTDP-4-dehydrorhamnose reductase [Thermobacillus composti KWC4]
gi|430735968|gb|AGA59913.1| dTDP-4-dehydrorhamnose reductase [Thermobacillus composti KWC4]
Length = 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V++CAA + + E++PD+A +N + ++ E L+++STD V++G
Sbjct: 58 RPDAVIHCAAHTAVDLAESEPDAAYRVNAYGT--RNVAVAAEEIGAKLVYISTDYVFDGR 115
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D P +VYGKSK+A E C + I+R+S +YG + V L
Sbjct: 116 GSQPYREYDRTDPQSVYGKSKLAGELLAQTLCRRYFIVRTSWVYGKYGSNFVKTML---- 171
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ + ++++ HD+ P Y D+ + +L L + + S
Sbjct: 172 --RLAGERDRLKVVHDQVGSPTYTLDLAEFLLELVQ------TDYYGIYHASNTGVCSWY 223
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ A+ + E RG ++P + + R PA +D
Sbjct: 224 EFAKAIFEERGLRVE-VEPCTTADYPRPAPRPAYSVLD 260
>gi|237745880|ref|ZP_04576360.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS]
gi|229377231|gb|EEO27322.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS]
Length = 279
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
LK D ++NCAA + E++P A ++N SL WL+ + + +IH+STD V
Sbjct: 43 LKNNCFDCIINCAAYTAVDRAEDEPVQANAVNHLGSL--WLAKYGKR----IIHISTDYV 96
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G Y EED+ P+++YGK+K+A EK + + +LR++ +Y P
Sbjct: 97 FDGTSHVPYHEEDKTNPLSIYGKTKLAGEKAVLDYAETAVVLRTAWVYSP---------Y 147
Query: 191 PIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
++ ++L G E + D+ P D+ K I+ + + + K + N G
Sbjct: 148 GNNFVKNILRMGRTRESLRVVSDQIGSPTSAGDLAKSIIEILQQMKTGKKDVYHFTNEG- 206
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLI 271
S +A V ++ G ST +I
Sbjct: 207 --VCSWYDLAVAVMDLAGLSTPVI 228
>gi|169823956|ref|YP_001691567.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328]
gi|167830761|dbj|BAG07677.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328]
Length = 281
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ R+ + G G +G+ L + L E +V AT + ++D +
Sbjct: 1 MSRNRIWISGADGKIGKVLQKYLDPFED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P++++NC+AL+ P +C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNIIINCSALTDPVLCQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|381167150|ref|ZP_09876358.1| dTDP-4-dehydrorhamnose reductase [Phaeospirillum molischianum DSM
120]
gi|380683458|emb|CCG41170.1| dTDP-4-dehydrorhamnose reductase [Phaeospirillum molischianum DSM
120]
Length = 297
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A+ +PDVV+NCAA + EN+ D A +IN V L+ + +L+HLSTD
Sbjct: 46 AMAECRPDVVLNCAAYTAVDRAENETDLAHAINAQGPAV--LAELCGKRGIVLLHLSTDY 103
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
V++G K S Y +D ++P+ VYG +K A E+ + C +LR+S +Y
Sbjct: 104 VFDGTKASAYLPDDPVSPLGVYGATKEAGERAVRAACPQHFLLRTSWVY 152
>gi|187923382|ref|YP_001895024.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN]
gi|187714576|gb|ACD15800.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN]
Length = 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-DLKS 63
+V V+G +G LG+ L+ L++ + V AT S P P V D+ D ++
Sbjct: 3 KVAVIGASGLLGRALVDELAQQSD--WQVVATAFSRPAP---------GKVSLDIRDARA 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F ++ PD +V AA P VCE+DP A ++NV + V L+S +
Sbjct: 52 VEQF----VEREAPDALVIAAAERRPDVCEHDPALARALNVDA--VRTLASAANRRGAWT 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ +STD V++G Y+ + AP+N YG SK+ E + E +LR ++YGP
Sbjct: 106 LSISTDYVFDGTHPPYQHDSVPAPLNAYGHSKLEGEHALTESTDLGCVLRLPLLYGP 162
>gi|407769965|ref|ZP_11117338.1| dTDP-4-dehydrorhamnose reductase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407287109|gb|EKF12592.1| dTDP-4-dehydrorhamnose reductase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 29/248 (11%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ QP V++N AA + + END ++A IN + V+ ++ ++ + LIH ST
Sbjct: 46 ASAIRDNQPHVIINAAAYTAVDLAENDRENAYHINCDA--VDMMARAADDLDIPLIHFST 103
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G Y E+D +AP+ VYG SK+A E + I R++ +Y SP
Sbjct: 104 DYVFDGASQRPYCEDDSVAPLGVYGASKLAGEGAVRAATKRHLIFRTAWVY-----SPFG 158
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------------TNRWLSE 235
K+ ++ + ++++ + + +D+ CP D+ L L L
Sbjct: 159 KNF-VKTMLGLMTQRDVLTIVNDQHGCPTSAIDLANATLRLLPVILDLNFNGFGTYHLVS 217
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYS--TSLIKPVSASSVDRGVQSPADISMDI 293
D QM D R+Q A + ++ I PV++ + + PA M
Sbjct: 218 DNQMTWF------DFAKRIQDAAIAKFGANWTGKNCWIDPVNSDAFPTIAKRPAYSIMST 271
Query: 294 TKLVQTLN 301
K T +
Sbjct: 272 QKFTDTFD 279
>gi|303234358|ref|ZP_07320997.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
BVS033A4]
gi|302494474|gb|EFL54241.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
BVS033A4]
Length = 281
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L Q LD L + D D
Sbjct: 1 MTRNRIWISGADGKIGKVL------------------------QKYLDPLEDEVLATDKD 36
Query: 61 LKSGSGFDAVAL--KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T +
Sbjct: 37 IVDIVNSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVD 96
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S +
Sbjct: 97 AK--IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWL 154
Query: 178 YGP 180
+ P
Sbjct: 155 FSP 157
>gi|444346154|ref|ZP_21154128.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443542040|gb|ELT52417.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 273
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 14/243 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+V++N AA + E + SA S+NV V +L+ + ++H+STD V++G
Sbjct: 32 KPNVIINAAAYTSVDQAELEVSSAYSVNVRG--VQYLAEAAIRHNSAILHVSTDYVFDGY 89
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
KS YKE D I P+ VYGKSK E+ + ILR+S +G + V L +
Sbjct: 90 KSGKYKETDIIHPLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGNNFVKTMLRLAK 149
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L D+ P Y D+ +++ + + + + + + G VS
Sbjct: 150 NRDILG------VVADQIGGPTYSGDIASVLIQIAEKIIVGETVKYGIYHFTGEPCVSWY 203
Query: 255 QMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A E VA+ + L+ ++ + + PA+ +D+TK+ Q I P ++
Sbjct: 204 DFAIAIFDEAVAQKVLENVPLVNAITTADYPTLAKRPANSCLDLTKIQQAFGIQPSDWQR 263
Query: 310 GVK 312
+K
Sbjct: 264 ALK 266
>gi|83645210|ref|YP_433645.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396]
gi|83633253|gb|ABC29220.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396]
Length = 303
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG L + LS + G+ + AL + DL
Sbjct: 3 IMVTGATGQLGWELARSLSML-GR-----------------VRALGRN----QCDLNDPG 40
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
AV +PDV+VN AA + E+D AM +N S V L+ +N L +H
Sbjct: 41 SLRAVVRDI-KPDVIVNAAAYTAVDKAESDRGGAMRVNSDSVAV--LAEEAKNCGALFVH 97
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G K Y E D + P+N YG SK++ E I + N+ I R+S +Y + +
Sbjct: 98 YSTDYVFNGEKGAPYVEVDPVCPINTYGYSKLSGENLIRQVDGNYLIFRTSWVYASRGKN 157
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
+ L + VLS D+ P + RD+ ++ L
Sbjct: 158 FLLTMLNLAQTKEVLS------VVSDQRGAPTWARDLAQMTL 193
>gi|330806982|ref|YP_004351444.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423694816|ref|ZP_17669306.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Q8r1-96]
gi|327375090|gb|AEA66440.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009436|gb|EIK70687.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Q8r1-96]
Length = 289
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +++N AA + E++P+ A +IN + + L+ LIH STD V++G+
Sbjct: 50 KPGLIINAAAHTAVDQAESEPERAFAINATAPGI--LAQAAVALGVPLIHYSTDYVFDGL 107
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K + Y E+D P++VYG+SK+A E I + ILR+S +Y + + + L +Q
Sbjct: 108 KPAPYTEDDTPNPLSVYGRSKLAGENAIRQAGGQHLILRTSWVYSTEGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + L RW + ++ S
Sbjct: 164 --RLLQEKPQLRVVADQVGAPTWAGTIADSTAQLIERWQAGQPGAWGTYHLTARGETSWF 221
Query: 255 QMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E R +L++P+ +S+ P + +D T+L + + ++ +
Sbjct: 222 GFAQAIGENLLDRHKPCALLEPIESSAYPTPAPRPLNSRLDCTRLFKEWGVSQPDWRSAL 281
Query: 312 KLTLAAE 318
+ LA +
Sbjct: 282 QQCLAGQ 288
>gi|330995799|ref|ZP_08319696.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT
11841]
gi|329574529|gb|EGG56094.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT
11841]
Length = 295
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 49/316 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LG + QLL P F +F D+K
Sbjct: 11 KNILVTGCNGQLGNEM------------------------QLLATGYP-EFNYFFTDVKE 45
Query: 64 GSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D A+K D VVNCAA + V + + D A + +L+ +
Sbjct: 46 LDITDENAVKSFVKTNGIDCVVNCAAYTA--VDKAEADEAFCNILNHIAPGYLAKAVHEQ 103
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+I +STD V++G Y+EE+ P VYG++K+A E+ + C I+R++ +Y
Sbjct: 104 GGCMIQVSTDYVFDGTTHIPYREEEPTCPATVYGRTKLAGEEAVMRNCPESVIIRTAWLY 163
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVE---FFHDECRCPVYVRDVVKIILALTNRWLSE 235
+ ++ ++L G + E D+ P Y RD+ I A+ L++
Sbjct: 164 ---------STFGNNFVKTMLRLGREKESLGVIFDQIGTPTYARDLAVAIFAV----LTQ 210
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
D + + + +S + + I G +T ++P+ P +D TK
Sbjct: 211 DF-VPGIYHFSNEGAISWYDFTKAIHRIAGITTCKVRPLHTEEYPAPAARPHYSVLDKTK 269
Query: 296 LVQTLNIDPVTYKDGV 311
+ +T +ID ++D +
Sbjct: 270 IKETYHIDIPYWEDSL 285
>gi|296395056|ref|YP_003659940.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985]
gi|296182203|gb|ADG99109.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985]
Length = 294
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 20/256 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
AVA DVVVNCAA + E DP+ A IN + V L+ IH+ST
Sbjct: 47 AVAETLRPGDVVVNCAAQTQVDAAEADPEGAHRINAEA--VGNLARACARVGARFIHVST 104
Query: 129 DQVYEGVKSF---------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
D V+ G + Y+ +DE P+ VYG+SK+A E+ ++ ++R+S +Y
Sbjct: 105 DYVFAGQEEGWFSARLARPYEADDEPRPIQVYGESKLAGERLAFQHNPRSVVVRTSWVYT 164
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ S + +S G + D+ P D+ +L L W + +
Sbjct: 165 GERHGRDFVSTAREQAES----GSAMRAVTDQVGSPTRCVDLAYGLLELA--WQGGEGGL 218
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
N GG SR +A V E G L++P + ++R P + + +Q
Sbjct: 219 LQFSNTGG---CSRHDLARAVFEELGADPDLVRPCMSWELERPAARPPYSVLSVASWMQR 275
Query: 300 LNIDPVTYKDGVKLTL 315
P ++D ++ L
Sbjct: 276 GLRPPRAWRDALRDAL 291
>gi|223477966|ref|YP_002582090.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4]
gi|214033192|gb|EEB74020.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4]
Length = 287
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 140/309 (45%), Gaps = 33/309 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V ++G G LG L++ L + G + +P + DV +
Sbjct: 2 KVAIIGANGQLGTDLVKVLRKEPG------------------FEVVPLTHGDLDVTVSET 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G L+ +P+V++N AA E P+ A ++N +L ++ E + +
Sbjct: 44 LGI----LRKVKPNVIINTAAYVRVDDAEIYPEKAFAVNAIGALN--VAKIAEKIGAINV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y EED P+NVYG SK+A E F I+R + +YG
Sbjct: 98 YISTDYVFDGEKGVPYTEEDVPNPINVYGTSKLAGEIFTRNYSRRHYIIRVASLYGKAGA 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + + W+ +GEK+ +D+ P + DV + + L + + ++
Sbjct: 158 SGKGGNF-VNWVIEKAKRGEKLRIVNDQVMSPTHTLDVARTLKEFLK--LQPEFGVYHMV 214
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G S + + + EI G++ I+P+ ++ ++R + P+ +++ +L L +
Sbjct: 215 NEG---YCSWYEFTKAIFEILGWNVE-IEPIKSNELNRLAKRPSFSALENRRL-HELGLK 269
Query: 304 PVTYKDGVK 312
+++G++
Sbjct: 270 MPDWREGLR 278
>gi|296447933|ref|ZP_06889842.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b]
gi|296254570|gb|EFH01688.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b]
Length = 300
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ + D +V AA + E +P+ AM +N + +++ L+H+STD
Sbjct: 47 ALRDSRCDAIVGAAAYTAVDKSEQEPEIAMRVN--GAGAGFVAEAAAELGVPLVHISTDY 104
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G + Y+E+D AP+ VYG SK+ E + C ILR++ +Y P
Sbjct: 105 VFDGTAARPYREDDPTAPLGVYGASKLEGETRVLAACPGATILRTAWVYSP--------- 155
Query: 190 LPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNV 245
++ ++L G E+V D+ P D+ LA+ R + D ++ + ++
Sbjct: 156 FGANFVRTMLRLGETREEVGVVADQLGNPTSALDIADATLAVVTRLAQDADPALRGVFHM 215
Query: 246 GGPDRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
G S +AE + A G + ++ ++ + + PA+ +D +KL +
Sbjct: 216 TGSGEASWADVAEAIFARAAEHGRAPVRVRRITTADYPTPAKRPANSRLDNSKLAR 271
>gi|221212106|ref|ZP_03585084.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
gi|221168191|gb|EEE00660.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
Length = 316
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 10/229 (4%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A +P VV CAA P VCE DP A +INV + + + + +STD
Sbjct: 60 AFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPAR--IGALAARYGAWTLGISTDY 117
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP---QTISPVP 187
V++G + Y+E+ P+N+YG++K+ E + +LR ++YGP + S V
Sbjct: 118 VFDGRAAPYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLYGPIADWSESAVT 177
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
+P + S + + V R P Y DV +I L +R L+ + + + G
Sbjct: 178 SLVP-AIVASARADADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAGASVLG-IRHWSG 235
Query: 248 PDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
+ +++ ++A+ +A+ G SL P+ + P D +D +L
Sbjct: 236 DEAMTKYEIAQRIADALGLRASL-APIDTPA--DATPRPYDCHLDAAQL 281
>gi|187927733|ref|YP_001898220.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J]
gi|187724623|gb|ACD25788.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J]
Length = 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 128/328 (39%), Gaps = 49/328 (14%)
Query: 2 SKKRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S+ R++V G TG +G LL QGL EI + D
Sbjct: 5 SRPRIVVTGTTGQVGWELLRSLQGLGEI----------------------------ISVD 36
Query: 59 VDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ S DAV ++ +P ++VN AA + E +PD A +N + L L+
Sbjct: 37 RSVVDLSRLDAVRALIRSIEPSIIVNAAAYTAVDKAEQEPDPAFRLN--ADLPGVLAEEC 94
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ + IH STD V++G K Y E D P+NVYG SK+A E + + R+S
Sbjct: 95 KRTQAAFIHYSTDYVFDGRKDGPYTEADATNPLNVYGASKLAGEHNALDANPATLVFRTS 154
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + + + I + + +++ D+ P + R + + + R L
Sbjct: 155 WVYGARGKNFLTT------IQRLAKERQQLRVVSDQIGAPTWSRSIADLTAHVIARGLGS 208
Query: 236 DKQMQLLLNVGGP-------DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
V G S AE + + G + ++P+ A P +
Sbjct: 209 THAEPAWWTVHGGVYHLTSNGSTSWYGFAEAILQRSGITGVAVEPIPAMEYPTPAVRPGN 268
Query: 289 ISMDITKLVQTLNIDPVTYKDGVKLTLA 316
+ + KL + P +++ + LA
Sbjct: 269 SRLALNKLQSVFGLVPESWEQSLTKCLA 296
>gi|333924766|ref|YP_004498346.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750327|gb|AEF95434.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 285
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL-LIHLSTDQVY 132
+PD+++NCAA ++ CE + + A +N P +L + N++N+ L+ +STD V+
Sbjct: 50 RPDIIINCAAYTLVDKCEEEIELAYRVNALGPRNL-----AVICNEQNIPLVQISTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E+D P+++YGKSK AE +I + F I+R+S ++G + V L
Sbjct: 105 DGTKGANYLEDDIKNPLSIYGKSKSLAEDYITALTNKFYIVRTSWLFGENGNNFVKTMLQ 164
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
I + + +D+ P Y RD+ + I L ++ + ++
Sbjct: 165 IG------KTRDSITVVNDQFGSPTYTRDLAQAIACLI------EEPRYGIYHITNSGYT 212
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+ + A+ + + GY + ++P+S ++R P
Sbjct: 213 NWYEYAKYIFALAGYKVT-VQPISTEELNRPAPRP 246
>gi|367037661|ref|XP_003649211.1| hypothetical protein THITE_2040718 [Thielavia terrestris NRRL 8126]
gi|346996472|gb|AEO62875.1| hypothetical protein THITE_2040718 [Thielavia terrestris NRRL 8126]
Length = 324
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 36/322 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ K LV G TG LG+ +++ + G + T S D L VD
Sbjct: 1 MTGKTALVTGATGLLGRQVVKAFA-FHG--WSAKGTGFSRA------DGLN----ILKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + V L +P VV++CAA P E DP ++NV +S L++ +E
Sbjct: 48 LSNTAEIERV-LDEQKPQVVIHCAANRFPDKVEQDPAGTRALNVEASRA--LAALCAARE 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIY------EKCSNFAIL 172
LLI++STD V+ G ++ Y+ + E P N+YG++K+ E+ + K +L
Sbjct: 105 ALLIYISTDYVFPGRPGEAPYEADAEPGPTNLYGQTKLDGERAVLGTFAAAGKEGGAVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLS---KGE-----KVEFFHDECRCPVYVRDVVKI 224
R ++YG +S +D V+ +GE KV H R P DV ++
Sbjct: 165 RVPVLYGQVEDGKNAESAVNVLMDVVMKAARQGEEVGAKKVAMDHWALRYPTNTEDVARV 224
Query: 225 ILALTNRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDR 281
+ R+L D + L +L D+ ++ ++ ++ EI G + I+P + +
Sbjct: 225 CYDIAVRYLEADNKAALPRVLQFSSEDKYTKYEICQLFGEIMGVPINRIEPNTEGNDPNA 284
Query: 282 GVQSPADISMDITKLVQTLNID 303
VQ P D + T+ ++ L ID
Sbjct: 285 SVQRPYDCHLS-TRALKELGID 305
>gi|262193435|ref|YP_003264644.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365]
gi|262076782|gb|ACY12751.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365]
Length = 281
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 68 DAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENLL 123
D VA F QPD+V++CA + CE PD A +NV S L++ L + T +
Sbjct: 45 DRVAALFAREQPDMVLHCAGVCDVAKCEESPDFAHLVNVLSMDILLDHLPAHTR-----V 99
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I+LS+D V+ G Y E P++VYG+++V AE+ + ++ + I+R + GP
Sbjct: 100 IYLSSDHVFSGDSGPYTESTPPDPLSVYGRTRVQAERILLDRRPDSLIIRGGLWIGPSYN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + W+ ++G + DE R V+ D V ++AL +S + +
Sbjct: 160 GRLGH---LDWLRYRHARGLPMTVITDEHRSAVWADDAVARVMALAEAGVSGTRHL 212
>gi|448507033|ref|ZP_21614747.1| dTDP-4-dehydrorhamnose reductase [Halorubrum distributum JCM 9100]
gi|448523974|ref|ZP_21619161.1| dTDP-4-dehydrorhamnose reductase [Halorubrum distributum JCM 10118]
gi|445699134|gb|ELZ51167.1| dTDP-4-dehydrorhamnose reductase [Halorubrum distributum JCM 9100]
gi|445701047|gb|ELZ53038.1| dTDP-4-dehydrorhamnose reductase [Halorubrum distributum JCM 10118]
Length = 493
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 43/320 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFV--FFDVD 60
KR+L+VG +G LG L + L Y V S + LD V FFD
Sbjct: 3 KRILIVGKSGLLGTKLHERLV----NKYRVGGVSKSGAGMNNRELDITEQDAVETFFDT- 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
F DVV++ AA + CE++ A NV + L + +
Sbjct: 58 -----------YSF---DVVIHVAANTDVDFCEHNQTEAWETNVEGTKNLVLE--CKKRG 101
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+LS+D ++ G Y+ + PVN YG +K+ E+ I E+ +F I+R +YG
Sbjct: 102 IKFCYLSSDYIFSGANPPYEADANPDPVNYYGMTKLEGERIIREELHDFVIIRPGKLYG- 160
Query: 181 QTISPVPKSLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII-LALTNRWLSEDKQ 238
+P P W+ + LS+ V + P + DV + + A+ + W
Sbjct: 161 --YTPDFGCDPFTSWVRNSLSEDSTVRVDDSIVKYPTLIDDVSRFVEAAIESDWTG---- 214
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
L N GPD ++ + A +A G+ +S ++ +A AD D+ +
Sbjct: 215 ---LFNFSGPDSTTKYEWARSIAANYGFDSSRVEAKTADPY-------ADRPQDVRYVST 264
Query: 299 TLNIDPVTYKDGVKLTLAAE 318
IDP + G+++ E
Sbjct: 265 DFGIDPHGVETGIEVMYKQE 284
>gi|257053212|ref|YP_003131045.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940]
gi|256691975|gb|ACV12312.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940]
Length = 297
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 10/231 (4%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +PD V+NCAA++ CE A IN + ++S + L+H+STD V
Sbjct: 57 LEERRPDAVINCAAMTDVDACETASGVAHEINAEAP--GQIASACAERAIPLVHVSTDYV 114
Query: 132 YEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G + Y E P+ VYG+SK E + E + I+R S IYG S
Sbjct: 115 FDGDTDTPYTESATPNPIQVYGESKRDGEVRVRESEAETIIVRPSFIYGVHRASGELTGF 174
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
P W+ L+ GE F D+ P ILAL + + ++V
Sbjct: 175 P-AWVRDRLAAGESTPLFTDQWVTPSRAGATASTILALL------ETEFHGTVHVASRSC 227
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
V + + L++ S + VDR P D + + ++ L+
Sbjct: 228 VMPYTFGQAICRQMDAPAVLLEEGSQTEVDRAAARPTDTCLAVDRVESVLD 278
>gi|189500819|ref|YP_001960289.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1]
gi|189496260|gb|ACE04808.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1]
Length = 286
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GG G LG L + +AA H +F F+D+ L +
Sbjct: 3 ILVTGGNGQLGSELKE-----------LAARHEGM------------TFFFYDLPLLDIT 39
Query: 66 GFDAVALKFGQP--DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V G+ D +VNCAA + E++P++A +N V L+ + + LL
Sbjct: 40 DRAMVHRVCGEHAVDAIVNCAAYTAVDRAEDEPEAAYRVNRDGPEV--LAEAAKERHALL 97
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V+ G Y E D ++P+ VYG+SK E+ I ++ I+R+S +Y
Sbjct: 98 VHVSTDYVFNGESCTPYHEGDAVSPLGVYGQSKWEGEEKIRAIAPSYMIVRTSWLYSSHG 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V L + S+ ++++ D+ P D+ + ++++ +R+ E +
Sbjct: 158 RNFVKTMLRLG------SERDELKVVFDQAGTPTLAADLAEALVSMLSRYDREHTYAE-T 210
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ S A V R ++ PV + + P +D K+ + N+
Sbjct: 211 YHYSNEGVCSWYDFARAVMRARQLPCRVL-PVGSGEYPTKAKRPHYSVLDKGKIKEHWNL 269
Query: 303 DPVTYKDGVKLTL 315
+ ++D ++ L
Sbjct: 270 EIPHWQDSLERML 282
>gi|397663325|ref|YP_006504863.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Legionella pneumophila subsp.
pneumophila]
gi|395126736|emb|CCD04919.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Legionella pneumophila subsp.
pneumophila]
gi|410173932|emb|CCO02576.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
Length = 294
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 14/240 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +N + V+ L ++ K LIHLSTD V++G
Sbjct: 51 KPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVSHLVNYCSFKNIPLIHLSTDYVFDGE 108
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D PV+ YG++K E+ I + + ILR S ++G Q + V L
Sbjct: 109 KEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTIL---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++ S +++ D+ P RD+ +++ + + L + G +
Sbjct: 165 --NLASSRKELNIVADQWGRPTSARDIARVLFEIVQKTRHSSFDYWGLYHYAGQGVTNWH 222
Query: 255 QMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
+ A V + L + P+ + P + +D TK+ L I ++K+
Sbjct: 223 EFANVFLNLAKEKQLLLTLTDLNPIKSQEYPTRATRPKNSVLDTTKIETILGIKSCSWKN 282
>gi|75909561|ref|YP_323857.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75703286|gb|ABA22962.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413]
Length = 296
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 31/221 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L++GG G +GQ + Q L+ P +++ A P +DL
Sbjct: 5 ILLIGGNGQVGQEIHQILA----------------PKYKVISAARPR------IDLTQAD 42
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ ++ QP +++N AA + E +P+ A +IN + + ++ ++ + LIH
Sbjct: 43 SLRQI-IQEVQPQIIINAAAYTAVDKAETEPEIATAINATAPQI--IAEESQKLGSFLIH 99
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G +S Y+E D P++VYGK+K+A E I + ILR++ +YG
Sbjct: 100 ISTDYVFDGQQSHPYQETDPTNPLSVYGKTKLAGEIAIQQTHPQHLILRTAWVYG----- 154
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
KS ++ + + ++ +++ D+ P + +D+ I
Sbjct: 155 SFGKSNFVKTMLRLGAERQEIRVVKDQIGSPTWAQDIADTI 195
>gi|320160045|ref|YP_004173269.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila
UNI-1]
gi|319993898|dbj|BAJ62669.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila
UNI-1]
Length = 311
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 26/300 (8%)
Query: 3 KKRVLVVGGTGYLGQHL-LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+KR+LV G +G LG L L + + E V +S L P S V D
Sbjct: 5 RKRLLVTGASGLLGISLCLDAVGDFE-----VIGVVNSRRLA-----GAPFSQVQADF-- 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ +G A ++ +PD VV+CAAL+ CE + SA+S + ++L ++
Sbjct: 53 -TQTGSAAKLIEEVRPDWVVHCAALADLDACEKN--SALSARLNANLPGEVAEACYRSGA 109
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+++STD V++G + Y+E+D+ P +VY + K E+ +++ AI+ YG
Sbjct: 110 RLVYISTDAVFDGERGGYREDDQPNPQSVYARDKWLGEQAVWQANPQ-AIVARVNFYGWS 168
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ +SL ++ + L+ G+ + F D CP+ + + +I+L + +K ++
Sbjct: 169 LLG--QRSLAEKFYYT-LAAGKGMMGFTDVYFCPLVNQHLGRILLEML------EKGLEG 219
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
L +V + S+ +A+ G LI+PVS + +++M + KL L
Sbjct: 220 LYHVFSAECQSKYAFGVALAKRFGLDAGLIRPVSVQEAGLAARRSPNLTMRVEKLEAALG 279
>gi|409394053|ref|ZP_11245300.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
gi|409121383|gb|EKM97513.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
Length = 274
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 22/249 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E ++A +N + L+ ++ + HLSTD V++G
Sbjct: 22 KPDLIVNAAAFTGVDAAETSVEAAYRVNRDGA--GNLARHADSHGIPIFHLSTDHVFDGK 79
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y E D+ AP++VYG SK E + ++ ILR+S +YG + +
Sbjct: 80 HSRPYVEHDKTAPLSVYGASKRDGEAQV-QQVEKHLILRTSWVYG---------AYGSNF 129
Query: 195 IDSVLS-KGEK-VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
++++L GEK + D+ CP + ++L L R+ S+ K L + G S
Sbjct: 130 LNTMLRLTGEKELRIVDDQVGCPTSSERIASVLLELAQRYQSDGKLPWGLYHFSGQSHCS 189
Query: 253 RVQMAEVV------AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
+ A+ + A I G S L P++ + PA +D T I P
Sbjct: 190 WFEFAQAIFDHVSRAGIIGRSPRLT-PITTEEYPTPAKRPAWSVLDCRLFESTFGISPTP 248
Query: 307 YKDGVKLTL 315
++ ++ TL
Sbjct: 249 WRADLQATL 257
>gi|333375129|ref|ZP_08466953.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330]
gi|332971546|gb|EGK10496.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330]
Length = 308
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 140/316 (44%), Gaps = 38/316 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K + L+ G G +G L+ ++++GK AA + LD VF
Sbjct: 16 KMKYLITGANGQVGSQLV---AQLQGKAEIFAADRAT-------LDITNRETVF------ 59
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A + +PD+++N AA + E++PD A +IN + L+ + +
Sbjct: 60 -------QAARTFRPDIIINAAAHTAVDKAESEPDLAHAINCTGA--ENLALAAQEVGAI 110
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++H+STD V++G ++ Y+E D +AP + YGKSK+A E+ + C+ ILR++ ++G
Sbjct: 111 VLHISTDYVFDGKGETAYRETDPVAPQSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEH 170
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQ 240
+ V L + + + + D+ P Y D+ ++ + + +++ D ++
Sbjct: 171 GNNFVKTMLRLG------ASRDTLGVVADQFGSPTYAGDIAAALIVMAEQIVNQKDNELF 224
Query: 241 LLLNVGGPDRVSRVQMA-----EVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ + G VS A + VA+ + + ++ + PA+ +D K
Sbjct: 225 GVYHFSGSPYVSWHGFASEIFVQAVAQGVLAKSPTLNAITTADYPTPAVRPANSRLDCGK 284
Query: 296 LVQTLNIDPVTYKDGV 311
+ I P ++ +
Sbjct: 285 VQAAFGIAPSDWRKAL 300
>gi|78357226|ref|YP_388675.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio alaskensis G20]
gi|78219631|gb|ABB38980.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio alaskensis G20]
Length = 294
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 53/313 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLS----EIEGKPYDVAATHHSTPLPQLLLDALPHSFVF 56
++ K V++ G TG LGQ L+ L+ ++E + A H S L + + H+
Sbjct: 3 VAPKAVVLGGRTGLLGQALVADLTRAGWQVEAHGREDADVHDSAALEKYICS---HA--- 56
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
PDV+ N A + E + D+AM +N SL L
Sbjct: 57 --------------------PDVLFNAVAYTQVDKAEEEQDAAMRLN--KSLPALLGRLA 94
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRS 174
L+H STD V+ G K Y E+DE AP ++YG SK+A E+ + + I+RS
Sbjct: 95 CTGNMHLVHYSTDFVFNGRKETPYTEDDETAPQSIYGLSKLAGEQVLLQMNLPRLTIIRS 154
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
S ++GP + +Q I + +++ HD+ P Y D LA +R L
Sbjct: 155 SWLFGPG------RGNFVQTILGLCETRQEITVVHDQVGSPTYTPD-----LAAGSRLLV 203
Query: 235 EDKQMQLL-LNVGGPDRVSRVQMAEVVAEIRGYSTS--LIKPVSASSVDRGVQSPADISM 291
E L L+ GG + E+ AE + ++P+ +++ + PA +
Sbjct: 204 EKGGTGLFHLSNGG-----QATWCELAAEAVSLAQKPCQVRPIPSAAYPQRATRPAYSVL 258
Query: 292 DITKLVQTLNIDP 304
D ++ I P
Sbjct: 259 DCSRFTGITGIKP 271
>gi|330991365|ref|ZP_08315316.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp.
SXCC-1]
gi|329761384|gb|EGG77877.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp.
SXCC-1]
Length = 270
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 16/241 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPS-SLVNWLSSFTENKENLLIHLSTDQVYEG 134
+PD+V+N AA + E +PD A N +L+ WL + + L+H+STD V+ G
Sbjct: 22 RPDLVINTAAWTAIDAAEEEPDRARLTNTEGPALLAWLCA---GQAVPLLHVSTDHVFSG 78
Query: 135 VKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+ Y+E D P +VYG+S+ EK + C+ ++R+S +YGP + V L
Sbjct: 79 TRGRPYRETDPTDPQSVYGRSRAEGEKAVLAACARAMVVRTSWVYGPYGRNFVRTML--- 135
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ--MQLLLNVGGPDRV 251
+ +++ D+ P D+ +L + R Q + + +V G
Sbjct: 136 ---EAACRETQLQVVADQSGHPTAAPDLADALLQVAARIRQSGWQPAYRGVFHVAGGGSA 192
Query: 252 SRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
+ ++A A G+ + PV + D +D + Q ++ ++
Sbjct: 193 TWHELASAAVAHAGRHGHPAPPVMPVMTADRPTAAARRVDARLDCGRFRQVFGLELPHWR 252
Query: 309 D 309
D
Sbjct: 253 D 253
>gi|330466928|ref|YP_004404671.1| nad-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
gi|328809899|gb|AEB44071.1| nad-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
Length = 235
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+H+S+D ++ G Y ++D P+ YG +K AAE + + ++R+S+I G
Sbjct: 62 LVHMSSDALHAGRPEAYADDDPPTPIFPYGAAKAAAETVVRALDPSAVLVRTSLIVG--- 118
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S IQ L+ + F DE RCP+ V D+ ++ L
Sbjct: 119 ----QGSKQIQLCRDALAG--RATLFTDELRCPIDVTDLAAAVVELVG------SDYAGT 166
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
LNV GP+ VSR ++ +VA +G S +K + ++V+ G+ P I +D
Sbjct: 167 LNVAGPEAVSRAELGRLVAHHQGLDASALK--TTTTVEYGLVRPTTIRLD 214
>gi|344202675|ref|YP_004787818.1| dTDP-4-dehydrorhamnose reductase [Muricauda ruestringensis DSM
13258]
gi|343954597|gb|AEM70396.1| dTDP-4-dehydrorhamnose reductase [Muricauda ruestringensis DSM
13258]
Length = 258
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 25/195 (12%)
Query: 45 LLLDALPHSF--VFFDVDLKSGSGFDAV-------ALKFGQPDVVVNCAALSVPRVCEND 95
L L H F VFFD K+ + D A + Q D +NCAA + E
Sbjct: 15 LTLQEQSHDFPEVFFD--FKASAALDITQPAQLVDAFQKRQYDFCINCAAYTHVEDAEKH 72
Query: 96 PDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKS 154
P+ A S+N V L+ + LIH+STD V++G K Y D+ P+N YG+S
Sbjct: 73 PEKAFSVNAEG--VKNLAEVCRDHTTTLIHISTDYVFDGEKEDPYTVNDKTNPINEYGRS 130
Query: 155 KVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK---GEKVEFFHDE 211
K+ E+FI E N I+RSS +Y K + ++L K GE + + +
Sbjct: 131 KLRGERFIQEILPNHYIIRSSWLYS--------KKFGHNFYRTILKKALAGEDLYITNAQ 182
Query: 212 CRCPVYVRDVVKIIL 226
CP + + IL
Sbjct: 183 KGCPTDTETLAEFIL 197
>gi|375137633|ref|YP_004998282.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae NBB3]
gi|359818254|gb|AEV71067.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae NBB3]
Length = 293
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 30/257 (11%)
Query: 70 VALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHL 126
A +F +P DVV+NCAA + E+D + A ++N P+++ + IH+
Sbjct: 48 AAERFVEPGDVVINCAAYTAVDAAESDEERAHAVNAVGPANIAQACARAGAE----FIHI 103
Query: 127 STDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY----GPQ 181
STD V+ G K ++ DE AP VYG++K+A E + + I+R++ IY G
Sbjct: 104 STDYVFSGPKGTPFEINDETAPAGVYGRTKLAGEFAVLTAMPDAHIVRTAWIYEGADGSD 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEK-VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ + + L+ G+K V D+ P Y D+V +L + + + E
Sbjct: 164 FVAVMKR----------LAAGDKTVNVVDDQIGSPTYAADLVGALLEVADGGIREP---- 209
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
+L+ SR + A+ V E G + ++PVS R P + S+ ++L
Sbjct: 210 -VLHATNAGEASRFEQAQAVFEAVGADPARVRPVSTDQYPRPAPRP-EYSVLSSRLSAEA 267
Query: 301 NIDPVT-YKDGVKLTLA 316
+ P+ ++D + +A
Sbjct: 268 GLTPLRPWRDALAAAIA 284
>gi|12232610|gb|AAG49405.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans]
Length = 292
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 136/314 (43%), Gaps = 37/314 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++G+ +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGYCLTQ---QLQGR-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F PDVV+N AA + E + + + +INV +L+ ++ + ++
Sbjct: 41 SAVKKTVENFC-PDVVINAAAHTAVDRAETEVERSEAINVKGP--QYLAETAKSVDAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G + YKE D P +YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRSAGKYKETDAADPQGIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGN 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ + +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGESVEYGIY 211
Query: 244 NVGGPDRVS-----RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS R E V++ L+ ++ + + PA+ +D+TK+ Q
Sbjct: 212 HFTGLPYVSWCDFARAIFDEAVSQNMLEKAPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 299 TLNIDPVTYKDGVK 312
I P ++ +K
Sbjct: 272 AFGIQPSDWQRALK 285
>gi|115374682|ref|ZP_01461960.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
gi|310820809|ref|YP_003953167.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
gi|115368350|gb|EAU67307.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
gi|309393881|gb|ADO71340.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
Length = 303
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 52 HSFVFFDVDLKSGSGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVN 110
H ++ D+ L++ D + A++ P+ +++ A+++ CE P+ A + NV +++
Sbjct: 41 HRYIPVDLTLEA----DVLTAIESAAPEAIIHPASMTEVDACERAPELAYAANVTAAMA- 95
Query: 111 WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
++ L+H+STD V++G + Y EE P VY +K E+ A
Sbjct: 96 -VAKGARKVGAHLVHVSTDYVFDGDQGPYDEEARANPRGVYALTKHMGEQAAKSFVPGCA 154
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
I R++++YG P + W+ L K + V+ F D+ P V +++ L
Sbjct: 155 IARTAVVYG---WPPAGRPNFGAWLVGALEKQQTVKLFEDQFVSPSLADSVAAMLVELGE 211
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
R L L N G + ++RV + E+ G+ +L+ P
Sbjct: 212 RKLGG------LWNTCGGEVMNRVSFGRALCEVFGFDQNLLVP 248
>gi|117924362|ref|YP_864979.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus marinus MC-1]
gi|117608118|gb|ABK43573.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus marinus MC-1]
Length = 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 137/325 (42%), Gaps = 39/325 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ R L++G +G++GQHLL+ L P T+ TP + FD
Sbjct: 1 MAMARFLIIGASGFIGQHLLRQLG-----PEQCLGTYAHTPF---------DGGIHFDPT 46
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L F + +G + + A+S C NDP + +INV +S ++ + + +
Sbjct: 47 LIDPDQFLDL---YGHVEQIYLLMAVSSLITCANDPQGSYAINVEASKA--IALWCKKHQ 101
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYG 179
L+ S+D V+ G + Y E+ P+ YGK K E F+ + +R S Y
Sbjct: 102 IPLLFTSSDAVFGGQQGLYDEQHIPTPLVTYGKQKREVEVFLQAHLPHLHTTVRLSKTY- 160
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +P K+L W+ + + + + D+ P++V D V + L Q
Sbjct: 161 --SSNPQDKTLLSAWVRA-WQQQQPIMCATDQRFNPIHVEDAVVGMQQLMA------GQH 211
Query: 240 QLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-------IKPVSASSVDRGVQSPADISMD 292
+ L ++ GP V R Q+ + E Y L +K + + P DIS
Sbjct: 212 RGLYHLCGPTPVDRYQLLLDLQEC--YEQQLGPLPSWQVKACLINELGLAETWPIDISTR 269
Query: 293 ITKLVQTLNIDPVTYKDGVKLTLAA 317
I KL+ T+ + P T + G + + A
Sbjct: 270 IDKLLATIPLHPRTPQQGCQQLIQA 294
>gi|319791461|ref|YP_004153101.1| dtdp-4-dehydrorhamnose reductase [Variovorax paradoxus EPS]
gi|315593924|gb|ADU34990.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus EPS]
Length = 296
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 34/318 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++PD A +N S V ++ + L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPDFARKLNATSPGV--VAEAAQQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G S +KE+D P+++YG +K+ E+ + + C+ I R+S +Y +
Sbjct: 101 HYSTDYVFDGSGSKPWKEDDATGPLSIYGSTKLEGEQLVAKHCARHLIFRTSWVYAARGG 160
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ L I + +K+ D+ P + I L + + L
Sbjct: 161 NFAKTMLRIA------KERDKLTVIDDQFGAPTGAELLADITAHAIRATLQDPSKAGLYH 214
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSL------IKPVSASSVDRGVQSPADISMDITKLV 297
V G V+ + + L ++PV ++ + P + +D TKL
Sbjct: 215 AVAGGVTTWHGYARFVIEQAKAAGVELKAGPEAVEPVPTTAFPTPAKRPHNSRLDTTKLQ 274
Query: 298 QTLNIDPVTYKDGVKLTL 315
T + ++ GV L
Sbjct: 275 STFGLVLPEWQSGVARML 292
>gi|212555947|gb|ACJ28401.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3]
Length = 370
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 23/238 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP------------H 52
+++V GG G L Q L + K + T + + Q L++ LP H
Sbjct: 6 KIMVTGGNGQLAQSLALIAHLSDAKVKASSFTRITADIVQALVNILPEVRNSLSEQDELH 65
Query: 53 SFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
+D+ + D ++ PDVV+NCAA + E D +SA +N + L
Sbjct: 66 LLSHRKLDICDSAAIDDAFMRVN-PDVVINCAAFNAVDNAETDSESAFKVNFEGPKL--L 122
Query: 113 SSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
+ + +LIH+S+D V+ G K S Y E+D P++VYGKSK+A E+ + + ++ A
Sbjct: 123 AERCKRDGVMLIHISSDFVFAGEKHSPYNEQDLPEPLSVYGKSKLAGEQAVRQVIASKAY 182
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+R+S +Y Q + V + + + E+V D+ P + + II L
Sbjct: 183 IIRTSWLYSCQGNNFVHT------MQKLFAAKEQVSVIADQYGSPTWSEALAVIIFKL 234
>gi|218245359|ref|YP_002370730.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
gi|218165837|gb|ACK64574.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
Length = 296
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P++++N AA + E +P+ A+++N + + ++ L+H+STD V++G
Sbjct: 52 HPNIIINGAAYTAVDQAEKEPELALAVNGIAPTI--IAEEAHKLGAFLLHISTDYVFDGT 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y EED P++VYG+SK+A E+ I + + ILR++ +YG S +
Sbjct: 110 KNIPYTEEDPTHPLSVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKS--------NF 161
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++L G E++ D+ P + +D+ + I L
Sbjct: 162 VKTMLRLGQEREQIRVVSDQIGSPTWAQDIAQTINQL 198
>gi|416409480|ref|ZP_11688470.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
gi|357260611|gb|EHJ10001.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
Length = 294
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G +G+ L Q L + ++ AT+ +DL S
Sbjct: 2 KKILLTGSDGQVGRDLQQTLVPMG----EIIATNRQ------------------QLDLTS 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V ++ +PD++VN AA + E++ D A +IN + + ++ + L
Sbjct: 40 PDNIRQV-IQETKPDIIVNSAAYTAVDKAESEVDLAFAINGIAPAI--MAEEAKKIGAFL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G K+ Y E D P+ VYG+SK+A E+ I + + ILR++ +YG Q
Sbjct: 97 LHISTDYVFDGTKNTPYLETDVTHPLGVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTQG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQMQL 241
K++ D E++ D+ P + D+ + I LTN L+E ++
Sbjct: 157 KGNFVKTMLRLGKDK-----EQLGIVSDQVGSPTWSYDIAQTITQILTNLNLAEARETYH 211
Query: 242 LLNVG 246
N G
Sbjct: 212 FTNSG 216
>gi|167753451|ref|ZP_02425578.1| hypothetical protein ALIPUT_01725 [Alistipes putredinis DSM 17216]
gi|167658076|gb|EDS02206.1| dTDP-4-dehydrorhamnose reductase [Alistipes putredinis DSM 17216]
Length = 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
D +VNCAA + E + ++A IN V L+ + L H+STD V+ G+ +
Sbjct: 54 DAIVNCAAYTNVDKAEEEAETADRIN--HEAVRNLAEAAKACGATLFHISTDYVFGGMGN 111
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
++EED AP+ VYGK+K+A E+ I + R++ +Y P + + L +
Sbjct: 112 IPFREEDPTAPLGVYGKTKLAGEEAIVASGCKHLVFRTAWLYSPYGRNFLKTMLQLT--- 168
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQLLLNVGGPDRVSRVQ 255
+ +++ D+ P V D+ +I +R S D + + S
Sbjct: 169 ---ADKPELQVVFDQVGTPTCVADLACVIF---DRIESGDYAGREGFYHFSNEGVCSWFD 222
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTL 315
A +A + G+++ I+P ++ VQ P +D TK+ T ID ++D + +
Sbjct: 223 FAHEIAALAGHTSCKIRPCHSAEFPSKVQRPNYSVLDKTKIKTTFGIDIPHWRDSLVRCM 282
Query: 316 A 316
A
Sbjct: 283 A 283
>gi|78186306|ref|YP_374349.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273]
gi|78166208|gb|ABB23306.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273]
Length = 288
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---VDLK 62
+LV GG G LG L Q L + G H F+F D +D+
Sbjct: 3 ILVAGGRGQLGSEL-QALRKGAGA----------------------HRFLFLDRPDLDIT 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+F QPDVVVN AA + E D ++A +N + V L+ + +
Sbjct: 40 DSGSVRGAFDRF-QPDVVVNAAAYTAVDRAEEDREAAFLVNRDGAGV--LAGCSRDAGAF 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IH+STD V++G S Y+EED P VYG+SK E+ + + AI+R+S +Y
Sbjct: 97 FIHVSTDYVFDGTASRPYREEDMPCPEGVYGRSKFEGERLVASVDPSHAIIRTSWLYSAY 156
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + + E + D+ P + D+ +L + R
Sbjct: 157 GQNFVKTMLRLG------RERESLGVVFDQTGTPTHAADLASAVLHIALR 200
>gi|225568040|ref|ZP_03777065.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM
15053]
gi|225163136|gb|EEG75755.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM
15053]
Length = 286
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG+ PDV++NCAA++ +CE P+ A +N + LS ++ LST
Sbjct: 45 ISFGEINRPDVIINCAAVTDTALCEEQPELAYRVNALGARN--LSIVARKTGAKIVQLST 102
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ + Y E D+ P VYG+SK A E ++ E I+RS+ +YG
Sbjct: 103 DDVFDGLSTTPYSEFDDTNPRTVYGRSKRAGENYVKEFTHKHFIVRSNWVYGKGD----- 157
Query: 188 KSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL--TNRWLSEDKQMQLL 242
+++SVL K +++ D+ P RD+ ++IL L TN + + +
Sbjct: 158 -----NFVNSVLEKAGSQKQLSVAADQFGSPTSARDLGRLILYLIGTNEYGTYHATCK-- 210
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
SR + AE + ++ + L KPV A + PA +D
Sbjct: 211 ------GTCSRYEFAEEILKLADRNIEL-KPVPARESELASVRPAYAVLD 253
>gi|409418099|ref|ZP_11258109.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. HYS]
Length = 286
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+PD+++N AA + E++P+ A +IN + + F E L LIH STD V+
Sbjct: 50 KPDLIINAAAHTAVDKAESEPELAFAINARAPGI-----FAEEAAKLGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K S Y E+DE P+ VYG+SK+A E+ I ILR+S +Y + + L
Sbjct: 105 DGSKDSPYTEDDEPNPLGVYGRSKLAGEQAIAAVGGQHLILRTSWVYSRHGSNFL---LT 161
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+Q +L + ++ D+ P + + AL RW + ++
Sbjct: 162 MQ---RLLQEKPELRIVADQIGAPTWAGTIAISTRALIERWQAGQAGAWGTYHLTAQGET 218
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ + E +G + + P+ +S + P + +D ++L + + ++
Sbjct: 219 SWFGFAQAIGEQLKAQGLPCAELLPIPSSDYPTPARRPLNSRLDCSRLQREWQVSQPHWQ 278
Query: 309 DGV 311
+
Sbjct: 279 QAL 281
>gi|238763334|ref|ZP_04624298.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC
33638]
gi|238698433|gb|EEP91186.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC
33638]
Length = 293
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 33/310 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
VL++G TG LG L L+E K +V T S ++ + L + + +VD
Sbjct: 2 NVLILGATGMLGYSLFANLNEY--KQLNVIGTARSMAGKEIYFNKLQENLLL-NVDATDI 58
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
D A+K +PDVV+NC L A+ IN S L + L++ + E I
Sbjct: 59 DSIDN-AIKLAKPDVVINCIGLIKQHEIAKQYVPAIKIN--SLLPHQLAALCDKYEAKYI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V++G Y E D ++YGKSK E LR+SII G + S
Sbjct: 116 HFSTDCVFDGKTGLYNELDLPNSTDIYGKSKYLGE----VNYGRHLTLRTSII-GHELSS 170
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL-L 243
V ID L + +V F + + K+ L + L ++ L L
Sbjct: 171 AV------SLIDWFLKQQNEVNGFSKAIFSGLPTSYIAKL---LAEKILVDNSLTGLYHL 221
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+V D + + + +V+EI G+S +++ Q D S+D KL +N +
Sbjct: 222 SV---DPIDKFSLISLVSEIYGHSV---------KINKSEQLVIDRSLDSKKLRDAINFN 269
Query: 304 PVTYKDGVKL 313
P T+++ ++
Sbjct: 270 PPTWRELIEF 279
>gi|88604301|ref|YP_504479.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1]
gi|88189763|gb|ABD42760.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1]
Length = 282
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL-LIHLSTDQVY 132
QPD+++NCAA + + E + + A +N P +L S NK N L+H STD ++
Sbjct: 51 QPDIIINCAAYNAVDLAETEYEKAFLVNGIGPKNL-----SLAANKVNASLVHYSTDYIF 105
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
G S Y D P++ YG+SK+ E+ + + + ++R S ++G I+ V K L
Sbjct: 106 NGKSSRPYTIADHPDPLSRYGESKLLGEQEVMRHATRYYLIRVSWVFGSGNINFVKKVL- 164
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+W D K + D+ P Y D+ K L L ++ + N G
Sbjct: 165 -EWSD----KSNIITVVDDQIASPTYTHDLAKATLDLIQ---TDQYGLYHCTNTG---HC 213
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
SR A + + G+S LI P ++ + P ++D L Q + + +++D
Sbjct: 214 SRFDFAAYILQQVGWSGELI-PGKSTEFETPATRPEFSALDNFGLKQVIGYNLPSWQDAT 272
Query: 312 KLTL 315
+ L
Sbjct: 273 ERFL 276
>gi|410087606|ref|ZP_11284309.1| dTDP-4-dehydrorhamnose reductase [Morganella morganii SC01]
gi|409766050|gb|EKN50148.1| dTDP-4-dehydrorhamnose reductase [Morganella morganii SC01]
Length = 299
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD++VN AA + E D ++A +IN S V L+ + + LIH STD V+ G
Sbjct: 54 QPDIIVNAAAYTAVDNAEKDQENAYTIN--SDSVRILAKIAKKHDIWLIHYSTDYVFNGN 111
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+++KE D+ AP+N+YG SK+ E I E C + I R+S +Y +
Sbjct: 112 GNNYWKENDKPAPLNIYGLSKLKGEYAIIENCHKYIIFRTSWVYAAK 158
>gi|395323271|gb|EJF55751.1| NAD(P)-binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 301
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 26/290 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G +G LG + + V HS P +L +DL
Sbjct: 3 RVIVTGASGVLGSAVYAAFKSAG---HTVLGLAHSRPTDELK-----------KLDLLDE 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
++ +F +PD V++CAA P V E DP++A INV S+ L++ ++ + L+
Sbjct: 49 DATESYFAEF-KPDWVIHCAAERRPDVAEKDPEAARKINV--SVPEHLANLSKKLKFKLV 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTI 183
++STD V++G Y P+N+YG +K E + S +LR ++YGP
Sbjct: 106 YISTDYVFDGTSPPYPPSAPTNPLNLYGTTKRDGELAVLGVSGSQSIVLRVPVLYGP--- 162
Query: 184 SPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P + + +V++ G++ + H R P V D+ + L N + + +
Sbjct: 163 APNNTDSAVNILLNVVADRSGKQYKMDHYATRFPTNVLDIADFLARLIN--VPPTRAIPP 220
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISM 291
+L+ + ++ +M + A+I G I P + D G P + +
Sbjct: 221 ILHYSAAEPFTKYEMCLIFAKILGVPHGHIIPDAEPPKD-GTPRPQNTQL 269
>gi|224369262|ref|YP_002603426.1| protein RfbD [Desulfobacterium autotrophicum HRM2]
gi|223691979|gb|ACN15262.1| RfbD [Desulfobacterium autotrophicum HRM2]
Length = 291
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GGTG LGQ + V +HS SF D+D+
Sbjct: 2 RILICGGTGQLGQDCTR-----------VFNKNHSV-----------QSFGSRDLDISDP 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + P+VV+NCAA + CE++ D A +N + L+ + L++
Sbjct: 40 DLVERTIRELA-PEVVINCAAYTNVDGCEDNRDHAFHVNAVGA--ENLARSCRTVDALMV 96
Query: 125 HLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H+STD V++G K Y E D AP+NVYG SK+ EK + I+R++ +YG Q
Sbjct: 97 HISTDYVFDGKKEPPLTYAETDPTAPLNVYGASKLEGEKRVAALLEKQIIVRTAWLYGAQ 156
>gi|329939350|ref|ZP_08288686.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces
griseoaurantiacus M045]
gi|329301579|gb|EGG45473.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces
griseoaurantiacus M045]
Length = 296
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG- 134
+PDV V+C A CE DPD A ++NV ++ ++ + L++LST+ V++G
Sbjct: 59 RPDVCVHCVAAPDVAACERDPDMAHALNVRTT--ENVARACARQAVRLVYLSTEFVFDGK 116
Query: 135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
++ Y E+D P+ +YG++K+ E+ E + I+R ++YG +PVP W
Sbjct: 117 SETGYAEDDVPHPLQMYGRTKLLGEERASEVPEHL-IVRLPVLYG----APVP-GRGRGW 170
Query: 195 IDSV---LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
I+ + LS+G VE R P + DV ++ R + +L+ +R+
Sbjct: 171 IERMLLALSEGRTVELDDRVERQPTWTEDVAAVLEEAVAR------RETGVLHAASRERL 224
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+++ +AE G +L++P A + V PA + +L Q
Sbjct: 225 TKLAWGRKLAEAAGLPGTLLRPARAVPEGQEVPRPARPWLLTDRLEQ 271
>gi|160935033|ref|ZP_02082419.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753]
gi|156866486|gb|EDO59858.1| dTDP-4-dehydrorhamnose reductase [Clostridium leptum DSM 753]
Length = 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G G LG L + ++E + + ++ H L + ++ D+D+
Sbjct: 3 VLVTGCKGQLGNELYKIITEKKSELGEIPQCFHDCKLTCIDVE---------DLDITDLE 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
A +P+VV+NCAA + CE+D D+A +N P +L + E L
Sbjct: 54 AVQAYTRTL-RPEVVINCAAYTNVNGCESDRDAAFRVNALGPRNL----AVACEETGAKL 108
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V+ G + Y E D P +VYG++K E+++ + CS + I+R++ +YG
Sbjct: 109 VHVSTDYVFPGDGTEPYVEWDLCGPQSVYGRTKYLGEQYVRDFCSRYFIVRTAWLYG 165
>gi|376004466|ref|ZP_09782162.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Arthrospira sp. PCC 8005]
gi|375327155|emb|CCE17915.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Arthrospira sp. PCC 8005]
Length = 292
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP++VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 QPNIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG---VT 216
Query: 252 SRVQMAEVV---AEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
S A + A++ G + + P++ + + PA ++ KL L P
Sbjct: 217 SWYDFAIAIFEEAKLLGLPLKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQ 276
Query: 307 YKDGVKLTL 315
++ G++ L
Sbjct: 277 WRSGLRTML 285
>gi|218680959|ref|ZP_03528856.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 894]
Length = 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAKAAARIGVP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y E+D AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKTSAYSEKDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ ++ +
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGIF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ A + G + I+ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAALLKSGGRSVRIERIPTADYPTPAKRPANSRLNGEKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKKSMTVVM 287
>gi|404497328|ref|YP_006721434.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15]
gi|418065780|ref|ZP_12703150.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens RCH3]
gi|78194930|gb|ABB32697.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15]
gi|373561578|gb|EHP87809.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens RCH3]
Length = 280
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LVVG G LGQ L++ L P DV ++D+ S
Sbjct: 2 ILVVGAKGMLGQDLMRVL------PGDVRGVD------------------IEEIDITSPE 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
V L +P VVVNCAA + CE + D AM +N V L++ T LL+
Sbjct: 38 SVRRVLLTL-KPRVVVNCAAYTDVDGCETNVDLAMRVN--GDGVGHLAAATREIGALLVQ 94
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V++G K Y E+D + P++VYGKSK+ EK E + I+R+ +YG
Sbjct: 95 VSTDYVFDGTKGTPYVEDDRVNPLSVYGKSKLVGEKKARENPDHL-IVRTQWLYG 148
>gi|421486023|ref|ZP_15933575.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
gi|400195804|gb|EJO28788.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
Length = 302
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 46/328 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G LG L + L+ + +VAA S + DL
Sbjct: 3 KKILVLGRDGQLGFELRRSLAPLG----NVAAVGRS------------------ECDLTY 40
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V ++ +PDV+VN AAL+ E D AM IN ++ ++ ++ L+
Sbjct: 41 PLQLARV-VRREKPDVIVNAAALTSVERAEEDVVRAMRINAEAAGEL--AALAASRGALI 97
Query: 124 IHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H S+D V++G K Y E D AP+N YG+SK+A E+ + + + R+S IYG
Sbjct: 98 VHYSSDYVFDGEKQDPYVETDVPAPLNAYGRSKLAGERAVQAMNAEHLVFRTSWIYG--- 154
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP---VYVRDVVKIILALTNRWLSEDKQM 239
V + ++ + L + E + D+ P ++ DV + +A R+L +
Sbjct: 155 ---VFGNSFLKSMLMALRQPEPLRVVSDQRGAPTGAAFIADVTALAVA---RYLGGEAGF 208
Query: 240 QL-LLNVGGPDRVSRVQMAEVVAE---IRGYSTSL----IKPVSASSVDRGVQSPADISM 291
L ++ +V+ A VAE + G +L I+PV +S + P + +
Sbjct: 209 PFGLYHLAAAGQVTWHDYACYVAEQARMAGLPVTLVPADIQPVPSSQSPSTPRRPLNSCL 268
Query: 292 DITKLVQTLNIDPVTYKDGVKLTLAAEA 319
D L Q I +++GV+ LAA A
Sbjct: 269 DTRLLTQQFGIHAPPWQEGVRHALAAMA 296
>gi|189460858|ref|ZP_03009643.1| hypothetical protein BACCOP_01505 [Bacteroides coprocola DSM 17136]
gi|189432432|gb|EDV01417.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprocola DSM 17136]
Length = 286
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 20/241 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
Q D++VNCAA + E+D + +N + +L+ +++ L+ +STD V++G
Sbjct: 53 QIDIIVNCAAYTAVDKAEDDRELCDKLNHFAP--GYLAKAIQSRGGYLVQVSTDYVFDGT 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
YKEE P +VYG +K+A E+ + CSN I+R++ +Y + +
Sbjct: 111 AHIPYKEEQATCPDSVYGTTKLAGEQEAMKYCSNTMIIRTAWLY---------STFGNNF 161
Query: 195 IDSVLSKGEKVE---FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ +++ G++ E D+ P Y RD+ I A N+ + + + +
Sbjct: 162 VKTMIRLGKEKEALGVIFDQIGTPTYARDLAVAIFAAINKGI-----VPGIYHYSNEGVC 216
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
S +++ + G T ++P+ P +D TK+ +T I+ + D +
Sbjct: 217 SWYDFTQMIHHLAGIGTCKLRPLHTEEYPTKANRPHYSVLDKTKIKETYGIEIPYWVDSL 276
Query: 312 K 312
K
Sbjct: 277 K 277
>gi|197294957|ref|YP_002153498.1| hypothetical protein BCAS0105 [Burkholderia cenocepacia J2315]
gi|444360774|ref|ZP_21161950.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
BC7]
gi|444366991|ref|ZP_21166988.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|195944436|emb|CAR57038.1| putative exported protein [Burkholderia cenocepacia J2315]
gi|443599391|gb|ELT67677.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
BC7]
gi|443603583|gb|ELT71576.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
Length = 321
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 39/319 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEG--------KPYDVAATHHSTPLPQLLLDALPHSFVFF 57
+L+VG +G LG+ + LS P A + P P +
Sbjct: 13 ILLVGASGLLGRAVAASLSREPSLTLLATIRNPQGAGAKRLALP---------PDNIAEL 63
Query: 58 DVDLKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
DV D+ +L+ +P V+ CAA P VCE DP +A +INV + +
Sbjct: 64 DV-------LDSPSLERLFEIHKPAAVILCAAERRPDVCERDPAAARAINV--TAPARIG 114
Query: 114 SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ + +STD V++G + Y E+ P+N+YG++K+ E + +LR
Sbjct: 115 ALAARYGAWTLGISTDYVFDGKAAPYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLR 174
Query: 174 SSIIYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+++GP + S V +P + S + V R P Y DV ++I LT
Sbjct: 175 LPLLFGPIVDWSESAVTSLVPAV-VASARPGADAVGMDAWAIRYPTYTPDVAQVIRDLTL 233
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
R L+ D + + + + +++ +A+ +A G SL P++ + P D
Sbjct: 234 RHLAGD-TVTGIRHWSSEEPMTKYAIAQRIAAALGIEASL-TPITQPT--DATPRPYDCH 289
Query: 291 MDITKLVQTLNIDPVTYKD 309
+D T+ V+ L ID T D
Sbjct: 290 LDATR-VRALGIDYATPFD 307
>gi|222053767|ref|YP_002536129.1| dTDP-4-dehydrorhamnose reductase [Geobacter daltonii FRC-32]
gi|221563056|gb|ACM19028.1| dTDP-4-dehydrorhamnose reductase [Geobacter daltonii FRC-32]
Length = 291
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P++V+N AA + CE DP A+ +N + L+ + ++ LL+H+S+D V+ G
Sbjct: 55 KPELVINAAAFNGVDACEKDPHQALLVN--TLFPRLLAELSASQGFLLVHISSDAVFSGT 112
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E +P+N+YG +K A+ FI + I R S+ +G T SP Q+
Sbjct: 113 GRETYAESSAASPINLYGFTKYGADCFITAIAHRYYIARISVQFGITTGSP-------QF 165
Query: 195 IDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
++ +L + E + +D P Y +DV I R L E+K+ L ++
Sbjct: 166 VEKMLERMQRSTEPLRISNDIVASPSYSQDVATAI-----RGLVEEKRPFGLYHLVNEGE 220
Query: 251 VSRVQMAEVVAEIRGYSTSLIKPVS 275
S ++ + + I G + +KPVS
Sbjct: 221 ASLWELIQELDRIMGLKAA-VKPVS 244
>gi|345303521|ref|YP_004825423.1| UDP-glucose 4-epimerase [Rhodothermus marinus SG0.5JP17-172]
gi|345112754|gb|AEN73586.1| UDP-glucose 4-epimerase [Rhodothermus marinus SG0.5JP17-172]
Length = 313
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 27/327 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +RVLV GG G++G+ ++ E + Y VA + T L A F+ D
Sbjct: 1 MTIRRVLVTGGAGFIGRWVVARCLE---QGYQVAVYDNLTAGSVDHLLAFSDRIDFYKAD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + AV ++ +P++V + AAL C P + +NV + N L +
Sbjct: 58 ILDTATLQAV-MEETRPEIVFHLAALHFIPYCNAHPQETLRVNVEGTY-NVLEAAARVGV 115
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNFAILRSSII- 177
+ S+ +Y V+ E APV+VYG SK+ E+ + + + A + + +
Sbjct: 116 RTAVVASSGAIYPSVEGLIPETLAPAPVDVYGLSKLLTEQVAAQFARTTKMACVAARLFN 175
Query: 178 -YGPQTISPVPKSLPIQWIDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILALTNRWLS 234
YGP +P I I + L +G V H + R +YV DV ++++AL R ++
Sbjct: 176 TYGPYETNP----HLIPHIIASLQQGPVVALGNIHTK-RDYIYVEDVARLLVALGER-VT 229
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-IKPVSASSVDRGVQSPADISMDI 293
E ++ +NVG S ++ E ++E+ G + I P VD+ Q D
Sbjct: 230 EGYEV---VNVGTGQEFSAQEIIETLSELMGQPIEIRIDPERVRPVDKLHQ-----QADT 281
Query: 294 TKLVQTLNIDP-VTYKDGVKLTLAAEA 319
T+L Q + P VT ++G+ L E
Sbjct: 282 TRLQQLTGMLPEVTLREGLARLLQHEG 308
>gi|229578479|ref|YP_002836877.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14]
gi|228009193|gb|ACP44955.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14]
Length = 274
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G +G LG L + L K Y+ + +DL +
Sbjct: 2 RILITGASGQLGFELSEVLKGDIVKVYNTKEVQGG-----------------YKLDLTNY 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +K +PDV++N A+L+ CE + A +N + V + + E LI
Sbjct: 45 SAVEDFIIK-KRPDVIINTASLTDVDKCEVERSLAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG +K+ E + + I S +
Sbjct: 102 HISTDYVFDGKKGLYKEEDLPNPINYYGLTKLLGETYALSYDDSLVIRTSGVFR------ 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L + + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------EYRKTGILN 205
Query: 245 VGGPDRVSRVQMAEVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
V +RVSRV +A + E G S + V R P D S+DI+K + L+
Sbjct: 206 V-ASERVSRVDLAMKIKEKFNLGGSVKEVDEVKGWIAKR----PFDSSLDISKAKKLLST 260
Query: 303 D 303
D
Sbjct: 261 D 261
>gi|434399229|ref|YP_007133233.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
gi|428270326|gb|AFZ36267.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
Length = 297
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 14/247 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++VN AA + E + A IN + ++ E L+H+STD V++G
Sbjct: 51 KPSIIVNAAAYTAVDQAETEVKLANKINAIAPTA--MAEVAEKIGATLVHISTDYVFDGC 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
Y+EED+ P+ VYGKSK+ E+ I CS + ILR++ +YG + K++
Sbjct: 109 NHTPYQEEDDTNPIGVYGKSKLLGEEGIINNCSRYLILRTAWVYGCRGHGNFVKTML--- 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL----LLNVGGPDR 250
+ ++ E++ D+ P + D+ I + R ++ + + N G
Sbjct: 166 --RLGAEREEIRVVADQIGSPTWSYDIAVTITQMLAREIAGNSVLPTGIYHFTNSGVASW 223
Query: 251 VSRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
A+ G+S + I P+S + Q PA ++ TK+ + L + P ++
Sbjct: 224 YDFAVAIFAEAQQLGFSLKVKQIVPISTAEYPTPAQRPAYSVLNKTKITKALGVYPPYWR 283
Query: 309 DGVKLTL 315
++ L
Sbjct: 284 QSLQKML 290
>gi|392550534|ref|ZP_10297671.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas spongiae
UST010723-006]
Length = 294
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLK 62
K+VL+ G TG LG+ L++ +E +DV T S P + LD H V
Sbjct: 2 KKVLITGATGLLGRALVRIFNE---NGFDVIGTGFSRAQSPIVKLDLTQHITV------- 51
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F L +PD++++ AA P VCEN+ ++N+ S+ LS
Sbjct: 52 --TQF----LDETKPDIIIHAAAERKPDVCENNHAHTKALNL--SVTEHLSREAARLNAQ 103
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V++G Y E D + P+N YG++K E+ + C ++R ++YG
Sbjct: 104 FFFISTDYVFDGKTPPYSESDTLNPLNFYGETKAQGEQIVLNTCKTHTVIRVPVLYG 160
>gi|340959839|gb|EGS21020.1| dtdp-4-dehydrorhamnose reductase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 322
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 33/316 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K L+ G TG LG+ +++ + G+ + V T S + +L VDL
Sbjct: 5 KTALITGATGLLGRQVVKTFA---GRGWSVKGTGFSRADGKEILK----------VDLAD 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ L V+ AA P + DPD+A INV ++ L+S + L
Sbjct: 52 PEHVENT-LDEVNVGVMEWGAANRFPDKVDKDPDAARKINVEATRA--LASACAQRSVFL 108
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFI---YE---KCSNFAILRSS 175
I++STD V+ G + Y+ + E AP N+YG +K+ EK + YE K + +LR
Sbjct: 109 IYISTDYVFPGKPGDAPYEADAEPAPTNLYGLTKLDGEKAVLAEYEAAGKVGSAVVLRVP 168
Query: 176 IIYGP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
++YG +L ++S +KV+ H R P DV ++ +
Sbjct: 169 VLYGQVSKEGGNAESAVNTLMDVVVNSAKEGAKKVKMDHWAVRYPTNTEDVARVCYDVAV 228
Query: 231 RWLSEDKQMQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP-VSASSVDRGVQSPA 287
R++ + L +L D+ ++ +M ++ AEI G I+ + + VQ P
Sbjct: 229 RYIESGAKQSLPRILQFSSEDKYTKYEMCQLFAEIMGLPIDNIEANTEGNDPNATVQRPY 288
Query: 288 DISMDITKLVQTLNID 303
D + T+ +Q L ID
Sbjct: 289 DCHLS-TRALQELGID 303
>gi|297526884|ref|YP_003668908.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM
12710]
gi|297255800|gb|ADI32009.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM
12710]
Length = 284
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 42/286 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V+G +G LG ++ L + DA+P DVD+
Sbjct: 2 RVAVIGASGQLGSDIVFVLGD----------------------DAIP--LTHQDVDVTDA 37
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D + + +PDV+VN AA CE +P ++N +L ++ + + I
Sbjct: 38 SSLDVI--RDLKPDVIVNTAAYHKVDECELNPLKTFNVNSVGALN--VAKIANEVDAINI 93
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y E+D+ PVNVYG SK E + I+R + ++G +
Sbjct: 94 YISTDFVFDGKKGRPYNEDDQPNPVNVYGLSKYIGEIVTRNYSRKYYIIRLASLFGVKG- 152
Query: 184 SPVPKSLPIQWIDSVLSK---GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ +ID + K GE + D P Y +DV +++ L L + +
Sbjct: 153 ---ARGKGGNFIDKITEKARRGEPIRVVDDMIMSPTYTKDVARMLKKLLE--LRPEYGVY 207
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
++N G S ++A+ V EI G+ IKP+ ++ + P
Sbjct: 208 HMVNEG---YCSWYELAKTVFEIIGWDAD-IKPIKTRDLNLVARRP 249
>gi|212225002|ref|YP_002308238.1| dTDP-4-dehydrorhamnose reductase [Thermococcus onnurineus NA1]
gi|212009959|gb|ACJ17341.1| hypothetical dTDP-4-dehydrorhamnose reductase [Thermococcus
onnurineus NA1]
Length = 288
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 34/284 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-ALPHSFVFFDVDLKS 63
RV ++G +G LG L++ E + PL LD +P +
Sbjct: 2 RVAIIGASGQLGTDLVKVFGE--------DPSFEVIPLTHRDLDVTVPETLR-------- 45
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
LK +PDV++N AA E P+ A ++N +L ++ + +
Sbjct: 46 -------VLKELKPDVIINTAAYVRVDDAEIYPEKAFAVNTIGALN--VARVASEIDAIN 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y E+D P+NVYG SK A E F + I+R + +YG
Sbjct: 97 VYISTDYVFDGEKGEPYTEDDVPNPINVYGASKYAGEIFTRNYSRKYYIIRVASLYGKAG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S + + W+ +GE++ D+ P Y DV + + + + + +
Sbjct: 157 ASGKGGNF-VNWVIEKAKRGEELRIVDDQFMSPTYTMDVARTLREFLE--IGPEWGVYHM 213
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
+N G S + + EI G+ +KP+ +S ++R + P
Sbjct: 214 VNEG---YCSWYEFTRAIFEILGWDVE-VKPIKSSELNRLARRP 253
>gi|436842046|ref|YP_007326424.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432170952|emb|CCO24323.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 294
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 1 MSKKRVLVVGG-TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
++ K+ +++GG TG LG+ L + L E +D+ + PL + D L +
Sbjct: 4 LAGKKAIILGGRTGLLGRTLTEKLQE-----HDIV----TIPLSRNDFDPLNEESL---- 50
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ L+ +PD++ N A + E++ + A +N ++ L+ +++
Sbjct: 51 ---------SALLERKKPDLIFNTIAYTKVDQAEDEENKAHLLN--TTFPAMLARLAKSQ 99
Query: 120 ENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAA-EKFIYEKCSNFAILRSSII 177
LIH STD V++G K S Y E D P +VYG +K++ EK + N I+R++ +
Sbjct: 100 NCKLIHFSTDFVFDGKKDSPYTETDPTNPQSVYGDTKLSGEEKLLESGYENILIIRTAWL 159
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+GP + + K L + + E + HD+ P Y D+ + +AL
Sbjct: 160 FGPYKTNFIHKIL------NFARERENLTVVHDQSGSPTYTPDLAEYTIALLK------N 207
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ + + NV + S ++A+ + + PV S+ + P +D +KL
Sbjct: 208 EAKGIFNVVNSGKASWCELADEAISCSAINCR-VDPVPTSAYPTKAKRPPYSVLDTSKLT 266
Query: 298 QTLNIDP 304
+ I P
Sbjct: 267 EVTGITP 273
>gi|305665781|ref|YP_003862068.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170]
gi|88710545|gb|EAR02777.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170]
Length = 268
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-- 58
M KK +LV G +G LG+ L +IE + P+L SFVF D
Sbjct: 1 MKKKSILVTGASGQLGK----CLRKIE------------SDYPEL-------SFVFKDAS 37
Query: 59 -VDLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
+D+ + S FD+ D +NCAA + E +P A IN + +S
Sbjct: 38 QLDITNKSAVFKLFDSFNF-----DFCINCAAYTNVNEAEKNPKQAFRINEEGT--GNIS 90
Query: 114 SFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL 172
KE +L+H+STD V++G K Y ++D P+N YGKSK+A E+ I + + I+
Sbjct: 91 ELCRQKEVVLLHISTDYVFDGEKGTPYTKDDMPNPINEYGKSKLAGERQIQQTTRRYYII 150
Query: 173 RSSIIY---GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR-CPVYVRDVVKIILAL 228
R+S +Y G + + K L+K K+ DE + CP ++ ++ +
Sbjct: 151 RTSWLYSEFGKNFYTTILK----------LAKSNKILRVTDEQKGCPTNANNLAAYLMQI 200
>gi|78060715|ref|YP_367290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383]
gi|77965265|gb|ABB06646.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383]
Length = 314
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 29/319 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L++G G LG+ + L+ E VA + L P + DV
Sbjct: 1 MPHPTILLIGAAGLLGRAVAASLAR-ESSLNLVATIRNPQGAGAKRLALPPENLAELDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ QP V+ CAA P VCE DP A +INV + + +
Sbjct: 59 ------LDEPALEHLFATRQPAAVIICAAERRPDVCERDPAGARAINVTAQAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGKAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLSCVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
++GP + S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LFGPIVDWSESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVADVIRDLTLRHL 229
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK---PVSASSVDRGVQSPADIS 290
+ + L + G +++ +A+ +A G +L + P A+ P D
Sbjct: 230 A-GASITGLRHWSGEAPMTKYDIAQRIAAALGIDAALKRIDQPTDATP------RPYDCH 282
Query: 291 MDITKLVQTLNIDPVTYKD 309
+D ++ V++ ID T D
Sbjct: 283 LDASR-VRSAGIDHATPFD 300
>gi|421869373|ref|ZP_16301010.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia H111]
gi|358069980|emb|CCE51888.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia H111]
Length = 321
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+ CAA P VCE DP +A +INV + + + + +STD V++G
Sbjct: 79 KPAAVILCAAERRPDVCERDPAAARAINV--TAPARIGALAARYGAWTLGISTDYVFDGK 136
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP---QTISPVPKSLPI 192
+ Y E+ P+N+YG++K+ E + +LR +++GP + S V +P
Sbjct: 137 AAPYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIADWSESAVTSLVPA 196
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVS 252
+ S + V R P Y DV ++I LT R L+ D + + + + ++
Sbjct: 197 V-VASARPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLAGDT-VTGIRHWSSEEPMT 254
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
+ +A+ +A G SL P++ + P D +D T+ V+ L ID T D
Sbjct: 255 KYAIAQRIAAALGIEASL-TPITQPT--DATPRPYDCHLDATR-VRALGIDYATPFD 307
>gi|291550330|emb|CBL26592.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14]
Length = 283
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG +PDV++NC ++ +CE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGIVNRPDVIINCCGVTDTDLCEKEPEHAYRVNALGARN--LSIVARKNGAKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGQSKKPYTEFDDTNPLTVYGASKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ L V +G+ + D+ P +D+ ++IL L
Sbjct: 163 RVL------EVAEQGKTLSVAGDQFGSPTSAKDLARMILYL 197
>gi|134291975|ref|YP_001115744.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4]
gi|134135164|gb|ABO59489.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4]
Length = 317
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+S+ +L++G +G LG+ + LS E VA ++ + P DV
Sbjct: 4 VSQPTILLIGASGLLGRAVAAALSR-EASLTLVATIRNADTAGARRVALPPEHTARLDV- 61
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE+DP +A +INV + + +
Sbjct: 62 ------LDQPALERLFDARRPSAVIVCAAERRPDVCESDPSAARAINVDAPAR--IGALA 113
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR +
Sbjct: 114 ARYGAWTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPL 173
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSK------------GEKVEFFHDECRCPVYVRDVVKI 224
+YGP + W +S ++ E R P Y DV ++
Sbjct: 174 LYGPI----------VDWRESAVTSLVPAIVAAAQPGAEPARMDAWAIRYPTYTPDVAQV 223
Query: 225 ILALTNRWLS 234
I LT R L+
Sbjct: 224 IRDLTLRHLA 233
>gi|218438467|ref|YP_002376796.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
gi|218171195|gb|ACK69928.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
Length = 294
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++G G +GQ L L+ I G VA +DL
Sbjct: 2 KKILLIGNNGQVGQELQSTLAPI-GDLTGVARDQ---------------------LDLTQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V ++ P+++VN AA + E++ + A ++N + + L+ + L
Sbjct: 40 PDNIRQV-IQDTHPEIIVNAAAYTAVDKAESETELAYTVNETAPKI--LAQECQKLGATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + EED+ P+ YG SK+A E+ I + C N+ ILR++ +YG
Sbjct: 97 IHISTDYVFDGTRGIPLTEEDKTNPIGAYGASKLAGEQAIQDNCQNYIILRTAWVYGTYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
K++ D E++ D+ P + +D+ I L
Sbjct: 157 KGNFVKTMLRLGADR-----EQLRVVADQIGTPTWAKDIADTITQL 197
>gi|340623114|ref|YP_004741566.1| Spore coat polysaccharide biosynthesis protein spsK [Capnocytophaga
canimorsus Cc5]
gi|224184716|gb|ACN39589.1| putative dTDP-4-dehydrorhamnose reductase [Capnocytophaga
canimorsus]
gi|339903380|gb|AEK24459.1| Spore coat polysaccharide biosynthesis protein spsK [Capnocytophaga
canimorsus Cc5]
Length = 284
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 135/310 (43%), Gaps = 35/310 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LG + I+GK + T S LD D ++
Sbjct: 7 KNILVTGANGQLGSEI----QNIQGKTKNYFFTGASD------LDI---------TDRQA 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S F +K +VVNCA + E+D +A IN + V +L+ + L
Sbjct: 48 ISDF----VKKNNIQIVVNCAGYTNVDKAEDDIQTANLIN--NIAVGYLAEVCKENNASL 101
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V+ G K+ Y E D P+ +YG++K+ EK I ++ I+R+S +Y
Sbjct: 102 IHISTDYVFGGTKNTPYSEADPTEPLGIYGRTKLEGEKAIQNADIDYLIIRTSWLYSLSF 161
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ K+ I + S+ +++ D+ P RD+ I+ + + L + +++
Sbjct: 162 GNNFVKT-----IQRLSSERNELKVVFDQVGTPTNARDLAAFIVHIIEKDLYKRREVYHF 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N G S A + + G + L+KP +S V+ P+ +D +KL N
Sbjct: 217 SNEG---VCSWFDFAAEIVRMSG-NDCLVKPCLSSEFPSKVKRPSYSVLDKSKLKNDFNY 272
Query: 303 DPVTYKDGVK 312
+K+ +K
Sbjct: 273 TISHWKEALK 282
>gi|1314582|gb|AAC44075.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. S88]
Length = 288
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 18/284 (6%)
Query: 36 THHSTPLPQLLLD-ALPHSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
T H + Q L + A H +F + DL +A K QP+++V+ AA +
Sbjct: 6 TGHDGQVAQALGEQAEGHELIFTSYPEFDLSKPETIEAAVAKI-QPELIVSAAAYTAVDK 64
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
E++P+ AM+IN V L+ +IHLSTD V++G + ++E+D P+ V
Sbjct: 65 SESEPELAMAINGDGPGV--LARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGPLGV 122
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YG +K+A E+ + + A++R + +Y P + V L + L+ D
Sbjct: 123 YGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDTLN------VVED 176
Query: 211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVV---AEIRGYS 267
+ CP D+ IL + W ++ L + G + A + + G
Sbjct: 177 QQGCPSSALDIATAILKVVGHW-QQNGATSGLYHFTGSGETNWADFARAIFAESAKHGGP 235
Query: 268 TSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
T+ + + S + PA+ ++ K +T ++D V
Sbjct: 236 TAEVTGIPTSGYPTPAKRPANSRLNCDKFAETFGYRAPAWQDSV 279
>gi|389793148|ref|ZP_10196322.1| dTDP-4-dehydrorhamnose reductase [Rhodanobacter fulvus Jip2]
gi|388434881|gb|EIL91808.1| dTDP-4-dehydrorhamnose reductase [Rhodanobacter fulvus Jip2]
Length = 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L QPDV+VN AA + V + + A++ V V L + + L+IH STD V
Sbjct: 58 LDRAQPDVIVNAAAYTA--VDRAEQEEALATRVNGEAVGVLGQWAATHDALVIHYSTDYV 115
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G +S Y+ + AP+ YG+SK+A E+ + + ++ I R++ +Y + + L
Sbjct: 116 FDGRQSQPYEVDARTAPLGAYGRSKLAGERALRDSGADHLIFRTAWVYAAHGHNFLRTML 175
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ ++ E++ D+ P +V L +RWL+ D+ Q
Sbjct: 176 RLG------AEREELRVVADQHGAPTDTSLIVNGSLTALDRWLATDRNEQ 219
>gi|388547016|ref|ZP_10150286.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. M47T1]
gi|388274937|gb|EIK94529.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. M47T1]
Length = 291
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+DL G V +P +++N AA + E + D A +IN + + F E
Sbjct: 36 LDLAQPEGIREVVRTL-RPTLIINAAAHTAVDQAETEEDLAFAINATAPRL-----FAEE 89
Query: 119 KENL---LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
L LIH STD V++G K Y E+DE P+ VYG+SK+ EK I ILR+
Sbjct: 90 AAALDIPLIHYSTDYVFDGRKDGAYNEDDETNPLGVYGRSKLEGEKAIRYVGGKHLILRT 149
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
S +Y ++ L +Q +L + ++ D+ P + + AL WL+
Sbjct: 150 SWVY---SLHGRNFLLTMQ---RLLQEKPELRVVADQIGAPTWAGTIAGTTQALVEHWLN 203
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISM 291
++ S A+ + + + ++++P+++S+ P + +
Sbjct: 204 GQAGPWGTFHLTAKGETSWFGFAQEIGKHLLAQDKPCAVLEPIASSAYPTPAVRPLNSRL 263
Query: 292 DITKLVQTLNIDPVTYKDGVKLTLA 316
D ++L Q N+ ++D + LA
Sbjct: 264 DCSRLEQQWNVHLPNWRDALIECLA 288
>gi|293602505|ref|ZP_06684951.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC
43553]
gi|292819267|gb|EFF78302.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC
43553]
Length = 298
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 26/175 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +GQ L + L PL +++ + DVDL
Sbjct: 2 KILLLGKDGQVGQELQRTL----------------LPLGEVI------ALGRHDVDLTDL 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A L+ +PD +VN AA + EN+ D A IN + V+ L+ ++ LLI
Sbjct: 40 DALHAT-LRVHRPDTIVNAAAYTAVDKAENEKDLAAQINCRA--VSALAQYSNEHNALLI 96
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V++G K+ Y E D + P +VYG +K+A EK I + + R+S ++
Sbjct: 97 HYSTDYVFDGAAKNPYSETDPVGPQSVYGATKLAGEKAIIDSGCKALVFRTSWVF 151
>gi|218258015|ref|ZP_03474457.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii
DSM 18315]
gi|423343005|ref|ZP_17320719.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
gi|218225814|gb|EEC98464.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii
DSM 18315]
gi|409216681|gb|EKN09664.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
Length = 288
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 42/232 (18%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD--- 60
K +LV G G LG + Q +AA + PQ ++FVF DVD
Sbjct: 2 KTILVTGANGQLGNSIRQ-----------LAAGY-----PQ-------YAFVFTDVDTLD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ DA +K Q D ++NCAA + E+D A+ + V L
Sbjct: 39 ICDAQAVDAF-VKEKQADYIINCAAYTAVDKAEDD--EALCFRINRDAVRNLGEAARMAG 95
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G Y E D P +VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 96 ARVIHVSTDYVFDGTNHLPYVETDATCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLY- 154
Query: 180 PQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
++ ++L G E++ D+ P Y D+ ILA+
Sbjct: 155 --------SEFGNNFVKTMLRLGNEREQLSVVFDQIGSPTYAGDLAATILAV 198
>gi|63054927|gb|AAY29004.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia]
Length = 299
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 131/326 (40%), Gaps = 49/326 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G G +GQ LL+ L+ + VA T T L + +P FD
Sbjct: 3 VLLFGANGQVGQELLRSLAPLGSI---VATTRSGT-----LANGVPCEVADFD-----NP 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
G L PD VVN AA + E D ++A N P + W ++ L
Sbjct: 50 GSLVALLDRVHPDTVVNAAAYTAVDRAEQDREAAWRTNAESPGVIARWCAA----AGVPL 105
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD V++G + Y+E D P+ VYG+SK+A E I E I R++ +Y P +
Sbjct: 106 VHFSTDYVFDGQGTRPYRESDPTGPLGVYGESKLAGEIAIREAGGRHLIFRTAWVYAPHS 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPV---YVRDVVKIIL----ALTNRW 232
+ ++ ++L G + + D+ P + DV + L L+ W
Sbjct: 166 AN---------FLRTMLRVGAERDLLRVVADQVGTPTPAALIADVTALALQHPGQLSGTW 216
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGY--STSLIKPVSASSVDRGVQSPADIS 290
L G + A RG ++ ++ + + PA
Sbjct: 217 --------HLTATGEASWHGFAEAIFAAAVARGVLPRAPRVEAITTADYPTPARRPAYSH 268
Query: 291 MDITKLVQTLNIDPVTYKDGVKLTLA 316
+D+T+L ID T++DG+ +A
Sbjct: 269 LDVTRLQSDFGIDLPTWQDGLAQVMA 294
>gi|262275863|ref|ZP_06053672.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886]
gi|262219671|gb|EEY70987.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886]
Length = 326
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K QPDV++N AA + E +P++A ++N N L+ + +LIH+STD V
Sbjct: 47 VKAEQPDVIINAAAYTAVDKAETEPETAYAVN-DKGCEN-LALACKEHNVILIHVSTDFV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGPQTISPVPKS 189
++G S Y+ +D P+NVYG SK+A EK + E A I+R++ +Y + V
Sbjct: 105 FDGTNSTPYQTDDHPNPINVYGASKLAGEKKVAEILGAQATIIRTAWVYSVHGSNFVKTM 164
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
L ++++ E++ +D+ P + + + ++ +L + LSE K
Sbjct: 165 L------RLMAEKEQLNIVYDQIGTPTWAKGLATMMWSLVEKRLSEGK 206
>gi|401674923|ref|ZP_10806920.1| dTDP-4-dehydrorhamnose reductase [Enterobacter sp. SST3]
gi|400217938|gb|EJO48827.1| dTDP-4-dehydrorhamnose reductase [Enterobacter sp. SST3]
Length = 296
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL + SG A ++ QPDVVVN AA + E+D A S+N + V+ ++ T N
Sbjct: 39 DLTNLSGI-AETIRRVQPDVVVNAAAHTAVDKAESDVGLAQSLNADA--VDIIAKETANI 95
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H STD V++G S ++ EDE P+NVYG++K++ E I I R+S +Y
Sbjct: 96 NALLVHYSTDYVFDGSGSHFRREDEKTGPLNVYGETKLSGELAIINNNPRHLIFRTSWVY 155
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ + + L + + E++ +D+ P + ++ +SE+
Sbjct: 156 ATRGANFIKTMLRLA------GEKEELSIINDQFGAPTGAELIADCTSLAIHKVMSENAN 209
Query: 239 MQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSL--IKPVSASSVDRGVQSPADISMDIT 294
+ L+ G + AE G S ++ + VS SS + P + +
Sbjct: 210 YGIYHLVASGETTWYHFANLIFETAEYNGESLNVKKVNGVSTSSYVTPAKRPLNSRLCNR 269
Query: 295 KLVQTLNIDPVTYKDGV 311
K Q N+ +K GV
Sbjct: 270 KFEQVFNVSLPDWKTGV 286
>gi|212694336|ref|ZP_03302464.1| hypothetical protein BACDOR_03862 [Bacteroides dorei DSM 17855]
gi|212662837|gb|EEB23411.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei DSM 17855]
Length = 287
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 52 HSFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV 109
+ ++F DV+ + AV LK Q DV+VNCAA + V + D AM+ + + V
Sbjct: 26 NRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAAYT--NVDRAEDDFAMADLLNNKAV 83
Query: 110 NWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
L+ LIH+STD V++G K+ +E E P+ VYGK+K+A E+ + +
Sbjct: 84 ENLAVAAAETGATLIHVSTDYVFQGDKNIPCRESWETDPLGVYGKTKLAGEQSLVKAGCK 143
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ I R++ +Y SP K+ ++ + + S + ++ D+ P Y D+ +I +
Sbjct: 144 YLIFRTAWLY-----SPFGKNF-VKTMRQLTSTKDSLKVVFDQVGTPTYAGDLAALIYNI 197
Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
L + + + N G S A+ + E+ G + I+P + V+ P
Sbjct: 198 IEENLLDRQGVYHFSNEG---VCSWYDFAKEICELSGNNCD-IQPCHSDEFPSKVERPHF 253
Query: 289 ISMDITKLVQTLNIDPVTYKDGVK 312
+D TK+ +T I +KD +K
Sbjct: 254 SVLDKTKVKETFGITIPYWKDSLK 277
>gi|429507082|ref|YP_007188266.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488672|gb|AFZ92596.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 282
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LG+ L + L EG Y+V A L + +++ V +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRY------- 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +PD+VVN AA + CE + D A IN + L + EN I
Sbjct: 47 ------SFSHYKPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENTGAKFI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +YG
Sbjct: 99 HISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGH 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + +V +D+ P Y +D+ + ++ L +R
Sbjct: 159 NFVNTMLKLA------DTHNQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|242791620|ref|XP_002481794.1| NAD dependent epimerase/dehydratase family protein [Talaromyces
stipitatus ATCC 10500]
gi|218718382|gb|EED17802.1| NAD dependent epimerase/dehydratase family protein [Talaromyces
stipitatus ATCC 10500]
Length = 312
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 37/273 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIE----GKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
LV G TG LG+ + + + G+ Y+ AA P +L A +L
Sbjct: 5 ALVTGATGLLGREVTKSFKQAGWLTVGQGYNRAA-------PPTILKA----------NL 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + + L +P VVV+CAA P CE +P+ A INV ++ L+ T +
Sbjct: 48 EDPADVKRI-LDEAKPQVVVHCAANRQPDACEKNPEQARKINVEATRA--LAEGTNARGI 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LLI++STD V+ G+ ++ Y+ + + P N+YG+ K E+ + E +LR +
Sbjct: 105 LLIYISTDYVFAGLEGEAPYETDAKTNPTNIYGEMKRDGEEAVLEATKETGLGVVLRVPV 164
Query: 177 IYGPQTISPVPKSLPIQWIDSV-LSKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWL 233
+YGP + +S +D+V SK D+ R P +DV ++ + R++
Sbjct: 165 LYGPTEYN--GESAVNTILDAVEKSKDPNANIKMDDWARRFPTNTQDVGRVCNDIAVRYI 222
Query: 234 SEDKQMQLL---LNVGGPDRVSRVQMAEVVAEI 263
+ ++ L L+ + +++ +MA+ +A+I
Sbjct: 223 RDKNNIKSLPKILHFSAEEDMTKYEMAQRIAKI 255
>gi|118580513|ref|YP_901763.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379]
gi|118503223|gb|ABK99705.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379]
Length = 280
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 46/294 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G LG L+ L E G+ DV D+D+ S
Sbjct: 2 ILVIGCNGMLGSDLMT-LLEGRGRGVDVR-----------------------DLDITSLE 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ + +P VV+NCAA + CE++ ++AM +N V L+ T L+
Sbjct: 38 STERLLTSL-KPSVVINCAAYTDVDGCESNRETAMLVNAEG--VANLARVTRGIGARLVQ 94
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G K S Y E+D+ AP++VYG+SK+ E+ + I+R+ +YG Q +
Sbjct: 95 ISTDYVFDGAKGSPYLEDDQTAPLSVYGQSKLLGERNAATN-PDHLIVRTQWLYGLQGNN 153
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V L + ++ E + D+ P + D+ + ILAL R N
Sbjct: 154 FVETMLRLG------TERECLTVVDDQIGSPTWTVDLSRAILALLARGCRGTYHAA---N 204
Query: 245 VG--GPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
G + +R E +R ++P++ ++R + P ++D +KL
Sbjct: 205 AGFCSWNEFARAIFREAGLGVR------VEPMTTEQLNRPAKRPLYSTLDCSKL 252
>gi|378776703|ref|YP_005185140.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507517|gb|AEW51041.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 294
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 40/313 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E + Y A T D+
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSEHEVY--ACTR----------------------DILDC 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + V L +PD+++N AA + E++PD A +N + V L ++ K
Sbjct: 38 SKLERVHDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCHLVNYCSFKNIP 95
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 96 LIHLSTDYVFDGKKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQ 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ V L ++ S +++ D+ P RD+ +++ + +
Sbjct: 156 GKNFVKTIL------NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKIRHSSFDYWG 209
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKL 296
L + G + + A V + L + P+ + P + +D TK+
Sbjct: 210 LYHYAGQGVTNWHEFANVFLNMAKEKQLLLTLTDLNPIKSEEYPTRATRPKNSVLDTTKI 269
Query: 297 VQTLNIDPVTYKD 309
L I ++K+
Sbjct: 270 ETILGIKSCSWKN 282
>gi|406937435|gb|EKD70884.1| hypothetical protein ACD_46C00346G0001 [uncultured bacterium]
Length = 294
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ V+G +GY+G HL + + K D T+ + + FD+
Sbjct: 3 KTAVIGASGYIGSHLFR---KYRTKFPDCVGTN---------FLQMKEGLIPFDL---RE 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + L+ Q V+ +A S CE +P + +NV +L + E L +
Sbjct: 48 PKVEDLKLEETQHKAVIISSAKSNIAWCEANPKESYQLNVRGTL-----QLVKQLEKLSL 102
Query: 125 H---LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H LS+D V++G Y ++ I P+ YG+ K E+ + + + I+R S IYG
Sbjct: 103 HILFLSSDYVFDGQTGSYSDQAPINPITEYGRQKAEVERELPNLTNKYTIIRLSKIYG-- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + I S L KGEK+ D+ P ++ D+ +I + ++++ ++
Sbjct: 161 --TKWKDNTLIDAFASNLLKGEKIMVATDQFFSPTHINDIASMI------FYTQEQGLKG 212
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
LLNV + SR Q+A + E S+SL++ V S+ P + S+ + +Q +
Sbjct: 213 LLNVCKSNPYSRYQIALKLVEELKVSSSLLEGVPLHSISGMEICPLNTSIVCSPCLQQM 271
>gi|170756261|ref|YP_001782318.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str.
Okra]
gi|169121473|gb|ACA45309.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str.
Okra]
Length = 298
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
P++V+NCAA + CE++ + A +N S L+ E + LIH+STD V+EG
Sbjct: 65 PNIVINCAAYTNVDSCEDNYELAFKVN--SLGARNLAIACEKIKAKLIHISTDYVFEGNG 122
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++ YKE D PV+VYGKSK+ E+++ E CS + I+R+S +YG
Sbjct: 123 QAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYG 166
>gi|91776363|ref|YP_546119.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT]
gi|91710350|gb|ABE50278.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT]
Length = 306
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++P+ A +IN + + L+ LL+H STD V++G
Sbjct: 54 KPDLIINPAAYTAVDKAESEPELAYAINGTAPGI--LAEEAAKLNALLVHYSTDYVFDGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E DE P++VYG SK+A EK I E +N I R+S +YG K+ ++
Sbjct: 112 KTTPYTELDETNPLSVYGASKLAGEKAIQEVGANHLIFRTSWVYG-----AYGKNF-MRT 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + ++ + + D+ P + + + W + + L+N G
Sbjct: 166 ILRLAAERDSLNIVADQFGAPTSTESIADATITALHAWDGTQRGVYHLVNTG 217
>gi|402837885|ref|ZP_10886400.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium OBRC8]
gi|402274316|gb|EJU23500.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium OBRC8]
Length = 286
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDV+ NCAA + CE D D+A IN + L+ E+ ++ L+H STD V+ G
Sbjct: 52 PDVIFNCAAHTNVDKCEEDIDNAYKINAIGAQN--LAMIAEHIDSKLVHFSTDYVFSGED 109
Query: 137 SFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ E + A P VYGKSK+ E+ + + CS + I+R++ +YG + V L +
Sbjct: 110 EIPRIESDFANPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDGN-NFVRTMLNLS-- 166
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+ +K+ D+ P Y +D+ K L L+
Sbjct: 167 ----KQNDKLTVVGDQFGSPTYTKDLAKAALNLS 196
>gi|392589163|gb|EIW78494.1| NAD(P)-binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 329
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 135/313 (43%), Gaps = 49/313 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G +G LG + Q +A + S L +L L + FF + K
Sbjct: 2 KILVTGASGVLGSAVYQAFKTHGHNVTGLANSRPSEGLTKLNLLDEAETAAFFK-NWKKD 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDS---AMSINVPSSLVNWLSS--FTENK 119
S +P V++CAA P ND +S +++ VP +L ++ SS FT
Sbjct: 61 SN---------EPAWVIHCAAERRPDAFTNDANSIATKLNVEVPRNLASFSSSLGFT--- 108
Query: 120 ENLLIHLSTDQVYEGVK-------SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN---- 168
LI++STD V++G+K S Y + P+ YG SK E + N
Sbjct: 109 ---LIYISTDYVFDGLKDNKERTPSGYPTSAKTNPLQAYGVSKRDGEDKVLAARDNEGAK 165
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQ-WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
+LR ++YGP +P + +D V+ K + E R P V D+ + ++
Sbjct: 166 ATVLRVPVLYGP---APENSDTAVNVLMDYVIDKKSR-EMDDYAARYPTNVVDIARFLVR 221
Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEI-------RGYSTSLIKPVSASSVD 280
L+ + +K + +++ +R ++ QM V A I S + P+SA+ D
Sbjct: 222 LS----ASEKDLPRIIHCSAKERFTKYQMCGVFARILRQVPGSENVSVEHLNPISAAPTD 277
Query: 281 RGVQSPADISMDI 293
GV P D +DI
Sbjct: 278 -GVARPYDSQLDI 289
>gi|404406454|ref|ZP_10998038.1| dTDP-4-dehydrorhamnose reductase [Alistipes sp. JC136]
Length = 294
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG--VK 136
VVVNCAA + E+D A +N ++ V +L++ + +LIH+STD V+ G
Sbjct: 59 VVVNCAAYTNVDRAEDDAARAELLN--ATAVGYLANAMQKSGGVLIHISTDYVFGGDPYN 116
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
+ +EE + P VYG +K+ E+ + I R++ +Y + V L +
Sbjct: 117 TPCREEQKGTPTGVYGVTKLQGEEAVRASGCRHLIFRTAWLYSEDGANFVKTMLRLT--- 173
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
+ E+++ D+ P Y D+ I + R L E ++ + G S
Sbjct: 174 ---EEKEELKVVFDQAGTPTYAGDLAGAIFGIVERRLFEGREGTYHYSNEGV--CSWYDF 228
Query: 257 AEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLA 316
+ +AE G+ I+P + V+ P+ +D TK T ++ ++D ++ +A
Sbjct: 229 TKAIAEYAGHRRCDIQPCHSDEFPSKVKRPSYSVLDKTKFRTTFGLEIPYWRDSLEKCIA 288
>gi|22298494|ref|NP_681741.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus
BP-1]
gi|22294674|dbj|BAC08503.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus
BP-1]
Length = 304
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 26/179 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K R+L++G TG +G L+Q + P +++ A + V D++
Sbjct: 7 KMRLLILGATGQVGWQLVQ----------------QAPPRVEVIPVARQGTAVTLDLE-- 48
Query: 63 SGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DA++ LK +PDVV+N AA + E + + A IN S+ V L++
Sbjct: 49 ---DLDAISPLLKTLRPDVVINAAAYTAVDQAEQETERAQRIN--STAVGLLAATMAELG 103
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LLIH STD V+ G +S Y+E D AP+N YG +K E+ I ILR+S +Y
Sbjct: 104 GLLIHYSTDYVFAGNQSLPYRETDAPAPLNAYGYTKWLGEQAIARHHPAHLILRTSWVY 162
>gi|197120379|ref|YP_002140806.1| bifunctional glycoside hydrolase/dTDP-4-dehydrorhamnose reductase
[Geobacter bemidjiensis Bem]
gi|197089739|gb|ACH41010.1| glycoside hydrolase and dTDP-4-dehydrorhamnose reductase, putative
[Geobacter bemidjiensis Bem]
Length = 730
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+ R+L+VG TG LGQ + H P H ++D+
Sbjct: 448 RGRILIVGKTGTLGQS------------FSRLCRHRGIPC---------HLLSRGEIDIA 486
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + A A +P VVN A E D + N V L++ +
Sbjct: 487 SAASV-ATAFDRYEPWAVVNGAGFVRIDDAEGDASTCFRENTVGPAV--LAAECARRGVP 543
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
L+ S+D V+ G K + Y+E D ++P+N+YG+SK AE+ + + +LR+S +GP
Sbjct: 544 LMTFSSDMVFNGSKRTAYQERDPVSPINIYGQSKAEAERQVLKLYPGALVLRTSAFFGPW 603
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ V +L L+ GE VE D P Y+ D+V L L L + +
Sbjct: 604 DRYNFVTVTL------RRLAAGETVEAASDLVVSPTYIPDLVHAGLDLL---LDGESGIW 654
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSV 279
L N G VS ++A A++ G +S + P A+S+
Sbjct: 655 HLSNAGA---VSWAELARCCAKMAGLDSSRVIPRPAASL 690
>gi|429244148|ref|ZP_19207627.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum
CFSAN001628]
gi|428758814|gb|EKX81208.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum
CFSAN001628]
Length = 297
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
P++V+NCAA + CE++ + A +N S L+ E + LIH+STD V+EG
Sbjct: 64 PNIVINCAAYTNVDSCEDNYELAFKVN--SLGARNLAIACEKIKAKLIHISTDYVFEGNG 121
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++ YKE D PV+VYGKSK+ E+++ E CS + I+R+S +YG
Sbjct: 122 QAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYG 165
>gi|384267318|ref|YP_005423025.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900437|ref|YP_006330733.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens Y2]
gi|380500671|emb|CCG51709.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387174547|gb|AFJ64008.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens Y2]
Length = 282
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + N
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--GNT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + +V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHNQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|365878899|ref|ZP_09418350.1| hypothetical protein BRAO375_1250004 [Bradyrhizobium sp. ORS 375]
gi|365293170|emb|CCD90881.1| hypothetical protein BRAO375_1250004 [Bradyrhizobium sp. ORS 375]
Length = 393
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R LVVG +G++G +L L P T ++ ++ H FD +
Sbjct: 86 RALVVGASGFVGGAILSRLG-----PERAVGTRYN--------NSARHGLARFDA---AR 129
Query: 65 SGF-DAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+GF D + G V+ P +C P INV S++ L + +
Sbjct: 130 NGFADLTRVMRGDFSHVILAHGAINPELCAECPVETGKINV-ESMIRLLQEILDARITP- 187
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR-SSIIYGPQT 182
I LSTD V++G + ++++ P YG+ K A E+++ + + ++R S ++ G +
Sbjct: 188 IFLSTDYVFDGTRGLWEDDAAQCPNTEYGRQKAAVEQWLQARSRPWLVVRLSKVVSGERN 247
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S+ QW+D V + G+ ++ D+ P++V DV + I+ L + +
Sbjct: 248 T----HSVLGQWVDDVFA-GKSMQSATDQIFSPLHVHDVAESIINLA------ESGRTGI 296
Query: 243 LNVGGPDRVSRVQMAE-VVAEIRGY---STSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
NV GP+ +SR ++ +VA I+ ++KP S + P + S+ I K
Sbjct: 297 YNVAGPEALSRYELNNLLVASIKALVPQVNVVVKPCSLRDIRFREHRPLNTSLSIKKAAA 356
Query: 299 TLN 301
+N
Sbjct: 357 AIN 359
>gi|19705006|ref|NP_602501.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19712914|gb|AAL93800.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 292
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 148/312 (47%), Gaps = 34/312 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+VL++G G LG L + Y + + + ++ L+ + +++DL
Sbjct: 2 KKVLILGSCGMLGSVLCE---------YLLQNNYQVIGIDKINLENKFEKYKLYNIDLLD 52
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSA--MSINVPSSLVNWLSSFTENKEN 121
+ V + +P++++N AA+ +CE + + A + +++ +N LS K
Sbjct: 53 FFKVEEVIFQ-EKPNIIINAAAIVNLNLCEENYELAELLHVDLNEQFLN-LSKKISFK-- 108
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I++STD V++G KS Y EED P+N Y K+K E+ + +K ++ ++R++ IYG
Sbjct: 109 -FIYISTDSVFDGTKSNYIEEDLAIPLNNYAKTKFLGEEEV-KKMEDYIVIRTN-IYG-- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
S SL ++W L+K +K+ + + PV + + IL L K +
Sbjct: 164 -YSDRQNSL-LKWAYDELNKNKKIYGYKNVIFNPVSIYQLADAILILI------QKNFKG 215
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+LN+ +S+ + +++ E +L++ + ++ P + ++ I K+ N
Sbjct: 216 ILNIVSDKPISKFEFLKIIEEYLK-KKNLVQESVLEDENSNLKRPKNTALSIKKME---N 271
Query: 302 IDPVTYK--DGV 311
I YK DG+
Sbjct: 272 IIEKRYKIEDGI 283
>gi|404403584|ref|ZP_10995168.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fuscovaginae UPB0736]
Length = 294
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +IN + + L+ + LIH STD V++G
Sbjct: 55 RPDLIINAAAHTAVDQAESEPDLAFAINATAPGI--LAQEAADLGIPLIHYSTDYVFDGS 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+DE P++VYG+SK+ E+ I S ILR+S +Y + + L +Q
Sbjct: 113 KAEPYTEDDETNPLSVYGRSKLTGERSIAAAHSQHLILRTSWVYSNHGRNFL---LTMQ- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + AL RW + ++ S
Sbjct: 169 --RLLQEKPELRIVADQVGAPTWAGTIANSTRALIERWQAGQAGAWGTYHLTASGETSWF 226
Query: 255 QMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E ++++ + +S+ P + +D ++L + + + +
Sbjct: 227 GFAQAIGEQLLALNKPCAILEAIPSSAYPTPATRPLNSRLDCSRLSREWQVSQPDWHTAL 286
Query: 312 KLTLAAEA 319
+ LA +
Sbjct: 287 RECLAEQG 294
>gi|448239582|ref|YP_007403640.1| putative dTDP-4-dehydrorhamnose reductase [Geobacillus sp. GHH01]
gi|445208424|gb|AGE23889.1| putative dTDP-4-dehydrorhamnose reductase [Geobacillus sp. GHH01]
Length = 280
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P VV++ AA + + E++PD A +IN + + +E L+++STD V++G
Sbjct: 51 NPSVVIHAAAYTKVDLAESEPDQAFAINAYGT--RNVVVVSEKVGAKLVYVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E P++VYGKSK+A E+F+ + S F I+R+S +YG + V L +
Sbjct: 109 ANVPYHEFAPTNPLSVYGKSKLAGEQFVRDLHSKFFIVRTSWVYGKHGNNFVKTMLKLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ +++ HD+ CP Y D+ IL L + + +V S
Sbjct: 168 -----QERDELMVVHDQIGCPTYTVDLANCILELIQ------TEKYGIYHVSNSGHCSWY 216
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
+ A+ + E G + P + R PA
Sbjct: 217 EFAKAIFEEAGIEVK-VNPCTTKDFPRPAPRPA 248
>gi|428775036|ref|YP_007166823.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
gi|428689315|gb|AFZ42609.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
Length = 294
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP+V++N A + E++ A ++N + V L+ E L+H+STD V++G
Sbjct: 51 QPNVIINAGAYTAVDKAESEESLAYAVNGNAPTV--LAESAEQIGARLLHISTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D+ P+ VYG+SK+ E+ I + SN+ ILR++ +YG +
Sbjct: 109 KHKPYTETDDPNPLGVYGQSKLVGERGIQQHSSNYIILRTAWVYGAYGSG--------NF 160
Query: 195 IDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILAL 228
+ ++L GE+ E + D+ P + D+ K I+ L
Sbjct: 161 VKTMLRLGEEREELNVVSDQVGTPTWSNDIAKAIVGL 197
>gi|218780350|ref|YP_002431668.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans
AK-01]
gi|218761734|gb|ACL04200.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans
AK-01]
Length = 292
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++L+ G G LG ++ L TH H F +D
Sbjct: 1 MENLKILITGNQGLLGTECVRVLY----------PTHEI------------HGFSSNILD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTEN 118
++ S + +K +PD+VVNCAA + CE A +N P +L + +
Sbjct: 39 IRDKSQVEG-RIKEIRPDIVVNCAAYTKVDSCETHFQDAWDVNAIGPENLARAVRKYG-- 95
Query: 119 KENLLIHLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
L+H+STD V++GV+S Y E+D P++ YGKSK+A E+ + C AI+R++
Sbjct: 96 --GFLVHISTDYVFDGVRSIPHPYTEDDSPNPLSAYGKSKLAGEEAVRSLCPLHAIVRTA 153
Query: 176 IIYG 179
+YG
Sbjct: 154 WLYG 157
>gi|325279645|ref|YP_004252187.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM
20712]
gi|324311454|gb|ADY32007.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM
20712]
Length = 293
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 140/320 (43%), Gaps = 50/320 (15%)
Query: 6 VLVVGGTGYLGQHLLQ-GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+L+ G G LG L + G S PL ++ F DV
Sbjct: 4 ILITGANGQLGSELRKIGFS----------------PLDEVF---------FTDVAELDI 38
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + A+ ++ + D ++NCAA + E++P A IN + V L+ + + L
Sbjct: 39 TDYTAIEKFIQVHEVDTIINCAAYTAVDRAEDEPGPAAEIN--TQAVANLAKAAQKGDCL 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G + Y E+ + PV+VYGK+K+A E+ I + I+R++ +Y
Sbjct: 97 LIHISTDYVFDGTATTPYTEKIKTCPVSVYGKTKLAGEEAIIRSGCFYIIIRTAWLYS-- 154
Query: 182 TISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ ++ ++L E ++ +D+ P Y D+ K I+ + ++ D +
Sbjct: 155 -------AFGHNFVKTILRLAEERPEINVVNDQIGTPTYAEDLAKAIVKI----MANDDR 203
Query: 239 MQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
++ + + S A + + G + + PV+ + PA +D TK+
Sbjct: 204 VEHEGIYHYSNAGVCSWYDFAVEIVRLSGLNCR-VNPVTTAEYPTKTHRPAYSVLDKTKI 262
Query: 297 VQTLNIDPVTYKDGVKLTLA 316
T ++ +++ ++ +
Sbjct: 263 KHTFGVEVPEWQEALRRMMG 282
>gi|94264208|ref|ZP_01288004.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1]
gi|93455383|gb|EAT05584.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1]
Length = 290
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 44/324 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
RVL+ G G LG+ L L P +A ++D+
Sbjct: 2 NRVLITGAGGQLGRELAARLG-----PEQLAVGRQ-------------------ELDIVD 37
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G A K P VVNCAA + E++P+ A +N VN L+ E+ + L
Sbjct: 38 GLAVKAF-FKAHHPVAVVNCAAYTAVDRAESEPEDAFLVN-EQGAVN-LAMAAESLDIPL 94
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V+ G KS Y E D AP++VYG+SK+A E+ + C ++R+ +Y
Sbjct: 95 IHISTDFVFAGRKSSPYVESDRPAPLSVYGRSKLAGERGVLAACPRSLVIRTGWLYAVHG 154
Query: 183 ISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQ 238
+ ++++VL ++ D+ P Y D+ +I L R L +K+
Sbjct: 155 RN---------FVNTVLYYARERGQLRVVADQVGSPTYTGDLAAVIAKILAARGLDGNKR 205
Query: 239 MQL--LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
M + + + A + EI +++PVS + P ++ +K+
Sbjct: 206 MATSRIFHYANEGVATWYDFACAIIEISNLPC-IVEPVSTQEYPTVARRPPYSVLNKSKI 264
Query: 297 VQTLNIDPVTYKDGVKLTLAAEAT 320
TL + ++ ++L +A+ +
Sbjct: 265 KDTLGLVIPGWRSSLELCMASRTS 288
>gi|67920275|ref|ZP_00513795.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH
8501]
gi|67857759|gb|EAM52998.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH
8501]
Length = 168
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG +L Q E + V ++++ L D+ +FV DV
Sbjct: 2 KKLLVTGASGFLGYNLCQYAQE----NWQVYGSYYNHKL-----DSKNINFVKVDV---- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ D + F Q PD V++ AA S P C+N+P+ + INV +S ++ +
Sbjct: 49 -TNIDELQTIFKQIKPDAVIHLAAASKPNYCQNNPEDSYKINVTAS--GNIAKLCADVNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK---FIYEKCSNFAILRSSIIY 178
+ STD V++G+ YKE D ++P++ YG+ KV AE+ IY K I R +++
Sbjct: 106 PCVFTSTDLVFDGLNPAYKESDPVSPISYYGEQKVKAEQEMLIIYPKT---VICRMPLMF 162
Query: 179 G 179
G
Sbjct: 163 G 163
>gi|296125191|ref|YP_003632443.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM
12563]
gi|296017007|gb|ADG70244.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM
12563]
Length = 276
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 136/309 (44%), Gaps = 48/309 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++GGTG LG +++ I K YDV T+ + + F + D
Sbjct: 2 KKILILGGTGMLGNTVVRHF--INNKNYDVHFTYRNEKVA------------FDNFDKNK 47
Query: 64 GSGFDAVALKFGQPD----VVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTE 117
G FD++ + V+NC + P + N DS IN P + NW
Sbjct: 48 GIKFDSLTDNINNLNKDFNYVINCIGIIKPFMFNNMRDSIF-INSIFPWNAANWCKE--- 103
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
K IH++TD V++G+K Y E DE ++ YGKSK E KC ILR+SII
Sbjct: 104 -KNIKFIHITTDCVFDGLKGKYNELDEHNALDEYGKSKSLGEP--RGKC---MILRTSII 157
Query: 178 YGPQTISPVPKSLP-IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
G + + K+ I W S KG+ V F + + + I + L E+
Sbjct: 158 -GEE----IHKNASLICWAKS--QKGKSVNGFLNHFWNGITTKQYATICEQIIENNLYEE 210
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSL-IKP-VSASSVDRGVQSPADI--SMD 292
L ++ D VS+ QM E E Y +L IKP ++ DR + S ++ +D
Sbjct: 211 D----LFHIHSKDIVSKYQMLEYFNE--KYDLNLKIKPYITNPICDRSLSSIKELCCKLD 264
Query: 293 ITKLVQTLN 301
I + + +N
Sbjct: 265 IPTVKEQIN 273
>gi|114566267|ref|YP_753421.1| carbohydrate oxidoreductase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337202|gb|ABI68050.1| carbohydrate oxidoreductase, putative [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 302
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
+ K RVL++GGTG LG L S++ +P DV AT S+ + A S + V
Sbjct: 12 LMKTRVLILGGTGMLGHTLF---SQLMLEPNLDVYATARSSEGLKEWFPADMVSKIRIGV 68
Query: 60 DLKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D FD V AL QPDVV+NC L +DP SA+++N S L + +S
Sbjct: 69 D---ADNFDTVIRALASIQPDVVINCIGLIKQLPISSDPLSAITVN--SLLPHRISLVCR 123
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LIH+STD V+ G K Y E+D ++YG+SK E Y C +R+SII
Sbjct: 124 TAGARLIHISTDCVFNGSKGNYTEQDPSDAQDLYGRSKFLGE-VSYPHC---VTIRTSII 179
>gi|209526054|ref|ZP_03274587.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|209493580|gb|EDZ93902.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
Length = 292
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 QPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG---VT 216
Query: 252 SRVQMAEVV---AEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
S A + A++ G + + P++ + + PA ++ KL L P
Sbjct: 217 SWYDFAIAIFEEAKLLGLPLKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQ 276
Query: 307 YKDGVKLTL 315
++ G++ L
Sbjct: 277 WRSGLRTML 285
>gi|160945704|ref|ZP_02092930.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii
M21/2]
gi|158443435|gb|EDP20440.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
M21/2]
gi|295103179|emb|CBL00723.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
SL3/3]
Length = 305
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG LL+ L E P+P+ LL+A ++D+ +
Sbjct: 2 KIIVTGCKGQLGTELLKQLQE---------GRSELGPIPEKLLNATVIPVDLPELDISNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PD+++NCAA + CE D A N P +L + E
Sbjct: 53 RMVDEF-VRRNRPDIIINCAAYTNVDGCEVHHDDAFKANALGPRNL----AQAAEKTGAR 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGIPQDEATLPGPISAYGSTKLMGEKYVERFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ IL L
Sbjct: 167 ----SYYGKNF-VKTIVNAGKKFGKLEVVNDQCGNPTNAADLAHEILQL 210
>gi|374610684|ref|ZP_09683475.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tusciae JS617]
gi|373550559|gb|EHP77201.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tusciae JS617]
Length = 256
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 70 VALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHL 126
A +F +P DVV+NCAA + E+D A ++N P+++ + + IH+
Sbjct: 16 AAERFIEPGDVVINCAAYTKVDAAESDEARAHAVNAVGPANIAQACARAGAD----FIHI 71
Query: 127 STDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY----GPQ 181
STD V++G K Y+ +DE P VYG++K+A E + + I+R++ +Y G
Sbjct: 72 STDYVFDGAKGRPYEIDDETGPQGVYGRTKLAGEFSVLAAMPDAHIVRTAWVYEGGDGGD 131
Query: 182 TISPVPKSLPIQWIDSVLSKGEK-VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ + + L+ G++ V+ D+ P Y D+V +L + +SE
Sbjct: 132 FVAVMRR----------LAAGDQPVDVVADQIGSPTYAADLVGALLEVAEGNISEP---- 177
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVS 275
LL+ VSR + A+ V E G + ++PV
Sbjct: 178 -LLHAANGGEVSRYEQAQAVFEAVGADPARVRPVG 211
>gi|299742513|ref|XP_001832535.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea
okayama7#130]
gi|298405218|gb|EAU89284.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea
okayama7#130]
Length = 300
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 68 DAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+AV KF + PD V++CAA P V E DP + +N + LS ++ L++
Sbjct: 48 EAVEKKFSEFKPDWVIHCAAERRPDVAEKDPAACKILN--EGVPGHLSQLSKQLGFTLVY 105
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTIS 184
+STD V++G Y+ P+N+YG +K E + + + +LR ++YGP +
Sbjct: 106 ISTDYVFDGQAPPYQPSSPTNPLNLYGVTKRDGEVAVLGVEGAKTIVLRVPVLYGP---A 162
Query: 185 PVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
P + + V+ G++ + HD R P V D+ K ++ L+ + K + +
Sbjct: 163 PKNSDSAVNILVDVVQDQSGKQYKMDHDATRYPTNVLDIAKFLVRLS----ALKKPVPSI 218
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISMDITKLVQTLN 301
L+ + ++ +M + A+I G I PV+ G S P D +D T+ + L
Sbjct: 219 LHYSAHEPFTKYEMCLIFAKILGLPHGHIVPVTHPPPGPGTASRPRDCHLD-TRETEALG 277
Query: 302 ID 303
++
Sbjct: 278 VE 279
>gi|398788405|ref|ZP_10550564.1| methionine adenosyltransferase [Streptomyces auratus AGR0001]
gi|396992228|gb|EJJ03342.1| methionine adenosyltransferase [Streptomyces auratus AGR0001]
Length = 278
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 43/261 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G +GY+G L Q LS + V T +P L+ VDL+
Sbjct: 2 KILLLGASGYVGGALWQSLS----ARHTVVGTCSRRAVPGLV-----------TVDLRDE 46
Query: 65 SGFDAVALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ GQ D+V++ A L E P A ++NV S V L + + +
Sbjct: 47 AALCAL---LGQGFDLVIHAAGLVDLASAEAQPALAHALNVRS--VEALRTAVRDTPTKI 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ LS+D V++G Y EED +PVNVYG++K AAE + + ++R ++YG
Sbjct: 102 LLLSSDNVFDGTGEVYTEEDPRSPVNVYGRTKCAAEDALLGPGGHL-VVRIPLVYGR--- 157
Query: 184 SPVPKSLPIQWIDSVLSK--GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP W D +++ G + D PVY+ + + L +R Q
Sbjct: 158 SP--------WADRFMARFSGPVTQAQTDVVCAPVYLPSLAPALEELWDR--------QG 201
Query: 242 LLNVGGPDRVSRVQMAEVVAE 262
LL+ G + V+R + VAE
Sbjct: 202 LLHFAGAEVVTRFALMSRVAE 222
>gi|120555541|ref|YP_959892.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8]
gi|120325390|gb|ABM19705.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8]
Length = 295
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 43/322 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G LL+ L+ PL Q++ D DL S
Sbjct: 2 KILVTGSDGQVGHELLKTLA----------------PLGQVI------GVTRKDADLASE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
A+ L PDVVVN AA + E + D+A ++N P + W + + L
Sbjct: 40 KEVAAL-LARHNPDVVVNPAAYTAVDKAETEQDAAYALNERAPELMAAWCHA----QNRL 94
Query: 123 LIHLSTDQVYEGVKSFYK-EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD VY G + E P +VYGKSK+A ++ + + I R+S +YG +
Sbjct: 95 LVHYSTDYVYPGTGDAAQMETTPTGPASVYGKSKLAGDEAVLREAPEALIFRTSWVYGAR 154
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L + ++ ++ D+ P + ++ L+ +
Sbjct: 155 GRNFMLTMLKLA------AEKSRLTVVADQVGAPTPAWLIAQVTAIAVRERLAGRADISG 208
Query: 242 LLNVGGPDRVSRVQMA-EVVAEIRGYSTSL------IKPVSASSVDRGVQSPADISMDIT 294
+ ++ S A E+VA R +L + P+ + PA+ +D++
Sbjct: 209 VFHLTCRGAASWCDFAREIVARARSAGRTLAMDENQVYPIPTTDYPAPAPRPANSRLDVS 268
Query: 295 KLVQTLNIDPVTYKDGVKLTLA 316
+L Q L + ++ + +TLA
Sbjct: 269 RLEQALGLTLPQWQSALSITLA 290
>gi|148360589|ref|YP_001251796.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
str. Corby]
gi|296106345|ref|YP_003618045.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
2300/99 Alcoy]
gi|148282362|gb|ABQ56450.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
str. Corby]
gi|295648246|gb|ADG24093.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
2300/99 Alcoy]
gi|401779796|emb|CCK73805.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
gi|401779827|emb|CCK73835.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
Length = 294
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 14/240 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +N + V L ++ K LIHLSTD V++G
Sbjct: 51 KPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCHLVNYCSLKNIPLIHLSTDYVFDGE 108
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D PV+ YG++K E+ I + + ILR S ++G Q + V L
Sbjct: 109 KEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTIL---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++ S +++ D+ P RD+ +++ + + L + G +
Sbjct: 165 --NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKIRHSSFDYWGLYHYAGQGVTNWH 222
Query: 255 QMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
+ A V + L + P+ + P + +D TK+ L I ++K+
Sbjct: 223 EFANVFLNMAKEKQLLLTLTDLNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCSWKN 282
>gi|147921183|ref|YP_685006.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
gi|110620402|emb|CAJ35680.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
Length = 264
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ PD V+N AA + CE++ + A +IN +L+ + L+H STD
Sbjct: 46 AIRKAAPDAVINAAAYTNVDGCEDEQEKAYAINGLGPA--YLAEACKEVGATLVHYSTDY 103
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
V++G + Y+E D P++VYGKSK+A EK + ++ I+R+S ++G +
Sbjct: 104 VFDGSRPEYRESDATNPISVYGKSKLAGEKNVQYNMDDYRIVRTSWLFGRHGKN------ 157
Query: 191 PIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVK 223
++D++LS ++ V+ +D+ P Y D+ +
Sbjct: 158 ---FVDTILSLSKQMPTVKVVNDQVGKPTYTVDLAE 190
>gi|115360828|ref|YP_777965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD]
gi|115286156|gb|ABI91631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD]
Length = 317
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+S +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 4 VSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 61
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 62 ------LDQPALEQLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 113
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 114 ARYGAWTLGISTDYVFDGKDAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 173
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV ++I LT R L
Sbjct: 174 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHL 232
Query: 234 S 234
+
Sbjct: 233 A 233
>gi|86357151|ref|YP_469043.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CFN 42]
gi|86281253|gb|ABC90316.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42]
Length = 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A + DV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSALRADVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED P++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATGPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ + ++
Sbjct: 155 --FGNNFLKTMLRLAETRDHLRVVADQTGCPTSALDIADAILAIATRIITDPEPSLRGTF 212
Query: 244 NVGGPDRVSRVQMA-EVVAEI--RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTL 300
++ G S A E+ AE+ G + ++ + + + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAELLKSGGRSVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 301 NIDPVTYKDGVKLTL 315
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|345515048|ref|ZP_08794554.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei 5_1_36/D4]
gi|423239429|ref|ZP_17220545.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
gi|229434521|gb|EEO44598.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei 5_1_36/D4]
gi|392646699|gb|EIY40412.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
Length = 286
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 52 HSFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV 109
+ ++F DV+ + AV LK Q DV+VNCAA + V + D AM+ + + V
Sbjct: 25 NRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAAYT--NVDRAEDDFAMADLLNNKAV 82
Query: 110 NWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
L+ LIH+STD V+ G K+ +E E P+ VYGK+K+A E+ + +
Sbjct: 83 ENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETDPLGVYGKTKLAGEQSLVKAGCK 142
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ I R++ +Y SP K+ ++ + + S + ++ D+ P Y D+ +I +
Sbjct: 143 YLIFRTAWLY-----SPFGKNF-VKTMRQLTSTKDSLKVVFDQVGTPTYAGDLAALIYNI 196
Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
L + + + N G S A+ + E+ G + I+P + V+ P
Sbjct: 197 IEENLLDRQGVYHFSNEG---VCSWYDFAKEICELSGNNCD-IQPCHSDEFPSKVERPHF 252
Query: 289 ISMDITKLVQTLNIDPVTYKDGVK 312
+D TK+ +T I +KD +K
Sbjct: 253 SVLDKTKVKETFGITIPYWKDSLK 276
>gi|16519749|ref|NP_443869.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium fredii NGR234]
gi|2500165|sp|P55463.1|RMLD_RHISN RecName: Full=Probable dTDP-4-dehydrorhamnose reductase; AltName:
Full=dTDP-4-keto-L-rhamnose reductase; AltName:
Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName:
Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName:
Full=dTDP-L-rhamnose synthase
gi|2182409|gb|AAB91681.1| dTDP-4-dehydrorhamnose reductase RmlD [Sinorhizobium fredii NGR234]
Length = 296
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A +++ PD++V+ AA + E++P A ++N V L+ +IHLST
Sbjct: 43 ASSIRDAAPDIIVSLAAYTAVDKAESEPYEAFAVNRDG--VQALAEAAAGLGVPVIHLST 100
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y EED P++VYG+SK+ E + N ILR+S +Y + V
Sbjct: 101 DYVFDGAKPVPYCEEDRTGPISVYGRSKLEGEFAVASANPNHTILRTSWVYSRYGQNFVK 160
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK-QMQLLLNVG 246
K L + +++ D+ CP D+ ++ + R LS ++ + ++
Sbjct: 161 KMLRLA------DTNDELNVVADQLGCPTSADDISVAVMTIARRMLSSSSADLRGIFHLS 214
Query: 247 GPDRVSRVQMAE----VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
G S A+ V EI G + +SA+ + PA+ + KL +T I
Sbjct: 215 GSGEASWAAFAKYVFSVYDEITGRQIK-VHDISAAEYPTPARRPANSRLHCDKLERTFGI 273
>gi|291547964|emb|CBL21072.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5]
Length = 283
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG +PDV++NC ++ CE +P+ A +N + LS ++ LST
Sbjct: 45 INFGSINRPDVIINCTGITDTDECEKNPEHAYRVNALGARN--LSIVARKCGAKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG+SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGKSKKPYTEFDDTNPLTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ L KG+ + D+ P +D+ ++IL L
Sbjct: 163 RVL------ETAEKGQALSVASDQFGSPTSAKDLARMILYL 197
>gi|319953123|ref|YP_004164390.1| dtdp-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237]
gi|319421783|gb|ADV48892.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237]
Length = 295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 20/244 (8%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK- 136
D +NCAA + E+D ++A +N V +L+ ++ E +LIH+STD V++G K
Sbjct: 58 DYCINCAAYTAVDKAEDDKENAFLVNAEG--VKFLAKACKSFETVLIHISTDFVFDGTKN 115
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
S Y E D P+NVYG SK+ E++I N+ I+R+S +Y ++
Sbjct: 116 SPYTENDITNPINVYGASKLKGEEYIKNILENYFIIRTSWVYS---------EFGNNFVK 166
Query: 197 SVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
++L G+ + D+ P + D+ ++IL + + + + N +S
Sbjct: 167 TMLKLGKDRNNLSVVDDQIGSPTFAEDLARLILEI----IDSNSLEYGIHNFSNDGEISW 222
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 313
+ A+ + + S L KP+ +S + P + K+ L+ + +K+ +K
Sbjct: 223 YEFAQEIFQESKISIEL-KPLKSSEYPTKAKRPKYSVLSKLKIRNALSTEIPLWKNSLKK 281
Query: 314 TLAA 317
L +
Sbjct: 282 CLVS 285
>gi|52840994|ref|YP_094793.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296784|ref|YP_123153.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str.
Paris]
gi|6688598|emb|CAB65207.1| RmlD protein [Legionella pneumophila]
gi|52628105|gb|AAU26846.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53750569|emb|CAH11971.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str.
Paris]
Length = 294
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 40/313 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E + Y A T D+
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSEHEVY--ACTR----------------------DILDC 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + V L +PD+++N AA + E++PD A +N + V L ++ K
Sbjct: 38 SKLERVHDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCRLVNYCTLKNVP 95
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 96 LIHLSTDYVFDGEKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQ 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ V L ++ S +++ D+ P RD+ +++ + +
Sbjct: 156 GKNFVKTIL------NLASSRKELNIVSDQSGRPTSARDIARVLFEIVQKIRHSSFDYWG 209
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSL-----IKPVSASSVDRGVQSPADISMDITKL 296
L + G + + A V + L + P+ + P + +D TK+
Sbjct: 210 LYHYAGQGVTNWHEFANVFLNMAKEKQLLLTLTDLNPIKSQEYPTRATRPKNSVLDTTKI 269
Query: 297 VQTLNIDPVTYKD 309
L I ++K+
Sbjct: 270 ETILGIKSCSWKN 282
>gi|332294914|ref|YP_004436837.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM
14796]
gi|332178017|gb|AEE13706.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM
14796]
Length = 277
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 14/136 (10%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLST 128
A+K PDVV+NCAA ++ E++ ++A +N P +L + F +L+H ST
Sbjct: 46 AIKKSMPDVVLNCAAYNLVDKAESNWEAAYRVNALGPRNLAVLSNEFNY----ILVHFST 101
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++GVKS Y DE P++VYG+SK++ E+ I CS + ++R+S ++G P
Sbjct: 102 DYVFDGVKSKPYLIYDEPNPISVYGRSKLSGEREISSLCSKYYVIRTSWVFGDG-----P 156
Query: 188 KSLPIQWIDSVLSKGE 203
S P + I+ SKG+
Sbjct: 157 NSFPRKLIE--WSKGK 170
>gi|399026876|ref|ZP_10728514.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium sp. CF136]
gi|398075640|gb|EJL66746.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium sp. CF136]
Length = 281
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G G LG LL + +T +S + +VF D +
Sbjct: 2 EKILVTGANGQLGSELL------------ILSTKYSN-----------YEWVFADRTQIT 38
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + + +P++++NC A + E++ + A ++N S V ++ +
Sbjct: 39 LDDLEVLEKQLNDIRPEIILNCGAYTAVDKAESEKEIAFTVNY--SAVELIAKYAFKNNV 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V++G S EE + P+N+YG SK A E + N I+R+S +Y
Sbjct: 97 KLIHISTDYVFDGSSSIALSEEAQTNPINIYGASKRAGEVACLNENPNSIIIRTSWVY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN--RWLSEDKQ 238
S + ++ + ++ + E + +D+ P Y D+ + +L + W+
Sbjct: 155 ---SKFGNNF-VKTMQRLMKEKESINVVNDQIGSPTYAADLAQAMLDIIKSPNWIPG--- 207
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ N +S + A + E+ GYS + + + ++S + P +D K+
Sbjct: 208 ---IYNYSNEGEISWYEFALSIKELGGYSCN-VGGIPSASYPTPAKRPEFSLLDKKKIKI 263
Query: 299 TLNIDPVTYKDGVK 312
N+D YK+ ++
Sbjct: 264 IYNLDVPDYKESLR 277
>gi|418401112|ref|ZP_12974645.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti
CCNWSX0020]
gi|359504902|gb|EHK77431.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti
CCNWSX0020]
Length = 275
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 13/250 (5%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ +PD+VV+ AA + E++P++A ++N + + E ++H+STD
Sbjct: 22 AIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGAV--ADAAACLEVPIVHISTDY 79
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K Y E D AP++VYG SK+A E + E ILR+ +Y SP K+
Sbjct: 80 VFDGSKQGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHLILRTGWVY-----SPFGKN 134
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGP 248
++ I + + E++ D+ P D+ IL ++ R + D+ L ++ G
Sbjct: 135 F-VKTILRLAEEREEIAVVADQRGNPSSAIDLADAILDISARLTTSDQDAAFGLYHLAGS 193
Query: 249 DRVSRVQMAE---VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
VSR +A + G + ++ ++ + PA+ S+ K
Sbjct: 194 GVVSRADLARHALAASRAEGGPWAHVRDIATGAFPTPASRPANSSLSSAKFTAAFGRAMP 253
Query: 306 TYKDGVKLTL 315
+++ V+ T+
Sbjct: 254 AWQNSVERTV 263
>gi|413958741|ref|ZP_11397980.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
gi|413941321|gb|EKS73281.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
Length = 303
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 27/258 (10%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D A ++N + V L+ + + LL+H STD V++G
Sbjct: 56 KPDVIVNPAAYTAVDQAEADVQIARAVNALAPAV--LAEEAKRLDALLVHYSTDYVFDGT 113
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+EED AP NVYG +K+ E+ + + I R+S +YG + + + L +Q
Sbjct: 114 GTRAYREEDATAPQNVYGATKLEGEQAVVTSGAAHFIFRTSWVYGRRGRNFL---LTMQ- 169
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------------WLSEDKQMQ 240
+ + +++ D+ P + + + ++ + W E + +
Sbjct: 170 --KLARERDELRIVADQIGAPTWSATIAALTASVIAQGVAQGVGSGSSIADWARERRGVY 227
Query: 241 LLLNVGGPDRVSRVQMAEVV-AEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
L + G S AE + AE R + P+ ++ + P++ +D++KL +
Sbjct: 228 HLTSSGS---TSWAGFAEAIFAEARLEHPPRVVPIPSAEYPTPARRPSNSRLDLSKLARE 284
Query: 300 LNIDPVTYKDGVKLTLAA 317
+ P +++ + L L +
Sbjct: 285 FGLTPPDWREALALCLGS 302
>gi|338214077|ref|YP_004658134.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
gi|336307900|gb|AEI51002.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
Length = 287
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 20/245 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+NCAA + E++ D A +IN + ++ +LIH+STD V+EG
Sbjct: 52 RPRYVINCAAYTAVDKAEDETDLAAAINRTGA--ENVAIACRAVGAVLIHISTDFVFEGN 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ + E D PV+VYG +K+ E+ I + ILR+S +Y +
Sbjct: 110 RPALLNENDPAEPVSVYGLTKLQGEQAIAGQLPEHFILRTSWLYS---------EFANNF 160
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E++ D+ P Y D+ + IL + +S + + +
Sbjct: 161 VKTMLRLGKDREELGVIVDQVGSPTYAIDLAEAILTI----ISSESTAYGTYHYSNEGAI 216
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
S A+ + E+ YS +KP+ S + PA MD +++ +TL+I +KD +
Sbjct: 217 SWYDFAKTIFELAHYSVR-VKPLKTSEYPTKARRPAFSVMDKSRIKETLSISVPYWKDSL 275
Query: 312 KLTLA 316
K L+
Sbjct: 276 KACLS 280
>gi|317503438|ref|ZP_07961477.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606]
gi|315665449|gb|EFV05077.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606]
Length = 290
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 65 SGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ DA+ Q DV ++NCAA + E D +N P +L + E
Sbjct: 42 TNLDAIRQMVAQLDVKCIINCAAWTNVDAAETAGDIVEQLNAKAPENLAMAMKEV----E 97
Query: 121 NLLIHLSTDQVYEG--VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H+STD V+ G + +E+ + +P VYG++K+ E+ I I+R++ +Y
Sbjct: 98 GLLVHISTDYVFGGDPYNTPCREDQKGSPTGVYGQTKLHGEQRILATGVKHIIIRTAWLY 157
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-ALTNRWLSEDK 237
S K+ ++ + S+ + +++ D+C P Y D+ +I + NR ++
Sbjct: 158 -----SEFGKNF-VKTMLSLTATKPQLKVVFDQCGTPTYAGDLADVIYDIIENRKFDNNE 211
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ N G S +V+A++ G++T I+P + V+ PA +D +K+
Sbjct: 212 GIYHFSNEG---VCSWYDFTKVIAQMAGHTTCDIQPCHSDEFPSPVKRPAYSVLDKSKIK 268
Query: 298 QTLNIDPVTYKDGVKLTLAA 317
T I + D ++ +AA
Sbjct: 269 DTFGITIPYWTDSLRKCIAA 288
>gi|16357462|gb|AAL18014.1| dTDP-dehydrorhamnose reductase [Aneurinibacillus thermoaerophilus]
Length = 282
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV++ AA + + E + ++A +N + ++ E L+++STD V++G
Sbjct: 51 QPDVVIHAAAYTKVDLAETEVNTAYKVNALGT--RNVAVAAEACRAKLVYISTDYVFDGQ 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E P ++YGKSK+A E F+ + CS F I+R+S +YG + V L +
Sbjct: 109 AAGPYHEFAPTNPQSIYGKSKLAGESFVQQLCSRFFIVRTSWVYGKYGHNFVKTMLRL-- 166
Query: 195 IDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILAL 228
GE+ E HD+ CP Y D+ +L L
Sbjct: 167 ------AGERDELNVVHDQVGCPTYTVDLAAFVLNL 196
>gi|332880173|ref|ZP_08447855.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357045781|ref|ZP_09107413.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella clara YIT 11840]
gi|332681932|gb|EGJ54847.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355531304|gb|EHH00705.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella clara YIT 11840]
Length = 295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 129/316 (40%), Gaps = 49/316 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LG + QLL P F +F D+K
Sbjct: 11 KNILVTGCNGQLGNEM------------------------QLLAAGHP-EFNYFFTDVKE 45
Query: 64 GSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D A+K + D +VNCAA + V + + D A + + +L+ +
Sbjct: 46 LDITDEKAVKSFVGMHEIDCIVNCAAYTA--VDKAESDEAFCDLLNHTAPGYLAKAVHER 103
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+I +STD V++G Y+EE+ P YG++K+A E+ + C ++R++ +Y
Sbjct: 104 GGCMIQVSTDYVFDGTAHIPYREEEPTCPATAYGRTKLAGEEAVMRNCPESVVIRTAWLY 163
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVE---FFHDECRCPVYVRDVVKIILALTNRWLSE 235
+ ++ ++L G + E D+ P Y RD+ I A+ L++
Sbjct: 164 S---------TFGNNFVKTMLRLGREKESLGVIFDQIGTPTYARDLAVAIFAV----LTQ 210
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
D + + + +S + + I +T ++P+ P +D TK
Sbjct: 211 DF-VPGIYHFSNEGAISWYDFTKAIHRIADITTCKVRPLHTEEYPAPAARPHYSVLDKTK 269
Query: 296 LVQTLNIDPVTYKDGV 311
+ +T +ID ++D +
Sbjct: 270 IKETYHIDIPYWEDSL 285
>gi|239628292|ref|ZP_04671323.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518438|gb|EEQ58304.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 297
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 46 LLDALPHSFVFFDVD----LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMS 101
LL + P + DVD SG + + +P ++NCA L+ C+ +P+ A
Sbjct: 20 LLRSEPVELLLTDVDSVDITVSGDVMEYAGMN--RPHFIINCAGLTDLARCQREPELAFK 77
Query: 102 INVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEK 160
+N + LS + L+ STD V++G + Y E D P +YGKSK+A E
Sbjct: 78 VNALGARN--LSVAARMGKARLVQFSTDDVFDGDSREPYTEFDTPGPQTIYGKSKLAGEN 135
Query: 161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVY 217
F+ E CS I+RSS I+G SP ++ +L E+ + H D+ P
Sbjct: 136 FVREFCSRHIIIRSSWIFGAG--SP--------YLGQILRMAEQGQVIHAAADQYAAPTG 185
Query: 218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK 272
++ + + L + ED L +V G SR + A + G +++
Sbjct: 186 AEELAEKTVELM--YHGEDG----LYHVTGQGSCSRYEFAREAVRLSGTGAPVMQ 234
>gi|426408299|ref|YP_007028398.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. UW4]
gi|426266516|gb|AFY18593.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. UW4]
Length = 289
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQAAFAINAIAPGI--LAEEALALDIPLIHYSTDYVFDGL 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D P+ VYGKSK+A E+ I + ILR+S +Y + + L +Q
Sbjct: 108 KAGPYNEDDTPNPLGVYGKSKLAGEQAIKDVQGKHLILRTSWVYSNHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + LAL W + + ++ S
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTLANSTLALIEHWQAREVANWGTYHLTAQGETSWF 221
Query: 255 QMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E +G + + P+ +S P + +D ++L + + ++ +
Sbjct: 222 GFAQAIGEALRQQGKPCAALLPIPSSDYPTPAARPLNSRLDCSRLQRDWGVSQPDWQTAL 281
Query: 312 KLTLAAE 318
+ L +
Sbjct: 282 RECLTEQ 288
>gi|365119316|ref|ZP_09337438.1| dTDP-4-dehydrorhamnose reductase [Tannerella sp. 6_1_58FAA_CT1]
gi|363648637|gb|EHL87791.1| dTDP-4-dehydrorhamnose reductase [Tannerella sp. 6_1_58FAA_CT1]
Length = 286
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G LG + + L+E + K ++F+F D+
Sbjct: 3 KILVTGANGQLGNEM-RCLAEEDKK----------------------NTFLFTDIQDLDI 39
Query: 65 SGFDAVALKF--GQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ +AV +K+ G +V+VNCAA + E++ D+ IN + ++ +
Sbjct: 40 TDLEAV-MKYVAGHGIEVIVNCAAYTAVDKAEDNEDTCRKINALAVANLAKAAAMNRAK- 97
Query: 122 LLIHLSTDQVYEGVKSFYK---EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+IH+STD VY GV +YK E DE AP +VYG +K+ E+ +++ CS+ +LR+S +Y
Sbjct: 98 -VIHISTDYVYSGV--YYKPYSESDETAPCSVYGVTKLEGERLLFDNCSDAVVLRTSWLY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ V + + + EK+ D+ P Y D+ K I+ + +
Sbjct: 155 SAYGNNFVKTMIRLG------KEREKLSVVFDQIGTPTYAGDLAKAIMII----IDNKTF 204
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + N S + + I T + P+ S P M+ K+ +
Sbjct: 205 IPGIYNFSNEGVCSWYDFTKAIHRIARIRTCEVLPIEGSEYPAKATRPFYSVMNKKKIKE 264
Query: 299 TLNI 302
T ++
Sbjct: 265 TYSV 268
>gi|322420910|ref|YP_004200133.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18]
gi|320127297|gb|ADW14857.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18]
Length = 277
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 17/241 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P VV+N AA + C+++P+ AM +N S V +L+ ++ L+ +STD +++G
Sbjct: 47 KPKVVINAAAYTDVDGCQSNPELAMQVN--SEGVGYLAMISKEIGAKLVQVSTDYIFDGK 104
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E+D P++VYG+SK+ E + N I+R+ +YG + V L +
Sbjct: 105 KGAPYLEDDLAGPLSVYGESKLGGEMNTWFN-PNHLIVRTQWLYGHGGKNFVETMLKLA- 162
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++ +++ D+ P + RD+ I AL DK Q + VS
Sbjct: 163 -----AEKKELTVVDDQIGSPTWTRDLALAIKALL------DKGCQGTYHAANSGFVSWN 211
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLT 314
A+ + + G +++ P++ + R P ++D KL Q P ++D ++
Sbjct: 212 GFAKEIFRLAGLDVAVL-PMTTEQLGRPAPRPLYSTLDCGKLQQETGFVPQPWQDALERY 270
Query: 315 L 315
L
Sbjct: 271 L 271
>gi|406927477|gb|EKD63505.1| hypothetical protein ACD_51C00268G0010 [uncultured bacterium]
Length = 274
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 42/294 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++G G LG L++ SE YDV A H D D+
Sbjct: 3 KKILILGAGGMLGADLVKAFSE----EYDVVAWTHK------------------DFDITD 40
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F+ + K PD+++N AA + E + D A IN S + LS + + +L
Sbjct: 41 SFSFNKI--KKLNPDIIINSAAYTAVDQAETERDKAFLIN--SEAIISLSRVADECDAVL 96
Query: 124 IHLSTDQVYEGVKS-FYKEED-EIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++ STD V+ G K+ Y E D +NVYG+SK E+ + K ++R+S ++G
Sbjct: 97 VNFSTDYVFSGEKNGGYVETDPPSGALNVYGRSKSKGEENL--KAKKHYLIRTSWLFGKN 154
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
K+ ID + +K ++++ D+ P Y D+ + + L +D
Sbjct: 155 G-----KNFVRTMID-LAAKNQELKIVADQIGKPTYTADLAQAVFDLM-----KDMPEFG 203
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITK 295
+ ++ D VS A+ + +I+G + PV+++ R P + +D TK
Sbjct: 204 IYHLVNEDAVSWCDFAKEIFKIKGIDVK-VTPVTSAEFVRPATRPKNSILDNTK 256
>gi|395801761|ref|ZP_10481016.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium sp. F52]
gi|395435950|gb|EJG01889.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium sp. F52]
Length = 284
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 142/316 (44%), Gaps = 47/316 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K++LV G TG LG L +L A P + ++F D +
Sbjct: 2 KKILVTGATGQLGSEL------------------------SVLAPAFPQYKWIFAD---R 34
Query: 63 SGSGFDAVALKFGQ-----PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
+ D + L Q PD++ N A + E++ + A IN + V ++ ++
Sbjct: 35 TKVTLDNLELLHSQLETINPDIIFNGGAYTAVDKAESEKELAFKINHLA--VELIAKYST 92
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
K+ LIH+STD V++G S EE E +P+NVYG+SK+A E ++ I+R+S
Sbjct: 93 EKKVKLIHISTDYVFDGASSIALNEEAETSPINVYGESKLAGEIACLKENPESIIIRTSW 152
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+Y S + ++ + ++ + +++ +D+ P Y D+ + ++ + +
Sbjct: 153 VY-----STFGNNF-VKTMQRLMQERDEINVVNDQIGSPTYAADLAQAMIDI----IGSA 202
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
K + + N +S + A + ++ GY+ ++ + +SS + P+ ++ K+
Sbjct: 203 KWIPGIYNYSNEGEISWYKFALSIKKLGGYNCKVVG-IPSSSYPTPAKRPSYSLLNKEKI 261
Query: 297 VQTLNIDPVTYKDGVK 312
N++ YK +K
Sbjct: 262 KTVYNLNIPGYKKSLK 277
>gi|381186210|ref|ZP_09893782.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium frigoris PS1]
gi|379651645|gb|EIA10208.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium frigoris PS1]
Length = 282
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 43/314 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+++V G TG LG L V + ++S F +F D
Sbjct: 2 KKIVVTGATGQLGSEL------------KVLSENYS-------------QFEWFFADRTQ 36
Query: 64 GSGFDAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
S + LK QPDV+++C A + E +P+ A IN S V ++ + ++
Sbjct: 37 VSLDNLAVLKVQLESIQPDVILSCGAYTAVDKAETEPELADIINHQS--VKIIAQYAKDN 94
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ LIH+STD V++G S +ED I P+N+YG +K+A E + I+R+S +Y
Sbjct: 95 KVKLIHISTDYVFDGSSSVALKEDAITNPINMYGATKIAGELAVMAVNPEAVIIRTSWVY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
S + ++ + +L + + + +D+ P Y D+ + ++ + N K
Sbjct: 155 -----SRFGNNF-VKTMQRLLKERDTLGVVNDQIGSPTYAADLAQAMMDILNN----GKW 204
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ + N +S + + EI GY T + + +SS + PA +D +K+
Sbjct: 205 IPGIYNYSNEGEISWYEFVLAIQEIGGY-TCEVTGIPSSSYPTPAKRPAFSLLDKSKIKA 263
Query: 299 TLNIDPVTYKDGVK 312
+ YK+ ++
Sbjct: 264 IYGVVVPGYKESLR 277
>gi|451335358|ref|ZP_21905926.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis azurea DSM 43854]
gi|449422144|gb|EMD27529.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis azurea DSM 43854]
Length = 285
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A G VV+N AA + E D + A ++N V L++ ++ LIH+STD
Sbjct: 46 ARAAGTSPVVINAAAYTAVDAAEADEERAFAVNADGPRV--LAAACSSRGVPLIHVSTDY 103
Query: 131 VYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V+ G S Y+ D + P+N YG++K A E + + I+R+S +YG +T S K+
Sbjct: 104 VFSGDATSPYEVTDLLGPLNAYGRTKAAGEDAVLGSGARSWIVRTSWVYG-KTGSNFVKT 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD 249
+ + + E++ D+ P + RD+ +L L R + D Q +L+ G
Sbjct: 163 MA-----RLEKEREELSVVDDQTGSPTWSRDLAAGLLELAGRVAAGDGPSQRVLHCTGGG 217
Query: 250 RVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
+ A+ + G + +KP + + R + PA
Sbjct: 218 STTWCGFAQAIFAELGADPARVKPCTTAEFPRPAKRPA 255
>gi|389851925|ref|YP_006354159.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus sp. ST04]
gi|388249231|gb|AFK22084.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus sp. ST04]
Length = 288
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 136/313 (43%), Gaps = 33/313 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G TG LG +++ S+ L + +P S DVD+
Sbjct: 2 KVAVIGATGQLGSDIVEVFSK------------------DLTFEVIPLSHR--DVDVTVL 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L+ +PDVV+N AA E P+ A +N +L ++ E + +
Sbjct: 42 ESLKV--LERIKPDVVINTAAYVRVDDAELHPEEAFRVNAIGALN--VAKIAEKINAINV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y E+D P+NVYG SK E F S I+R + +YG +
Sbjct: 98 YISTDYVFDGEKGKPYTEDDIPNPINVYGVSKYVGEIFTRNYSSRHYIIRVASLYGKKGA 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ ++W+ K EK+ D+ P Y +DV + + + + +
Sbjct: 158 RGKGGNF-VEWVIERAKKEEKLRVVSDQFMSPTYTKDVAAGLAKFLK--IMPEYGVYHMT 214
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G S + + EI G+ ++P+S++ ++R + P ++ + KL + I
Sbjct: 215 NDGF---CSWYEFTRAIFEILGWDVE-VEPISSTELNRLAKRPKFSALSVKKL-GNIGIK 269
Query: 304 PVTYKDGVKLTLA 316
+K+ +K LA
Sbjct: 270 MRHWKEALKDYLA 282
>gi|225848196|ref|YP_002728359.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643418|gb|ACN98468.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 281
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+VV+NC+A ++ E + A +N + + L + + LIH STD V++G
Sbjct: 51 KPNVVINCSAYNLVDKAEEEFKEAFEVNAFA--IKNLGLLCQEYKCFLIHYSTDYVFDGT 108
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K FY EED P+++Y KSK A EKFI E ++ I R S +YG + + K
Sbjct: 109 KQDFYTEEDLPNPLSIYAKSKYAGEKFIKETLEHYLIFRVSWVYGKGKQNFLYK------ 162
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
++ + ++ DE P R +V+I L + L+ L ++ SR
Sbjct: 163 LNQWAATHSMLKIAVDEFSVPTSTRTIVEITLKALKQGLTG------LYHLTNSGYASRY 216
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 313
+ ++ +++ LI P S + + P M K+ + LN D + + +KL
Sbjct: 217 EWSKEYLKLKQ-VDKLIYPAYQSDFNLPAKRPKWSVMSNQKISKILNTDIPLWNEELKL 274
>gi|357009983|ref|ZP_09074982.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus elgii B69]
Length = 284
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 36/288 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+ V G +G LG L+ S ++ K Y+V T ++D+
Sbjct: 3 IFVTGASGQLGTDLV---SLLKTKGYEVFGTSSK------------------ELDITDTH 41
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ + QP+++++ AA + E D D A +IN + +++ + LI+
Sbjct: 42 AVKSLIAEDKQPNIIIHSAAYTKVDQAEQDSDEAYAINAYGTRNVAMAARACGAK--LIY 99
Query: 126 LSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G K Y E ++P +VYGKSK+A E+F+ E ILR+S ++G +
Sbjct: 100 ISTDYVFDGTSKVPYNEFAPVSPQSVYGKSKLAGEQFVREWVPQHYILRTSWVFGKHGSN 159
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V L + ++ HD+ P Y D+ + IL L DK++ +
Sbjct: 160 FVSTMLKLA------EDRTQLNVVHDQFGSPTYTVDLAEFILQLF------DKELYGTYH 207
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
V S + ++ + G + PV+ R PA MD
Sbjct: 208 VSNTGICSWYEFSKEIFYQAGLQHMEVNPVTTLEFPRPAPRPAYSVMD 255
>gi|374586688|ref|ZP_09659780.1| dTDP-4-dehydrorhamnose reductase [Leptonema illini DSM 21528]
gi|373875549|gb|EHQ07543.1| dTDP-4-dehydrorhamnose reductase [Leptonema illini DSM 21528]
Length = 286
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 49/308 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-V 59
MSK VLV GG+G LG+ L Q+ D H+FVF D
Sbjct: 1 MSK--VLVTGGSGQLGRELRLK--------------------AQIFHD---HTFVFTDRS 35
Query: 60 DLKSGSGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+L F ++ +P V+NCAA + E+D D+AMS+N S ++
Sbjct: 36 ELNIADAFQVRQVVERERPSCVINCAAYTAVDRAESDIDAAMSVN--HSGAELCAAEARR 93
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
IH+STD V++G KS Y E+D +P+ VYG SK E+ + + + I+R+S +
Sbjct: 94 IGARFIHISTDFVFDGKKSTPYVEDDMTSPLGVYGLSKREGERAVLDAHPDACIIRTSWL 153
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
Y + ++ ++L G ++ D+ P + D ++L LS
Sbjct: 154 Y---------SAYGANFLKTMLRLGRERSEIGVIADQVGTPTWTADFADVLLQAVTADLS 204
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDIT 294
+ + S A + E+ G S ++P+ Q PA M+
Sbjct: 205 G------IFHYSNEGVASWYDFAIAIMELSGLSCD-VRPLETHEYPTPAQRPAYSIMNKR 257
Query: 295 KLVQTLNI 302
K+ LNI
Sbjct: 258 KIRSALNI 265
>gi|383320954|ref|YP_005381807.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324124|ref|YP_005384977.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490008|ref|YP_005407684.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435274|ref|YP_005649998.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|339272306|dbj|BAK48793.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|359270273|dbj|BAL27792.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273444|dbj|BAL30962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276614|dbj|BAL34131.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957082|dbj|BAM50322.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Bacillus subtilis BEST7613]
Length = 293
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 19/245 (7%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VN AA + E +P+ A ++N + ++ + ++H+STD V++G +
Sbjct: 53 PDIIVNSAAYTAVDRAETEPELAYAVNALAPQA--IAKVAKEIGAYVVHISTDYVFDGSQ 110
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y+E D P+ VYG+SK E I + NF I+R++ +YG K++
Sbjct: 111 SSPYRETDATNPLGVYGQSKFQGEIAIADSGCNFLIVRTAWVYGVHGSGNFVKTMV---- 166
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+ + +KV D+ P + +D+ + I ALT +++ Q + + S
Sbjct: 167 -RLGKERQKVRVVADQIGGPTWAKDLAEAIAALT------EQRAQGIYHYSNSGVASWYD 219
Query: 256 MA-EVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
A + E+ L + P++ ++ + PA + K+V+TL P ++
Sbjct: 220 FAVAIFEEVENLGIPLKVRQVVPIATAAYPTPARRPAYSVLSHQKIVETLGSAPPHWRAS 279
Query: 311 VKLTL 315
++ L
Sbjct: 280 LRAML 284
>gi|294775786|ref|ZP_06741288.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510]
gi|294450372|gb|EFG18870.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510]
Length = 286
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 52 HSFVFFDVDLKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV 109
+ ++F DV+ + AV LK Q DV+VNCAA + V + D AM+ + + V
Sbjct: 25 NRYLFTDVNELDITDATAVRNMLKKEQIDVIVNCAAYT--NVDRAEDDFAMADLLNNKAV 82
Query: 110 NWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
L+ LIH+STD V+ G K+ +E E P+ VYGK+K+A E+ + +
Sbjct: 83 ENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETDPLGVYGKTKLAGEQSLVKAGCK 142
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ I R++ +Y SP K+ ++ + + S + ++ D+ P Y D+ +I +
Sbjct: 143 YLIFRTAWLY-----SPFGKNF-VKTMRQLTSTKDSLKVVFDQVGTPTYAGDLAALIYNI 196
Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
L + + + N G S A+ + E+ G + I+P + V+ P
Sbjct: 197 IEENLLDRQGVYHFSNEG---VCSWYDFAKEICELSGNNCD-IQPCHSDEFPSKVERPHF 252
Query: 289 ISMDITKLVQTLNIDPVTYKDGVK 312
+D TK+ +T I +KD +K
Sbjct: 253 SVLDKTKVKETFGITIPYWKDSLK 276
>gi|186477067|ref|YP_001858537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
gi|184193526|gb|ACC71491.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
Length = 297
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 21/252 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++VN AA + E D D+AM IN + V L+ + L+H STD V++G
Sbjct: 56 KPVLIVNPAAYTAVDKAETDVDAAMRINAEAPSV--LAEEAKRLGAALVHYSTDYVFDGT 113
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P+NVYG+SK+ E+ I I R+S +YG + + + L +
Sbjct: 114 KDGAYVESDAVNPINVYGRSKLEGEQAIAAVGGAHMIFRTSWVYGTRGKNFLLTMLRLG- 172
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKI---ILALTN-----RWLSEDKQMQLLLNVG 246
++ E++ D+ P + + +LA +W E + L G
Sbjct: 173 -----AEREELSVVADQFGAPTWSNTIATSTAHVLAQATATDGEQWWREHSGV-YHLTAG 226
Query: 247 GPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
G S AE + E +KP+ AS+ P + SM KL +
Sbjct: 227 GV--TSWYGFAEAIFEFSSLQKKPAVKPIPASAYPTPASRPTNSSMSNDKLAAAFGVRAP 284
Query: 306 TYKDGVKLTLAA 317
+++ ++L +AA
Sbjct: 285 DWREALQLCMAA 296
>gi|16329215|ref|NP_439943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451813374|ref|YP_007449826.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|1651695|dbj|BAA16623.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451779343|gb|AGF50312.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 280
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 19/245 (7%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VN AA + E +P+ A ++N + ++ + ++H+STD V++G +
Sbjct: 40 PDIIVNSAAYTAVDRAETEPELAYAVNALAPQA--IAKVAKEIGAYVVHISTDYVFDGSQ 97
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y+E D P+ VYG+SK E I + NF I+R++ +YG K++
Sbjct: 98 SSPYRETDATNPLGVYGQSKFQGEIAIADSGCNFLIVRTAWVYGVHGSGNFVKTMV---- 153
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+ + +KV D+ P + +D+ + I ALT +++ Q + + S
Sbjct: 154 -RLGKERQKVRVVADQIGGPTWAKDLAEAIAALT------EQRAQGIYHYSNSGVASWYD 206
Query: 256 MA-EVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 310
A + E+ L + P++ ++ + PA + K+V+TL P ++
Sbjct: 207 FAVAIFEEVENLGIPLKVRQVVPIATAAYPTPARRPAYSVLSHQKIVETLGSAPPHWRAS 266
Query: 311 VKLTL 315
++ L
Sbjct: 267 LRAML 271
>gi|261349841|ref|ZP_05975258.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2374]
gi|288860625|gb|EFC92923.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2374]
Length = 280
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 53/316 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G LG L L++ +++ T T L + H+ F
Sbjct: 2 KVLITGSNGMLGHDLTDVLND----KHELILTTSKT----LDITDKEHTVEF-------- 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PD+V+N AA + CE + + A S+N V L+ + L+
Sbjct: 46 -------IKENKPDIVINSAAYTNVDGCEENQELAFSVN--GEGVRNLAIGCREADCPLV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG---- 179
H+STD ++ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG
Sbjct: 97 HISTDYIFNGKNDTPWVEDDEIGPISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGG 156
Query: 180 --PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
P+T+ + K+ +++ +DE P Y D+ + I L +
Sbjct: 157 NFPKTMLELAKT------------HDELTVVYDEVGTPTYTLDLAEAIGKLI------ET 198
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ S + A+ + E+ + PV+AS R P+ ++ + V
Sbjct: 199 DYYGIYHITNSGSCSWCEFAKYIFEVAEVDVK-VTPVTASEFARPAPRPSYSVLNNKRWV 257
Query: 298 QTLNIDPV-TYKDGVK 312
+P+ +YK+ +K
Sbjct: 258 DN-GFEPLRSYKEAIK 272
>gi|88800555|ref|ZP_01116117.1| dTDP-4-dehydrorhamnose reductase [Reinekea blandensis MED297]
gi|88776700|gb|EAR07913.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297]
Length = 295
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 42/225 (18%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ GGTG +G L + L+ D+ A P P+ ++DL S
Sbjct: 3 VLITGGTGQVGFELQRTLAVFG----DIVA-----PTPE-------------ELDLADAS 40
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLL 123
+ L+ P +VVN AA + E +P+ A ++N +P+ L N+ + + L
Sbjct: 41 AVERF-LEQTHPTIVVNAAAYTAVDKAEEEPELAQALNADLPAQLANYCA----RQSAWL 95
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD VY+G +SF E+ + P++VYGK+K+A + I + I R+S +YG +
Sbjct: 96 VHYSTDYVYDGAGESFRTEDHPVNPLSVYGKTKLAGDNAIEASGAQHFIFRTSWVYGARG 155
Query: 183 ISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKI 224
+ ++ ++L GE ++ +D+ P R + ++
Sbjct: 156 HN---------FVKTMLRLGESKSELNVVNDQIGAPTTARLIAQV 191
>gi|251798953|ref|YP_003013684.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2]
gi|247546579|gb|ACT03598.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2]
Length = 283
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 16/218 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V++CAA + E++PD A IN + ++ L +STD V++G
Sbjct: 51 RPDAVIHCAAYTAVDKAESEPDEAFRINAAGTRN--IAVAAREIGAKLCAVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ YKE D P VYG+SK+A E+ + + I+R+S ++G + V L +
Sbjct: 109 GTVPYKEHDRTNPRTVYGQSKLAGEQAVSSLHDRYFIVRTSWVFGAYGNNFVKTMLKLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
S+ E+++ D+ P Y RD+ +L L + + + + G S
Sbjct: 168 -----SQREQLKVVADQWGSPTYTRDLAIFLLELVS------TECYGIYHASGSGVCSWF 216
Query: 255 QMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMD 292
+ A+ + E G ST I P + R P MD
Sbjct: 217 EFAQAIMEESGSSTR-IDPCTTEEYPRPAPRPHYSVMD 253
>gi|312797096|ref|YP_004030018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
gi|303399366|emb|CBK52866.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
gi|312168871|emb|CBW75874.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
Length = 312
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S+ +LV G TG +G L++ + + GK V A +T DL
Sbjct: 10 SEATILVTGVTGQIGSELVRTMQGL-GK---VVAVDRAT------------------FDL 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV ++ +P V+VN AA + +++PD AM +N + V L+
Sbjct: 48 TEPNQMRAV-IRAIKPTVIVNPAAYTAVDAAQSNPDLAMQVNAKAPGV--LAEEARRVGA 104
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH STD V+ G K S Y EEDE P NVYG SK+A E+ I ++ ILR+S +YG
Sbjct: 105 AMIHYSTDYVFNGEKDSPYVEEDEADPKNVYGFSKLAGERAIASAGAHHLILRTSWVYG 163
>gi|300866608|ref|ZP_07111296.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506]
gi|300335380|emb|CBN56456.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506]
Length = 290
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 16/250 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P++VVNCAA + E++P+ A ++N + + L+ E LIH+STD V+ G
Sbjct: 50 KPNLVVNCAAYTAVDKAESEPELANAVNGIAPGI--LAEECEKLGATLIHISTDYVFGGS 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ + Y E D P+ VYGKSK+A E I + I+R++ +YG +
Sbjct: 108 QGYPYCETDTTNPLGVYGKSKLAGELSIIKALDRHIIIRTAWVYGNGGKG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E++ D+ P + D+ I +T+ E N G
Sbjct: 160 VKTMLRLGKDREEIRVVADQIGSPTWTGDLAAAISQITSSIRPEIFGTYHYTNSGVASWY 219
Query: 252 SRVQMAEVVAEIRGYSTSLIK--PVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A+ G+S + + P++ + PA + TK+ L P +++
Sbjct: 220 DFAVAIFEEAKQLGFSLKVKRVIPITTPEYPTPAKRPAYSVLSSTKISAVLGSHPPHWRE 279
Query: 310 GVKLTLAAEA 319
G++ LA EA
Sbjct: 280 GLRQMLAREA 289
>gi|282898470|ref|ZP_06306460.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
gi|281196636|gb|EFA71542.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++PD AMSIN + + L+ + +IH STD V++G
Sbjct: 50 KPDLIVNPAAYTAVDRAESEPDLAMSINGVAPGI--LAEEAKRLGGAIIHYSTDYVFDGN 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
++ YKE D P NVYGK+K+A EK I N I R+S +YG + + + L +Q
Sbjct: 108 QNTPYKENDSTFPQNVYGKTKLAGEKAIQAVGVNHLIFRTSWVYGLRGNNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKI 224
+ + E++ D+ P + R + ++
Sbjct: 164 --RLAKEREEIRVVDDQIGSPTWSRMIAEV 191
>gi|260836799|ref|XP_002613393.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae]
gi|229298778|gb|EEN69402.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae]
Length = 493
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++R L++G +G +G L++ L K T +S P ++ L +
Sbjct: 185 RERYLIIGASGQVGGALMEALLRHRSKEIVAIGTCNSNPREGMIPFCLE----------E 234
Query: 63 SGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+G DA L +P VV CAA + CE +P+ A +N +++VN L+ +
Sbjct: 235 AGRSEDACRDLLTMVRPSVVFICAAFTWTDGCEREPEKAQLVNC-TAVVN-LAQCAKVIN 292
Query: 121 NLLIHLSTDQVYEGVKS------FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
+ ++ STD V+ G Y E P+ YG++K AE+ + ILR+
Sbjct: 293 SKVVFYSTDYVFPGSDGDDTPGGGYSESCPCRPLQTYGETKYRAEQKLLTVHPQALILRT 352
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
S ++GP+ K+ Q + +V S G+ + + +C P Y RD+ + L L S
Sbjct: 353 STVFGPEEQG---KNFVYQLVSNVTS-GKDMALTNVKCT-PTYNRDLAAMTLKLIENGCS 407
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPAD 288
+ +V G + +++++ A VA G TS ++ S + + P D
Sbjct: 408 G------IYHVIGDEAMAKMEFATRVARCLGIDTSKLRVTSDNDGGSRCKRPKD 455
>gi|34499466|ref|NP_903681.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC
12472]
gi|34105318|gb|AAQ61673.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC
12472]
Length = 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 39/239 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-LDALPHSFVFFDV 59
M+ R+L+ G G +G LL+ L+ PL +L+ D + D
Sbjct: 2 MTMPRILITGKNGQVGHELLRALA----------------PLGELIATDRRELDLTWDDA 45
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
++ AL PD++VN AA + E+D +A ++N + V ++ +T
Sbjct: 46 RIEQ-------ALDQHGPDIIVNPAAYTAVDKAESDEATAHAVN--ACAVGVIARWTARH 96
Query: 120 ENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H STD V+ G + ++E+D P +VYG+SK+A E+ I ILR+S ++
Sbjct: 97 GALLVHYSTDYVFSGDGERPWREDDATGPQSVYGRSKLAGEEAIRHAAPRHLILRTSWVF 156
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLS 234
G + ++ ++L G++ ++ +D+ P + + L R+L+
Sbjct: 157 GAHGAN---------FLKTMLKLGQERDSLKVVNDQIGAPASAAMIADVSAELIRRYLA 206
>gi|21227270|ref|NP_633192.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1]
gi|452209765|ref|YP_007489879.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Tuc01]
gi|20905619|gb|AAM30864.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1]
gi|452099667|gb|AGF96607.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Tuc01]
Length = 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L++G +G LG L + P V THH D+D+
Sbjct: 7 KTLIIGSSGMLGSDLCKVF------PDAVKLTHH-------------------DLDITDR 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDVV+N AA + CE++ + A +N S +++ L+
Sbjct: 42 EQVIESILKI-KPDVVINAAAYTNVDGCEDNKELAFQVN--GSGPGYIAEACARAGAKLV 98
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V++G K Y E D P+NVYG SK+ EK I E ++ I+R S ++G +
Sbjct: 99 HFSTDYVFDGSKKEYVESDIPDPINVYGDSKLLGEKKIIENMDDYRIVRISWLFGIHGKN 158
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
V L + + + V+ +D+ P Y D+ +
Sbjct: 159 FVETMLKLS------GEMDTVKVVNDQFGKPTYTMDLAR 191
>gi|383121281|ref|ZP_09941996.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
gi|382984785|gb|EES65624.2| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
Length = 314
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 28/300 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+LV G G LGQ + ++ +H+ ++ + + + + +D+ S
Sbjct: 24 NILVTGANGQLGQAIRAQSHRLQ---------NHNIVFTDVISNDMLETIL---LDITSE 71
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+V K Q +V++NCAA + E D + A IN + V L++ + + LI
Sbjct: 72 DAVRSVC-KSAQINVIINCAAYTDVEKAETDFEMANLINCDA--VRNLATVAKECDITLI 128
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD VY+ K+ Y E DE P+NVY +K A E I+E F + R++ ++
Sbjct: 129 HISTDYVYDSRKAAPYVETDEKHPINVYASTKYAGEVAIHEVGCKFILFRTAWMFSGFGS 188
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK-QMQLL 242
+ + L + ++ E + +D+ P Y ++V II + + EDK M
Sbjct: 189 NFMKTMLRLT------AEKETLNVVYDQVGTPTYAPELVSIIFKV----IDEDKLDMTGE 238
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
N VS A + + G++ + P S+ V P +D +K+ +T I
Sbjct: 239 YNFTNEGSVSWYDFAVAINYLSGHNCK-VNPCSSEEYGSKVIRPNYSVLDKSKVKKTFGI 297
>gi|114563992|ref|YP_751506.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB
400]
gi|114335285|gb|ABI72667.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB
400]
Length = 291
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +G+ L+ L T L L LD ++D+
Sbjct: 2 KILITGKNGQVGRCLVDLLEA-------------QTGLTFLALDRE-------ELDITDS 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D + +F QP++++N AA + E + + A +IN P +L ++ NK N
Sbjct: 42 IQVDKIVTEF-QPNIIINAAAYTAVDKAEQESELAFAINRYGPQNL-----AYAANKINA 95
Query: 123 -LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
++H+STD V++G + Y E D AP YG+SK+A E + + C ILR++ ++G
Sbjct: 96 AILHISTDYVFDGNSAESYTESDVTAPQGEYGRSKLAGEHAVAQACPKHIILRTAWVFGE 155
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + V L + E + D+ P Y D+ K IL ++ + + E K
Sbjct: 156 RGNNFVKTML------RLAKTRESLGVVGDQFGGPTYAGDIAKAILTISKQVVRESKAYG 209
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVD-----RGVQSPADISMDITK 295
+ G P VS A+ + EI ++P+ + + + PA+ ++ K
Sbjct: 210 IYHFSGFP-HVSWYIFAKKIFEIALEQDLHVQPIQVNPITTLDYPTPAKRPANSRLNCDK 268
Query: 296 LVQTLNID 303
+ I+
Sbjct: 269 IHNAFGIE 276
>gi|406944767|gb|EKD76454.1| hypothetical protein ACD_43C00107G0008 [uncultured bacterium]
Length = 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 54/306 (17%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S + +V+ G G LGQ L L E KP + TH D+D+
Sbjct: 10 SNQNKIVIIGRGLLGQALATALQEF--KP--IILTHR-------------------DLDI 46
Query: 62 KSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D V GQ PDV++N AA + CE + AM +N S +L+ + +
Sbjct: 47 TKQAQVDEV---LGQLAPDVIINAAAYAKVDQCETERALAMQVN--SVAPRYLAMAAKRQ 101
Query: 120 ENLLIHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKFIYE----KCSNFAILR 173
+ IH STD V+ G ++ + + ++ AP+N YG+SK+ E+ I + F I+R
Sbjct: 102 DAYFIHYSTDYVFSGKQAAGYPETANDFAPINTYGESKLGGEQAIQQVADSTWQKFYIIR 161
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTN 230
++ +YG + ++D++++ G++ ++ +D+ P + +D LA
Sbjct: 162 TAWLYGGGGTN---------FVDTMIALGKQRSELKVVNDQHGSPTFTQD-----LAEQT 207
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADIS 290
R L E + + + + + A+ + + + T + P +++ R Q PA
Sbjct: 208 RQLIEQRLAGGIYHCTNSGHCTWFEFAQAIFALN-HQTVQVLPCTSAEFPRPAQRPAYSI 266
Query: 291 MDITKL 296
+ TKL
Sbjct: 267 LLNTKL 272
>gi|398812658|ref|ZP_10571375.1| dTDP-4-dehydrorhamnose reductase [Variovorax sp. CF313]
gi|398076827|gb|EJL67875.1| dTDP-4-dehydrorhamnose reductase [Variovorax sp. CF313]
Length = 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++PD A +N S V ++ L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPDFARKLNATSPGV--VAEAARQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V++G + +KE D P++VYG++K+ E+ + + C N I R+S +Y
Sbjct: 101 HYSTDYVFDGSGTRPWKEGDATGPLSVYGQTKLEGEQLVAQNCPNHLIFRTSWVY 155
>gi|160425319|gb|ABX39511.1| RmlD [Aeromonas hydrophila]
Length = 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PDV++NCAA + E +P+ A +N + L + E+ LL+H STD V++G
Sbjct: 53 HPDVIINCAAYTAVDAAETEPELADEVNHKALLS--MDRGAEDLGALLVHFSTDYVFDGT 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ-------TISPVP 187
S + E D+ +P+NVYG SK A E I C + I+R+ +YG + ++
Sbjct: 111 GSQPWLETDQPSPLNVYGASKYAGELAIQRLCPDHLIIRTGWLYGGEGKHFARTILARAS 170
Query: 188 KSLPI-----QW----------------IDSVLSKGEKVEFFHDECR 213
+ LP+ QW + V+ KV +H CR
Sbjct: 171 QGLPLGVVADQWGAPTQVDWLARASVLALSQVVRSPSKVGLYHLTCR 217
>gi|381200751|ref|ZP_09907885.1| dTDP-4-dehydrorhamnose reductase [Sphingobium yanoikuyae XLDN2-5]
Length = 298
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLST 128
AL +PD++V+ A + E+D AM+IN PS + + + + LIH+ST
Sbjct: 47 ALVNAKPDIIVSAGAYTAVDKAESDDQLAMTINGRAPSMIADTAARL----DVPLIHIST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G + Y+E+D + PV+VYG++K A E+ + + AI+R+S +Y P + V
Sbjct: 103 DYVFDGYGATAYREDDPVNPVSVYGRTKRAGEEAVMAAGRDHAIVRTSWVYSPFGNNFVK 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE--DKQMQLLLNV 245
L + ++ + V D+ P D+ + + + ++ L D + + ++
Sbjct: 163 TML------RLAAERDLVAVVADQKGAPTSAFDIAQGLFTMADQMLVHRGDPGRRGIFHL 216
Query: 246 GGPDRVSRVQMAE---VVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
G AE + G ++ ++ ++ + + P++ +D KL+ I
Sbjct: 217 TGATSTDWATFAEGIFAASAACGGPSAAVRRITTADYPTAARRPSNARLDNGKLLTHFGI 276
Query: 303 DPVTYKDGV 311
P ++ +
Sbjct: 277 SPPSWTQSI 285
>gi|447919447|ref|YP_007400015.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas poae RE*1-1-14]
gi|445203310|gb|AGE28519.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas poae RE*1-1-14]
Length = 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P++++N AA + E++PD+A +IN + V E + L LIH STD V+
Sbjct: 54 RPNLIINAAAHTAVDQAESEPDAAFAINAIAPGV-----LAEEAKALGIPLIHYSTDYVF 108
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E D P+ VYG+SK+A E+ I + +LR+S +Y S K+
Sbjct: 109 DGSKPAPYTEADATNPLGVYGQSKLAGEQAIAAVGGEYLVLRTSWVY-----SNTGKNFL 163
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + + D+ P + + L RW + + ++
Sbjct: 164 LT-MQRLLQEKPHMRIVADQIGAPTWAGTIANSTRGLIERWQAGQVGDWGVYHLTAGGET 222
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ +AE G + + ++ + +S+ + P + +D ++L Q + ++
Sbjct: 223 SWFGFAQAIAEHLQTAGKTCAELEAIPSSAYPTPARRPLNSRLDCSRLQQQWQVSQPQWQ 282
Query: 309 DGVKLTLAAE 318
D ++ LA +
Sbjct: 283 DALRECLAGQ 292
>gi|390955629|ref|YP_006419387.1| dTDP-4-dehydrorhamnose reductase [Aequorivita sublithincola DSM
14238]
gi|390421615|gb|AFL82372.1| dTDP-4-dehydrorhamnose reductase [Aequorivita sublithincola DSM
14238]
Length = 291
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 123/314 (39%), Gaps = 36/314 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGK-PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K VL+ GG G LG L + + E Y + L LD L +
Sbjct: 2 KNVLIFGGDGQLGWSLKKVVGNTESLFQYHFLGSKEGDVLDVASLDLLFQKY-------- 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+P +VNCAA + E D D+A IN + L ++ +
Sbjct: 54 -------------KPAYIVNCAAYTAVDKAEEDIDAAFDINAQGA--ENLGILCKDNNSC 98
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G+K S KEED P+ VYG SK+ E+ I + ILR+S +Y
Sbjct: 99 LIHISTDFVFDGIKTSPLKEEDNTNPIGVYGLSKLKGEEAIRRSDCEYFILRTSWLYSEF 158
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L + LS D+ P Y D+ + I+ L +S +K +
Sbjct: 159 GNNFLKTMLRLAETKKSLS------VVADQVGTPTYAGDLAQFIVYL----ISNNKSGRD 208
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ S A + + L +P+ + + PA + KL N
Sbjct: 209 TYHYSNEGVASWYDFAREIFAVAKLDVKL-EPIPTENFPTLAKRPAYSVLSKEKLRTDFN 267
Query: 302 IDPVTYKDGVKLTL 315
+ +KD +K L
Sbjct: 268 YNIPNWKDSLKECL 281
>gi|424841232|ref|ZP_18265857.1| dTDP-4-dehydrorhamnose reductase [Saprospira grandis DSM 2844]
gi|395319430|gb|EJF52351.1| dTDP-4-dehydrorhamnose reductase [Saprospira grandis DSM 2844]
Length = 295
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD +++ AA++ CE P + +NV +SL L+ + + + + +S+D V+ G
Sbjct: 58 PDAIIHAAAIANSSFCEEHPALSYHVNVYASLT--LADYAKARGIPFLFVSSDMVFNGHS 115
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV-PKSLPIQWI 195
+ Y E+ P+ YG K+A E+ + N I R ++ G I P K +W+
Sbjct: 116 APYDEDSFAYPLLQYGSQKLAVEEALLADYPNAYICRLPLLLG---IGPAYSKHFFGRWL 172
Query: 196 DSVL-SKGEKVEFFHDECRCPVYVRDVVKI---ILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ +GE++ F DE R P+ + + +LAL + + ++++ + + GP+R+
Sbjct: 173 AQLADEEGEQLAAFSDEYRTPLSAYEAARYLQQLLALI--YYNTEEKLPRIWHFPGPERL 230
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
SR+ +A+ +A G I ++AS D P D+SM + LN P++
Sbjct: 231 SRLALAQKMAHCFGLDAHKI--LAASLADIQPARPEDLSMQSLYAAKYLNYSPLS 283
>gi|222528113|ref|YP_002571995.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM
6725]
gi|222454960|gb|ACM59222.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM
6725]
Length = 281
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+++++CAA + CE+D D+A +N + +++ E L+++STD V++G
Sbjct: 49 KPNIIIHCAAYTNVDGCESDKDTAFKVNAIGTRNVAMAA--EKVGAKLVYISTDYVFDGE 106
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D P+++YG SK+A E+F+ CS + I+R + +YG + V + +
Sbjct: 107 KEKPYNEFDRPNPISIYGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKL-- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
KGE ++ +D+ P + +DVV+ + + N
Sbjct: 165 ---AKEKGE-IDVVNDQRGNPTFTKDVVQAVEVIMN 196
>gi|227827280|ref|YP_002829059.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25]
gi|227459075|gb|ACP37761.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25]
Length = 275
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R+L+ G +G LG L L E E K +++ L L+ P + D +K
Sbjct: 2 RILITGASGQLGLELSSVLKEEELIKTFNIKEEQGGYKLD---LEDFP---LLEDFIIKK 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+PDV++N A+L+ CE + A +N + V + + E L
Sbjct: 56 ------------RPDVIINTASLTDVDKCEVEKAEAFKVNAEA--VKHIVRASRVIEAYL 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD V++G + Y E D P+N YG SK+ E + + I+R+S ++
Sbjct: 102 IHLSTDYVFDGERGLYNEGDLPNPINYYGLSKLLGETYALSYDDSL-IVRTSGVFR---- 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
K P+ ++ L +G++V F P+ R + + I L + +L
Sbjct: 157 ---HKGFPV-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELIQY------RKTGIL 205
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRG--VQSPADISMDITKLVQTLN 301
NV G +R+SRV +A + + S S IK V +G + P D S+DI+K + L+
Sbjct: 206 NVAG-ERISRVDLAMKIKDKFNLSGS-IKEVDYV---KGWIAKRPFDSSLDISKAKKILS 260
Query: 302 ID 303
+D
Sbjct: 261 VD 262
>gi|11500015|ref|NP_071262.1| dTDP-4-dehydrorhamnose reductas [Archaeoglobus fulgidus DSM 4304]
Length = 285
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 35/313 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G G LG L+ L E + + L H DVD+
Sbjct: 2 KVAVIGAKGQLGTDLVDVLKE------------------EFTVYPLTHE----DVDVAVS 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ L+ PDV++N AA EN + A ++N +L ++ + + + I
Sbjct: 40 ESLEV--LRDIHPDVIINTAAYVRVDDAENHAEKAFAVNAIGALN--VARISSEIDAVNI 95
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y E D+ P+NVYG SK A E ++R + +YG
Sbjct: 96 YISTDYVFDGEKGEPYVETDKPNPINVYGASKYAGEILTKNYSEKHYVIRVASLYGKAGA 155
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + + W+ + KG+++ D+ P Y +DV + L D + ++
Sbjct: 156 SGKGGNF-VNWVVDMARKGQELRIVADQFMSPTYTKDVALAVREFLK--LRPDYGIYHMV 212
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
N G S + + + EI + I+P+ +S ++R + PA ++ KL + + I
Sbjct: 213 NDG---YCSWFEFTKAIFEILDWDVE-IQPIKSSELNRLARRPAFSALQNYKL-ERIGIK 267
Query: 304 PVTYKDGVKLTLA 316
+++ ++ LA
Sbjct: 268 MRHWREALRDYLA 280
>gi|333902238|ref|YP_004476111.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fulva 12-X]
gi|333117503|gb|AEF24017.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fulva 12-X]
Length = 289
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ QP +++N AA + E++P++A +IN + V L+ + LIH STD
Sbjct: 45 AVRRLQPQLIINAAAHTAVDAAESEPEAAFAINATAPGV--LAEEAAALDVPLIHYSTDY 102
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K S Y E D P+ VYG+SK+A E+ + ILR+S +Y ++
Sbjct: 103 VFDGSKASAYDESDAPNPLGVYGRSKLAGEQAVAAVGGKHLILRTSWVY---SLHGRNFL 159
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPD 249
L +Q +L + E++ D+ P + + + L RW S + +
Sbjct: 160 LTMQ---RLLQEREQLSVVADQIGAPTWAGSIAAATVQLIERWQSAQTATWGVYHFTARG 216
Query: 250 RVSRVQMAEVVA---EIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
+ AE +A + +G + + + ++ + + P + +D ++L + +
Sbjct: 217 ETAWFGFAEAIAAQLQAQGKTVAQLTSIATTQYPTPARRPLNSRLDCSRLERDWGVRLPD 276
Query: 307 YKDGV 311
+ DG+
Sbjct: 277 WHDGL 281
>gi|77862409|gb|ABB04477.1| UDP-2-acetamido-2,6-dideoxy-L-lyxo-4-hexulose reductase [Yersinia
kristensenii]
Length = 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 133/308 (43%), Gaps = 33/308 (10%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
+++G TG LG L L+E K +V T ST ++ + L + + +VD
Sbjct: 1 MILGATGMLGYSLFANLNEY--KQLNVIGTARSTAGKEIYFNKLQENLLL-NVDATDIDS 57
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
D A+K +PDVV+NC L A+ IN S L + L++ + E IH
Sbjct: 58 IDN-AIKLAKPDVVINCIGLIKQHEIAKQYVPAIKIN--SLLPHQLAALCDKYEARYIHF 114
Query: 127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV 186
STD V++G Y E D ++YGKSK E LR+SII G + S V
Sbjct: 115 STDCVFDGKTGLYNELDLPNSTDIYGKSKYLGE----VNYGRHLTLRTSII-GHELSSAV 169
Query: 187 PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL-LNV 245
ID L + +V F + + K+ L + L ++ L L+V
Sbjct: 170 ------SLIDWFLKQQNEVNGFSKAIFSGLPTSYIAKL---LAEKILVDNSLTGLYHLSV 220
Query: 246 GGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPV 305
D + + + +V+EI G+S +++ Q D S+D KL +N +P
Sbjct: 221 ---DPIDKFSLISLVSEIYGHSV---------KINKSEQLVIDRSLDSKKLRDAINFNPP 268
Query: 306 TYKDGVKL 313
+++ ++
Sbjct: 269 KWRELIEF 276
>gi|378948246|ref|YP_005205734.1| protein RfbD [Pseudomonas fluorescens F113]
gi|359758260|gb|AEV60339.1| RfbD [Pseudomonas fluorescens F113]
Length = 290
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +++N AA + E++P+ A +IN + + L+ LIH STD +++G+
Sbjct: 50 RPGLIINAAAHTAVDQAESEPEQAFAINATAPGI--LAQAAVALGVPLIHYSTDYIFDGL 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E+D P++VYG+SK+A E I + ILR+S +Y S ++ +
Sbjct: 108 KPVPYTEDDTPNPLSVYGRSKLAGENAIRQAGVQHLILRTSWVY-----STAGRNFLLT- 161
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ +L + ++ ++ P + + L RW + ++ S
Sbjct: 162 MQRLLQEKPQLRVVANQIGAPTWAGTIADSTAQLIERWQAGHPGAWGTYHLTAQGETSWF 221
Query: 255 QMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E R + ++P+ +S+ P + +D T+L + + ++ +
Sbjct: 222 GFAQAIGENLLERHKPCAQLEPIESSAYPTPAPRPLNSRLDCTRLFKEWGVSQPDWRSAL 281
Query: 312 KLTLAAEA 319
+ LA +A
Sbjct: 282 QQCLAGQA 289
>gi|295695519|ref|YP_003588757.1| dTDP-4-dehydrorhamnose reductase [Kyrpidia tusciae DSM 2912]
gi|295411121|gb|ADG05613.1| dTDP-4-dehydrorhamnose reductase [Kyrpidia tusciae DSM 2912]
Length = 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+VV++ AA + E DPD A +N + +++ E ++++STD V++G
Sbjct: 50 RPEVVIHAAAYTRVDEAERDPDEAFRVNAIGARN--VAAAAEAVGAKVVYVSTDYVFDGK 107
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
K Y E D +P+NVYG+SK+A E+ I+R+S +YG + V L +
Sbjct: 108 KPSYSEFDTPSPINVYGRSKLAGEQMTALFNRRHFIVRTSWLYGRNGKNFVKTMLELA-- 165
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
+G+ V +D+ P Y D+ + I L + + + S +
Sbjct: 166 ----RQGKPVRVVNDQIGSPTYTMDLARFIGRLIS------TNLFGTYHASNSGSCSWYE 215
Query: 256 MAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
A+ + E G+S ++P+S+ + R PA
Sbjct: 216 FAKAIFEEAGFSDVQVEPISSRELARAAARPA 247
>gi|238023766|ref|YP_002907998.1| dTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1]
gi|237878431|gb|ACR30763.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1]
Length = 314
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V+ CAA P VCE++P +A +INV + + L +STD V++G
Sbjct: 73 RPDAVIVCAAERRPDVCEHEPAAARAINVEALAALAARADALGAWTLA--MSTDYVFDGR 130
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ Y+E D AP+N YG+SK E + + + +LR ++YGP
Sbjct: 131 AAPYRETDPPAPLNAYGRSKADGEAALLDASARACVLRLPLLYGP 175
>gi|422345042|ref|ZP_16425956.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens
WAL-14572]
gi|373228588|gb|EHP50896.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens
WAL-14572]
Length = 294
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 137/310 (44%), Gaps = 28/310 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L + + + V+ ++ + L +D L D+ S
Sbjct: 2 KILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKL---------DITSL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PDVV+NCAA + CE++ D A +N S L+ E L+
Sbjct: 53 ENVKNV-LNEEKPDVVINCAAATNVDGCESNEDFAFKVN--SLGARNLAMVCEEIGAKLV 109
Query: 125 HLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+STD V+ GV KS E D AP +VYGK+K+ E ++ E CS + I+R++ +YG
Sbjct: 110 QVSTDYVFSGVGEKSL-TEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVG 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V + + + E + +D+ P + D+ IL L + + +
Sbjct: 169 HNFVYTMMRLG------KEKESLNVVNDQKGNPTHANDLAYHILKLI------ETEEYGI 216
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+ G + A+ + E+ G + ++ P ++ + P S+D L T+
Sbjct: 217 YHCTGKGECTWYDFAKEIMELAG-NKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGD 275
Query: 303 DPVTYKDGVK 312
+ +K+ +K
Sbjct: 276 EMRDWKEALK 285
>gi|53804350|ref|YP_113747.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str.
Bath]
gi|53758111|gb|AAU92402.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str.
Bath]
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E +PD A +N + V L++ LIH STD V+ G
Sbjct: 53 RPDLIVNAAAYTAVDRAEQEPDLAWKVNAEAPAV--LAAEATRLGIGLIHYSTDYVFPGD 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+E+D + P NVYG+SK+A E+ I + ILR++ +YG + + + L
Sbjct: 111 GAVPYREDDPVGPRNVYGRSKLAGEQAIAASGAAHLILRTAWVYGVRGQNFLRTML---- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
++++ E V D+ P +VR + +
Sbjct: 167 --RLMAEREVVRVIDDQFGAPTWVRMIAE 193
>gi|397686863|ref|YP_006524182.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
gi|395808419|gb|AFN77824.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
Length = 669
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G +G LL + L+A+ S D+ ++
Sbjct: 357 RILVCGAGGQVGHCLLNQAASFG-------------------LEAIGLSHGELDITCRTQ 397
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW--LSSFTENKENL 122
G AL+ +P +++N AA + + D A + + VN +++ E
Sbjct: 398 IG---QALERYRPALIINAAAYT-------NLDHAEAEIAQAEAVNCHGVANLAEAASEF 447
Query: 123 ---LIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L HLS++ V+ G Y+E D +P NVYG +++A E I + + ILR+S IY
Sbjct: 448 GIPLFHLSSEYVFSGDGDQPYRETDPTSPANVYGATRLAGEDAIRSRLDRYLILRTSWIY 507
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + V L + K +++ D+ CP R + ++++ L R+ E
Sbjct: 508 GEHGNNFVKTMLKLG------GKSDEISVVSDQIGCPTRSRSIARVLIELAARYCRESTL 561
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIK------PVSASSVDRGVQSPADISMD 292
L + S + AE + LI P+++ S+ R PA +D
Sbjct: 562 QWGLYHYSSSSPCSWAEFAEEIFR-EAARVGLIDKAPRVLPIASESLPRAAARPAWSVLD 620
Query: 293 ITKLVQTLNIDPVTYKDGVK 312
++ + I P ++D ++
Sbjct: 621 CRRIEEVFGIRPKPWRDELR 640
>gi|54026611|ref|YP_120853.1| dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152]
gi|54018119|dbj|BAD59489.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM
10152]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S R++V G G +G+HL++ G YD A D+
Sbjct: 9 SPARLVVTGAAGQVGRHLMRLAPHARG--YDRA---------------------HLDI-- 43
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ DAV DVV+NCAA + E +PD+A ++N V L+S
Sbjct: 44 ---TDADAVRAVVHPGDVVINCAAYTAVDKAETEPDAAFAVNGTGPAV--LASACARAGA 98
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIHLSTD V+ G + Y+ D AP + YG+SK+A E+ + + ++R++ +Y
Sbjct: 99 RLIHLSTDYVFGGTHTDPYEPTDPTAPASAYGRSKLAGERAVLDLAPAAHVVRTAWVY 156
>gi|292492258|ref|YP_003527697.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4]
gi|291580853|gb|ADE15310.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 30/181 (16%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++KR+L++G +G +G L + L+ PL +++ AL +
Sbjct: 4 TRKRILLLGASGQVGWELQRTLA----------------PLGEVI--ALRRDRLDLAQVE 45
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENK 119
GS + QP ++VN AA + E +P+ AM+IN VP L + +
Sbjct: 46 NIGSCLADI-----QPILIVNAAAYTAVDQAEEEPERAMAINGDVPGIL----AEAARQQ 96
Query: 120 ENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIH STD V++G S Y+E D P+NVYG++K+A EK I + ILR+S +Y
Sbjct: 97 GAALIHYSTDYVFDGENTSPYRETDTPRPLNVYGQTKLAGEKAIAAVGGAYLILRTSWVY 156
Query: 179 G 179
G
Sbjct: 157 G 157
>gi|160945148|ref|ZP_02092374.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii
M21/2]
gi|158442879|gb|EDP19884.1| spore coat polysaccharide biosynthesis protein SpsK
[Faecalibacterium prausnitzii M21/2]
Length = 278
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQ---GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++LV G G++G ++Q G E+ P AT + Q +L
Sbjct: 2 KKILVTGAGGFVGSRVVQQWSGRYELCTFPKGFLATAREDAVRQAVLQQ----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+PD +++ AA+S C + P+ A NV L WL+
Sbjct: 51 ---------------RPDGILHTAAISDTGYCADHPEQAYRANV--ELPVWLARAAAEIG 93
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+ S+DQVY GV+ E + P NVYG+ K+ E+ + C +LR++ +Y
Sbjct: 94 AKLVAFSSDQVYAGVEQSGPLPETIPLKPANVYGQDKLEMEQRVQALCPGAVLLRATWMY 153
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
P P+ +LP+ + + +GE V F + R YVR V ++ A
Sbjct: 154 DLPGYRLPIRGNLPLNLLRAA-QRGESVRFSVRDFRGITYVRQAVALLEA 202
>gi|15004825|ref|NP_149285.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC
824]
gi|337735152|ref|YP_004634600.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum DSM
1731]
gi|384456662|ref|YP_005672999.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum EA
2018]
gi|14994437|gb|AAK76867.1|AE001438_120 dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC
824]
gi|325511269|gb|ADZ22904.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum EA
2018]
gi|336293730|gb|AEI34863.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum DSM
1731]
Length = 239
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 20/243 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVVVN AA + CE + A +N + L+ E L+H+S+D V+ G
Sbjct: 10 RPDVVVNAAAYTNVDACETNEKKAFEVNAFGA--KNLAIAAEEIGAKLVHISSDYVFSGE 67
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ +K+ED+ +P +VYGKSK + F+ E S + I+R + +YG + + V
Sbjct: 68 GNTPFKDEDKASPQSVYGKSKKMGDDFVKEFSSKYFIVRPAWVYGYKGKNFVYT------ 121
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
I + + E V +D+ P V D+V IL L + DK + N G S
Sbjct: 122 IMELAKEKEVVTVVNDQRGNPTNVEDIVYHILKL----IVTDKYG--VYNCSGHGECSWY 175
Query: 255 QMAEVVAEIRGYST--SLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 312
A EI S S+IKP S++ R + P+ S++ L + D +KD +K
Sbjct: 176 DFA---CEIIKLSNIPSVIKPCSSNEYKRQAKRPSYSSLENKNLSLAVGDDMRYWKDALK 232
Query: 313 LTL 315
+ +
Sbjct: 233 VFI 235
>gi|323525478|ref|YP_004227631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001]
gi|323382480|gb|ADX54571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ G+P + V T S P P ++ +D++
Sbjct: 3 KVAVMGASGLLGRAIVD---ELAGQPDWQVVGTAFSRPTPNTVV-----------LDVRE 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + PD +V AA P VCE P+ A ++NV + ++ L
Sbjct: 49 ARAIEQF-IDREAPDALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLS 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
I STD V++G + Y+ + E AP+N YG+SK+ E+ + +LR ++YGP
Sbjct: 108 I--STDYVFDGTRPPYRPDSEPAPLNAYGRSKLEGERALAAATDFGCVLRLPLLYGP 162
>gi|148643364|ref|YP_001273877.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii
ATCC 35061]
gi|148552381|gb|ABQ87509.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii
ATCC 35061]
Length = 280
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 137/316 (43%), Gaps = 53/316 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G LG L L++ +++ T T L + H+ F
Sbjct: 2 KVLITGSNGMLGHDLTDVLND----KHELILTTSKT----LDITDKEHTVEF-------- 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PD+V+N AA + CE + A S+N V L+ + L+
Sbjct: 46 -------IKENKPDIVINSAAYTNVDGCEENQKLAFSVN--GEGVRNLAIGCREADCPLV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG---- 179
H+STD V+ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG
Sbjct: 97 HISTDYVFNGKNDTPWVEDDEIGPISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGG 156
Query: 180 --PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
P+T+ + K+ +++ +DE P Y D+ + I L +
Sbjct: 157 NFPKTMLELAKT------------HDELTVVYDEVGTPTYTLDLAEAIGKLI------ET 198
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLV 297
+ ++ S + A+ + E+ + PV+AS R P+ ++ + V
Sbjct: 199 DYYGIYHITNSGSCSWCEFAKYIFEVAEVDVK-VTPVTASEFARPAPRPSYSVLNNKRWV 257
Query: 298 QTLNIDPV-TYKDGVK 312
+P+ +YK+ +K
Sbjct: 258 DN-GFEPLRSYKEAIK 272
>gi|345868197|ref|ZP_08820191.1| dTDP-4-dehydrorhamnose reductase [Bizionia argentinensis JUB59]
gi|344047411|gb|EGV43041.1| dTDP-4-dehydrorhamnose reductase [Bizionia argentinensis JUB59]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 43/316 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV GG G L ++ L ++ K + + + DL+S
Sbjct: 3 KILVTGGNGQLAS-CIKDLEKLYNKLKFIYTDYQELDI----------------TDLESV 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F K D +NCAA + E++ A +N + L+ ++ L+
Sbjct: 46 DTF----FKNNSFDYCINCAAYTAVDKAESEIKIAFDVNEIGA--KNLAIVCKDFHATLM 99
Query: 125 HLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G KS FYKEED + P++VYG+SK+ E I + SN I R+S +Y
Sbjct: 100 HVSTDFVFDGRKSSFYKEEDFVNPISVYGQSKLKGELQISKSLSNHFIFRTSWLYSEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ + + + + +++ D+ P Y +D+ ++IL L + +++ Q L
Sbjct: 160 NFMKTMMRLS------KEKDELSVVVDQIGTPTYAKDLAQLILQLIS---TKNTQYGLYH 210
Query: 244 ----NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQT 299
V ++ E+ AEI+ + P+ + + PA +D +K+ +T
Sbjct: 211 YSNEGVASWYDFAKAIFEEIDAEIK------LSPIKTTEYPTPAKRPAFSVLDKSKIKRT 264
Query: 300 LNIDPVTYKDGVKLTL 315
++ ++D ++ L
Sbjct: 265 FQLEIPHWRDSLRKAL 280
>gi|171057311|ref|YP_001789660.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6]
gi|170774756|gb|ACB32895.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6]
Length = 296
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 32/317 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G LG L + L+ PL +L+ AL F DL
Sbjct: 2 KILLLGKNGQLGWELQRALA----------------PLGELI--ALDRHATDFAADLAQP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A ++ QP V+VN AA + E++P+ A ++N S V L+ L+
Sbjct: 44 DSL-AATVRALQPQVIVNAAAYTAVDKAESEPELARTVNATSPGV--LAQAAAEAGAWLL 100
Query: 125 HLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G + + ED AP+NVYG++K+ E I ILR+S +Y +
Sbjct: 101 HYSTDYVFDGSGTAARSEDAATAPLNVYGQTKLEGEAAIRASGCRHLILRTSWVYAARGG 160
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ L + + E++ D+ P + + + + L + +
Sbjct: 161 NFAKTMLRLA------GERERLTVIDDQIGAPTGADLLADLSAHMLRQALQQPECAGTYH 214
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQT 299
V G + V+ R + L I V +S+ Q P + + +L Q
Sbjct: 215 AVAGGETSWHAYARHVIEWARAHGHELKATDIAAVPSSAFATAAQRPLNSRLSTARLQQV 274
Query: 300 LNIDPVTYKDGVKLTLA 316
+ ++ GV LA
Sbjct: 275 FGLHLPHWQTGVDRMLA 291
>gi|120402727|ref|YP_952556.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1]
gi|119955545|gb|ABM12550.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1]
Length = 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
DVVVNCAA + E +PD A ++N + ++ LIHLSTD V+ G +
Sbjct: 53 DVVVNCAAFTKVDAAEAEPDRAHAVNAVGA--GNVAQACARAGASLIHLSTDYVFSGSRR 110
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY--GPQTISPVPKSLPIQW 194
Y+ +DE P++VYG++K+A E+ + + ++R++ IY G T
Sbjct: 111 RPYEIDDETGPLSVYGRTKLAGEQAVLAALPDAYVVRTAWIYEGGAGT--------DFAA 162
Query: 195 IDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
+ ++G+ VE D+ P YV D+ + +L + + + +L+ VSR
Sbjct: 163 VMRRAAQGDGTVEVVADQIGSPTYVGDLCRALLQIADGGVRGP-----VLHAANLGAVSR 217
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
A+ V G S ++PV + R PA
Sbjct: 218 FDQAQAVFAELGADPSRVRPVGSDRHPRPAPRPA 251
>gi|219852976|ref|YP_002467408.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c]
gi|219547235|gb|ACL17685.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c]
Length = 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 35/224 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ GGTG LG+ +LQ P VA H V +
Sbjct: 23 RTLIFGGTGRLGR-VLQCT-----YPSSVAVGH--------------------TVPITDK 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +P +V+N AA + CE D A+ +N ++++ + L+
Sbjct: 57 EAVRALVERV-RPTLVLNAAAWTDVDGCEIDQTRALLVNGEGP--GYIATACKEVGATLV 113
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V+ G + Y E+D ++P+NVYG++K E+ + C ++ I+R+S ++GP +
Sbjct: 114 HFSTDYVFSGDRMVYYEDDPVSPINVYGRAKALGEERVMAGCHDYRIIRTSRLFGPYGEN 173
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
V +L +Q + + V +DE P Y+ D+ ++ A+
Sbjct: 174 FV--TLMLQ----RSADKKTVTVINDEVSSPTYIPDLASMVPAV 211
>gi|409122713|ref|ZP_11222108.1| dTDP-4-dehydrorhamnose reductase [Gillisia sp. CBA3202]
Length = 283
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G +G LG+ LQ L+E + + L +D+ ++D+ S
Sbjct: 2 KTVLVTGASGQLGK-CLQKLAE------------NQHEIDWLFMDSS-------EIDITS 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + Q D +NCAA + E++ + A SIN + V L+ + +L
Sbjct: 42 SCDLE-MCFSSKQIDYCINCAAYTNVEKAESEKEKAFSINAEA--VKNLAEICRKHKTVL 98
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V++G S Y EED+ P+NVYG SK+ E+ I I R+S +Y
Sbjct: 99 IHISTDYVFDGTSNSPYIEEDDTNPINVYGASKLMGEQHIQTTIGYHFIFRTSWLY 154
>gi|358065440|ref|ZP_09151982.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi WAL-18680]
gi|356696332|gb|EHI57949.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi WAL-18680]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++NCA ++ CE + A +N + LS + ++ LSTD V++G
Sbjct: 55 RPHYIINCAGMTDVAACEEQVELAYRVNALGA--RNLSVAARKIKARMVQLSTDDVFDGS 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
Y E D P VYGKSK+A E F+ E C+ I+RSS I+G + +Q
Sbjct: 113 SKVPYTEFDTPNPQTVYGKSKLAGENFVREFCNRHIIVRSSWIFG-------DGNSYMQK 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
I S+ +G+++ D+ P ++ ++ L ++D L +V G SR
Sbjct: 166 ILSMAKEGKEISAARDQMASPTGAMELAGKVIELMEH--ADDG----LYHVTGQGCCSRY 219
Query: 255 QMAEVVAEIRGYSTSLIKPVSA 276
+ A+ V + GY ++PV A
Sbjct: 220 EFAKEVIRLSGYDAE-VRPVDA 240
>gi|440740011|ref|ZP_20919510.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
BRIP34879]
gi|440378337|gb|ELQ14960.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
BRIP34879]
Length = 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 115/250 (46%), Gaps = 18/250 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P++++N AA + E++PD+A +IN + V E + L LIH STD V+
Sbjct: 54 RPNLIINAAAHTAVDQAESEPDAAFAINAIAPGV-----LAEEAKALVIPLIHYSTDYVF 108
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E D P+ VYG+SK+A E+ I + +LR+S +Y S K+
Sbjct: 109 DGSKPAPYTEADATNPLGVYGQSKLAGEQAIAAVGGEYLVLRTSWVY-----SNTGKNFL 163
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ + +L + + D+ P + + L RW + + ++
Sbjct: 164 LT-MQRLLQEKPHMRIVADQIGAPTWAGTIANSTRGLIERWQAGQVGDWGVYHLTAGGET 222
Query: 252 SRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYK 308
S A+ +AE G + + ++ + +S+ + P + +D ++L Q + ++
Sbjct: 223 SWFGFAQAIAEHLQTAGKTCAELEAIPSSAYPTPARRPLNSRLDCSRLQQQWQVSQPQWQ 282
Query: 309 DGVKLTLAAE 318
D ++ LA +
Sbjct: 283 DALRECLAGQ 292
>gi|197334022|ref|YP_002154930.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11]
gi|197315512|gb|ACH64959.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11]
Length = 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 30/257 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G +G L + L++ E ST + L D L D+ +
Sbjct: 2 RVLITGCYGQVGHCLTEQLADEE-----------STIVLSLDRDQL---------DITNQ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + F QP +++N AA + E + D + IN ++L+ + + ++
Sbjct: 42 DAVNTIVDDF-QPTIIINAAAHTAVDKAEEEVDLSYVINRDGP--SYLAQAAQRVDAAML 98
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG K Y+E D P VYG+SK+A E + C ILR++ ++G
Sbjct: 99 HISTDYVFEGNKVGEYQETDTTNPQGVYGESKLAGEIAVANACDKHIILRTAWVFGENGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + + LS D+ P Y D+ ++ + R D+ +
Sbjct: 159 NFVKTMLRLAATRNALS------IVGDQFGGPTYAGDIAHALIQIAKRITKGDEVEYGVY 212
Query: 244 NVGGPDRVSRVQMAEVV 260
+ G VS + AE +
Sbjct: 213 HYSGLPHVSWFEFAEAI 229
>gi|398952092|ref|ZP_10674554.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM33]
gi|398155589|gb|EJM44028.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM33]
Length = 289
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAIAPGI--LAEEALALDIPLIHYSTDYVFDGL 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D P+ VYGKSK+A E+ I + ILR+S +Y + + L +Q
Sbjct: 108 KAGPYNEDDTPNPLGVYGKSKLAGEQAIKDVQGKHLILRTSWVYSNHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + ++ D+ P + + LAL W + + ++ S
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTLANSTLALIEHWQAREVANWGTYHLTAQGETSWF 221
Query: 255 QMAEVVAEI---RGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A+ + E +G + + P+ +S P + +D ++L + + ++ +
Sbjct: 222 GFAQAIGEALRQQGKPCAALLPIPSSDYPTPAARPLNSRLDCSRLQRDWGVSQPDWQMAL 281
Query: 312 KLTLAAE 318
+ L +
Sbjct: 282 RECLTEQ 288
>gi|393760545|ref|ZP_10349354.1| dTDP-4-dehydrorhamnose reductase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161280|gb|EJC61345.1| dTDP-4-dehydrorhamnose reductase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG G LGQ L Q ATH L L +L H ++D+
Sbjct: 3 RILISGGHGQLGQALTQ------------QATH-------LHLISLGHQ----ELDVTQR 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + AL Q D+V+N AA + E D + A +N + ++S + ++
Sbjct: 40 ACLER-ALDRHQADIVINAAAYTAVDNAETDVERAYRVNAIAP--GLMASVCAERGIQML 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G+ + Y E+ P++VYG SK E+ + + ILR+S ++ P
Sbjct: 97 HLSTDYVFDGLAAQPYAEDAPTNPISVYGHSKREGEQAVLRALPSALILRTSRVFSPFGN 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ + + L + S LS D+ P Y + +I+L L R L+
Sbjct: 157 NFLTRLLTLAQERSELS------LVDDQTSGPTYAPHLARIVLQLAERLLA 201
>gi|331086196|ref|ZP_08335278.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406355|gb|EGG85869.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LG+ L Q A H P QL+ + D+D+ +
Sbjct: 2 KKILITGCNGQLGRALNQ-----------FYAKH---PDIQLINTDVE------DLDIAN 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN 121
+ K PD+++NCAA + CE + + A INV P +L S +
Sbjct: 42 ANEVMEYVSKI-HPDIIINCAAYTNVDDCEKNQELAYRINVDGPKNL----SVASNEVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+L+H+S+D VY+G K Y EED+ AP +VYG +K+ + ++ E + I+R++ +YG
Sbjct: 97 VLVHISSDYVYDGRKKEPYLEEDDYAPQSVYGMTKMKGDAYVTEIAHKYFIVRTAWLYGE 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
K+ P+ + + K +++ D+ P +VVK+I
Sbjct: 157 ------GKNFPLTML-KLAEKRKQIAVVMDQIGSPTSAYEVVKVI 194
>gi|146298096|ref|YP_001192687.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101]
gi|146152514|gb|ABQ03368.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101]
Length = 281
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G +G L ST P+ ++F D +
Sbjct: 2 KKILVTGANGQIGSELFV----------------LSTSYPEF-------EWIFADRIKIT 38
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + ++ + P+V+ NC A + E + + A IN + V ++ +T
Sbjct: 39 LDNLELLKIQLNEIKPNVIFNCGAYTDVDKAETEKELAFIINYLA--VELIAKYTYENNV 96
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V++G S EE E P+NVYG+SK+ E ++ N I+R+S +Y
Sbjct: 97 KLIHVSTDYVFDGSSSSALNEEAETNPINVYGESKLKGELACLKENPNSIIIRTSWVY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN--RWLSEDKQ 238
S K+ ++ + ++ + +++ +D+ P Y D+ ++++ + W
Sbjct: 155 ---SKFGKNF-VKTMQRLMLERDEINVVNDQIGSPTYAADLAQVLINIVRFCGWFPG--- 207
Query: 239 MQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ N +S + A + E GYS ++ +++S + P +D K+ +
Sbjct: 208 ---VYNYSNEGEISWYEFALSIKEFGGYSCK-VEGIASSLYHTPAKRPRFSLLDKKKIKE 263
Query: 299 TLNIDPVTYKDGVK 312
T N++ YK +K
Sbjct: 264 TYNLEIPCYKKSLK 277
>gi|407712849|ref|YP_006833414.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
gi|407235033|gb|AFT85232.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ G+P + V T S P P ++ +D++
Sbjct: 3 KVAVMGASGLLGRAIVD---ELAGQPDWQVVGTAFSRPTPNTVV-----------LDVRE 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + PD +V AA P VCE P+ A ++NV + ++ L
Sbjct: 49 ARAIEQF-IDREAPDALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLS 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
I STD V++G + Y+ + E AP+N YG+SK+ E+ + +LR ++YGP
Sbjct: 108 I--STDYVFDGTRPPYRPDSEPAPLNAYGRSKLDGERALAAATDFGCVLRLPLLYGP 162
>gi|227538985|ref|ZP_03969034.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227241188|gb|EEI91203.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 35/313 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+++ G G LG L L K Y H PL Q L+ DL
Sbjct: 2 RIVITGANGQLGSELKDILRNDTEKEYHFLDRKH-LPLDQTLIIQ----------DL--- 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L QPDV+++ AA + E++ + A IN ++ + ++ + LI
Sbjct: 48 -------LAQYQPDVIIHAAAYTAVDRAESEQELADQINHLAT--SEIAQYCRIHGTKLI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+STD V++G + KE+ + P+N+YG +K+ E I + + I+R+S +Y
Sbjct: 99 AISTDYVFDGNSNIPLKEDAPVDPINIYGLTKLKGEHAIQKWLPDGIIIRTSWVYS---- 154
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V + ++ + ++S+ E++ +D+ P Y D+ I+ + + DK + +
Sbjct: 155 --VYGNNFVKTMVRLMSEREEISVINDQIGSPTYAHDLALAIVDI----IESDKWIGGIY 208
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ +S A + EI+G I P+ + + P +D +K+ +D
Sbjct: 209 HYSNEGEISWYDFAVAIREIKGLDCK-INPIPTTQYPTPAKRPRYSLLDKSKIKHAFKVD 267
Query: 304 PVTYKDGVKLTLA 316
+KD +K+ +A
Sbjct: 268 TPNWKDSLKVMIA 280
>gi|315923822|ref|ZP_07920051.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622855|gb|EFV02807.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 27/316 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R LV G G LG ++ +E+ + +D T + P + D P +D+
Sbjct: 2 RFLVTGVGGQLGADVM---AELAARGFDAVGTDLA-PANEAYDDYRP-------LDITDE 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKENLL 123
+ A ++ PDVVV+CAA + E DP++ + V + ++ K L
Sbjct: 51 AAV-ARMIREAAPDVVVHCAAWTAVDAAE-DPENIPKVTAVNADGTRAIAKACAAKGCKL 108
Query: 124 IHLSTDQVYEGVKS--FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I+LSTD V++G S + + + AP+NVYG++K+A E + I+R + ++G
Sbjct: 109 IYLSTDYVFDGKGSAPWQPDNTDYAPLNVYGRTKLAGEAAVRALVDRHFIVRIAWVFGQN 168
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L +V + V +D+ P Y D+ ++++ + +E
Sbjct: 169 GSNFIKTML------AVGRTHDSVRVVNDQIGTPTYTADLARLLVDMAE---TEKYGTYH 219
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
N GG +S A+ + GY+T +I +A P + +D +KL+Q
Sbjct: 220 ATNEGG--YISWCDFAKEIYRQAGYATEVIPVTTAEYGASAAARPFNSRLDKSKLIQNGF 277
Query: 302 IDPVTYKDGVKLTLAA 317
I ++D + L A
Sbjct: 278 IPLPDWRDALSRYLQA 293
>gi|443322031|ref|ZP_21051066.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 73106]
gi|442788234|gb|ELR97932.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 73106]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 118/258 (45%), Gaps = 34/258 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS--FTENKENL---LIHLSTDQ 130
QP+++VN AA + E++ + A LVN L+ E E L LIH+STD
Sbjct: 51 QPEIIVNAAAYTAVDKAESEGELA-------DLVNGLAPQIMAETGETLGASLIHVSTDY 103
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D P+ VYG+SK+ E+ I +++ I+R++ +YG
Sbjct: 104 VFDGTKNTPYLETDSTNPLGVYGRSKLLGEQGIQATQAHYLIVRTAWVYGTYGQQ----- 158
Query: 190 LPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ------ 240
++ ++L G E++ D+ P + D+ + I LT L+ D Q +
Sbjct: 159 ---NFVKTMLRLGKEREELRIVGDQVGSPSWAHDIAQAIAKLTE--LTLDNQQKPSSGVY 213
Query: 241 LLLNVGGPDRVS-RVQMAEVVAEIR-GYSTSLIKPVSASSVDRGVQSPADISMDITKLVQ 298
N G + +A+ ++ + T IKP++ + Q PA + KL Q
Sbjct: 214 HFTNSGVASWYDFTIAIAQESKQLGFPWKTERIKPITTAEYPTPAQRPAYSVLSNRKLNQ 273
Query: 299 TLNIDPVTYKDGVKLTLA 316
L D ++D ++ LA
Sbjct: 274 VLGYDSPYWRDSLRQMLA 291
>gi|389871925|ref|YP_006379344.1| dTDP-4-dehydrorhamnose reductase [Advenella kashmirensis WT001]
gi|388537174|gb|AFK62362.1| dTDP-4-dehydrorhamnose reductase [Advenella kashmirensis WT001]
Length = 322
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 111/248 (44%), Gaps = 15/248 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDV+VN AA + EN+ +A+ +N + V + LLIH STD V++G
Sbjct: 71 PDVIVNAAAYTAVEEAENNQATALLVNAQAPAVL--ARAAAQCGALLIHYSTDYVFDGSG 128
Query: 137 SFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ E +IA PVNVYG SK+AA++ I I R+S +YG Q +Q +
Sbjct: 129 TRPWNETDIARPVNVYGHSKLAADQAIARSGCRHLIFRTSWVYGRQGRG------FLQQM 182
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ-LLLNVGGPDRVSRV 254
+ + + + +D+ P + +I A+ N++ ++ L ++ S
Sbjct: 183 MQLAMRRQCLRVVNDQIGAPTSACLIAEITAAVLNKYRRHPAAIEDGLYHLAASGETSWF 242
Query: 255 QMA-EVVAEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKD 309
A V A +R L + PVS V+ P + ++ +KL T + ++
Sbjct: 243 GYACHVFARMRANGLDLALDRVVPVSTLEYGSAVRRPLNSRLNTSKLAGTFGLSLPCWQQ 302
Query: 310 GVKLTLAA 317
GV T+ A
Sbjct: 303 GVDATVDA 310
>gi|390574243|ref|ZP_10254379.1| dTDP-4-dehydrorhamnose reductase [Burkholderia terrae BS001]
gi|389933732|gb|EIM95724.1| dTDP-4-dehydrorhamnose reductase [Burkholderia terrae BS001]
Length = 305
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 38/309 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ +P + + T S P Q + +D++
Sbjct: 3 KVAVIGASGLLGRAIV---GELTQQPDWQLVQTTFSRPFGQSVT-----------LDIRD 48
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
DAVA + +PD +V AA P VCE+DP A ++NV + V L++
Sbjct: 49 A---DAVAQFVDRERPDALVIAAAERRPDVCEHDPALARALNVDAVRVIALAA--RRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
++ +STD V++G + Y+ + +P+N YG+SK+ E+ + E +LR +++GP
Sbjct: 104 WVLSISTDYVFDGTQPPYRYDATPSPINAYGRSKLEGEQALAESTDLGCVLRLPLLFGPI 163
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSED 236
S V +P + + E D R P Y DV ++ L W + D
Sbjct: 164 VDWQESAVTSLVPAIAASARTASSEVKAAVMDAWAIRYPTYTPDVAVVVRQLLE-WHARD 222
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVA---EIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+ + + G + +++ +A+ +A +I T P A+ P + +D
Sbjct: 223 EAVCGTVQWSGDEPMTKYDIAQRLASALQIDAQLTPQHTPTDATP------RPHNCHLDS 276
Query: 294 TKLVQTLNI 302
T+L +TL I
Sbjct: 277 TRL-ETLGI 284
>gi|423479412|ref|ZP_17456127.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG6X1-1]
gi|402425716|gb|EJV57862.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG6X1-1]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 33/231 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LGQ +L +E +P+++ F ++D+ +
Sbjct: 2 KVLVTGAKGQLGQDVL---CLLENQPWEI------------------FGFGRKELDITNE 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L +PD++++ AA + E+D ++A +N + +L+ E
Sbjct: 41 EQVCEKVLSI-KPDIIIHTAAYTQVDQAESDEETAFKVNAEGT--KYLAKAAETVGARFC 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y+ ED+ P VYGKSK+ E++ E CS + I+R+S ++G
Sbjct: 98 YVSTDYVFDGTKKEPYQTEDQTNPQTVYGKSKLVGEQYTREYCSKYFIVRTSWVFGLYGN 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRW 232
+ V L + + ++ D+ P Y D+ + I+ L TN++
Sbjct: 158 NFVKTMLRL------ADERSELGVVSDQFGSPTYTTDLARFIIELVATNKY 202
>gi|253999153|ref|YP_003051216.1| dTDP-4-dehydrorhamnose reductase [Methylovorus glucosetrophus
SIP3-4]
gi|253985832|gb|ACT50689.1| dTDP-4-dehydrorhamnose reductase [Methylovorus glucosetrophus
SIP3-4]
Length = 301
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E +PD A +IN + + L+ ++H STD V++G
Sbjct: 53 RPDVIVNPAAYTAVDKAETEPDLAYAINAEAPRI--LAEEAAELGARMVHYSTDYVFDGR 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D P+ VYG SK+A EK + + ILR+S +YG K+ +
Sbjct: 111 ASKPYRETDMTNPLGVYGASKLAGEKAVQQAGQQHLILRTSWVYG-----AYGKNF-LHT 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + + + + D+ P D+ L L W E + L N G
Sbjct: 165 ILRLARERDSLGIVADQFGAPTSSHDIASATLTLLKSWQPELSGIYHLTNSG 216
>gi|379723813|ref|YP_005315944.1| protein RmlD [Paenibacillus mucilaginosus 3016]
gi|386726570|ref|YP_006192896.1| protein RmlD [Paenibacillus mucilaginosus K02]
gi|378572485|gb|AFC32795.1| RmlD [Paenibacillus mucilaginosus 3016]
gi|384093695|gb|AFH65131.1| protein RmlD [Paenibacillus mucilaginosus K02]
Length = 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV-PSSLVNWLSSFTENKENLLIHLSTD 129
A +PD V++ AA + E + D+A +N + V W + K ++++STD
Sbjct: 45 AFALHRPDAVIHAAAFTGVDAAEKNLDAAYMVNAFGTRHVAWAAHTIGAK---MVYVSTD 101
Query: 130 QVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
V++G K Y E D AP+ +YG SK+ EKF C I+R+S +YG + V K
Sbjct: 102 YVFDGRKGEPYTEGDRTAPLGIYGNSKLLGEKFTEFLCDRHFIVRTSWLYGLSGSNFVTK 161
Query: 189 SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP 248
L + + + D+ P Y D+ I L +E+ + + N G
Sbjct: 162 VLQLA------KEQGSLRMVSDQYGSPTYTLDLAAQIAELIE---TEEYGVYHVSNRG-- 210
Query: 249 DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
SR++ AE + EI G + ++ V ++ + + P
Sbjct: 211 -FCSRLRFAEAILEIAGLAGVRLEAVESAELSLPAERP 247
>gi|337750774|ref|YP_004644936.1| protein RmlD [Paenibacillus mucilaginosus KNP414]
gi|336301963|gb|AEI45066.1| RmlD [Paenibacillus mucilaginosus KNP414]
Length = 309
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV-PSSLVNWLSSFTENKENLLIHLSTD 129
A +PD V++ AA + E + D+A +N + V W + K ++++STD
Sbjct: 45 AFALHRPDAVIHAAAFTGVDAAEKNLDAAYMVNAFGTRHVAWAAHTIGAK---MVYVSTD 101
Query: 130 QVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
V++G K Y E D AP+ +YG SK+ EKF C I+R+S +YG + V K
Sbjct: 102 YVFDGRKGEPYTEGDRTAPLGIYGNSKLLGEKFTEFLCDRHFIVRTSWLYGLSGSNFVTK 161
Query: 189 SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGP 248
L + + + D+ P Y D+ I L +E+ + + N G
Sbjct: 162 VLQLA------KEQGSLRMVSDQYGSPTYTLDLAAQIAELIE---TEEYGVYHVSNRG-- 210
Query: 249 DRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
SR++ AE + EI G + ++ V ++ + + P
Sbjct: 211 -FCSRLRFAEAILEIAGLAGVRLEAVESAELSLPAERP 247
>gi|255020602|ref|ZP_05292665.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC
51756]
gi|340781131|ref|YP_004747738.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus SM-1]
gi|254969987|gb|EET27486.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC
51756]
gi|340555284|gb|AEK57038.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus SM-1]
Length = 302
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S+KRVLV G G +G+ L Q + P +V DA+ DV
Sbjct: 10 SRKRVLVTGAGGQVGRALAQTV------PAEV--------------DAVFLHRQALDV-- 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENK 119
+ +G A AL +P V++N AA + E++ D A +IN P+ L
Sbjct: 48 -ADAGSVAKALAAHRPQVIINAAAYTAVDRAESEADQAYAINAQGPAHLARAARELGAE- 105
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSII 177
L+H+STD V+ G + Y+ ED AP+N YG SKVA E+ I A ILR+S +
Sbjct: 106 ---LLHISTDFVFSGSQGQPYRPEDPTAPINAYGASKVAGEEAIAAILGEQALILRTSWV 162
Query: 178 YGP 180
Y P
Sbjct: 163 YAP 165
>gi|17545402|ref|NP_518804.1| dTDP-4-dehydrorhamnose reductase oxidoreductase [Ralstonia
solanacearum GMI1000]
gi|17427694|emb|CAD14213.1| probable dtdp-4-dehydrorhamnose reductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 305
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D ++A ++N ++ V L+ +LL+H STD V++G
Sbjct: 58 RPDVIVNPAAYTAVDKAETDAETAFAVNGMAAGV--LAEEARALGSLLVHYSTDYVFDGS 115
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E D + P +VYGKSK+A E+ I + +LR+ + G + L +
Sbjct: 116 KAAAYVETDAVNPQSVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLG- 174
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSEDKQM--QLLLNVGGPDRV 251
+ + + D+ P + + + R WLS D+ L ++
Sbjct: 175 -----RERDSLRVIADQFGAPTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAAAGET 229
Query: 252 SRVQMAEVV---AEIRGYSTSL----IKPVSASSVDRGVQSPADISMDITKLVQTLNIDP 304
+ A V A++RG + I+ + A++ PA+ MD KL +T I
Sbjct: 230 TWHGYATAVLRYAKVRGLELKVDPERIEAIPATAYPLPAPRPANSRMDTGKLTETFGIHL 289
Query: 305 VTYKDGVKLTL 315
++ GV L L
Sbjct: 290 PDWQQGVHLLL 300
>gi|406916406|gb|EKD55423.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 82/191 (42%), Gaps = 15/191 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV+GG G LG LL+ L K +DV T D H +F+VD++
Sbjct: 2 RILVMGGDGMLGHQLLESLQ----KNHDVRITVRQGAKAYQEYDLFNHESSYFNVDVRQD 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V F +P V+N + R ND S + IN + + LS E LI
Sbjct: 58 ENIIPVLEHF-KPHAVINAVGVIKQRQIGNDAISNIEIN--ALFPHRLSHLCETAHARLI 114
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V+ G K Y E D + YGKSK E S+ LR+S+I +
Sbjct: 115 HFSTDCVFSGKKGKYTENDISDATDFYGKSKFLGEV----AASHCLTLRTSVI----GLE 166
Query: 185 PVPKSLPIQWI 195
K+ I+W
Sbjct: 167 LARKASLIEWF 177
>gi|296331422|ref|ZP_06873894.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676407|ref|YP_003868079.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151537|gb|EFG92414.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414651|gb|ADM39770.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 283
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 44/311 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LG L + L + Y+V A L + +++ D +S
Sbjct: 3 KVLVTGAGGQLGLELCRQLKQ---AGYEVIA------LTKKMMNI---------ADQRS- 43
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
V FG QPD+VVN AA + CE + D A SIN + + + +
Sbjct: 44 -----VRYSFGHYQPDIVVNTAAFTSVDKCETELDKAYSINGIGAYYTAMEATRIGAQ-- 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IH+STD V++G + Y+E+D + P +YGKSK E+ I + I+R+S +YG
Sbjct: 97 YIHISTDYVFDGRGTQPYREDDPLDPNTIYGKSKKLGEELIRLATKDSTIIRTSWVYGH- 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
S +Q + + +++ D+ P Y +D+ + ++ L S +
Sbjct: 156 -----GGSNFVQTMLRLAETKQELRVVSDQIGSPTYTKDLAEAVIKL----FSHPPGIYH 206
Query: 242 LLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
+ N G S + A+ + E G +T +I PV+ PA S+ + ++
Sbjct: 207 VSNSG---ICSWYEFAKAIMEDSGLAT-VILPVTTEEYGNKTPRPA-YSVLSHRAIEEAG 261
Query: 302 IDPVTYKDGVK 312
I P +++ ++
Sbjct: 262 IRPRHWREALR 272
>gi|393213832|gb|EJC99327.1| NAD-binding protein [Fomitiporia mediterranea MF3/22]
Length = 322
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K +V+V G +G LG + + V HS +L+ +DLK
Sbjct: 2 KTKVIVTGASGILGSVVYNAFKRDSA--FYVLGLAHSRSNNELV-----------KLDLK 48
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE-NKEN 121
+ + +F +P V++CAA P V E +P+ +N +S+ ++L++ NK N
Sbjct: 49 DEASVERTFAEF-EPGWVIHCAAERRPDVAEKNPEETQKLN--ASVPDYLATLAHPNKLN 105
Query: 122 L-LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE----KFIYEKCSNFAILRSSI 176
L+++STD V++G Y + PVN+YG++K E + + E C +LR +
Sbjct: 106 FKLVYISTDYVFDGTSPPYAPSAQPNPVNLYGRTKRDGESAVLRGVGEGCEG-VVLRVPV 164
Query: 177 IYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+YGP +P I + V+ G++ + H R P V D+ + LT
Sbjct: 165 LYGP---APKNSDTAINILLDVVQDQSGKQYKMDHYATRYPTNVLDIANFLTRLTGL--- 218
Query: 235 EDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISMDI 293
K + +L+ P+ ++ ++ + ++I I P + + S P D +D
Sbjct: 219 -HKPLPPILHFSAPEPFTKYEICLIFSKILSLPHGHIIPDAEAPTGAAAASRPRDCRLDT 277
Query: 294 TK 295
T+
Sbjct: 278 TE 279
>gi|423061921|ref|ZP_17050711.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|406716494|gb|EKD11643.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 KPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG---VT 216
Query: 252 SRVQMAEVV---AEIRGYSTSL--IKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVT 306
S A + A++ G + + P++ + + PA ++ KL L P
Sbjct: 217 SWYDFAIAIFEEAKLLGLPLKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQ 276
Query: 307 YKDGVKLTL 315
++ G++ L
Sbjct: 277 WRSGLRTML 285
>gi|408491199|ref|YP_006867568.1| dTDP-4-dehydrorhamnose reductase RfdB [Psychroflexus torquis ATCC
700755]
gi|408468474|gb|AFU68818.1| dTDP-4-dehydrorhamnose reductase RfdB [Psychroflexus torquis ATCC
700755]
Length = 283
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD VNCAA + E++ +SA +N + V+ L+ E + LIH+STD V++G+
Sbjct: 52 RPDFCVNCAAYTNVEGAEDNENSAFQVNAEA--VHKLAKLCEKFKTKLIHISTDYVFDGL 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E D+ P+NVYG SK E I + + +LR+S +Y +
Sbjct: 110 KNRPYHESDKENPINVYGASKFQGETHITSTMNTYFMLRTSWLYS---------EFGHNF 160
Query: 195 IDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILAL 228
+++L K + ++ P D+ K IL L
Sbjct: 161 FNTILKKAASQHPLNITTEQIGTPTNANDLAKFILHL 197
>gi|421099618|ref|ZP_15560268.1| RmlD substrate binding domain protein [Leptospira borgpetersenii
str. 200901122]
gi|410797379|gb|EKR99488.1| RmlD substrate binding domain protein [Leptospira borgpetersenii
str. 200901122]
Length = 283
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 135/312 (43%), Gaps = 34/312 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+K++ +VGGT +G L S K Y+V + + F+ +DL
Sbjct: 2 RKKIFIVGGTSSIGNSLRNFFS----KNYNVVYSCRVKEKRK-----------FYYIDLA 46
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
++ F D + CA +S ++C+ +P A INV ++ N + F E
Sbjct: 47 ESLNNVKISENF---DYIFFCAGISSMKLCKENPTFAYKINVENTF-NLIERFVELGSK- 101
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+I ST+ V+ G+ F E+ +P+ YG+ K EK I +N +I+R S +
Sbjct: 102 IIFFSTNLVFNGLNPFPDEKCNPSPLCEYGRLKFETEKKIIGLSNNVSIVRLSKVIDRNM 161
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
L +W + L EKV+ F + P+ + + + L W +
Sbjct: 162 ------QLFDRWKNQFLL-NEKVKAFINYKISPISMNYLSNAMGQLLRNWTPG------I 208
Query: 243 LNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQS-PADISMDITKLVQTLN 301
L++ D +S ++A+ +A+ G+ L+ P + D + S P +S+D+ + LN
Sbjct: 209 LHLSSHDEISYFEVAKFIAKKNGFKEDLVDPQTVECSDLFMDSIPYYVSLDMRYTAKMLN 268
Query: 302 IDPVTYKDGVKL 313
I+ ++ + +
Sbjct: 269 INIPSFHEALSF 280
>gi|425772643|gb|EKV11040.1| NAD dependent epimerase/dehydratase family protein [Penicillium
digitatum PHI26]
gi|425775126|gb|EKV13410.1| NAD dependent epimerase/dehydratase family protein [Penicillium
digitatum Pd1]
Length = 314
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 13/238 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +V++CAA P +C+ PD A +NV ++ L+ + + LI++STD V+ G
Sbjct: 61 KPQIVIHCAANKSPDICDKHPDQARKVNVDATRT--LAKECQTRGAFLIYISTDYVFPGT 118
Query: 136 K--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYG-PQTISPVPKS 189
+ + Y+ + E P N+YG+ K E + E +LR ++YG + S +
Sbjct: 119 EGDAPYEADAETKPPNLYGQLKRDGEVAVLEAIKESGMGVVLRVPVLYGNAKENSESAIN 178
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED---KQMQLLLNVG 246
+ + + V+ R P DV ++ + ++L E K +L
Sbjct: 179 TLVDAVQKATDENAGVKMDDWAIRYPTNTEDVARVCRDIVIKYLREKEKRKDFPHILQFS 238
Query: 247 GPDRVSRVQMAEVVAEIRGYST-SLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
DR+++ ++ + +A++ G +T +I + + GV P D + TK + L ID
Sbjct: 239 SEDRMTKYEICQKLAQVLGVATPGMIPNKQGNDPNGGVVRPYDTHLS-TKALTELGID 295
>gi|421483835|ref|ZP_15931408.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
gi|400198118|gb|EJO31081.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 32/181 (17%)
Query: 5 RVLVVGGTGYLGQ---HLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++L++G G +GQ H L L E+ +P L H DVDL
Sbjct: 2 KILLLGKAGQIGQELRHALPALGEV---------------VP------LGHG----DVDL 36
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AL +PDV+VN AA + E D ++A +N + V L+ + ++
Sbjct: 37 RDQDAL-LRALAAHRPDVIVNAAAYTAVDQAETDREAADQVNAQA--VTALAQYAKDASA 93
Query: 122 LLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LL+H STD V++G Y E D P+NVYG +K+ E + E + + R S +Y P
Sbjct: 94 LLVHYSTDYVFDGDSDQPYTETDTPRPLNVYGATKLGGESAVLESGCDALVFRCSWVYAP 153
Query: 181 Q 181
Sbjct: 154 H 154
>gi|220909659|ref|YP_002484970.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
gi|219866270|gb|ACL46609.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 2 SKKRVLVVGGTGYLG---QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S+ ++L++G G +G QH+L SE+ H LP L+ +
Sbjct: 7 SQPKILLLGSQGQVGAELQHILSSASELMALSRAQLDLAHPQRLPDLIAEI--------- 57
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFT 116
QP V++N AA + E++P+ A +N VP+ L +
Sbjct: 58 -----------------QPQVIINAAAYTAVDRAESEPEVAEIVNAKVPTEL----AIAA 96
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
LL+HLSTD V+ G +S Y+E D AP++VYG++K+A E+ I + ILR++
Sbjct: 97 RQCNALLVHLSTDYVFAGQQSTPYRETDPTAPLSVYGQTKLAGEEGIRQVWDRHLILRTA 156
Query: 176 IIYG 179
+YG
Sbjct: 157 WVYG 160
>gi|29726016|gb|AAO88943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 295
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 34/314 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP+ VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLEADPTAPLGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + ++ D+ P Y D+ + + + D +
Sbjct: 160 NFVKTMLRL-----AADTCHELSIVGDQFGGPTYAGDIASALATIARKISKGDSIEYGIY 214
Query: 244 NVGGPDRVSRVQMAEVVAEI---RGYSTS--LIKPVSASSVDRGVQSPADISMDITKLVQ 298
+ G VS Q A+ + ++ +G +S +IK V+ + PA+ M K+
Sbjct: 215 HYSGTPHVSWCQFADAIFDLAVEQGVLSSKPIIKSVTTEQYPTLAKRPANSKMSNKKIEN 274
Query: 299 TLNIDPVTYKDGVK 312
L I + +K
Sbjct: 275 KLGIKGSDWHAALK 288
>gi|300114907|ref|YP_003761482.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113]
gi|299540844|gb|ADJ29161.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113]
Length = 294
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP ++VN AA + E +P+ A++IN + V L+ + LIH STD V++G
Sbjct: 55 QPTLIVNAAAYTAVDKAEEEPEQALAINGKAPGV--LAETARQQGAALIHYSTDYVFDGQ 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ Y+E D P+NVYG++K+A E+ I + ILR+S +YG
Sbjct: 113 GVYPYREGDTPRPLNVYGQTKLAGEQAIAAVGGAYLILRTSWVYG 157
>gi|330819507|ref|YP_004348369.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3]
gi|327371502|gb|AEA62857.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3]
Length = 314
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V+ CAA P VCE DP +A ++NV + ++ E + +STD V++G
Sbjct: 73 RPDAVIVCAAERRPDVCERDPAAARALNVDAPAAI--AARAEAIGAWTLAMSTDYVFDGS 130
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y+E D +P+N YG+ K E + S LR ++YGP I W
Sbjct: 131 APPYRETDLPSPLNAYGRGKADGEAALLAASSRACALRLPLLYGPA----------IDWA 180
Query: 196 DSVLSK------------GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
DS ++ VE R P + DV ++I+ L R + + L
Sbjct: 181 DSAVTSLVPAIVASSRDGAAPVEMDAWATRYPTWTPDVAEVIVQLAER-HAAGAAVTGLC 239
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKL 296
G + +++ ++A +A G LI + + P D +D ++L
Sbjct: 240 QWSGDEPMNKHEIATRIAAALGIVPRLI---AVAEPKDATPRPRDCHLDSSRL 289
>gi|254780921|ref|YP_003065334.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040598|gb|ACT57394.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 290
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+DL F + L F PDV++N AA + E++P+ A SIN + ++ +
Sbjct: 33 DIDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA--IAKAAD 89
Query: 118 NKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ I++STD V++G+ ++ E P+N+YGKSK+A E+ + +N+ ILR++
Sbjct: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-SE 235
+Y + S + + + + ++ D+ P + + I+ + + + +
Sbjct: 150 VYS------IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203
Query: 236 DKQMQLLLNV---GGPDRVSRVQMAEVV---AEIRGYSTSLIKPVSASSVDRGVQSPADI 289
D ++ + ++ GGP VS AE + + RG S + + PA
Sbjct: 204 DTSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261
Query: 290 SMDITKLVQTLNIDPVTYKDGVKLTL 315
+D +KL T NI T+K+GV+ L
Sbjct: 262 CLDCSKLANTHNIRISTWKEGVRNIL 287
>gi|225376962|ref|ZP_03754183.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM
16841]
gi|225211283|gb|EEG93637.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM
16841]
Length = 307
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 17/138 (12%)
Query: 55 VFFDVDLKSGSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV 104
F + D+ G G A+ + + QP+V++NCAA + CE D+A IN
Sbjct: 44 TFINTDVAEGEGVTALDITKIEQVLSLVRAEQPEVIINCAAHTNVDACEKQWDAAYRINA 103
Query: 105 --PSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKF 161
P +L S E +IH+STD V+EG + Y E D PV+ YGK+K+ EKF
Sbjct: 104 LGPRNL----SIAAEAVGAKMIHVSTDYVFEGNGTKPYTEFDAPNPVSAYGKTKLEGEKF 159
Query: 162 IYEKCSNFAILRSSIIYG 179
+ + ++F I R++ +YG
Sbjct: 160 VQQFSNHFFIFRTAWLYG 177
>gi|338974808|ref|ZP_08630164.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231903|gb|EGP07037.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 305
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++ QP +VVN AA + E +P A IN + V L+ T L+H STD V
Sbjct: 51 IRHHQPAIVVNTAAYTAVDKAETEPAKAYRIN--ETAVRLLAEETSRLGAWLVHYSTDYV 108
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG------PQTI 183
++G K S Y E+DE P+NVYG+SK A E+ I E I+RS +Y P+TI
Sbjct: 109 FDGEKASPYTEDDEPHPLNVYGQSKAAGERAIRETGCKHLIIRSGWLYSVHGSNFPRTI 167
>gi|15897732|ref|NP_342337.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2]
gi|6015645|emb|CAB57472.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2]
gi|13814013|gb|AAK41127.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus
P2]
Length = 226
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 35/235 (14%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA++ CE + + A IN + V + + E IH+STD V++G
Sbjct: 9 RPDVIINTAAMTDVDKCEVEREKAYKINAEA--VKHMVRASRVVEAYFIHVSTDYVFDGT 66
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
K YKE+D P+N YG +K+ E F + I S + K P+ ++
Sbjct: 67 KGNYKEDDLPNPINYYGLTKLLGETFALSYDDSLVIRTSGVF--------RHKGFPV-YV 117
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKII---LALTNRWLSEDKQMQLLLNVGGPDRVS 252
L +G+ V F + P+ R + I LAL + LLNV G +R+S
Sbjct: 118 YKTLKEGKTV-FAYKGYYSPISARKLASAIEELLAL---------RKTGLLNVAG-ERIS 166
Query: 253 RVQMAEVVAEIRGYSTSLIKPVSASSVDR----GVQSPADISMDITKLVQTLNID 303
R ++A + E P VD + P D S+D +K + L++D
Sbjct: 167 RYELALKIKE------KFNLPGEVKEVDEVKGWTARRPFDSSLDYSKAKKILSVD 215
>gi|167623451|ref|YP_001673745.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
gi|167353473|gb|ABZ76086.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
Length = 375
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF----DVD 60
RVL+ G G LGQ LL ++E+ V A + P Q+L+ LP +V
Sbjct: 2 RVLITGAAGQLGQALL-SIAELT----QVTAAELTAP-QQMLVALLPEVLACIATTDEVI 55
Query: 61 LKSGSGFDAVALKFGQ-------PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
S D AL Q PDVV+NCAA + E D D A+++N + L+
Sbjct: 56 GVSHQQLDICALHSIQAAFDAFKPDVVINCAAFNGVDKAETDTDKAIAVNATGPKL--LA 113
Query: 114 SFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-I 171
+ L+H+STD V++G +K Y E+D +P++ YG+SK+ E+++ + A I
Sbjct: 114 GECKRLNIRLVHISTDFVFDGALKRPYTEQDMPSPLSAYGRSKLEGERWVNDILGAKATI 173
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+R+S +Y S ++ ++ + + E++ +D+ P + + +I L
Sbjct: 174 IRTSWLY-----SCCGQNF-VKTMQGLFKTRERLSVINDQSGSPTWCETLALVIFKLI-- 225
Query: 232 WLSEDKQMQL 241
KQ QL
Sbjct: 226 -----KQTQL 230
>gi|163859122|ref|YP_001633420.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii DSM 12804]
gi|163262850|emb|CAP45153.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii]
Length = 323
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL + G A+ L+ PD++VN AA + ENDP A +N + V L++
Sbjct: 54 ADLANLDGLRAL-LQAQVPDLIVNAAACTAVDQAENDPAPARRVNAEAVAV--LAAHARK 110
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LL+H STD V++G K Y E D P+N YG+SK+A E+ I +LR+S +
Sbjct: 111 SGALLVHYSTDYVFDGAKQTPYLETDAPHPLNEYGRSKLAGEQAIAASGCRALVLRTSWV 170
Query: 178 Y 178
Y
Sbjct: 171 Y 171
>gi|119944553|ref|YP_942233.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
gi|119863157|gb|ABM02634.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
Length = 295
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL++G TG LG L Q L ++ DV T S + +F VD+
Sbjct: 2 KVLIIGATGMLGYSLFQNLCDV--AHLDVYGTVRSIKGKEPFFSDCEER-LFKGVDVSDL 58
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +AV +K +PDVV+NC L A++IN S L + L+S ++ LI
Sbjct: 59 AAVEAV-IKEIKPDVVINCIGLIKQHSISKQHVDAVAIN--SLLPHQLASLCDSHSCKLI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
H STD +++G K FY EED +++YG+SK E S LR+SII
Sbjct: 116 HFSTDCIFDGKKGFYTEEDTPDALDLYGRSKCLGEV----DSSPHLTLRTSII 164
>gi|404494262|ref|YP_006718368.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380]
gi|77546270|gb|ABA89832.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380]
Length = 314
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV +VG G L + +L+ +D+ A H PQ FD+ +
Sbjct: 5 KRRVAIVGARGMLARMVLRSAPS----EWDIVALSH----PQ------------FDLTDR 44
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ + A QPDV++NCAA + E++ A S+N P + L+ +
Sbjct: 45 ASARMGLSAF---QPDVIINCAAYTDVDGAESNEALAFSVNAVGPGN----LAQVAKELN 97
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIY 178
L+H S+D V+ G K+ Y+E D P ++YGKSK+ E+ I + F I+R+S +Y
Sbjct: 98 ATLVHFSSDYVFGGDKTAPYRETDCPDPRSIYGKSKLQGEQLIQDSGLERFFIVRTSWLY 157
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
GP + V + + + E++ D+ P Y D+ + L L
Sbjct: 158 GPGGKNFVESMI------RLAQQREELRIVADQFGSPTYTADLTQAALNL 201
>gi|386396255|ref|ZP_10081033.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
gi|385736881|gb|EIG57077.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
Length = 328
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P ++N AA + E++P SIN + L+ LIHLSTD V++G K
Sbjct: 55 PSAIINTAAYTAVDQAESEPAKVFSINRDGAAA--LADVAWQMNIPLIHLSTDYVFDGAK 112
Query: 137 -SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP------QTISPVPKS 189
Y+E D AP+NVYG SK+A E + ++R S IY P +T+ + K+
Sbjct: 113 PDAYEESDIPAPLNVYGASKLAGEAAVLAAHPLATVIRCSWIYSPYGGNFVRTMLRLSKT 172
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGP 248
P+ V D+ P Y D+ + +L + R +++D++ + ++ G
Sbjct: 173 QPM------------VRVVGDQHGNPTYAFDLAEAVLRIAERSVTDDRRTTAGIFHLAGQ 220
Query: 249 DRVSRVQMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
S A+ + + RG ++ ++ + P + +D +K + I
Sbjct: 221 GEASWYDFAQAIFDELSRRGARIPALEAITTEEFPTAARRPRNSRLDSSKAERVFGI 277
>gi|381164470|ref|ZP_09873700.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora azurea NA-128]
gi|379256375|gb|EHY90301.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora azurea NA-128]
Length = 313
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 21/283 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GGTG LG+ L L++ G +V A P L P + V DL +G
Sbjct: 11 VLVPGGTGQLGRDL-AALADELGDRVEVVA-----PGSAELDVTEPGAVVEAVSDLAAG- 63
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + G+ VVVN AA + E + +A ++N + L++ ++ L+H
Sbjct: 64 -----AAQSGRRAVVVNAAAYTAVDAAEENEGAAFAVNADGPRM--LAAVCSSRGVPLVH 116
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V+ G Y+ D +AP + YG++K A E + + ++R+S +YG +
Sbjct: 117 VSTDYVFGGDGDRPYEPGDPLAPRSAYGRTKAAGEDAVLGSGARAWVVRTSWVYGASGAN 176
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V + ++ S+ E + D+ P Y D+ + +L L R S D +L+
Sbjct: 177 FVKTMMDLE------SRRETLSVVDDQVGSPTYSADLARGLLELAERITSGDAPQSTVLH 230
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
+ +A V G ++P + R PA
Sbjct: 231 CTNAGETTWFGLARAVFAALGADPERVRPCTTEDFPRPAPRPA 273
>gi|237808787|ref|YP_002893227.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187]
gi|237501048|gb|ACQ93641.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187]
Length = 299
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 15/248 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV+N AA + E + D++ +IN +L+ + + ++H+STD V+ G
Sbjct: 56 QPDVVINAAAHTAVDKAETEIDASFAINRDGP--KYLAEAATSVDAAMLHISTDYVFSGD 113
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D +AP VYG SK+A E+ + S ILR++ ++G + V L +
Sbjct: 114 KDGTYSEADPVAPQGVYGASKLAGEEAVITANSKHIILRTAWVFGEHGNNFVKTMLRLG- 172
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGPDRVSR 253
S+ +++ D+ P Y D+ +L + + ++ + + + G V+
Sbjct: 173 -----SQRDQLGIVADQFGGPTYAGDIAAALLVMAEKAVAAPATVSWGIYHFAGEPHVNW 227
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRG-----VQSPADISMDITKLVQTLNIDPVTYK 308
Q A+ + + L K +++ + PA+ +D K+ I P +
Sbjct: 228 HQFAQAIFDKAVEHKLLAKAPQLNALTTADYPTPAKRPANSRLDCRKIFNEFGIQPSDWH 287
Query: 309 DGVKLTLA 316
++ +A
Sbjct: 288 KALENIVA 295
>gi|340546009|gb|AEK51803.1| methionine adenosyltransferase II beta [Ichthyophis bannanicus]
Length = 211
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP ++V+CAA P V + P++A +NV S ++ LI++STD V++G
Sbjct: 37 QPHLIVHCAAERRPDVVDRLPEAAFQLNVVVS--EKIAKEAARIGAFLIYISTDYVFDGT 94
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E P+N+YGK K EK + + A+LR I+YG + + +S
Sbjct: 95 SPPYSESSVPHPLNLYGKLKFEGEKVVLQNYEGAAVLRVPILYG--DVERLEESAVTILF 152
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
D+V + H + R P +V+DV + L + L +D ++ + + G +++++ +
Sbjct: 153 DNVQFSNKPANMDHWQQRFPTHVKDVASVCRQLAEKRL-QDSSVKGIFHWSGXEQMTKYE 211
>gi|241662192|ref|YP_002980552.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D]
gi|240864219|gb|ACS61880.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 25/259 (9%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ QPDVV+N AA + E +PD+A+++N + V L+ LL+H S+D
Sbjct: 53 AVRAFQPDVVINAAAYTAVDNAETEPDAALAVNGVAPGV--LAEMVRTNGGLLVHYSSDY 110
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K Y E D P +VYG++K+ E+ I +N +LR+S + G +
Sbjct: 111 VFDGAKDCPYLETDVPNPQSVYGRTKLEGERAIAASGANALVLRTSWVAGAHGDN----- 165
Query: 190 LPIQWIDSVLSKGEKVEFFH---DECRCPV---YVRDVVKIILALTNRWLSEDKQMQLLL 243
++ ++L + + + D+ P + DV I+A + D M +
Sbjct: 166 ----FVKAILRQARERKHLRVIADQLGAPTSASLIADVTAQIVARHWVYGERDALMPGVY 221
Query: 244 NVGGPDRVSRVQMA-EVVAEIRGYSTSL------IKPVSASSVDRGVQSPADISMDITKL 296
++ + + A EV+ G L I+ + A PA+ +D +KL
Sbjct: 222 HLAAAGQTTWHGYASEVLRYAAGRCVDLKAAVAGIEAIPAVKWHSRASRPANSCLDTSKL 281
Query: 297 VQTLNIDPVTYKDGVKLTL 315
+T + +++G++ L
Sbjct: 282 RETFGVHLPNWQEGIQCLL 300
>gi|333030052|ref|ZP_08458113.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
gi|332740649|gb|EGJ71131.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
Length = 287
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
D ++NCAA + E +P +N + V+ L+ + + LIH STD V++G K+
Sbjct: 54 DFIINCAAYTAVNAAEENPVDCDKVN--HTAVSNLAKVADEYDAGLIHFSTDYVFDGSKN 111
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII---YGPQTISPVPKSLPIQ 193
Y EED + +YG +K+A+E+ KC+ ++R+S + YG + V K L ++
Sbjct: 112 TPYTEEDPTSARAIYGITKLASERVTLAKCNKAMVIRTSWVYSFYGHNFVKTVLKQLQLR 171
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED--KQMQLLLNVGGPDRV 251
V+ +D+ P Y +D+ K +L + LS D + N G
Sbjct: 172 GSMGVV---------YDQIGTPTYAKDLAKFVLNV----LSTDFIPGLYHYSNEGVCSWF 218
Query: 252 SRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNI 302
+M + A ++G I P+ + PA +D TK+ T NI
Sbjct: 219 DFAKMVQRFAGLKG----EIYPIHSDQYPAKAPRPAYSVLDKTKVKDTYNI 265
>gi|302866789|ref|YP_003835426.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC
27029]
gi|302569648|gb|ADL45850.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC
27029]
Length = 269
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LVVG +G+LG + + + + VA T+HST + + PH D+
Sbjct: 2 RLLVVGASGFLGAEVCR---QAVAAGHRVAGTYHSTAVA--VAGVAPHRL-----DVTDR 51
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + + +PD VV P V + ++ L+
Sbjct: 52 AAVRELLTRV-RPDAVVAT------------PYRYDDWAVTADGAAHIAVAAAEVGARLV 98
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
HLS+D ++ G Y +ED P++ YG +K AAE + ++R+S+I G
Sbjct: 99 HLSSDALHAGRPKPYADEDVPTPLHPYGAAKAAAETAVRAVDPGAVLVRTSLIVG----- 153
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
S IQ L+ + F DE RCPV+V D+ +L L + LLN
Sbjct: 154 --EGSKQIQLCRDALAG--RATLFTDELRCPVHVADLAAAVLELVPGGYAG------LLN 203
Query: 245 VGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLN 301
V GPD VSR +M +VA G ++ + ++ G+ P ++ +D ++ L
Sbjct: 204 VAGPDAVSRAEMGLLVARHDGVDAGGLRTTTIAAA--GLHRPGEVVLDSSRAAGLLR 258
>gi|420254530|ref|ZP_14757526.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. BT03]
gi|398048634|gb|EJL41101.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. BT03]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 38/309 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ +P + + T S P Q + +D++
Sbjct: 3 KVAVIGASGLLGRAIV---GELTQQPDWQLVQTTFSRPFGQSVT-----------LDIRD 48
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
DAVA + +PD +V AA P VCE+DP A ++NV + V ++
Sbjct: 49 A---DAVAQFVDRERPDALVIAAAERRPDVCEHDPALARALNVDA--VRAIALAARRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
++ +STD V++G + Y+ + +P+N YG+SK+ E+ + E +LR +++GP
Sbjct: 104 WVLSISTDYVFDGTQPPYRYDATPSPINAYGRSKLEGEQALAESTDLGCVLRLPLLFGPI 163
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSED 236
S V +P + + E D R P Y DV ++ L W + D
Sbjct: 164 VDWQESAVTSLVPAIAASARTASSEVKAAVMDAWAIRYPTYTPDVAVVVRQLLE-WHARD 222
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVVA---EIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
+ + + G + +++ +A+ +A +I T P A+ P + +D
Sbjct: 223 EAVCGTVQWSGDEPMTKYDIAQRLASALQIDAQLTPQHTPTDATP------RPHNCHLDS 276
Query: 294 TKLVQTLNI 302
T+L +TL I
Sbjct: 277 TRL-ETLGI 284
>gi|298528457|ref|ZP_07015861.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512109|gb|EFI36011.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 286
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 127/311 (40%), Gaps = 48/311 (15%)
Query: 1 MSKKRVLVVGG-TGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M+ VL+ GG TG LGQ L+Q + + EG L AL D+
Sbjct: 1 MNSPTVLIAGGRTGLLGQALVQ-VMQGEG------------------LKALAPGRKELDL 41
Query: 60 DLKSGSGFDAV----ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
FDA ++ D+V N A + E D D A +N L L
Sbjct: 42 -------FDARQVEDTIRKNNIDLVANAVAYTGVDQAEEDQDEAYRLN--RDLPGILGQV 92
Query: 116 TENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILR 173
L+H STD V++G K+ Y +D P+ VYG+SK+A E+ + + ILR
Sbjct: 93 CRENNVGLVHYSTDYVFDGKKNTPYSTDDTPRPLCVYGRSKLAGEELLMQSPWDGLLILR 152
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
S+ ++GP + V K IQ +S G + HD+ P D+ + L L
Sbjct: 153 SAWLFGPFKTNFVSKM--IQMAES----GRPLSVIHDQTGSPTCTLDLARYSLELVK--- 203
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDI 293
KQ L +V + S ++A G S S + PVS+ + + P+ +D
Sbjct: 204 ---KQTSGLFHVVNKGQASWCELASEALMCAGLS-SRVNPVSSGEYPQKARRPSYSVLDT 259
Query: 294 TKLVQTLNIDP 304
+K I P
Sbjct: 260 SKFSMVTGITP 270
>gi|422873197|ref|ZP_16919682.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens F262]
gi|380305582|gb|EIA17859.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens F262]
Length = 294
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 26/309 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L + + + V+ ++ + L +D L D+ S
Sbjct: 2 KILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKL---------DITSL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PDVV+NCAA + CE++ D A +N S L+ E L+
Sbjct: 53 ENVKNV-LNEEKPDVVINCAAATNVDGCESNEDFAFKVN--SLGARNLAMVCEEIGAKLV 109
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+STD V+ GV + E D AP +VYGK+K+ E ++ E CS + I+R++ +YG
Sbjct: 110 QVSTDYVFSGVGEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGH 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V + + + E + +D+ P + D+ IL L + + +
Sbjct: 170 NFVYTMMRLG------KEKESLNVVNDQKGNPTHANDLAYHILKLI------ETEEYGIY 217
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNID 303
+ G + A+ + E+ G + ++ P ++ + P S+D L T+ +
Sbjct: 218 HCTGKGECTWYDFAKEIMELAG-NKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDE 276
Query: 304 PVTYKDGVK 312
+K+ +K
Sbjct: 277 MRDWKEALK 285
>gi|309780787|ref|ZP_07675528.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA]
gi|404394307|ref|ZP_10986111.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_2_56FAA]
gi|308920469|gb|EFP66125.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA]
gi|348613337|gb|EGY62927.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_2_56FAA]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D +A ++N S+ L+ T +LL+H STD V++G
Sbjct: 58 RPDVIVNPAAYTAVDKAETDAQTAFAVN--STAAGVLAEETRALGSLLVHYSTDYVFDGT 115
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P +VYGKSK+A E+ I + + ++R+ + G + L +
Sbjct: 116 KDGAYVETDPVNPQSVYGKSKLAGEEAIAQSGATALVMRTCWVAGAHGGNFAKTMLKLG- 174
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSEDKQMQLLLNVGGPDRVSR 253
+ + + D+ P + + + R WL+ D+ P V
Sbjct: 175 -----RERDSLRVIADQFGAPTTAALIADVTAQIVARAWLAGDR-------AAFPSGVYH 222
Query: 254 VQMAEVVAEIRGYSTSLIKPVSASSVDRGVQ-----------------SPADISMDITKL 296
+ A GY+T++++ A V+ V PA+ M+ KL
Sbjct: 223 LAAAGET-TWHGYATAVLRYAKALGVELKVDPDRIEAIPATAYPLPAPRPANSRMNTGKL 281
Query: 297 VQTLNIDPVTYKDGVKLTL 315
V+T + ++ G+ L L
Sbjct: 282 VETFGVHLPDWQRGIHLLL 300
>gi|257440888|ref|ZP_05616643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
A2-165]
gi|257196668|gb|EEU94952.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
A2-165]
Length = 306
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
Query: 5 RVLVVGGTGYLG----QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+++V G G LG + L +G SEI P+P+ L++A ++D
Sbjct: 2 KIIVTGCKGQLGTEIIKQLREGRSEI-------------GPIPEKLMNATVIPVDLPELD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTEN 118
+ + D ++ +PDV++NCAA + CE + D+A N P +L + E
Sbjct: 49 ISNYKMVDDF-IRRQRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNL----AQAAEK 103
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ + C I+R++
Sbjct: 104 TGARLVHVSTDYVFSGRENGGIAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTA 163
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+Y S K+ ++ I + K K+E +D+C P D+ +L L
Sbjct: 164 WLY-----SYYGKNF-VKTIVNAGRKFGKLEVVNDQCGNPTNAVDLAHELLQL 210
>gi|403252244|ref|ZP_10918554.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
gi|402812257|gb|EJX26736.1| UDP-glucose 4-epimerase [Thermotoga sp. EMP]
Length = 309
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 31/320 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GG G++G H++ L E Y V + L ++ L + +F++ ++
Sbjct: 3 VLVTGGAGFIGSHVVDKLIE---NGYGVIVVDN---LSSGKVENLNRNALFYEQSIEDEE 56
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ + +P+ V + AA + + +P N+ SLV S + +
Sbjct: 57 MMERI-FSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYGVKKFIFS 115
Query: 126 LSTDQVY-EGVKSFYKEEDEI-APVNVYGKSKVAAEK----FIYEKCSNFAILRSSIIYG 179
+ +Y E VK F E EI P++ YG +K + E F E + +LR + +YG
Sbjct: 116 STGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYG 175
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILALTNRWLSEDK 237
P+ P ++ + + +GE+V F D R VYV DVV+ L L+ +K
Sbjct: 176 PRQ-DPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANL------LAMEK 228
Query: 238 QMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTS-LIKPVSASSVDRGVQSPADISMDITKL 296
+ N+G + Q+ +++ EI GY + KP V + + +D TK
Sbjct: 229 GDNEVFNIGTGRGTTVNQLFKMLKEITGYDKEPVYKPPRKGDVRKSI-------LDYTKA 281
Query: 297 VQTLNIDP-VTYKDGVKLTL 315
+ L +P V+ ++G+KLT+
Sbjct: 282 KEKLGWEPKVSLEEGLKLTV 301
>gi|418460841|ref|ZP_13031927.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora azurea SZMC
14600]
gi|359739055|gb|EHK87929.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora azurea SZMC
14600]
Length = 315
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDAL-PHSFVFFDVDLKSG 64
VLV GGTG LG+ L L++ G +V A + LD P + V DL +G
Sbjct: 13 VLVPGGTGQLGRDL-AALADELGDRVEVVAPGSAE------LDVTEPGAVVEAVSDLAAG 65
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A + G+ VVVN AA + E + +A ++N + L++ ++ L+
Sbjct: 66 ------AAQSGRRAVVVNAAAYTAVDAAEENEGAAFAVNADGPRM--LAAVCSSRGVPLV 117
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G Y+ D +AP + YG++K A E + + ++R+S +YG
Sbjct: 118 HVSTDYVFGGDGDRPYEPGDPLAPRSAYGRTKAAGEDAVLGSGARAWVVRTSWVYGASGA 177
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V + ++ S+ E + D+ P Y D+ + +L L R S D +L
Sbjct: 178 NFVKTMMDLE------SRRETLSVVDDQVGSPTYSADLARGLLELAERITSGDAPQSTVL 231
Query: 244 NVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSPA 287
+ + +A V G ++P + R PA
Sbjct: 232 HCTNAGETTWFGLARAVFAALGADPERVRPCTTEDFPRPAPRPA 275
>gi|433441650|ref|ZP_20408597.1| RmlD substrate binding domain superfamily protein, partial
[Haloferax sp. BAB2207]
gi|432186963|gb|ELK44325.1| RmlD substrate binding domain superfamily protein, partial
[Haloferax sp. BAB2207]
Length = 116
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 117 ENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+++E +H STD V++G Y+E+DE AP+ YG+SK+A E + + ++ ILR S
Sbjct: 3 DDREIPFVHYSTDYVFDGETDGLYEEDDEPAPIQEYGRSKLAGEHAVRDVNTDALILRLS 62
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+YG + + P QW+ S L+ G+ V F D+ P +V L L
Sbjct: 63 FVYGARGDTSDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVATTTLEL 114
>gi|104779534|ref|YP_606032.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas entomophila L48]
gi|95108521|emb|CAK13215.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Pseudomonas entomophila L48]
Length = 286
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++ A +IN + V L+ LIH STD V++G
Sbjct: 50 KPDLIINAAAHTAVDQAESEAQLAFAINAEAPRV--LAEEAARLGAPLIHYSTDYVFDGT 107
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K + Y E+D P+ VYG SK+A E+ I + ILR+S +Y Q + + L +Q
Sbjct: 108 KATAYNEDDATNPLGVYGSSKLAGEQAIAKVGGEHLILRTSWVYSLQGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+L + +++ D+ P + + AL RW ++ S
Sbjct: 164 --KLLQERPQLKVVDDQVGAPTWAATIAASTRALVERWRQGQAGAWGTYHLTAQGETSWY 221
Query: 255 QMAEVVAE---IRGYSTSLIKPVSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 311
A + E RG + + P+ +S + P + +D ++L + + + + +
Sbjct: 222 GFALAIGEQLKARGLPCAELLPIPSSEYPTPAKRPLNSRLDCSRLAREWQVSQPHWHEAL 281
>gi|94986107|ref|YP_605471.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM
11300]
gi|94556388|gb|ABF46302.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM
11300]
Length = 723
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 118/286 (41%), Gaps = 37/286 (12%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S + +L+ G TG LG+ + E G PY + + L A P S
Sbjct: 436 SGRPLLITGATGTLGRAFARA-CEQRGLPYHLLSRRE-------LEIADPRS-------- 479
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
A AL +P VVN A E DP + + + L+ +
Sbjct: 480 ------AAAALATYRPWAVVNAAGYVRVDDAERDPRNERENTLGPQV---LAHACAEQGV 530
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ S+D V++G K Y E D P+N YG+SK AAE+ + I+R+S +GP
Sbjct: 531 RLLTFSSDLVFDGRKGKPYVESDTPKPLNAYGRSKRAAEESVLTALPEALIVRTSAFFGP 590
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
P + W+ L G+ V D+ P YV D+ L L + + +
Sbjct: 591 WD----PYNF-ATWVWRELRAGQPVRVADDQVVSPTYVPDLTHAALDLL---IDSESGLW 642
Query: 241 LLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKPVSASSVDRGVQSP 286
L N G VS A++VA + G +L++PV +++++ P
Sbjct: 643 HLANAGA---VSWAAFAQLVAGVTGLDAALVEPVPSAALNLSAARP 685
>gi|386078984|ref|YP_005992509.1| dTDP-4-dehydrorhamnose reductase RfbD [Pantoea ananatis PA13]
gi|354988165|gb|AER32289.1| dTDP-4-dehydrorhamnose reductase RfbD [Pantoea ananatis PA13]
Length = 288
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 26/287 (9%)
Query: 42 LPQLLLDALPHSFVFF-----DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDP 96
L + LLD P ++ ++D+ V KF +PDV++N AA + E D
Sbjct: 12 LGRCLLDRFPADWITLACGSAELDITDRCAVMRVVKKF-KPDVIMNAAAYTAVDKAETDR 70
Query: 97 DSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGK 153
A+ +N P +L + + LIH+STD V++G+K + Y E D P+N YG
Sbjct: 71 TRALKVNAIGPENL----AQAAKLVNARLIHISTDYVFDGLKKTTYSENDPPCPINFYGL 126
Query: 154 SKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR 213
SK EK ++E ++R+S ++ + V L + S ++ +D+
Sbjct: 127 SKWEGEKRVFEVLPEAIVIRTSWMFSEYGNNFVSTMLRLAQTRS------ELHVVNDQYG 180
Query: 214 CPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVVAEIRGYSTSLIKP 273
CP Y D+ + ++ L + + E + L + G VS + A+ + + ++
Sbjct: 181 CPTYAGDLAQAMITLAD--MPEKRG---LYHYCGDVAVSWCEFAQTIF-VAAQQDVVVHG 234
Query: 274 VSASSVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT 320
+ +S PA M+ + + T+ I P ++D ++L L AT
Sbjct: 235 IISSHYPSAAIRPARSVMN-SDALSTIGIHPSDWQDKLRLCLNHLAT 280
>gi|29726001|gb|AAO88931.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + CS ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,972,092,988
Number of Sequences: 23463169
Number of extensions: 205699652
Number of successful extensions: 580762
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 12166
Number of HSP's that attempted gapping in prelim test: 567389
Number of HSP's gapped (non-prelim): 14618
length of query: 320
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 178
effective length of database: 9,027,425,369
effective search space: 1606881715682
effective search space used: 1606881715682
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)