Query 020887
Match_columns 320
No_of_seqs 200 out of 1875
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:56:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020887.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020887hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02287 3-ketoacyl-CoA thiola 100.0 4.6E-62 1E-66 481.2 31.8 317 1-320 1-317 (452)
2 PF00108 Thiolase_N: Thiolase, 100.0 9.3E-54 2E-58 396.2 22.4 252 48-306 1-264 (264)
3 PRK07850 acetyl-CoA acetyltran 100.0 9.1E-52 2E-56 401.8 28.8 263 49-320 2-271 (387)
4 PRK06504 acetyl-CoA acetyltran 100.0 1.1E-51 2.4E-56 401.3 27.8 265 49-320 2-274 (390)
5 PRK08235 acetyl-CoA acetyltran 100.0 1E-51 2.3E-56 402.3 27.4 265 49-320 2-277 (393)
6 PRK09052 acetyl-CoA acetyltran 100.0 2.9E-51 6.2E-56 399.7 29.0 274 46-320 3-283 (399)
7 PRK09051 beta-ketothiolase; Pr 100.0 3.1E-51 6.7E-56 399.0 28.3 264 49-320 3-278 (394)
8 PRK08242 acetyl-CoA acetyltran 100.0 5.3E-51 1.1E-55 397.5 28.4 262 49-320 2-286 (402)
9 PRK06366 acetyl-CoA acetyltran 100.0 3.2E-51 7E-56 398.4 25.6 255 49-320 2-271 (388)
10 PRK13359 beta-ketoadipyl CoA t 100.0 7.7E-51 1.7E-55 396.5 27.8 265 49-320 2-282 (400)
11 PRK08963 fadI 3-ketoacyl-CoA t 100.0 5.4E-51 1.2E-55 401.3 26.9 263 48-320 4-294 (428)
12 TIGR02446 FadI fatty oxidation 100.0 5.5E-51 1.2E-55 400.8 26.4 264 47-320 5-296 (430)
13 PRK09050 beta-ketoadipyl CoA t 100.0 1E-50 2.2E-55 395.9 27.9 266 49-320 2-283 (401)
14 PRK06633 acetyl-CoA acetyltran 100.0 5.8E-51 1.3E-55 396.2 25.5 263 49-320 3-276 (392)
15 PRK08947 fadA 3-ketoacyl-CoA t 100.0 9.8E-51 2.1E-55 394.7 27.0 265 49-320 2-268 (387)
16 PRK07661 acetyl-CoA acetyltran 100.0 1.9E-50 4.2E-55 393.0 28.3 269 49-320 2-275 (391)
17 TIGR02445 fadA fatty oxidation 100.0 1.1E-50 2.4E-55 394.1 25.7 264 50-320 1-266 (385)
18 PRK06205 acetyl-CoA acetyltran 100.0 2.8E-50 6E-55 393.8 28.2 265 49-320 2-284 (404)
19 PRK06025 acetyl-CoA acetyltran 100.0 4.2E-50 9.1E-55 390.6 28.4 264 49-320 2-301 (417)
20 PRK08131 acetyl-CoA acetyltran 100.0 1.2E-49 2.6E-54 388.4 29.0 266 49-320 2-282 (401)
21 TIGR02430 pcaF beta-ketoadipyl 100.0 9.2E-50 2E-54 388.9 27.5 266 49-320 1-282 (400)
22 PRK05656 acetyl-CoA acetyltran 100.0 1.5E-49 3.2E-54 387.3 28.1 264 49-320 2-277 (393)
23 KOG1389 3-oxoacyl CoA thiolase 100.0 1.8E-50 4E-55 368.4 20.1 304 4-319 1-305 (435)
24 PRK07108 acetyl-CoA acetyltran 100.0 3.1E-49 6.7E-54 384.7 29.5 270 49-320 2-276 (392)
25 PRK08170 acetyl-CoA acetyltran 100.0 3.5E-49 7.5E-54 388.3 26.9 261 48-320 2-293 (426)
26 PRK06445 acetyl-CoA acetyltran 100.0 7.2E-49 1.6E-53 382.7 26.8 264 49-320 2-278 (394)
27 PRK06954 acetyl-CoA acetyltran 100.0 2.4E-48 5.1E-53 379.3 28.3 268 44-320 2-281 (397)
28 PRK09268 acetyl-CoA acetyltran 100.0 2.5E-48 5.5E-53 381.8 27.2 256 48-319 6-290 (427)
29 PRK05790 putative acyltransfer 100.0 6.7E-48 1.4E-52 375.8 28.5 265 49-320 2-277 (393)
30 cd00751 thiolase Thiolase are 100.0 2E-46 4.3E-51 364.7 26.1 261 52-320 1-271 (386)
31 KOG1390 Acetyl-CoA acetyltrans 100.0 2.4E-47 5.2E-52 349.0 17.9 266 46-320 3-280 (396)
32 KOG1391 Acetyl-CoA acetyltrans 100.0 6.6E-47 1.4E-51 338.1 18.1 265 48-320 3-279 (396)
33 PRK07801 acetyl-CoA acetyltran 100.0 8.7E-46 1.9E-50 359.7 26.1 253 49-320 2-266 (382)
34 PRK06690 acetyl-CoA acetyltran 100.0 2.2E-45 4.8E-50 353.5 25.7 242 50-320 2-244 (361)
35 TIGR01930 AcCoA-C-Actrans acet 100.0 2.2E-45 4.7E-50 357.3 26.0 260 53-320 1-272 (386)
36 PRK07851 acetyl-CoA acetyltran 100.0 4.4E-44 9.4E-49 350.1 27.5 262 49-320 2-289 (406)
37 PLN02644 acetyl-CoA C-acetyltr 100.0 5.6E-44 1.2E-48 348.3 28.0 263 49-320 1-277 (394)
38 PRK06157 acetyl-CoA acetyltran 100.0 6.8E-42 1.5E-46 334.0 22.3 231 49-320 7-243 (398)
39 PRK06365 acetyl-CoA acetyltran 100.0 8.1E-42 1.8E-46 336.2 21.2 228 49-317 16-249 (430)
40 PRK06066 acetyl-CoA acetyltran 100.0 3.7E-41 8E-46 326.7 21.9 229 47-319 2-235 (385)
41 COG0183 PaaJ Acetyl-CoA acetyl 100.0 1.2E-41 2.5E-46 331.4 16.5 261 48-319 1-272 (392)
42 PRK06065 acetyl-CoA acetyltran 100.0 8.5E-41 1.8E-45 325.3 21.8 228 49-317 9-240 (392)
43 PRK12578 acetyl-CoA acetyltran 100.0 1.1E-40 2.4E-45 324.2 21.7 230 49-320 1-236 (385)
44 PRK08313 acetyl-CoA acetyltran 100.0 1.4E-40 3.1E-45 323.5 21.6 231 48-320 2-235 (386)
45 PRK08256 lipid-transfer protei 100.0 2.4E-40 5.2E-45 322.5 21.2 228 50-320 2-240 (391)
46 PRK06059 lipid-transfer protei 100.0 3.9E-40 8.5E-45 321.8 21.6 231 49-320 4-240 (399)
47 PRK06064 acetyl-CoA acetyltran 100.0 6.7E-40 1.5E-44 319.1 21.0 230 49-320 2-237 (389)
48 PRK06158 thiolase; Provisional 100.0 1E-39 2.2E-44 317.4 20.6 223 49-316 8-231 (384)
49 PRK06289 acetyl-CoA acetyltran 100.0 1.6E-39 3.4E-44 317.9 20.2 240 49-320 3-250 (403)
50 PTZ00455 3-ketoacyl-CoA thiola 100.0 5.1E-39 1.1E-43 316.6 21.9 248 49-320 12-289 (438)
51 PRK07855 lipid-transfer protei 100.0 5E-39 1.1E-43 312.6 21.1 226 49-319 4-240 (386)
52 PRK08142 acetyl-CoA acetyltran 100.0 1.3E-38 2.7E-43 309.7 20.2 225 48-319 4-235 (388)
53 PRK07937 lipid-transfer protei 100.0 1.6E-38 3.5E-43 305.2 20.7 225 49-320 2-230 (352)
54 cd00829 SCP-x_thiolase Thiolas 100.0 1.4E-38 3E-43 307.9 20.3 225 54-320 1-230 (375)
55 PRK07516 acetyl-CoA acetyltran 100.0 1.8E-38 3.9E-43 309.1 20.7 230 48-319 1-239 (389)
56 cd00826 nondecarbox_cond_enzym 100.0 1.5E-36 3.2E-41 296.0 13.5 226 54-313 1-237 (393)
57 PRK08257 acetyl-CoA acetyltran 100.0 1E-32 2.2E-37 275.9 22.4 226 47-313 2-262 (498)
58 KOG1392 Acetyl-CoA acetyltrans 100.0 2.5E-32 5.4E-37 247.8 11.3 264 44-319 37-328 (465)
59 KOG1406 Peroxisomal 3-ketoacyl 100.0 8.9E-31 1.9E-35 235.3 8.9 230 44-314 1-241 (408)
60 cd00825 decarbox_cond_enzymes 99.5 7.5E-14 1.6E-18 132.2 11.6 103 50-168 1-127 (332)
61 cd00327 cond_enzymes Condensin 99.5 1.6E-13 3.5E-18 125.0 13.3 93 72-166 5-97 (254)
62 COG0332 FabH 3-oxoacyl-[acyl-c 99.5 7.5E-14 1.6E-18 132.2 10.5 120 46-170 27-146 (323)
63 PRK07314 3-oxoacyl-(acyl carri 99.4 3.9E-13 8.4E-18 131.8 10.9 93 74-168 72-193 (411)
64 TIGR03150 fabF beta-ketoacyl-a 99.4 3.8E-13 8.2E-18 131.4 10.6 93 74-168 71-192 (407)
65 PRK09352 3-oxoacyl-(acyl carri 99.4 3.6E-12 7.7E-17 120.6 10.5 109 58-169 37-145 (319)
66 smart00825 PKS_KS Beta-ketoacy 99.3 6.6E-12 1.4E-16 123.4 12.4 92 74-167 87-200 (424)
67 CHL00203 fabH 3-oxoacyl-acyl-c 99.3 4.3E-12 9.4E-17 120.9 10.6 114 51-170 31-144 (326)
68 PLN02836 3-oxoacyl-[acyl-carri 99.3 8E-12 1.7E-16 123.9 12.6 92 74-167 93-214 (437)
69 PRK06333 3-oxoacyl-(acyl carri 99.3 6.1E-12 1.3E-16 124.0 10.2 92 74-167 82-203 (424)
70 cd00827 init_cond_enzymes "ini 99.3 8.1E-12 1.8E-16 118.1 10.2 110 54-171 34-143 (324)
71 cd00828 elong_cond_enzymes "el 99.3 1.2E-11 2.6E-16 121.0 10.6 95 73-168 71-193 (407)
72 TIGR00747 fabH 3-oxoacyl-(acyl 99.3 1.2E-11 2.6E-16 117.1 10.1 108 58-168 36-143 (318)
73 PTZ00050 3-oxoacyl-acyl carrie 99.3 1.5E-11 3.2E-16 121.4 11.2 94 72-167 75-198 (421)
74 PRK09258 3-oxoacyl-(acyl carri 99.3 1.7E-11 3.6E-16 117.1 9.9 99 70-169 57-155 (338)
75 TIGR00748 HMG_CoA_syn_Arc hydr 99.2 2.5E-11 5.5E-16 116.7 9.9 99 70-169 46-144 (345)
76 PRK08722 3-oxoacyl-(acyl carri 99.2 5.2E-11 1.1E-15 117.3 11.5 92 74-167 74-194 (414)
77 PLN02326 3-oxoacyl-[acyl-carri 99.2 5.9E-11 1.3E-15 115.6 10.9 109 57-169 80-188 (379)
78 PRK12879 3-oxoacyl-(acyl carri 99.2 6.1E-11 1.3E-15 112.5 10.7 99 70-170 49-147 (325)
79 cd00834 KAS_I_II Beta-ketoacyl 99.2 6.2E-11 1.3E-15 115.6 10.9 94 73-168 70-192 (406)
80 cd00830 KAS_III Ketoacyl-acyl 99.2 6.2E-11 1.3E-15 111.9 10.5 98 70-169 46-143 (320)
81 cd00833 PKS polyketide synthas 99.2 1.9E-10 4.1E-15 112.7 14.0 92 74-167 87-200 (421)
82 PRK06816 3-oxoacyl-(acyl carri 99.2 6.9E-11 1.5E-15 115.0 10.8 96 72-169 61-156 (378)
83 PRK14691 3-oxoacyl-(acyl carri 99.2 1.5E-10 3.4E-15 111.2 13.0 91 74-167 4-121 (342)
84 TIGR02845 spore_V_AD stage V s 99.2 9.6E-11 2.1E-15 110.3 10.3 92 69-168 45-136 (327)
85 PRK07204 3-oxoacyl-(acyl carri 99.2 9.6E-11 2.1E-15 111.6 10.3 98 71-169 49-147 (329)
86 PRK04262 hypothetical protein; 99.2 7.9E-11 1.7E-15 113.3 9.6 97 70-167 47-143 (347)
87 PRK07515 3-oxoacyl-(acyl carri 99.2 1.3E-10 2.7E-15 112.9 9.6 94 73-169 94-187 (372)
88 PRK12880 3-oxoacyl-(acyl carri 99.1 1.6E-10 3.5E-15 111.6 9.7 98 70-169 56-153 (353)
89 PRK08304 stage V sporulation p 99.1 1.9E-10 4.1E-15 108.7 9.5 93 70-170 52-144 (337)
90 PRK07103 polyketide beta-ketoa 99.1 1.7E-10 3.6E-15 113.5 8.7 91 74-166 80-196 (410)
91 PRK06840 hypothetical protein; 99.1 6E-10 1.3E-14 106.6 10.1 98 70-169 49-148 (339)
92 PRK05952 3-oxoacyl-(acyl carri 99.1 1.5E-09 3.2E-14 105.9 12.8 89 76-166 58-175 (381)
93 PLN02787 3-oxoacyl-[acyl-carri 99.0 2.5E-09 5.4E-14 108.4 14.0 90 76-167 201-321 (540)
94 PRK05963 3-oxoacyl-(acyl carri 99.0 8.6E-10 1.9E-14 104.9 9.9 97 70-169 48-144 (326)
95 PRK07910 3-oxoacyl-(acyl carri 99.0 3.5E-09 7.5E-14 104.5 13.1 92 74-167 83-201 (418)
96 cd00831 CHS_like Chalcone and 99.0 1.3E-09 2.8E-14 105.2 9.2 96 72-169 83-179 (361)
97 PRK12404 stage V sporulation p 99.0 9.5E-10 2.1E-14 103.4 7.9 98 70-175 50-153 (334)
98 TIGR01835 HMG-CoA-S_prok 3-hyd 99.0 1.7E-09 3.6E-14 105.4 10.0 111 51-168 30-140 (379)
99 PLN03168 chalcone synthase; Pr 99.0 1.9E-09 4.2E-14 105.4 9.8 95 73-169 100-195 (389)
100 PRK06501 3-oxoacyl-(acyl carri 99.0 8.1E-09 1.7E-13 102.1 13.5 91 74-166 75-204 (425)
101 PLN02932 3-ketoacyl-CoA syntha 98.9 3.6E-09 7.7E-14 105.5 10.1 95 74-170 148-243 (478)
102 PLN03169 chalcone synthase fam 98.9 5.2E-09 1.1E-13 102.5 8.4 96 71-168 103-199 (391)
103 PRK06519 3-oxoacyl-(acyl carri 98.9 1.5E-08 3.2E-13 99.5 11.0 92 74-167 73-205 (398)
104 PRK08439 3-oxoacyl-(acyl carri 98.9 9.7E-09 2.1E-13 100.9 9.6 92 74-167 72-192 (406)
105 PF00109 ketoacyl-synt: Beta-k 98.9 8.5E-09 1.9E-13 94.1 8.5 91 74-166 87-205 (254)
106 PLN03172 chalcone synthase fam 98.8 1.4E-08 3E-13 99.5 9.9 93 74-168 102-195 (393)
107 PLN03171 chalcone synthase-lik 98.8 1.3E-08 2.8E-13 99.9 9.7 95 73-169 107-202 (399)
108 PLN03170 chalcone synthase; Pr 98.8 8E-09 1.7E-13 101.4 8.0 94 74-169 106-200 (401)
109 PLN02377 3-ketoacyl-CoA syntha 98.8 1.5E-08 3.2E-13 101.7 9.9 96 73-170 171-267 (502)
110 PLN02577 hydroxymethylglutaryl 98.8 1.1E-08 2.3E-13 101.8 8.7 98 70-169 49-151 (459)
111 PRK07967 3-oxoacyl-(acyl carri 98.8 1.4E-08 3.1E-13 99.8 9.5 93 74-168 71-193 (406)
112 PLN03173 chalcone synthase; Pr 98.8 1.4E-08 3.1E-13 99.3 9.3 93 74-168 102-195 (391)
113 PLN02192 3-ketoacyl-CoA syntha 98.8 1.9E-08 4.1E-13 100.8 10.1 92 75-168 177-269 (511)
114 PRK06147 3-oxoacyl-(acyl carri 98.8 3.1E-08 6.8E-13 95.5 10.4 98 72-169 63-165 (348)
115 TIGR01833 HMG-CoA-S_euk 3-hydr 98.7 4.8E-08 1E-12 97.0 9.7 96 70-167 46-146 (454)
116 PRK09116 3-oxoacyl-(acyl carri 98.7 5.8E-08 1.3E-12 95.5 9.4 93 74-168 73-195 (405)
117 PLN02854 3-ketoacyl-CoA syntha 98.7 7.4E-08 1.6E-12 96.8 9.5 92 75-168 189-281 (521)
118 cd00832 CLF Chain-length facto 98.6 1.4E-07 3E-12 92.6 10.2 91 74-167 71-190 (399)
119 COG0304 FabB 3-oxoacyl-(acyl-c 98.6 1.8E-07 3.9E-12 91.9 8.4 92 73-166 70-191 (412)
120 PLN00415 3-ketoacyl-CoA syntha 98.5 3.2E-07 6.9E-12 90.9 9.6 96 72-169 131-228 (466)
121 COG3321 Polyketide synthase mo 98.5 2.8E-07 6.1E-12 100.3 9.6 92 74-167 91-204 (1061)
122 KOG1394 3-oxoacyl-(acyl-carrie 98.5 8.1E-08 1.8E-12 90.8 4.3 92 74-167 94-217 (440)
123 TIGR02813 omega_3_PfaA polyket 98.4 6.2E-07 1.3E-11 104.4 10.0 89 75-166 94-235 (2582)
124 COG3425 PksG 3-hydroxy-3-methy 98.4 5E-07 1.1E-11 86.8 6.7 99 70-169 47-145 (377)
125 PF08392 FAE1_CUT1_RppA: FAE1/ 98.3 3.7E-06 8E-11 78.5 10.2 97 74-172 83-180 (290)
126 PF00195 Chal_sti_synt_N: Chal 98.3 4.1E-06 8.9E-11 75.9 9.1 94 73-168 99-193 (226)
127 PF01154 HMG_CoA_synt_N: Hydro 98.1 6.6E-06 1.4E-10 71.4 5.7 97 70-167 49-149 (174)
128 PRK09185 3-oxoacyl-(acyl carri 98.1 2E-05 4.4E-10 77.2 9.6 53 114-168 139-191 (392)
129 COG3424 BcsA Predicted naringe 97.8 7.8E-05 1.7E-09 69.7 8.9 93 74-168 76-169 (356)
130 KOG1202 Animal-type fatty acid 97.7 2.1E-05 4.6E-10 83.8 3.4 91 74-166 87-199 (2376)
131 PF07451 SpoVAD: Stage V sporu 97.4 0.00088 1.9E-08 62.8 9.6 84 74-165 51-134 (329)
132 PF08545 ACP_syn_III: 3-Oxoacy 97.1 0.00074 1.6E-08 51.1 4.5 39 131-169 1-39 (80)
133 COG0183 PaaJ Acetyl-CoA acetyl 96.5 0.00066 1.4E-08 66.7 -0.1 48 245-307 187-234 (392)
134 PF13723 Ketoacyl-synt_2: Beta 94.5 0.39 8.5E-06 43.4 10.2 92 74-172 34-148 (218)
135 PRK08257 acetyl-CoA acetyltran 90.7 1.3 2.8E-05 45.0 9.0 109 48-163 265-382 (498)
136 cd00829 SCP-x_thiolase Thiolas 88.1 3.7 7.9E-05 39.6 9.7 54 47-101 223-276 (375)
137 PF08541 ACP_syn_III_C: 3-Oxoa 87.3 0.53 1.2E-05 35.8 2.7 73 86-166 1-79 (90)
138 PRK06816 3-oxoacyl-(acyl carri 87.0 3.7 8.1E-05 39.9 9.0 83 78-166 274-365 (378)
139 KOG1393 Hydroxymethylglutaryl- 85.9 5.6 0.00012 38.8 9.2 100 50-156 40-143 (462)
140 PRK05963 3-oxoacyl-(acyl carri 85.9 2.3 4.9E-05 40.2 6.8 83 76-164 227-313 (326)
141 PRK07204 3-oxoacyl-(acyl carri 85.6 2.6 5.7E-05 39.8 7.0 81 78-164 232-316 (329)
142 TIGR00748 HMG_CoA_syn_Arc hydr 84.8 1.9 4.2E-05 41.4 5.7 84 74-165 206-295 (345)
143 PRK06064 acetyl-CoA acetyltran 84.4 7.9 0.00017 37.8 9.9 53 48-101 231-283 (389)
144 PTZ00455 3-ketoacyl-CoA thiola 83.8 6.4 0.00014 39.3 9.1 96 49-152 284-403 (438)
145 cd00825 decarbox_cond_enzymes 82.7 11 0.00024 35.2 10.0 79 75-154 204-286 (332)
146 PRK09258 3-oxoacyl-(acyl carri 81.7 4.7 0.0001 38.2 7.0 84 76-165 239-326 (338)
147 PLN02326 3-oxoacyl-[acyl-carri 81.3 4.6 9.9E-05 39.4 6.9 81 78-164 282-366 (379)
148 PRK09050 beta-ketoadipyl CoA t 80.5 7.7 0.00017 38.3 8.2 97 50-160 279-383 (401)
149 COG1214 Inactive homolog of me 80.1 6.9 0.00015 35.3 7.2 77 72-161 35-115 (220)
150 CHL00203 fabH 3-oxoacyl-acyl-c 80.0 3.6 7.8E-05 39.0 5.6 81 78-164 228-312 (326)
151 cd00327 cond_enzymes Condensin 79.6 8.5 0.00018 34.5 7.7 89 74-164 143-243 (254)
152 PRK06158 thiolase; Provisional 79.6 12 0.00027 36.5 9.3 52 48-101 228-279 (384)
153 PRK06066 acetyl-CoA acetyltran 79.1 14 0.0003 36.3 9.5 52 48-101 230-283 (385)
154 PRK04262 hypothetical protein; 78.6 3.2 6.9E-05 39.9 4.8 81 76-164 209-295 (347)
155 PF02801 Ketoacyl-synt_C: Beta 78.5 6 0.00013 31.8 5.7 78 76-154 25-110 (119)
156 PRK12578 acetyl-CoA acetyltran 78.4 10 0.00022 37.0 8.3 98 48-152 230-351 (385)
157 TIGR02430 pcaF beta-ketoadipyl 77.5 11 0.00025 37.1 8.4 97 49-159 277-381 (400)
158 TIGR00747 fabH 3-oxoacyl-(acyl 77.4 8.1 0.00018 36.2 7.1 81 78-164 221-305 (318)
159 PRK08256 lipid-transfer protei 77.1 17 0.00037 35.5 9.4 99 48-152 234-358 (391)
160 PRK09185 3-oxoacyl-(acyl carri 76.6 16 0.00035 35.7 9.1 114 36-155 222-341 (392)
161 PRK06147 3-oxoacyl-(acyl carri 76.5 9.8 0.00021 36.6 7.5 88 76-164 234-329 (348)
162 PRK06519 3-oxoacyl-(acyl carri 76.4 8.8 0.00019 37.8 7.2 78 77-156 281-359 (398)
163 PRK07937 lipid-transfer protei 76.1 18 0.0004 35.0 9.3 104 48-163 224-334 (352)
164 PRK08142 acetyl-CoA acetyltran 75.2 29 0.00063 34.0 10.5 50 48-100 230-279 (388)
165 PRK07314 3-oxoacyl-(acyl carri 75.2 9.9 0.00022 37.2 7.3 102 50-155 253-360 (411)
166 TIGR03150 fabF beta-ketoacyl-a 74.5 12 0.00026 36.4 7.6 100 51-155 253-359 (407)
167 TIGR01930 AcCoA-C-Actrans acet 73.5 13 0.00027 36.4 7.5 95 51-161 269-371 (386)
168 PRK12879 3-oxoacyl-(acyl carri 73.3 10 0.00022 35.7 6.6 80 79-164 228-311 (325)
169 cd00830 KAS_III Ketoacyl-acyl 72.9 9.6 0.00021 35.6 6.3 83 76-164 223-309 (320)
170 PRK07855 lipid-transfer protei 72.7 27 0.00058 34.2 9.5 54 48-101 235-291 (386)
171 PRK13359 beta-ketoadipyl CoA t 72.7 17 0.00036 35.9 8.1 96 50-159 278-381 (400)
172 PRK06840 hypothetical protein; 72.3 12 0.00026 35.6 6.9 43 78-126 239-281 (339)
173 PLN02836 3-oxoacyl-[acyl-carri 71.8 44 0.00095 33.2 11.0 102 50-155 276-385 (437)
174 PRK06289 acetyl-CoA acetyltran 71.0 42 0.00091 32.9 10.6 98 49-152 245-370 (403)
175 PRK12880 3-oxoacyl-(acyl carri 70.2 11 0.00023 36.5 6.1 80 77-162 243-324 (353)
176 COG0332 FabH 3-oxoacyl-[acyl-c 70.0 4.1 8.9E-05 39.1 3.1 83 75-163 222-308 (323)
177 TIGR03725 bact_YeaZ universal 69.4 5.9 0.00013 35.1 3.8 65 72-146 31-99 (202)
178 PRK06157 acetyl-CoA acetyltran 68.3 53 0.0011 32.3 10.6 49 49-101 238-293 (398)
179 cd00834 KAS_I_II Beta-ketoacyl 68.1 27 0.00058 33.8 8.4 79 76-155 275-359 (406)
180 PRK14691 3-oxoacyl-(acyl carri 67.9 26 0.00056 33.8 8.1 101 50-155 183-289 (342)
181 PRK07108 acetyl-CoA acetyltran 67.5 1.6 3.5E-05 42.9 -0.3 35 197-231 160-205 (392)
182 PRK09051 beta-ketothiolase; Pr 67.3 28 0.00061 34.2 8.4 92 51-158 275-374 (394)
183 PRK07516 acetyl-CoA acetyltran 66.9 27 0.00059 34.0 8.2 51 49-101 235-285 (389)
184 cd00832 CLF Chain-length facto 65.6 27 0.00059 34.2 8.0 97 51-155 251-352 (399)
185 PRK06690 acetyl-CoA acetyltran 64.9 20 0.00044 34.9 6.8 96 49-158 238-340 (361)
186 PRK08242 acetyl-CoA acetyltran 64.4 38 0.00082 33.5 8.7 89 49-153 281-377 (402)
187 cd00833 PKS polyketide synthas 64.2 35 0.00076 33.1 8.5 84 75-159 278-370 (421)
188 PRK09352 3-oxoacyl-(acyl carri 64.0 21 0.00046 33.4 6.6 44 78-127 221-264 (319)
189 PTZ00050 3-oxoacyl-acyl carrie 63.8 36 0.00078 33.6 8.5 99 52-155 262-369 (421)
190 PRK05952 3-oxoacyl-(acyl carri 63.6 23 0.00051 34.6 7.0 98 51-155 232-335 (381)
191 PRK09116 3-oxoacyl-(acyl carri 63.2 5.6 0.00012 39.2 2.6 30 291-320 229-258 (405)
192 PRK07850 acetyl-CoA acetyltran 63.0 45 0.00097 32.7 8.9 94 49-158 266-367 (387)
193 PRK06333 3-oxoacyl-(acyl carri 61.1 31 0.00068 33.9 7.5 79 76-155 288-371 (424)
194 PF00814 Peptidase_M22: Glycop 61.0 6.8 0.00015 36.4 2.6 56 75-134 30-88 (268)
195 cd00828 elong_cond_enzymes "el 60.8 37 0.0008 33.0 7.9 80 75-155 273-358 (407)
196 PRK07515 3-oxoacyl-(acyl carri 60.7 33 0.00071 33.1 7.4 25 77-101 272-296 (372)
197 smart00825 PKS_KS Beta-ketoacy 60.5 44 0.00095 32.6 8.4 82 75-157 278-368 (424)
198 PRK09052 acetyl-CoA acetyltran 60.5 38 0.00083 33.3 7.9 94 51-159 280-380 (399)
199 COG0304 FabB 3-oxoacyl-(acyl-c 59.8 21 0.00046 35.4 6.0 100 51-155 254-360 (412)
200 PRK08722 3-oxoacyl-(acyl carri 59.6 56 0.0012 32.2 9.0 78 76-155 278-363 (414)
201 PLN02787 3-oxoacyl-[acyl-carri 59.3 26 0.00056 36.1 6.7 77 78-155 407-488 (540)
202 PRK07661 acetyl-CoA acetyltran 56.9 49 0.0011 32.5 8.0 95 51-159 272-372 (391)
203 PRK08313 acetyl-CoA acetyltran 56.5 1.1E+02 0.0024 29.8 10.4 50 49-100 230-281 (386)
204 cd00826 nondecarbox_cond_enzym 55.8 13 0.00029 36.4 3.8 42 201-243 130-171 (393)
205 cd00751 thiolase Thiolase are 55.3 45 0.00098 32.5 7.4 89 51-153 268-362 (386)
206 PRK06025 acetyl-CoA acetyltran 55.0 32 0.00069 34.3 6.3 87 50-152 297-391 (417)
207 PRK05790 putative acyltransfer 54.5 35 0.00076 33.3 6.5 97 51-161 274-376 (393)
208 PRK05656 acetyl-CoA acetyltran 51.8 71 0.0015 31.3 8.2 94 51-160 274-375 (393)
209 TIGR00329 gcp_kae1 metallohydr 51.8 18 0.0004 34.2 3.9 55 75-134 49-107 (305)
210 PRK06205 acetyl-CoA acetyltran 51.8 55 0.0012 32.2 7.5 95 51-160 281-385 (404)
211 PRK06445 acetyl-CoA acetyltran 51.8 70 0.0015 31.3 8.2 95 51-161 275-377 (394)
212 PRK08235 acetyl-CoA acetyltran 51.6 46 0.001 32.6 6.9 70 78-153 293-368 (393)
213 PRK06059 lipid-transfer protei 51.1 66 0.0014 31.4 7.9 69 78-152 275-367 (399)
214 PRK08439 3-oxoacyl-(acyl carri 50.5 12 0.00026 36.8 2.6 30 291-320 228-257 (406)
215 TIGR03723 bact_gcp putative gl 49.0 21 0.00045 34.0 3.9 56 74-134 49-108 (314)
216 PRK07103 polyketide beta-ketoa 48.0 93 0.002 30.5 8.4 96 51-155 261-362 (410)
217 PF02803 Thiolase_C: Thiolase, 46.0 57 0.0012 26.7 5.5 74 79-160 25-106 (123)
218 PRK07910 3-oxoacyl-(acyl carri 45.8 42 0.00091 33.2 5.6 77 77-155 287-368 (418)
219 PRK06501 3-oxoacyl-(acyl carri 45.4 74 0.0016 31.5 7.3 79 77-156 290-374 (425)
220 PRK09604 UGMP family protein; 43.6 30 0.00066 33.1 4.1 56 75-134 52-110 (332)
221 PRK14878 UGMP family protein; 43.0 38 0.00083 32.3 4.7 49 76-125 46-98 (323)
222 KOG1394 3-oxoacyl-(acyl-carrie 42.3 18 0.0004 35.2 2.3 25 76-100 301-325 (440)
223 PRK06366 acetyl-CoA acetyltran 42.1 89 0.0019 30.5 7.2 96 49-160 265-369 (388)
224 PRK07967 3-oxoacyl-(acyl carri 42.0 19 0.00041 35.5 2.5 29 292-320 229-257 (406)
225 PLN03170 chalcone synthase; Pr 41.4 82 0.0018 31.1 6.8 70 76-151 281-353 (401)
226 COG0533 QRI7 Metal-dependent p 40.0 52 0.0011 31.9 4.9 55 76-135 52-110 (342)
227 PTZ00340 O-sialoglycoprotein e 39.9 35 0.00076 33.1 3.9 56 75-135 50-109 (345)
228 PLN03169 chalcone synthase fam 39.3 86 0.0019 30.7 6.6 68 78-149 283-353 (391)
229 TIGR03285 methan_mark_14 putat 38.5 48 0.001 32.4 4.4 35 69-103 60-94 (445)
230 PLN02404 6,7-dimethyl-8-ribity 38.5 1.5E+02 0.0033 24.9 7.0 42 47-100 6-47 (141)
231 cd00831 CHS_like Chalcone and 37.9 71 0.0015 30.6 5.7 80 76-164 259-350 (361)
232 PLN02287 3-ketoacyl-CoA thiola 37.2 94 0.002 31.2 6.6 67 78-153 333-408 (452)
233 PRK08947 fadA 3-ketoacyl-CoA t 35.5 1.5E+02 0.0032 29.0 7.6 96 51-160 265-369 (387)
234 TIGR03722 arch_KAE1 universal 34.9 38 0.00082 32.2 3.2 48 76-124 47-98 (322)
235 cd00827 init_cond_enzymes "ini 34.7 1.8E+02 0.004 26.9 7.9 45 75-125 222-266 (324)
236 PRK06633 acetyl-CoA acetyltran 34.4 37 0.00079 33.4 3.1 42 51-100 273-314 (392)
237 TIGR02445 fadA fatty oxidation 33.0 2E+02 0.0043 28.1 8.0 97 50-160 262-367 (385)
238 PRK06504 acetyl-CoA acetyltran 32.9 1.7E+02 0.0036 28.7 7.5 76 76-159 288-371 (390)
239 COG2971 Predicted N-acetylgluc 31.8 4.4E+02 0.0096 25.1 9.7 82 74-166 47-128 (301)
240 PLN02644 acetyl-CoA C-acetyltr 31.8 1.1E+02 0.0023 30.1 5.9 69 79-153 294-368 (394)
241 cd07321 Extradiol_Dioxygenase_ 31.1 47 0.001 24.9 2.5 26 197-222 24-49 (77)
242 PF04422 FrhB_FdhB_N: Coenzyme 31.1 80 0.0017 23.7 3.9 31 134-164 14-44 (82)
243 PRK06954 acetyl-CoA acetyltran 30.9 1.2E+02 0.0025 29.9 6.0 66 78-152 297-371 (397)
244 PF12368 DUF3650: Protein of u 30.0 51 0.0011 19.9 2.0 16 200-215 8-23 (28)
245 PRK07801 acetyl-CoA acetyltran 29.9 1.6E+02 0.0034 28.7 6.7 74 79-160 283-364 (382)
246 PRK09605 bifunctional UGMP fam 29.5 54 0.0012 33.4 3.5 49 76-125 50-102 (535)
247 PLN03172 chalcone synthase fam 29.2 1.5E+02 0.0034 29.0 6.5 69 77-151 278-349 (393)
248 cd07923 Gallate_dioxygenase_C 28.9 53 0.0011 25.7 2.5 30 197-226 26-55 (94)
249 PF05920 Homeobox_KN: Homeobox 28.8 1.1E+02 0.0025 19.7 3.7 26 198-223 15-40 (40)
250 PLN03173 chalcone synthase; Pr 28.6 1.6E+02 0.0034 29.0 6.4 71 76-152 277-350 (391)
251 TIGR02845 spore_V_AD stage V s 28.5 3.7E+02 0.0079 26.0 8.6 91 79-172 205-311 (327)
252 PRK08131 acetyl-CoA acetyltran 27.9 49 0.0011 32.6 2.8 89 51-153 279-375 (401)
253 PRK08963 fadI 3-ketoacyl-CoA t 26.6 3.4E+02 0.0075 26.9 8.5 24 78-101 311-334 (428)
254 PLN02854 3-ketoacyl-CoA syntha 26.5 2.8E+02 0.0061 28.5 7.9 81 78-164 387-480 (521)
255 KOG2708 Predicted metalloprote 26.4 1.1E+02 0.0023 28.3 4.3 26 76-101 51-76 (336)
256 PRK07851 acetyl-CoA acetyltran 26.3 15 0.00033 36.2 -1.2 30 198-227 186-215 (406)
257 cd07921 PCA_45_Doxase_A_like S 25.3 66 0.0014 25.8 2.5 28 197-224 34-61 (106)
258 PF09887 DUF2114: Uncharacteri 25.2 1.2E+02 0.0027 29.8 4.8 35 69-103 62-97 (448)
259 PRK12404 stage V sporulation p 25.2 4.6E+02 0.01 25.4 8.6 91 79-172 209-316 (334)
260 PF14574 DUF4445: Domain of un 24.7 57 0.0012 32.5 2.5 75 71-153 299-377 (412)
261 PRK13410 molecular chaperone D 24.5 1.9E+02 0.0041 30.6 6.5 45 77-124 310-354 (668)
262 TIGR02446 FadI fatty oxidation 24.4 2.9E+02 0.0064 27.5 7.6 23 79-101 314-336 (430)
263 TIGR02813 omega_3_PfaA polyket 24.2 2.9E+02 0.0063 34.3 8.5 102 51-156 293-403 (2582)
264 PRK08304 stage V sporulation p 23.9 5E+02 0.011 25.2 8.7 91 79-172 211-318 (337)
265 PTZ00186 heat shock 70 kDa pre 23.3 2.1E+02 0.0046 30.2 6.6 43 79-124 337-379 (657)
266 PRK06365 acetyl-CoA acetyltran 22.4 2.6E+02 0.0057 27.7 6.8 25 77-101 294-320 (430)
267 KOG0102 Molecular chaperones m 22.1 83 0.0018 32.5 3.1 76 79-162 337-412 (640)
268 PRK06065 acetyl-CoA acetyltran 21.7 1.4E+02 0.003 29.3 4.6 52 48-101 236-289 (392)
269 PLN03184 chloroplast Hsp70; Pr 21.5 2E+02 0.0043 30.5 6.0 52 79-136 349-400 (673)
270 cd07925 LigA_like_1 The A subu 21.0 1.3E+02 0.0028 24.1 3.4 30 196-225 33-62 (106)
271 PRK13379 protocatechuate 4,5-d 20.2 1.4E+02 0.0031 24.3 3.6 30 197-226 46-75 (119)
No 1
>PLN02287 3-ketoacyl-CoA thiolase
Probab=100.00 E-value=4.6e-62 Score=481.18 Aligned_cols=317 Identities=82% Similarity=1.207 Sum_probs=270.6
Q ss_pred ChHHhHHHHHHHhccCCCCCCCCCCccccccccccccccccCCCCCCCCceEEEecccccccccCCCCCCCCCHHHHHHH
Q 020887 1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP 80 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~ 80 (320)
|||++.|||.||.||.||||..| .+|+|.|.+|..+.||+-..+.++|||||+++|||+++++|.+.+.++.+|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~e 77 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSSEPS---SLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAP 77 (452)
T ss_pred CchHHHHHHHHHhhccCCCCCcc---ccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHHH
Confidence 89999999999999999998776 478999999999999999999999999999999999843566678999999999
Q ss_pred HHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 81 A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
|+++||+|+||+++|||.+++|+..+...+..+.++.++..+|++...|+++|+++|+||..++..|+++|++|.+|+||
T Consensus 78 A~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvL 157 (452)
T PLN02287 78 VLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI 157 (452)
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEE
Confidence 99999999999999999999998866544344567888899999756899999999999999999999999999999999
Q ss_pred EEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeee
Q 020887 161 AAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240 (320)
Q Consensus 161 v~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv 240 (320)
|+|+|+|+..|+.+.....+.+..+.........|++++++||++||+|||++|+||++||+||++||++|+|+++|+||
T Consensus 158 v~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv 237 (452)
T PLN02287 158 GAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV 237 (452)
T ss_pred EEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeee
Confidence 99999999887533222222111111001112459999999999999999999999999999999999999999999999
Q ss_pred eecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 241 ~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+++..++..+..++++++.||++|.++++|++.++||+|+|+||||++|||+++|||+|+||+|+|+|++++.+|+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~ 317 (452)
T PLN02287 238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFR 317 (452)
T ss_pred eccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEE
Confidence 87532111011112578999999999999999999999988899999999999999999999999999999999988863
No 2
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=100.00 E-value=9.3e-54 Score=396.21 Aligned_cols=252 Identities=46% Similarity=0.673 Sum_probs=205.9
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
|++||||++.||||++ ++|.+.+.++.+|+.++++++|++++|++++||.+++|++.+... +.++++.++..+|||..
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 6899999999999997 689999999999999999999999999999999999999988765 78899999999999888
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc-----CccC------hhhhhhhccccCCCchH
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVN------PKVEIFTQARDCLLPMG 196 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~g 196 (320)
+|+++|+++|+||++||.+|++.|++|.+|++|++|+|+||+.|+... ..+. ..+.+..........|+
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999988542 1111 11211111223356899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCC
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~ 276 (320)
++||+++++||||||++|+||++||++|++++++|+|++||+||+++.++ +++.+++.||++|+++|+|+|.++|
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~-----g~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK-----GEEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT-----SEEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc-----cceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999987432 2236899999999999999999999
Q ss_pred CcccCC-CcccCCCCCCCCCcceEEEEcCHH
Q 020887 277 PAFKKD-GTTTAGNASQVSDGAGAVLLMKRS 306 (320)
Q Consensus 277 ~i~~~~-gplt~~d~s~~sDGAaAvvLaSee 306 (320)
|+|.|+ |.+|++|+|+++|||+++||+|||
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999986 999999999999999999999987
No 3
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=9.1e-52 Score=401.84 Aligned_cols=263 Identities=35% Similarity=0.478 Sum_probs=228.0
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||+|++||||+| +.|.+.++++.+|+.++++++|+|+||++++||.+++|++.+...++.++++.++..+|++..+
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 2 GNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 579999999999998 5677889999999999999999999999999999999998754433467889999999997679
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC--cc-ChhhhhhhccccCCCchHHHHHHHHHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG--QV-NPKVEIFTQARDCLLPMGITSENVAQR 205 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~--~~-~~~~~~~~~~~~~~~~~g~~A~~~~~~ 205 (320)
|+++|+++|+||+.|+..|++.|++|.+|++|++|+|+||+.|+.... .+ .....+ +. . ....|+..|++||++
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~-~~-~-~~~~m~~~ae~~~~~ 157 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDS-WD-I-DMPNQFEAAERIAKR 157 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccc-cc-c-CcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998852111 11 011000 11 1 123577899999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecc---c-CCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC
Q 020887 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI---V-DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (320)
Q Consensus 206 yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~---~-~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~ 281 (320)
||+||||+|+||++||+||++++++|+|++||+||+++. + ||+++. .+++.||.+| ++|+|+|.+++|+| +
T Consensus 158 ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~---~~~~~D~~~r-~~t~e~l~~l~p~~-~ 232 (387)
T PRK07850 158 RGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGET---RLVTRDQGLR-DTTMEGLAGLKPVL-E 232 (387)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCc---eEeecCCCcc-cCCHHHhccCCCCC-C
Confidence 999999999999999999999999999999999998864 2 888875 3689999999 99999999999998 4
Q ss_pred CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 282 ~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++.+|++|||+++|||+|+||+|+|+|++++++|.+||+
T Consensus 233 ~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~ 271 (387)
T PRK07850 233 GGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIV 271 (387)
T ss_pred CCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEE
Confidence 556799999999999999999999999999999999884
No 4
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-51 Score=401.34 Aligned_cols=265 Identities=32% Similarity=0.441 Sum_probs=225.4
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||++||||+| +.|.++++++.+|+.++++++|+|+||++++||.+++|+..+...++.++++......||+..+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v 80 (390)
T PRK06504 2 AEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV 80 (390)
T ss_pred CceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 579999999999998 5788889999999999999999999999999999999988754333457888888888997789
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC------ccCh-hhhhhhcccc-CCCchHHHHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QVNP-KVEIFTQARD-CLLPMGITSE 200 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~------~~~~-~~~~~~~~~~-~~~~~g~~A~ 200 (320)
|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+.... .+.. .+..+...+. ....|+..++
T Consensus 81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae 160 (390)
T PRK06504 81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAE 160 (390)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999988752111 0101 1000111111 1236888899
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCccc
Q 020887 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (320)
Q Consensus 201 ~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~ 280 (320)
+||++||+||||+|+||++||+||.+||++|+|++||+||+++.++ +++..++.||++|+++|+|+|+++||++
T Consensus 161 ~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~-----~~~~~~~~De~~r~~~t~e~l~~~~~~~- 234 (390)
T PRK06504 161 MMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRAD-----GSGEMHTVDEGIRFDATLEGIAGVKLIA- 234 (390)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCC-----CCceEEccCCCCCCCCCHHHHhcCCCCC-
Confidence 9999999999999999999999999999999999999999875321 1235688999999999999999999996
Q ss_pred CCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 281 ~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++||||++|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 235 ~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~ 274 (390)
T PRK06504 235 EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIH 274 (390)
T ss_pred CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEE
Confidence 3579999999999999999999999999999999998874
No 5
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1e-51 Score=402.28 Aligned_cols=265 Identities=36% Similarity=0.514 Sum_probs=227.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||++||||+| ++|.+.+.++.+|+.+|+++||+|+||++++||.+++|+..+.+. +.++++.++..+|++...
T Consensus 2 ~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 79 (393)
T PRK08235 2 SKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWEV 79 (393)
T ss_pred CcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCCc
Confidence 579999999999998 567888999999999999999999999999999999998876432 567888889999997578
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc-C----cc-Chhhhh-h-hcc-c--cCCCchHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-G----QV-NPKVEI-F-TQA-R--DCLLPMGI 197 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~-~----~~-~~~~~~-~-~~~-~--~~~~~~g~ 197 (320)
|+++|+++|+||..+|..|+++|++|.+|++|++|+|+||+.|+... . .. ++.+.+ + ... . .....|++
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (393)
T PRK08235 80 QTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGV 159 (393)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHH
Confidence 99999999999999999999999999999999999999998875211 0 11 111111 0 000 1 12246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~ 277 (320)
+|++||++||+||||+|+|+++||+||++|+++|+|++||+||+++.++ ++.++++.|+++|+++|+|+|+++||
T Consensus 160 ~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 160 YGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRK-----GDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCC-----CCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999886321 12356889999999999999999999
Q ss_pred cccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 278 i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+++|+||||++|||+++|||+|+||+|+|+|++++.+|++||+
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~ 277 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATIL 277 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 9987788999999999999999999999999999999999884
No 6
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.9e-51 Score=399.69 Aligned_cols=274 Identities=42% Similarity=0.571 Sum_probs=229.7
Q ss_pred CCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCC
Q 020887 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (320)
Q Consensus 46 ~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl 124 (320)
..|++|+|||++||||+|.+.|.+.+.+..+|+.+|+++||+|+ ||++++||.+++|+..+...++.+.++.+...+|+
T Consensus 3 ~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl 82 (399)
T PRK09052 3 KQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL 82 (399)
T ss_pred CCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC
Confidence 44578999999999999733577889999999999999999997 99999999999998776544456778877888899
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC-ccCh-hhhhhhccccCCCchHHHHHHH
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNP-KVEIFTQARDCLLPMGITSENV 202 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~-~~~~-~~~~~~~~~~~~~~~g~~A~~~ 202 (320)
+..+|+++|+++|+||+.|+..|+++|++|++|+||++|+|+||+.|+.... .... .+..... ......|+++|++|
T Consensus 83 ~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~ 161 (399)
T PRK09052 83 PNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDEN-VGIAYGMGLTAEKV 161 (399)
T ss_pred CCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCc-ccccchHHHHHHHH
Confidence 6458999999999999999999999999999999999999999988842110 1111 1111100 11124799999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCC--CCc--cceEEEeccCCCCCCCCHHHHhcCCCc
Q 020887 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPK--TGV--EKRVTISVDDGIRPNTTIADLAKLKPA 278 (320)
Q Consensus 203 ~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~--a~~--~~~~~~~~De~~r~~~t~e~l~~~~~i 278 (320)
|++||+||||+|+|+++||+||++||++|+|++||+|+++..+.|. .+. .+..+++.||++|+++|+|.|.++||+
T Consensus 162 ~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~ 241 (399)
T PRK09052 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPV 241 (399)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCc
Confidence 9999999999999999999999999999999999999987642111 000 012568999999999999999999999
Q ss_pred ccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 279 ~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|+|++|||++|||+++|||+|+||+|+|.|++++++|++||+
T Consensus 242 f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~ 283 (399)
T PRK09052 242 FANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFV 283 (399)
T ss_pred cCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEE
Confidence 988899999999999999999999999999999999999985
No 7
>PRK09051 beta-ketothiolase; Provisional
Probab=100.00 E-value=3.1e-51 Score=398.99 Aligned_cols=264 Identities=42% Similarity=0.631 Sum_probs=226.2
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||++||||++ ++|.+.+.+..+|+.+|+++||+|+||++++||.+++|+..+...+..+.++.++..+|++...
T Consensus 3 ~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~ 81 (394)
T PRK09051 3 REVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET 81 (394)
T ss_pred CcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence 579999999999998 5688889999999999999999999999999999999988764432356788888889996568
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc-cc----Ccc-Ch-hhhh----hhccccCCCchHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-VV----GQV-NP-KVEI----FTQARDCLLPMGI 197 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~-~~----~~~-~~-~~~~----~~~~~~~~~~~g~ 197 (320)
|+++|+++|+||+.++..|+++|++|.+|++||+|+|+||+.|+. .. ... +. .+.. +..++ ....|++
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 160 (394)
T PRK09051 82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPF-GTIHMGV 160 (394)
T ss_pred ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccc-cCCCHHH
Confidence 999999999999999999999999999999999999999987751 11 011 11 1110 11111 1236999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~ 277 (320)
+|++||++||+||||+|+||++||+||++|+++|+|++||+||+++.+ ++.++++.|+++|+++|+|+|+++||
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~------~~~~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR------KGEVVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC------CCCeEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987632 12256889999999999999999999
Q ss_pred cccCC-CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 278 AFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 278 i~~~~-gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+++++ ||||++||||++|||+|+||+|++.|++++++|++||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~ 278 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLV 278 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEE
Confidence 99765 89999999999999999999999999999999999984
No 8
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=5.3e-51 Score=397.47 Aligned_cols=262 Identities=35% Similarity=0.503 Sum_probs=226.8
Q ss_pred CceEEEeccccccccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKA-KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~-~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|+||++.||||+|. +.|.+++++..+|+.+|++++|+++||++++||.+++|+..+...++.++++..+..+|+|..
T Consensus 2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~ 81 (402)
T PRK08242 2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET 81 (402)
T ss_pred CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence 5799999999999983 468999999999999999999999999999999999999887543346788988899999767
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccChhhhhhhcc-ccCCCchHHHHHHHHHHh
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQA-RDCLLPMGITSENVAQRF 206 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~A~~~~~~y 206 (320)
.|+++|+++|+||+.||..|+++|++|.+|++|++|+|+||+.|+..... ..+.+.... ......||++|++|+++|
T Consensus 82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~--~~~~~~~~~~~~~~~~mg~~Ae~~a~~~ 159 (402)
T PRK08242 82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGG--AWAMDPSTNFPTYFVPQGISADLIATKY 159 (402)
T ss_pred CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCc--ccccCcccccccccCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999988632111 001010000 111246899999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC----C
Q 020887 207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK----D 282 (320)
Q Consensus 207 Gitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~----~ 282 (320)
|+|||++|+||++||+||.+++++|+|++||+||+.+ ++..+++.||++|+++|+|+|.++||+|+| +
T Consensus 160 gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~--------~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~ 231 (402)
T PRK08242 160 GFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQ--------NGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMG 231 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecC--------CCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccC
Confidence 9999999999999999999999999999999999732 112468999999999999999999999976 3
Q ss_pred C-----------------cccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 283 G-----------------TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 283 g-----------------plt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
| ++|++|||+++|||+|+||+|+|+|++++++|.+||+
T Consensus 232 g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~ 286 (402)
T PRK08242 232 GFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIV 286 (402)
T ss_pred cccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEE
Confidence 4 6999999999999999999999999999999999985
No 9
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.2e-51 Score=398.39 Aligned_cols=255 Identities=38% Similarity=0.552 Sum_probs=218.8
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||+++|||+| +.|.+.+.++.+|+.+|+++||+|+||++++||.+++|+..+.+. +.++++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~~ 79 (388)
T PRK06366 2 KDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFGV 79 (388)
T ss_pred CcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCCC
Confidence 579999999999998 457777899999999999999999999999999999998765443 456788899999997568
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--Cc----c----Chhhhhhh--cc-ccC--CC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQ----V----NPKVEIFT--QA-RDC--LL 193 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~~----~----~~~~~~~~--~~-~~~--~~ 193 (320)
|.++++++|+||+.++..|+++|++|++|+||++|+|+|++.|+... .. . ...+.+.. .+ ..+ ..
T Consensus 80 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (388)
T PRK06366 80 TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFE 159 (388)
T ss_pred cceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCc
Confidence 99999999999999999999999999999999999999997664211 00 0 00111111 00 011 24
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHh
Q 020887 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (320)
Q Consensus 194 ~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~ 273 (320)
.|++.|++||++||+||||+|+|+++||+||++||++|+|++||+|++. ++.||++| ++|+|+|+
T Consensus 160 ~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~~ 224 (388)
T PRK06366 160 HMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLA 224 (388)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHHh
Confidence 5899999999999999999999999999999999999999999999741 56799999 79999999
Q ss_pred cCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 274 ~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++||+++|+||||++|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~ 271 (388)
T PRK06366 225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARIT 271 (388)
T ss_pred hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEE
Confidence 99999987788999999999999999999999999999999999985
No 10
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=100.00 E-value=7.7e-51 Score=396.47 Aligned_cols=265 Identities=35% Similarity=0.466 Sum_probs=227.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|+|+|++||||+| ++|.+.+.++.+|+.++++++|++ +||++++||.+++|++.+...++.++++.++..+|||.+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 579999999999998 678889999999999999999996 699999999999999876554457899999999999877
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--C-cc--Chh-hhhh-------h--ccccCC
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-QV--NPK-VEIF-------T--QARDCL 192 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~-~~--~~~-~~~~-------~--~~~~~~ 192 (320)
+|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+... . .+ ... +... . ......
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGV 160 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999999885211 1 11 101 1100 0 011123
Q ss_pred CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHH
Q 020887 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (320)
Q Consensus 193 ~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l 272 (320)
..|+++||+++++||||||++|+|+++||+++..++..|+|++||+||+++.++ ++.++++.||++|+ +|+|+|
T Consensus 161 ~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~-----~~~~~~~~De~~r~-~t~e~l 234 (400)
T PRK13359 161 DSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKK-----GDPLVVSRDEHPRE-TTLEAL 234 (400)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCC-----CCceeecCCCCCCC-CCHHHH
Confidence 479999999999999999999999999999888888888999999999875311 11257899999997 999999
Q ss_pred hcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 273 ~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
.++||+|+|+|+||++|||+++|||+|+||+|+++|++++++|.+||+
T Consensus 235 ~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~ 282 (400)
T PRK13359 235 AKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVL 282 (400)
T ss_pred hcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEE
Confidence 999999988889999999999999999999999999999999999985
No 11
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=5.4e-51 Score=401.26 Aligned_cols=263 Identities=35% Similarity=0.522 Sum_probs=226.8
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
.++|||||++||||++ +.|.+++.++.+|+.+++++||+|+||++++||.+++|++.+... +.++++.+++.+|++..
T Consensus 4 ~~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~ 81 (428)
T PRK08963 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 81 (428)
T ss_pred CCeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCC
Confidence 4579999999999998 468889999999999999999999999999999999998765443 56789989999999756
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-------------cChh--------hhh-h
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK--------VEI-F 185 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-------------~~~~--------~~~-~ 185 (320)
+|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|+..... .... +.. +
T Consensus 82 ~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (428)
T PRK08963 82 TDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLL 161 (428)
T ss_pred CcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcc
Confidence 99999999999999999999999999999999999999999887521110 0000 000 0
Q ss_pred h-cc----ccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEecc
Q 020887 186 T-QA----RDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (320)
Q Consensus 186 ~-~~----~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~D 260 (320)
. .+ +.+...|+++|++||++||+||||+|+||++||+||.+|+++|+|++||+||+++ ||++ +++.|
T Consensus 162 ~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~---p~a~-----~~~~D 233 (428)
T PRK08963 162 PVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVP---PYKQ-----PLEED 233 (428)
T ss_pred ccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEec---CCce-----eeCCC
Confidence 0 00 0112369999999999999999999999999999999999999999999999873 5552 58999
Q ss_pred CCCCCCCCHHHHhcCCCcccC-CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 261 DGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 261 e~~r~~~t~e~l~~~~~i~~~-~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|++|+++|+|+|+++||+++| +||||++|||+++|||+|+||+|+++|++++++|++||+
T Consensus 234 ~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~ 294 (428)
T PRK08963 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLR 294 (428)
T ss_pred CCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEE
Confidence 999999999999999999974 578999999999999999999999999999999998874
No 12
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=100.00 E-value=5.5e-51 Score=400.85 Aligned_cols=264 Identities=33% Similarity=0.486 Sum_probs=228.1
Q ss_pred CCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC
Q 020887 47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (320)
Q Consensus 47 ~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 126 (320)
..++|||||++||||+| ++|.+.+++..+|+.+++++||+|+||++++||.+++|++.+... +.++++.+++.+|++.
T Consensus 5 ~~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~ 82 (430)
T TIGR02446 5 QGERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNV 82 (430)
T ss_pred cCCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCC
Confidence 45689999999999998 578888999999999999999999999999999999999876443 4679999999999976
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-------------cChh--------hhh-
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK--------VEI- 184 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-------------~~~~--------~~~- 184 (320)
.+|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|+..... .... +.+
T Consensus 83 ~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (430)
T TIGR02446 83 HTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDL 162 (430)
T ss_pred CCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhh
Confidence 899999999999999999999999999999999999999999877532110 0000 000
Q ss_pred hhcc-----ccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEec
Q 020887 185 FTQA-----RDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISV 259 (320)
Q Consensus 185 ~~~~-----~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~ 259 (320)
+..+ +.+...|++.|++||++||+|||++|+||++||+||.+++++|+|++||+|++. ||+++ .++.
T Consensus 163 ~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~---np~a~-----~~~~ 234 (430)
T TIGR02446 163 MPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFP---PPYKQ-----WIAE 234 (430)
T ss_pred cccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeee---cCCce-----Eecc
Confidence 0000 001235999999999999999999999999999999999999999999999975 57653 4899
Q ss_pred cCCCCCCCCHHHHhcCCCcccC-CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 260 DDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 260 De~~r~~~t~e~l~~~~~i~~~-~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||++|+++|+|+|+++||+|+| .||||++|||+++|||+|+||+|+++|++++++|+++|+
T Consensus 235 D~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~ 296 (430)
T TIGR02446 235 DNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIR 296 (430)
T ss_pred cCCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEE
Confidence 9999999999999999999986 489999999999999999999999999999999998874
No 13
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=100.00 E-value=1e-50 Score=395.87 Aligned_cols=266 Identities=38% Similarity=0.521 Sum_probs=228.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~-dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|||+|++||||+| +.|.+.+.++.+|+.++++++|+ ++||++++||.+++|++.+.+..+.++++.++..+|++.+
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 80 (401)
T PRK09050 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS 80 (401)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 579999999999998 56788899999999999999999 5899999999999999876543346899999999999877
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--C-cc--Chh-hhhh-------h--ccccCC
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-QV--NPK-VEIF-------T--QARDCL 192 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~-~~--~~~-~~~~-------~--~~~~~~ 192 (320)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+... . .+ ... +..+ . ......
T Consensus 81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T PRK09050 81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGV 160 (401)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999998885210 0 00 000 1000 0 011123
Q ss_pred CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHH
Q 020887 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (320)
Q Consensus 193 ~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l 272 (320)
..|+++|++|+++||+|||++|+||..||+|+.++.++|+|++||+||+++.++ ++.++++.|+++|+++|+|+|
T Consensus 161 ~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~-----~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 161 DSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKK-----GDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCC-----CCceeeCCCCCCCCCCCHHHH
Confidence 478999999999999999999999999999999999999999999999986421 123578899999999999999
Q ss_pred hcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 273 ~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+++||+|+|+||||++|||+++|||+|+||+|+++|++++++|++||+
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~ 283 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARIL 283 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEE
Confidence 999999987789999999999999999999999999999999999985
No 14
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=5.8e-51 Score=396.19 Aligned_cols=263 Identities=35% Similarity=0.528 Sum_probs=228.4
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||+.||||+| ++|.+.++++.+|+.++++++|+|+||++++||.+++|+..+.+. +.++++.++..+|++..+
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 479999999999998 679999999999999999999999999999999999999886653 678889999999997679
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc-c-cC--cc-Ch-h-----hhhhhccccCCCchHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-V-VG--QV-NP-K-----VEIFTQARDCLLPMGI 197 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~-~-~~--~~-~~-~-----~~~~~~~~~~~~~~g~ 197 (320)
|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||..|+. . .. .. .. . +..+... .+...|++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~ 159 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDV-FSGVFMGI 159 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccc-cCcchHHH
Confidence 999999999999999999999999999999999999999976631 0 00 01 10 0 1111111 11236899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~ 277 (320)
.|++||++||+|||++|+||++||+||.+||++|+|++||+|++++.++ +..+++.||.+|+.+++|.+.+++|
T Consensus 160 ~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~------~~~~~~~d~~~rp~~~~e~l~~l~p 233 (392)
T PRK06633 160 TAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK------TTSLFDHDETVRPDTSLEILSKLRP 233 (392)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC------CceeeccCCCCCCCCCHHHHccCCC
Confidence 9999999999999999999999999999999999999999999875311 1257899999999999999999999
Q ss_pred cccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 278 i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+|+|+||||++|||+++|||+++||+|+|+|++++.+|++||+
T Consensus 234 ~~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~ 276 (392)
T PRK06633 234 AFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIV 276 (392)
T ss_pred ccCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEE
Confidence 9987899999999999999999999999999999999999884
No 15
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=100.00 E-value=9.8e-51 Score=394.72 Aligned_cols=265 Identities=38% Similarity=0.544 Sum_probs=228.2
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|||+|+++|||+|.+.|.+.+.+..+|+.++++++|++ +||++++||.+++|+..+...++.++++.++..+|++..
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 6799999999999984468888999999999999999995 799999999999998765443346788889999999766
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhC
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yG 207 (320)
.|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|......+++.+.+.. ......|+++|++||++||
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~yg 159 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNV--AKAAGMMGLTAEMLGKMHG 159 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhc--cccchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999877532222222222211 1123479999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC-CCccc
Q 020887 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTT 286 (320)
Q Consensus 208 itre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~-~gplt 286 (320)
+|||++|+||++||+||.+|+.+|+|++||+||+++.++ +.+++++.|+++|+++|+|+|+++||+++| ++.||
T Consensus 160 isre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt 234 (387)
T PRK08947 160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDAD-----GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCC-----CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEE
Confidence 999999999999999999999999999999999987421 123578899999999999999999999974 45599
Q ss_pred CCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 287 ~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++|||+++|||+|+||+|++++++++++|.+||+
T Consensus 235 ~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~ 268 (387)
T PRK08947 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIR 268 (387)
T ss_pred ccccCCcCCceEEEEEccHHHHHHCCCCccEEEE
Confidence 9999999999999999999999999999998884
No 16
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.9e-50 Score=393.04 Aligned_cols=269 Identities=42% Similarity=0.593 Sum_probs=227.1
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||+++|||+|...|.+++++..+|+.+|+++||+|+|+.+++||.+++|+..+...+++++++.++..+|++..+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 47999999999999844677889999999999999999999988899999999987765443567888899999996459
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC-ccChhhhhhhccccCCCchHHHHHHHHHHhC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yG 207 (320)
|+++|+++|+||+.|+..|++.|++|.+|++||+|+|+|++.|+.... .....+.+.. + .....|+++|++||++||
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~-~-~~~~~m~~~a~~~~~~~g 159 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAA-P-EYYMGMGHTAEQVAVKYG 159 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccc-c-chhhhHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999988752110 0011111100 0 112347999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeeccc----CCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 020887 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV----DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (320)
Q Consensus 208 itre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~----~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~g 283 (320)
+|||++|+||++||+||.+||++|+|++||+||+++.+ ++++. ....+++.||++|+++|+|.+.+++|+|.++|
T Consensus 160 ~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~-~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g 238 (391)
T PRK07661 160 ISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQ-EETITFSQDEGVRADTTLEILGKLRPAFNVKG 238 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCccc-ccceeEecCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999999999988631 11111 11257899999999999999999999987779
Q ss_pred cccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 284 plt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||++|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 239 ~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~ 275 (391)
T PRK07661 239 SVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFR 275 (391)
T ss_pred CEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 9999999999999999999999999999999999984
No 17
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=100.00 E-value=1.1e-50 Score=394.07 Aligned_cols=264 Identities=38% Similarity=0.515 Sum_probs=228.0
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
+|||||++||||+|.++|.+.+.++.+|+.++++++|++ +||++++||.+++|+..+...++.++++.++...|+|..+
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 489999999999985468888999999999999999996 6999999999999988644433567899888899998779
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhCC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGV 208 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yGi 208 (320)
|+++|+++|+||+.||..|+++|++|.+|++|++|+|+||+.|+.......+.+.+.. ......|+++|++||++||+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~ygi 158 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHV--AKAAGMMGLTAEMLGKMHGI 158 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhh--ccccchHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999887632222222222211 11124799999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC-CCcccC
Q 020887 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTA 287 (320)
Q Consensus 209 tre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~-~gplt~ 287 (320)
|||++|+||++||+||.+|+++|+|++||+||+++.++ +++++++.|+++|+++|+|+|+++||+++| +|.||+
T Consensus 159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD-----GFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC-----CCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 99999999999999999999999999999999987432 123568899999999999999999999975 566999
Q ss_pred CCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 288 ~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+|||+++|||+|+||+|++++++++++|.++|+
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~ 266 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIR 266 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEE
Confidence 999999999999999999999999999999884
No 18
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.8e-50 Score=393.75 Aligned_cols=265 Identities=36% Similarity=0.499 Sum_probs=225.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||++||||+| +.|.+++.+..+|+.+|+++||+|+||++++||.+++|+..+... ++++++.++..+|++...
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~~ 79 (404)
T PRK06205 2 RDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVTV 79 (404)
T ss_pred CceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCC
Confidence 579999999999998 578888999999999999999999999999999999998876654 567788899999996568
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc-----ccCcc-Ch-hhhhh-----hc--c-ccCCC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQV-NP-KVEIF-----TQ--A-RDCLL 193 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~-----~~~~~-~~-~~~~~-----~~--~-~~~~~ 193 (320)
|+++|+++|+||+.++..|+++|++|.+|+|||+|+|+|++.+.. ++... ++ .+..+ .. . +....
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (404)
T PRK06205 80 PGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPG 159 (404)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCC
Confidence 999999999999999999999999999999999999999977631 11111 11 11111 00 0 11123
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHh
Q 020887 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (320)
Q Consensus 194 ~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~ 273 (320)
.|+.+|++||++||+||||+|+||++||+||.+++++|+|++||+||+++.++ +++++++.|+++|+++|+|+|+
T Consensus 160 ~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 160 GMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRK-----GDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCC-----CCceEeccCCCCCCCCCHHHHh
Confidence 46667999999999999999999999999999999999999999999986421 2235688999999999999999
Q ss_pred cCCCcc---cCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 274 KLKPAF---KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 274 ~~~~i~---~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++||+| +|+||||++|||+++|||+|+||+|+|+|++++++|+++|+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~ 284 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLV 284 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEE
Confidence 999999 46689999999999999999999999999999999998874
No 19
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.2e-50 Score=390.57 Aligned_cols=264 Identities=33% Similarity=0.425 Sum_probs=230.6
Q ss_pred CceEEEeccccccc--ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC
Q 020887 49 DDVVIVAAYRTAIC--KAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~--r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 126 (320)
++||||++.||||| |.++|.++++++.+|+..+++++|+++||++++||.|++|++.+.+.++.+++|.+++..|||.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 47999999999998 7347999999999999999999999999999999999999998766546799999999999999
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--Cc--cChhhhhh----hccccCCCchHHH
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQ--VNPKVEIF----TQARDCLLPMGIT 198 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~~--~~~~~~~~----~~~~~~~~~~g~~ 198 (320)
.+|+++|++.|+||++||..|++.|++|++|++|++|+|+||+.|+... .. ....+.+. ....+....||.+
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ 161 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVC 161 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999996211 01 01111111 0011123579999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCc
Q 020887 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (320)
Q Consensus 199 A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i 278 (320)
||+++++||||||++|+||++||++|++++++|+|++||+||+.+ . +..+++.||++|+++|+|.|.++||+
T Consensus 162 ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~----~----~~~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 162 GDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRD----D----GSVALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcC----C----CCEEecCCCCCCCCCCHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999821 1 12568999999999999999999999
Q ss_pred cc--------CCCc------------------ccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 279 FK--------KDGT------------------TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 279 ~~--------~~gp------------------lt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|+ ++|. +|++|||+++|||+|+||+|+++|++++++|.+||+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~ 301 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIV 301 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEE
Confidence 96 3677 999999999999999999999999999999999985
No 20
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=388.38 Aligned_cols=266 Identities=33% Similarity=0.468 Sum_probs=226.3
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||++||||+| +.|.+++.++.+|+.+++++||+|+||++++||.+++|+..+...++.++++.++..+|+|..+
T Consensus 2 ~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 2 LDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 579999999999998 4677889999999999999999999999999999999998765443567888899999997679
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc---Ccc--C-hhhhhhh-----cc-c---cCCC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV---GQV--N-PKVEIFT-----QA-R---DCLL 193 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~---~~~--~-~~~~~~~-----~~-~---~~~~ 193 (320)
|+++|+++|+||+.|+..|+++|++|.+|++|++|+|+||+.|+... ... . ..+..+. .+ . ....
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND 160 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence 99999999999999999999999999999999999999998875210 000 1 1121110 01 0 1234
Q ss_pred chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHh
Q 020887 194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273 (320)
Q Consensus 194 ~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~ 273 (320)
.|+++|++||++||+||||+|+||++||+|+.++.+.++|+++|+|++++.. .. .+...++.||++|+++|+|.|.
T Consensus 161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~-~~---~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG-RK---LPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc-cC---CCceEEecCCCCCCCCCHHHHh
Confidence 6889999999999999999999999999999999999999999999987531 00 0013588999999999999999
Q ss_pred cCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 274 ~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++||+| +++|||++|||+++|||+|+||+|+++|++++++|++||+
T Consensus 237 ~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~ 282 (401)
T PRK08131 237 KLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARIL 282 (401)
T ss_pred cCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEE
Confidence 999999 5689999999999999999999999999999999999984
No 21
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=100.00 E-value=9.2e-50 Score=388.91 Aligned_cols=266 Identities=39% Similarity=0.523 Sum_probs=226.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~-dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|||+|++||||+| +.|.++++++.+|+.++++++|+ ++||++++||.+++|++.+.+..+.++++.++..+|++..
T Consensus 1 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 79 (400)
T TIGR02430 1 REAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVS 79 (400)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 369999999999998 56778899999999999999999 5799999999999999875443346899999999999767
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--C-cc--C-hhhhhh-------hc--cccCC
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-QV--N-PKVEIF-------TQ--ARDCL 192 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~-~~--~-~~~~~~-------~~--~~~~~ 192 (320)
+|+++|+++|+||+.||..|+++|++|++|++|++|+|+||+.|+... . .+ . ..+..+ .. .....
T Consensus 80 ~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (400)
T TIGR02430 80 VPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGV 159 (400)
T ss_pred CceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccccccc
Confidence 999999999999999999999999999999999999999998874110 0 00 0 001000 00 11113
Q ss_pred CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHH
Q 020887 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (320)
Q Consensus 193 ~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l 272 (320)
..|+++|++|+++||+|||++|+||++||++|.+++++|+|++||+||.++.+ .+ +..+++.|+++|+++|+|++
T Consensus 160 ~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~---~~--~~~~~n~da~~r~~~t~e~l 234 (400)
T TIGR02430 160 DSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQK---KG--EPTVVDQDEHPRPETTLEGL 234 (400)
T ss_pred CcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccC---CC--CceeeCCCCccCCCCCHHHH
Confidence 47899999999999999999999999999999999999999999999998632 11 11357889999999999999
Q ss_pred hcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 273 ~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
.++||+++|+||||++|||+++|||+|+||+|+|.|++++.+|.+||+
T Consensus 235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~ 282 (400)
T TIGR02430 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARIL 282 (400)
T ss_pred hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEE
Confidence 999999987789999999999999999999999999999999999884
No 22
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.5e-49 Score=387.32 Aligned_cols=264 Identities=41% Similarity=0.614 Sum_probs=226.0
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||||+++|||+| ++|.+++.++.+|+.+|+++||+|+||++++||.+++|+..+... ++++++.++..+|++...
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~~ 79 (393)
T PRK05656 2 QDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHSV 79 (393)
T ss_pred CcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCCc
Confidence 579999999999998 568888999999999999999999999999999999998865433 556888899999996458
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC-----cc-Chh-hhh-----hhccccCCCchH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QV-NPK-VEI-----FTQARDCLLPMG 196 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~-----~~-~~~-~~~-----~~~~~~~~~~~g 196 (320)
|+++|+++|+||+.+|..|+++|++|.+|++|++|+|+||..|+.... .+ ... +.. ++..+ ....|+
T Consensus 80 p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a 158 (393)
T PRK05656 80 PAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAF-NDYHMG 158 (393)
T ss_pred ceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccc-cCCCHH
Confidence 999999999999999999999999999999999999999998752110 00 100 100 11111 124699
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCC
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~ 276 (320)
+.|++||++||+|||++|+||++||+||++|+..++|++||+||+++.+. .++.+++.||++|+++|+|.+.++|
T Consensus 159 ~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~-----~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 159 ITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRK-----GEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCC-----CCceEeccCCCCCCCCCHHHHhcCC
Confidence 99999999999999999999999999999998888999999999875321 1235689999999999999999999
Q ss_pred CcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 277 ~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|+|.++++||++|||+++|||+|+||+|+|.|++++.+|.+||+
T Consensus 234 p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~ 277 (393)
T PRK05656 234 PAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIA 277 (393)
T ss_pred CCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEE
Confidence 99987789999999999999999999999999999999998884
No 23
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-50 Score=368.37 Aligned_cols=304 Identities=75% Similarity=1.125 Sum_probs=272.4
Q ss_pred HhHHHHHHHhccCCCCCCCCCCccccccccccccccccCCCCCCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHH
Q 020887 4 ALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLK 83 (320)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~ 83 (320)
+..||++||.||+||||. ...+++-|-.|..+-|| .+|+||++.||+++|.++|.+++..+.+|...+.+
T Consensus 1 ~~er~~~ll~hl~~~s~s----~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~ 70 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSSS----ASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLR 70 (435)
T ss_pred CchHHHHHHHhcCCcccc----cccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHHH
Confidence 357999999999999876 34567889888777666 88999999999999988899999999999999999
Q ss_pred HHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEe
Q 020887 84 AVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163 (320)
Q Consensus 84 ~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G 163 (320)
..+++.+++|+.|..|++|++...+. +...+|..+.+.|+|...|..++|+.|+||++|+..-+..|++|.+|+.|..|
T Consensus 71 a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~G 149 (435)
T KOG1389|consen 71 AVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAG 149 (435)
T ss_pred HHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccc
Confidence 99999999999999999999987765 45668888899999999999999999999999999999999999999999999
Q ss_pred ecccccc-cccccCccChhhhhhhccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeee
Q 020887 164 LESMTVN-SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNT 242 (320)
Q Consensus 164 ~E~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~ 242 (320)
+|+|+.. |..|.....+.+..+....+...+||.+.|..+++||+|||++|++|+.||++|+.+-+.|+|++||+||+.
T Consensus 150 vESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~t 229 (435)
T KOG1389|consen 150 VESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKT 229 (435)
T ss_pred hhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeee
Confidence 9999876 555544444444444445566788999999999999999999999999999999999999999999999988
Q ss_pred cccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 243 KIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 243 ~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
+..+|. +..|+.+++.||++|+++|++.|.+++|+|.++|.-|++|+|+++|||+||||+...+|.++|++-++++
T Consensus 230 kv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvf 305 (435)
T KOG1389|consen 230 KVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVF 305 (435)
T ss_pred eccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEe
Confidence 887887 4456788889999999999999999999999999999999999999999999999999999999766654
No 24
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.1e-49 Score=384.71 Aligned_cols=270 Identities=41% Similarity=0.609 Sum_probs=233.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|||+|++||||++++.+.+++.+..+|+.+|+++||+|+||++++||.+++|+..+....+.++++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 57999999999999854677788999999999999999999999999999999998876543457899999999997669
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-cChhhhhhhccccCCCchHHHHHHHHHHhC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-VNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~A~~~~~~yG 207 (320)
|+++|+++|+||+.||..|+++|++|++|++|++|+|+||+.|+..... ....+. .....+....|+.+++.++.+|+
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~-~~~~~~~~~~m~~~ae~~a~~~~ 160 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWL-VEHKPEIYWSMLQTAENVAKRYG 160 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhh-hccCCccccCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999887532211 111111 00001111357889999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecc--cCCCCC--ccceEEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 020887 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI--VDPKTG--VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG 283 (320)
Q Consensus 208 itre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~--~~p~a~--~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~g 283 (320)
++||++|+|+..||++|..++++|+|++||+||+.+. +||+++ +++.++++.||++|+++|+|+|.++||+| +.|
T Consensus 161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g 239 (392)
T PRK07108 161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG 239 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence 9999999999999999999999999999999998653 578886 55567899999999999999999999998 568
Q ss_pred cccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 284 plt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||++|||+++|||+|+||+|+++|++++++|+++|+
T Consensus 240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~ 276 (392)
T PRK07108 240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFR 276 (392)
T ss_pred CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 9999999999999999999999999999999999874
No 25
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.5e-49 Score=388.33 Aligned_cols=261 Identities=36% Similarity=0.521 Sum_probs=218.7
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
+++|||||+++|||+| +.|.+.+.++.+|+.+|+++||+|+||++++||.+++|+..+... ..++++.++..+|++..
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 3579999999999998 456667789999999999999999999999999999998764332 35778889999999656
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC-------c----------cC------hhhhh
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-------Q----------VN------PKVEI 184 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~-------~----------~~------~~~~~ 184 (320)
+|+++++++|+||..++..|+++|++|.+|+||++|+|+|++.|+.... . +. ..+..
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLA 159 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccc
Confidence 8999999999999999999999999999999999999999886641100 0 00 00111
Q ss_pred h-----hccccC--CCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEE
Q 020887 185 F-----TQARDC--LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTI 257 (320)
Q Consensus 185 ~-----~~~~~~--~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~ 257 (320)
+ .....+ ...|++.|++||++||+||||+|+|+++||+||..+++.|+|+ ||+||+.+..|| +
T Consensus 160 ~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~~~np---------~ 229 (426)
T PRK08170 160 PVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDRDGKF---------Y 229 (426)
T ss_pred cccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecCCCCe---------e
Confidence 0 010111 1379999999999999999999999999999999988889998 999998422233 5
Q ss_pred eccCCCCCCCCHHHHhcCCCccc-CCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 258 SVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 258 ~~De~~r~~~t~e~l~~~~~i~~-~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++||++|+++|+|+|+++||+++ |.++||++|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 230 a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~ 293 (426)
T PRK08170 230 DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIV 293 (426)
T ss_pred ccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 67999999999999999999997 5578999999999999999999999999999999998874
No 26
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=7.2e-49 Score=382.67 Aligned_cols=264 Identities=37% Similarity=0.571 Sum_probs=221.3
Q ss_pred CceEEEecccccccccC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcC
Q 020887 49 DDVVIVAAYRTAICKAK-----RGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~-----~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lG 123 (320)
++|+|||+++|||+|.. +|.+++.++.+|+.+|+++||+|+||+++|||.+++|+..+......+.++......+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 57999999999999842 4888999999999999999999999999999999999887543212345555556667
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC------cc--ChhhhhhhccccCCCch
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QV--NPKVEIFTQARDCLLPM 195 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~------~~--~~~~~~~~~~~~~~~~~ 195 (320)
++..+|+++|+++|+||..++..|+++|++|.+|++|++|+|+|++.|+.... .. ++.+.. +. ..+...|
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 159 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIE-YD-LTTGYVM 159 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCc-cc-ccCCCCH
Confidence 76678999999999999999999999999999999999999999987742100 00 111110 11 1122359
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcC
Q 020887 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (320)
Q Consensus 196 g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~ 275 (320)
+++|++||++||+|||++|+|+++||+||.+|+..|+|++||+|+++. + .+ .+.+++.|+++|+++|+|+|+++
T Consensus 160 a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~-~---~~--~~~~~npda~~r~~~t~e~~~~~ 233 (394)
T PRK06445 160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE-V---EG--KKKVVDVDQSVRPDTSLEKLAKL 233 (394)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec-C---CC--CceeeCCCCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999999873 1 11 12457889999999999999999
Q ss_pred CCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 276 ~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||+++|+||||++|||+++|||+|+||+|+++|++++.+|++||+
T Consensus 234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~ 278 (394)
T PRK06445 234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIR 278 (394)
T ss_pred CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 999987789999999999999999999999999999999998884
No 27
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.4e-48 Score=379.27 Aligned_cols=268 Identities=34% Similarity=0.441 Sum_probs=226.3
Q ss_pred CCCCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcC
Q 020887 44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (320)
Q Consensus 44 ~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lG 123 (320)
-+.+.++|+|||++||||+| ++|.+++.++.+|+.+|+++||+|+||++++||.+++|+..+.+. +.++++..+..+|
T Consensus 2 ~~~~~~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag 79 (397)
T PRK06954 2 TAVDQDPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAG 79 (397)
T ss_pred CCCCCCCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCC
Confidence 35677899999999999998 467888999999999999999999999999999999998875543 5567777778889
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC---c--c-C-hhhh----hh-hccccC
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---Q--V-N-PKVE----IF-TQARDC 191 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~---~--~-~-~~~~----~~-~~~~~~ 191 (320)
+|..+|+++|+++|+||+.++..|+++|++|.+|++|++|+|+||+.++.... . + . ..+. +. ...+..
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 97669999999999999999999999999999999999999999977652110 0 0 0 0011 11 011111
Q ss_pred CCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHH
Q 020887 192 LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIAD 271 (320)
Q Consensus 192 ~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~ 271 (320)
...|+++|++||++||+|||++|+||++||+||.+++..|+|+++++||+++.+ .+..+++.||++| ++++|.
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~------~~~~~v~~D~~pr-~~~~~~ 232 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGK------KGDTVIDRDEQPF-KANPEK 232 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccC------CCCeEeccCCCcC-CCCHHH
Confidence 357999999999999999999999999999999986556699999999987531 1124689999999 599999
Q ss_pred HhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 272 LAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 272 l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+.+++|+|+|+|+||++|||+++|||+|+||+|+++|++++++|++||+
T Consensus 233 l~~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~ 281 (397)
T PRK06954 233 IPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVV 281 (397)
T ss_pred HhCCCCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEE
Confidence 9999999998899999999999999999999999999999999999874
No 28
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.5e-48 Score=381.82 Aligned_cols=256 Identities=31% Similarity=0.506 Sum_probs=218.7
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
|++|||||++||||+| +.|.+.+.++.||+.+|++++|+|+||++++||.+++|++.+... +.++++.++...|++..
T Consensus 6 m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~~ 83 (427)
T PRK09268 6 VRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSPY 83 (427)
T ss_pred CCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCCC
Confidence 3689999999999998 467788999999999999999999999999999999998876432 46788988888888667
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-------------cC----------hhhhh
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VN----------PKVEI 184 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-------------~~----------~~~~~ 184 (320)
+|+++|+++|+||+.++.+|+++|++|.+|++||+|+|+||+.|+..... +. +.+..
T Consensus 84 ~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T PRK09268 84 TPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLA 163 (427)
T ss_pred CceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccccccc
Confidence 89999999999999999999999999999999999999999887532100 00 00000
Q ss_pred h--hccc--cCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEecc
Q 020887 185 F--TQAR--DCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260 (320)
Q Consensus 185 ~--~~~~--~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~D 260 (320)
. +... .....|+.++++||++||+|||++|+||++||+||++++++|+|++||+|+ ++ ++.|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~--------~~------~~~D 229 (427)
T PRK09268 164 PEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPF--------LG------LTRD 229 (427)
T ss_pred ccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCc--------cC------cccC
Confidence 0 0000 112359999999999999999999999999999999999999999999664 21 6789
Q ss_pred CCCCCCCCHHHHhcCCCcccC--CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 261 DGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 261 e~~r~~~t~e~l~~~~~i~~~--~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
+++|+++|+|+|+++||+|+| +|+||++|||+++|||+|+||+|+++|++++++|+++|
T Consensus 230 ~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i 290 (427)
T PRK09268 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYL 290 (427)
T ss_pred CCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEE
Confidence 999999999999999999976 57799999999999999999999999999999998887
No 29
>PRK05790 putative acyltransferase; Provisional
Probab=100.00 E-value=6.7e-48 Score=375.82 Aligned_cols=265 Identities=44% Similarity=0.600 Sum_probs=223.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|+|+++|||+| +.|.+++.+..+|+.+|+++||+|+||+++|||.+++|+..+... +.++++.+...+|++...
T Consensus 2 ~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~~ 79 (393)
T PRK05790 2 KDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVEV 79 (393)
T ss_pred CceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCCC
Confidence 579999999999998 456777899999999999999999999999999999998765432 456677777888996457
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccc-----cCccC-hhhhh---hhcccc--CCCchHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN-PKVEI---FTQARD--CLLPMGI 197 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~-----~~~~~-~~~~~---~~~~~~--~~~~~g~ 197 (320)
|+++++++|+||..+|..|+++|++|.+|+|||+|+|++|+.|... ...+. ....+ +...++ ....|++
T Consensus 80 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (393)
T PRK05790 80 PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGI 159 (393)
T ss_pred ceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHH
Confidence 9999999999999999999999999999999999999998876421 10110 00101 000111 1357999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~ 277 (320)
.|++||++||+||||+|+|+++||+||++||++|+|+++|+|+.+..+ .+++.+++.|+.+|.+++.|.+.+++|
T Consensus 160 ~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~-----~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 160 TAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR-----KGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC-----CCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 999999999999999999999999999999999999999999976521 123456899999999999999999999
Q ss_pred cccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 278 i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+++|+||||++|||+++|||+|+||+|+|+|++++.+|+++|+
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~ 277 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIV 277 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEE
Confidence 9988889999999999999999999999999999999998884
No 30
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=2e-46 Score=364.69 Aligned_cols=261 Identities=49% Similarity=0.664 Sum_probs=220.4
Q ss_pred EEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeE
Q 020887 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131 (320)
Q Consensus 52 ~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~ 131 (320)
+|+|+++|||+| +.+.+++.+..+|+.+|+++||+|+||+++|||.+++++..+... .+.++..++..+|++...|++
T Consensus 1 ~Ivg~~~Tpf~r-~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGR-FGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 699999999998 456667899999999999999999999999999999987765543 456777888999995347899
Q ss_pred EecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCcc-----C---hhhhhhhccc--cCCCchHHHHHH
Q 020887 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-----N---PKVEIFTQAR--DCLLPMGITSEN 201 (320)
Q Consensus 132 ~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~-----~---~~~~~~~~~~--~~~~~~g~~A~~ 201 (320)
+++++|+|++.+|..|+++|++|.+|+||++|+|+++..+....... . ..+..+.... .....|++.|++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 158 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN 158 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999987764321111 1 1111111111 123568999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC
Q 020887 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (320)
Q Consensus 202 ~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~ 281 (320)
||++||+||||+|+|+++||+||.+||+.+.+.++|+|++++.+ ++..+++.|+++|+++|+|+|+++|||++|
T Consensus 159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p 232 (386)
T cd00751 159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232 (386)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999986531 123577889999999999999999999986
Q ss_pred CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 282 ~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+||||++|||+++|||+|+||+|+++|++++.+|.++|+
T Consensus 233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~ 271 (386)
T cd00751 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIV 271 (386)
T ss_pred CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEE
Confidence 678999999999999999999999999999999988874
No 31
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-47 Score=349.00 Aligned_cols=266 Identities=38% Similarity=0.532 Sum_probs=236.9
Q ss_pred CCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (320)
Q Consensus 46 ~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~ 125 (320)
+..++|+||++.|||+|- |+|++..++..+|...|+++||+++.+++.+++.+++|++..... +.+++|..+...|||
T Consensus 3 ~~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp 80 (396)
T KOG1390|consen 3 LSSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLP 80 (396)
T ss_pred CCCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCC
Confidence 456789999999999997 789999999999999999999999999999999999999987765 789999999999999
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccc----cCcc------Chhhhh-hhccccCCCc
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV----VGQV------NPKVEI-FTQARDCLLP 194 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~----~~~~------~~~~~~-~~~~~~~~~~ 194 (320)
..++++++|..|+||+.|+..|++.|+.|.+|+|+++|.|+||+.|+.. +..+ |-...| ++..++ ...
T Consensus 81 ~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~-~~~ 159 (396)
T KOG1390|consen 81 YSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYD-KCH 159 (396)
T ss_pred cceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhc-cCC
Confidence 9999999999999999999999999999999999999999999999521 1111 111111 222222 367
Q ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhc
Q 020887 195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274 (320)
Q Consensus 195 ~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~ 274 (320)
||.+||..+++|+|||||+|+||+.|++++.++|++|.|++||+||+++.+ ++...++.||.+++-.+.+.+.+
T Consensus 160 MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~------rg~~~v~~DEe~~k~~~~~~~~~ 233 (396)
T KOG1390|consen 160 MGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTK------RGETVVKKDEEPKKGSNIEKLSK 233 (396)
T ss_pred cchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecC------CCcEEeccchhhhcccchhhhcc
Confidence 999999999999999999999999999999999999999999999999752 33578899999998899999999
Q ss_pred CCCcccC-CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 275 LKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 275 ~~~i~~~-~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++++|.+ ++++|+.|.|.++|||+|+||+|+|.+++++++|+|||+
T Consensus 234 l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv 280 (396)
T KOG1390|consen 234 LRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIV 280 (396)
T ss_pred ccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHh
Confidence 9999965 478999999999999999999999999999999999986
No 32
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=100.00 E-value=6.6e-47 Score=338.13 Aligned_cols=265 Identities=35% Similarity=0.491 Sum_probs=239.5
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
.+-|+||++.||+||. |+|.+++++..+|...|++.||+.+++.++.+|.+|+|++..+..++.+++|++.+..|+|.+
T Consensus 3 ~kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e 81 (396)
T KOG1391|consen 3 GKGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKE 81 (396)
T ss_pred cceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCc
Confidence 4569999999999997 789999999999999999999999999999999999999988777788899999999999999
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc-----ccCcc-------ChhhhhhhccccCCCch
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQV-------NPKVEIFTQARDCLLPM 195 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~-----~~~~~-------~~~~~~~~~~~~~~~~~ 195 (320)
.|++++|+.|+||.++|..+++.|.-|+++++|++|.|.||..|+- ++..+ +..|..+... +.-.+|
T Consensus 82 ~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~-y~kLpM 160 (396)
T KOG1391|consen 82 TPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQ-YVKLPM 160 (396)
T ss_pred cCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccch-hhhcch
Confidence 9999999999999999999999999999999999999999999983 22222 1223222221 223689
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcC
Q 020887 196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275 (320)
Q Consensus 196 g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~ 275 (320)
+++||.+..+|.|+||+.|+|+..|++++.++.++|+|++||.|++++.+ ++..++..||++|+.+|+|+|.++
T Consensus 161 a~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~k------kge~~f~vDEHpRp~TT~E~L~KL 234 (396)
T KOG1391|consen 161 AMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTK------KGEQTFQVDEHPRPQTTLEQLQKL 234 (396)
T ss_pred hhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeec------cCceeeEecCCCCccchHHHHhhC
Confidence 99999999999999999999999999999999999999999999999753 234678899999999999999999
Q ss_pred CCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 276 ~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||+|.|+|.+|++|.|.++|||+|+|++|||.+|+++++|++|||
T Consensus 235 ppvFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiV 279 (396)
T KOG1391|consen 235 PPVFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIV 279 (396)
T ss_pred CchhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhh
Confidence 999999999999999999999999999999999999999999986
No 33
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=8.7e-46 Score=359.71 Aligned_cols=253 Identities=36% Similarity=0.500 Sum_probs=209.3
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||+++|||+| +.+.+++.+..+|+.+|+++||+|+||++++||.+++|+......+..++++......|++...
T Consensus 2 ~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 2 AEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 579999999999998 4566778899999999999999999999999999999976332212245677766778886568
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc----ccC--c----c--ChhhhhhhccccCCCchH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVG--Q----V--NPKVEIFTQARDCLLPMG 196 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~----~~~--~----~--~~~~~~~~~~~~~~~~~g 196 (320)
|.++++++|+||..++..|+++|++|.+|+|||+|+|+++..|+. ... . . ...|.+... . +...++
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~~ 158 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYG-D-QEVSQF 158 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhcc-C-CCCCHH
Confidence 999999999999999999999999999999999999999876631 110 0 0 011222111 1 122344
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCC
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~ 276 (320)
..|++||++||+|||++|+|+++||+||.+||++|+|+++++|+.. ++.||.+| ++|+|+|+++|
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~ 223 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLK 223 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCC
Confidence 4699999999999999999999999999999999999999888641 46799999 79999999999
Q ss_pred CcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 277 ~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|+++ ++|||++|||+++|||+|+||+|+|+|++++.+|.+||+
T Consensus 224 ~i~~-~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~ 266 (382)
T PRK07801 224 PLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIH 266 (382)
T ss_pred CCCC-CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEE
Confidence 9993 369999999999999999999999999999999988874
No 34
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=2.2e-45 Score=353.46 Aligned_cols=242 Identities=34% Similarity=0.489 Sum_probs=211.7
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
+|+|+|++||||+| +.|.++++++.+|+..+++++++ ||+ ++||.+++|++.+. +.++++.++..+|++..+|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence 59999999999998 57889999999999999999854 996 89999999988644 3567888899999976799
Q ss_pred eEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhCCC
Q 020887 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209 (320)
Q Consensus 130 ~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yGit 209 (320)
+++|+++|+||+.+|..|++.|++|++|++|++|+|+||+.|+........ +. .. ...|+++|++||++||+|
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~---~~---~~-~~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSP---ET---IG-DPDMGVAAEYVAERYNIT 147 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCc---cc---cc-CccHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999887531111100 01 11 123999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHH-hcCCCcccCCCcccCC
Q 020887 210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL-AKLKPAFKKDGTTTAG 288 (320)
Q Consensus 210 re~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l-~~~~~i~~~~gplt~~ 288 (320)
||++|+||..||+|+.+++++++|++||+|++. ++ ||.+|+++|+|++ .++||+|+|++|||++
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~ 212 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence 999999999999999999999999999999751 45 8899999999999 5679999877899999
Q ss_pred CCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 289 d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~ 244 (361)
T PRK06690 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFV 244 (361)
T ss_pred ccCCCCCCeEEEEEecHHHHHHcCCCceEEEE
Confidence 99999999999999999999999999998874
No 35
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=100.00 E-value=2.2e-45 Score=357.35 Aligned_cols=260 Identities=47% Similarity=0.658 Sum_probs=216.5
Q ss_pred EEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEE
Q 020887 53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT 132 (320)
Q Consensus 53 IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~ 132 (320)
|+|+++|||+| +.|.+.+.+..+|+.+|+++||+|+||+++|||.+++++..+... .+.+++.++..+|++...|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 78999999998 466777899999999999999999999999999999987655432 3556778889999964589999
Q ss_pred ecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC------cc-C---hhhhhhhcccc--CCCchHHHHH
Q 020887 133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QV-N---PKVEIFTQARD--CLLPMGITSE 200 (320)
Q Consensus 133 v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~------~~-~---~~~~~~~~~~~--~~~~~g~~A~ 200 (320)
++++|+|+..++..|+++|++|.+|+||++|+|++++.+..... .. . ..|..+..... ....|++.++
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 99999999999999999999999999999999998876532110 01 0 11111111111 1356999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCccc
Q 020887 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (320)
Q Consensus 201 ~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~ 280 (320)
+||++||+||||+++|+++||+||++|+++|+|++||+|+..+.+ ++.++++.|+.+|+++|+|+|+++||+++
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~------~~~~~~~~da~~r~~~t~e~v~~s~~i~~ 232 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGR------KGPVTVSTDEGIRPNTTLEKLAKLKPAFD 232 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 999999999999999999999999999999999999999854311 12367889999999999999999999996
Q ss_pred CCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 281 ~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|.+.||++|||+++|||+|+||+|+|.|++++.+|.++|+
T Consensus 233 P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~ 272 (386)
T TIGR01930 233 PNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIV 272 (386)
T ss_pred CCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEE
Confidence 3333999999999999999999999999999999998874
No 36
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=4.4e-44 Score=350.13 Aligned_cols=262 Identities=37% Similarity=0.509 Sum_probs=218.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
++|+|||+++|||+|..+|.+++.+..+|+.+|+++||+|+ ||+++|||.+++|+..+...++.++++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 47999999999999844577789999999999999999997 999999999999876543323456788899999994 6
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc--------c--------------Chhhhhh
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------V--------------NPKVEIF 185 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~--------~--------------~~~~~~~ 185 (320)
.|+++++++|+||..++..|+++|++|.+|+|||+|+|+++..++..... + ++.|.++
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDP 160 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccc
Confidence 89999999999999999999999999999999999999998765210000 0 0112111
Q ss_pred hcc-cc--CCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCC
Q 020887 186 TQA-RD--CLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDG 262 (320)
Q Consensus 186 ~~~-~~--~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~ 262 (320)
... .. ....||+.+++|+++||++||++++|++++|++|..+.+++++..+|+||+.| .+ +.++.|++
T Consensus 161 ~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p----~~-----~~~~~d~~ 231 (406)
T PRK07851 161 REDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLP----DG-----TVVSTDDG 231 (406)
T ss_pred ccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecC----CC-----ceeCCCCC
Confidence 100 00 12346889999999999999999999999999999999999999999999865 21 35778999
Q ss_pred CCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 263 IRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 263 ~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+|+++|+|+|+++||+++|++.||++|||+++|||+|+||+|+|+|++++++|++||+
T Consensus 232 ~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~ 289 (406)
T PRK07851 232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV 289 (406)
T ss_pred ccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEE
Confidence 9999999999999999974444999999999999999999999999999999999884
No 37
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=100.00 E-value=5.6e-44 Score=348.28 Aligned_cols=263 Identities=33% Similarity=0.494 Sum_probs=219.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|+|+++|||+| +.|.+++.+..+|+.+++++||+|+||++++||++++|+...... +.++++.++..+|++...
T Consensus 1 ~~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 78 (394)
T PLN02644 1 RDVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPST 78 (394)
T ss_pred CcEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCC
Confidence 369999999999998 456677899999999999999999999999999999998764332 445677888999997668
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc-----CccC--hhh----hh-hhccccCCCchH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVN--PKV----EI-FTQARDCLLPMG 196 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~-----~~~~--~~~----~~-~~~~~~~~~~~g 196 (320)
|+++++++|+||..+|.+|+++|++|.+|+||++|+|++++.++... ..+. ..+ .. +..++ ....|+
T Consensus 79 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 157 (394)
T PLN02644 79 ICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVY-NDFGMG 157 (394)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhcccccccccc-CCCcHH
Confidence 99999999999999999999999999999999999999987663111 0000 000 00 11111 123589
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccce-EEEeccCCCCCCCCHHHHhcC
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKR-VTISVDDGIRPNTTIADLAKL 275 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~-~~~~~De~~r~~~t~e~l~~~ 275 (320)
+.|++||++||+||||+|+|+++||+||.+||+++.|++||+|+++..++ +++ .+++.||.+| +.+.+.+..+
T Consensus 158 ~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~-----~~~~~~~~~de~~~-~~~~~~l~~l 231 (394)
T PLN02644 158 VCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGR-----GRPSVIVDKDEGLG-KFDPAKLRKL 231 (394)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCC-----CCCceEeecCCCcC-CCCHHHHhCC
Confidence 99999999999999999999999999999999999999999999875211 111 3478899997 7899999999
Q ss_pred CCcccC-CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 276 KPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 276 ~~i~~~-~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
+|+|++ +|.+|.+|||+++|||+++||+|++.|++++.+|+++|+
T Consensus 232 ~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~ 277 (394)
T PLN02644 232 RPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIR 277 (394)
T ss_pred CCcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEE
Confidence 999976 589999999999999999999999999999999988884
No 38
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=6.8e-42 Score=334.03 Aligned_cols=231 Identities=19% Similarity=0.234 Sum_probs=188.8
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||+++|||+| +.+.+..+|+.+++++||+|+||+++|||.+++|+...... .......++..+|++ ..
T Consensus 7 ~~v~IvG~g~tp~~~-----~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~-~~~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGE-----RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIG-SGKSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEeccccccc-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-ccchhHHHHHHcCCC-CC
Confidence 679999999999997 25788999999999999999999999999999987653211 111234577889996 58
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc--cChhhhhhhccccCCCchHHHHHHHHHHh
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--VNPKVEIFTQARDCLLPMGITSENVAQRF 206 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~A~~~~~~y 206 (320)
|.++++++|+||..+|.+|+++|++|.+|++||+|+|++++.++..... ....+..+.....+...|++.+++||++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998766521110 11112111111111235889999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCC
Q 020887 207 GVTRQEQ----DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (320)
Q Consensus 207 Gitre~l----a~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~ 282 (320)
|+||||+ ++|+++||+||.+||++ + +|+++|+|+|+++||+++
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~np~A-------------------~------------~r~~~t~e~v~~s~~v~~-- 206 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGARNPKA-------------------H------------LRKAVTEEQVLKAPMIAG-- 206 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhcCChh-------------------h------------cCCCCCHHHHhcCCcccC--
Confidence 9999999 79999999999998876 2 244699999999999995
Q ss_pred CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 283 gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||+++|||+++|||+|+||+|+++||+++++|.++|+
T Consensus 207 -Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~ 243 (398)
T PRK06157 207 -PLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVK 243 (398)
T ss_pred -CCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEE
Confidence 9999999999999999999999999999986777763
No 39
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=8.1e-42 Score=336.19 Aligned_cols=228 Identities=17% Similarity=0.101 Sum_probs=188.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHH-HHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~-va~~lGl~~~ 127 (320)
++|+|||+++|||+|. ..+.+..+|+.+|+++||+|+||+++|||.+++++..+... +.++++. ++..+|++ .
T Consensus 16 ~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~-~ 89 (430)
T PRK06365 16 RDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLV-P 89 (430)
T ss_pred cCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCC-C
Confidence 6899999999999983 34678899999999999999999999999988876543332 3444544 47899996 4
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-----cChhhhhhhccccCCCchHHHHHHH
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-----VNPKVEIFTQARDCLLPMGITSENV 202 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~A~~~ 202 (320)
.|+++++++|+||..+|..|++.|++|.+|+|||+|+|+++..++..... .+..|..+... .....|++.+++|
T Consensus 90 ~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~-~~~~~~al~a~ry 168 (430)
T PRK06365 90 KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGG-FYTGYYAMMAVRH 168 (430)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccC-ccHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999998766432111 12223221111 1124589999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCC
Q 020887 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (320)
Q Consensus 203 ~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~ 282 (320)
|++||+|||++++|+++||+||++||.+ ++ |.++|+|+|+++|+|++
T Consensus 169 ~~~yG~t~e~la~vav~~~~~A~~NP~A-------------------~~------------~~~~t~e~v~~s~~i~~-- 215 (430)
T PRK06365 169 MYEFGTTVEQLAKVSVKNHGNAIHNPFA-------------------QS------------PMKITVEDVRKSPMVSY-- 215 (430)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhhCcHh-------------------hc------------CCCCCHHHHhcCCcccc--
Confidence 9999999999999999999999998776 21 33689999999999984
Q ss_pred CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcE
Q 020887 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317 (320)
Q Consensus 283 gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~a 317 (320)
|||++|||+++|||+|+||+|||+|++++.+|+.
T Consensus 216 -Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~ 249 (430)
T PRK06365 216 -PLTRLDVCAMSDGAACAILASEDKAFEITDKPVL 249 (430)
T ss_pred -CcchhhcCCcCCceEEEEEecHHHHHhcCCCCeE
Confidence 9999999999999999999999999999998876
No 40
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=3.7e-41 Score=326.70 Aligned_cols=229 Identities=16% Similarity=0.139 Sum_probs=180.2
Q ss_pred CCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCC-CCCCcEEEEeecCCCCchhhHHHHHHHHcCC
Q 020887 47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNP-SEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (320)
Q Consensus 47 ~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAG-l~~-~dID~vi~g~~~~~~~~~~~~a~~va~~lGl 124 (320)
+|++|+|+|++.|||+|+ ..+.+..+|+.+|+++||+||| |++ +|||++++++. ............+...+|+
T Consensus 2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~ 76 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGG 76 (385)
T ss_pred CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHccc
Confidence 578999999999999962 2478899999999999999999 997 79999987542 1111001112235577888
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc---ccCccChhhhhhhccccCCCchHHHHHH
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS---VVGQVNPKVEIFTQARDCLLPMGITSEN 201 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~A~~ 201 (320)
. .+|.+++ |+||..++..|+++|++|.+|+|||+|+|+++..... .....++.|+.+.....+...+++.|++
T Consensus 77 ~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~r 152 (385)
T PRK06066 77 A-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVK 152 (385)
T ss_pred C-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHH
Confidence 3 5677777 8999999999999999999999999999987652211 0111122232222211122356999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC
Q 020887 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (320)
Q Consensus 202 ~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~ 281 (320)
||++||+|+||+++|++++|+||++||+| ++ |+++|+|+|+++|+|++
T Consensus 153 ym~~yG~t~E~lA~Vavk~r~nA~~NP~A-------------------~~------------r~~~t~edvl~S~~ia~- 200 (385)
T PRK06066 153 FMSRKGITREDLALVVEKNKKAGLSNPRA-------------------SY------------ASNISLEDVLSSEYVVY- 200 (385)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhcCChh-------------------hc------------CCCCCHHHHhcCCcccC-
Confidence 99999999999999999999999998877 22 34699999999999995
Q ss_pred CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 282 ~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
|||++|||+++|||+|+||+|+|+|++++++|+ ||
T Consensus 201 --Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I 235 (385)
T PRK06066 201 --PLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WI 235 (385)
T ss_pred --CchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EE
Confidence 999999999999999999999999999999998 66
No 41
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=100.00 E-value=1.2e-41 Score=331.43 Aligned_cols=261 Identities=39% Similarity=0.510 Sum_probs=218.3
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHc--CCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT--RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dA--Gl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~ 125 (320)
+++|+|+|+++||||+..++.+.++..++|.....+..+++. +|++.+||.+++|++.+.+.++.++++.++..+|++
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 468999999999999842356666666666666666666433 566667888999988877645679999999999997
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccc-cccCcc-----ChhhhhhhccccCCCchHHHH
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI-SVVGQV-----NPKVEIFTQARDCLLPMGITS 199 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~g~~A 199 (320)
..+|.++|+++|+||++|+..|+++|++|.+|++|++|+|+||+.|+ .++... ++.+.+......+...|+++|
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 66999999999999999999999999999999999999999999997 333221 222222211122235799999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCC--CCHHHHhcCCC
Q 020887 200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN--TTIADLAKLKP 277 (320)
Q Consensus 200 ~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~--~t~e~l~~~~~ 277 (320)
++||++||+||||+|+||++||+||++||++|+| +||+|+++.. ..+..|+.+|.+ .+.|.+.+++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~----------~~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLN----------SPVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecC----------CceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999999 9999998863 146789999999 99999999999
Q ss_pred cccCC-CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 278 AFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 278 i~~~~-gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
.+++. +.+|.+|.|+++||++++++++++.+++++++|++++
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~ 272 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAI 272 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHH
Confidence 99754 6999999999999999999999999999999999874
No 42
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=8.5e-41 Score=325.27 Aligned_cols=228 Identities=17% Similarity=0.156 Sum_probs=185.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|+|++.|||+|+ .+.+..+|+.+|+++||+|+||+++|||.+++++...........+..++..+|+. .+
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CC
Confidence 5799999999999983 56789999999999999999999999999998863221111234666788999984 58
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc----CccChhhhhhhccccCCCchHHHHHHHHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~A~~~~~ 204 (320)
|.++++++|+||..++..|+++|++|.+|+|||+|+|+++....... ...++.|..+.. ......|++.+++||+
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g-~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLN-PNLIWIFAMEMHRYMA 161 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCC-ccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999764211000 011222222211 1112358999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 020887 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (320)
Q Consensus 205 ~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gp 284 (320)
+||+|+||++.|++++|+||.+||+| ++ |+++|+|+|+++|+|++ |
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~NP~A-------------------~~------------r~~lt~e~vl~s~~ia~---P 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALNNPYA-------------------QL------------GSKITVEDVLKSEVLVW---P 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhccCchh-------------------hh------------cCCCCHHHHhcCCcccC---C
Confidence 99999999999999999999998877 22 34699999999999995 9
Q ss_pred ccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcE
Q 020887 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317 (320)
Q Consensus 285 lt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~a 317 (320)
||++|||+++|||+|+||+|+|+|++++.+|+.
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~ 240 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPVW 240 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCEE
Confidence 999999999999999999999999999988864
No 43
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=324.20 Aligned_cols=230 Identities=18% Similarity=0.254 Sum_probs=190.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|+|++.|||+|+ .+.+..+|+.+|+++||+|+||++++||.+++|+..+... ...++..++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~~-----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGRR-----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 5799999999999983 6788999999999999999999999999999998654322 345678899999996 46
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-----cChhhhh-hhccccCCCchHHHHHHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-----VNPKVEI-FTQARDCLLPMGITSENV 202 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~g~~A~~~ 202 (320)
+.++++++|+||..+|..|+++|++|.+|+|||+|+|+++..++..... .+..+.. +.. ......+++.+++|
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~a~~a~~~ 152 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYG-TTFPTYYALYATRH 152 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCC-CChHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999998765421100 1111221 111 11123567899999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCC
Q 020887 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (320)
Q Consensus 203 ~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~ 282 (320)
|++||+||||+++|+++||+||.+||++ +| |+++|+|+|+++|++++
T Consensus 153 m~~~g~t~e~~a~va~~~~~~A~~np~a-~~------------------------------~~~i~~e~v~~s~~i~~-- 199 (385)
T PRK12578 153 MAVYGTTEEQMALVSVKAHKYGAMNPKA-HF------------------------------QKPVTVEEVLKSRAISW-- 199 (385)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHhcCChh-hc------------------------------CCCCCHHHHhcCCccCC--
Confidence 9999999999999999999999999865 33 23589999999999985
Q ss_pred CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 283 gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||++|||+++|||+|+||+|+|+|++++.+|.++|+
T Consensus 200 -Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~ 236 (385)
T PRK12578 200 -PIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWIT 236 (385)
T ss_pred -CccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEE
Confidence 9999999999999999999999999999977778874
No 44
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.4e-40 Score=323.52 Aligned_cols=231 Identities=15% Similarity=0.108 Sum_probs=189.4
Q ss_pred CCceEEEecccccc-cccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCc-hhhHHHHHHHHcCCC
Q 020887 48 DDDVVIVAAYRTAI-CKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAMECRMAAFYAGFP 125 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~-~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~-~~~~a~~va~~lGl~ 125 (320)
+++|+|||++.|+| +++ .+.+..+|+.+|+++||+|+||+++|||.+++++. +.... ...++..++..+|+.
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl~ 75 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGAT 75 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCCC
Confidence 46899999999999 652 56789999999999999999999999999998863 22211 123456788999994
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHH
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR 205 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~ 205 (320)
..++++++++|++|..++..|+++|++|.+|+|||+|+|+++.....+....++.|..+.... ....+++.+++||++
T Consensus 76 -~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~-~~~~~al~a~~ym~~ 153 (386)
T PRK08313 76 -GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAG-AGGYFAPHVRAYIRR 153 (386)
T ss_pred -CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccc-hHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999987542112111122233222211 234688999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCC-CCCHHHHhcCCCcccCCCc
Q 020887 206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRP-NTTIADLAKLKPAFKKDGT 284 (320)
Q Consensus 206 yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~-~~t~e~l~~~~~i~~~~gp 284 (320)
||+|+|++++|++++|+||++||+| ++ |+ ++|+|+|+++|+|++ |
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A-------------------~~------------r~~~~t~e~v~~s~~ia~---P 199 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYA-------------------HL------------HQPDITLEKVMASQMLWD---P 199 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHH-------------------hc------------CCCCCCHHHHhcCCcccC---C
Confidence 9999999999999999999998877 21 22 499999999999995 9
Q ss_pred ccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 285 lt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||++|||+++|||+|+||+|+|+|++++.+|.+||+
T Consensus 200 l~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~ 235 (386)
T PRK08313 200 IRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIH 235 (386)
T ss_pred CchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEE
Confidence 999999999999999999999999999989998873
No 45
>PRK08256 lipid-transfer protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=322.52 Aligned_cols=228 Identities=21% Similarity=0.283 Sum_probs=185.3
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
+|+|+|+++|||+|. + .+.+..+|+.+|+++||+|+||++++||.+++|+..+... ....+...+|+. ..|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~----~~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST----SGQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc----hhHHHHHHcCCC-CCC
Confidence 699999999999972 2 3578899999999999999999999999999988765432 122356678984 568
Q ss_pred eEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc--Cc---cChh------hhhhhccccCCCchHHH
Q 020887 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQ---VNPK------VEIFTQARDCLLPMGIT 198 (320)
Q Consensus 130 ~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~--~~---~~~~------~~~~~~~~~~~~~~g~~ 198 (320)
+++++++|+||+.+|..|+++|++|++|+||++|+|+++..++... .. +... +..+.....+...|++.
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA 152 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence 8999999999999999999999999999999999999986543110 10 1000 11100001112468999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCc
Q 020887 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278 (320)
Q Consensus 199 A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i 278 (320)
|++||++||+|||++++|+++||+||++||++ +| |.++|+|+|+++|||
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A-~~------------------------------~~~~t~e~~~~s~~i 201 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAANNPYA-QF------------------------------RDEYTLEDVLASPMI 201 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hc------------------------------CCCCCHHHHhcCCcc
Confidence 99999999999999999999999999999866 22 336999999999999
Q ss_pred ccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 279 ~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
++ |||++|||+++|||+|+||+|+|+|++++++|.++|+
T Consensus 202 ~~---Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~ 240 (391)
T PRK08256 202 WG---PLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIV 240 (391)
T ss_pred cC---CCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEE
Confidence 95 9999999999999999999999999999988888874
No 46
>PRK06059 lipid-transfer protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=321.81 Aligned_cols=231 Identities=17% Similarity=0.184 Sum_probs=188.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||+++|||+|. +.++.+|+.+|+++||+|+||++++||.+++++..+.....+..+..++..+|+. ..
T Consensus 4 ~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~ 76 (399)
T PRK06059 4 EPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GA 76 (399)
T ss_pred CcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CC
Confidence 5799999999999972 4577999999999999999999999999998876544322234567899999994 57
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccc--cCc-cChhhhhh-hccccCCCchHHHHHHHHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VGQ-VNPKVEIF-TQARDCLLPMGITSENVAQ 204 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~--~~~-~~~~~~~~-~~~~~~~~~~g~~A~~~~~ 204 (320)
+.++++++|+||+.+|.+|+++|++|.+|+|||+|+|+++...... ... .++.|..+ +........|++.+++||+
T Consensus 77 ~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~ 156 (399)
T PRK06059 77 PVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMD 156 (399)
T ss_pred ceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988521111 111 12233221 0111112468999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 020887 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (320)
Q Consensus 205 ~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gp 284 (320)
+||+|||+++.|++++|+||..||++ + +|+++|+|+|+++|||++ |
T Consensus 157 ~yg~s~e~~a~v~~~~~~~a~~Np~A-------------------~------------~r~~~t~e~v~~s~~i~~---P 202 (399)
T PRK06059 157 LYGATVEDFAQVKVKNARHGLLNPNA-------------------R------------YRKEVTVEDVLASPVVSD---P 202 (399)
T ss_pred HhCCCHHHHHHHHHHHHHHHccCcHh-------------------h------------cCCCCCHHHHhcCCcccC---C
Confidence 99999999999999999999988766 2 245799999999999995 9
Q ss_pred ccCCCCCCCCCcceEEEEcCHHHHHhc--CCCCcEEEC
Q 020887 285 TTAGNASQVSDGAGAVLLMKRSLAVQK--GLPILGVFR 320 (320)
Q Consensus 285 lt~~d~s~~sDGAaAvvLaSee~A~~~--~~~P~ari~ 320 (320)
+|++|||+++|||+|+||+|+++|+++ +.+|.++|+
T Consensus 203 l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~ 240 (399)
T PRK06059 203 LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVR 240 (399)
T ss_pred CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEE
Confidence 999999999999999999999999999 667777773
No 47
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=6.7e-40 Score=319.13 Aligned_cols=230 Identities=21% Similarity=0.271 Sum_probs=191.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCc-hhhHHHHHHHHcCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~-~~~~a~~va~~lGl~~~ 127 (320)
++|+|||+++|||++ +.+.+..+|+.+|+++||+|+||++++||.+++|+..+.... .+.++..++..+|++ .
T Consensus 2 ~~v~IvG~~~tp~~~-----~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~ 75 (389)
T PRK06064 2 RDVAIIGVGQTKFGE-----LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P 75 (389)
T ss_pred CcEEEEEccccccee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence 579999999999997 367889999999999999999999999999999876543321 245788899999995 6
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccccc-----CccChhhhhhhccccCCCchHHHHHHH
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVNPKVEIFTQARDCLLPMGITSENV 202 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~A~~~ 202 (320)
+|.++++++|+||+.+|..|+++|++|++|+|||+|.|+++..+.... ...++.|..+.. ......|++.+++|
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~al~a~~~ 154 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFG-ATFPGLYALIARRY 154 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccC-CchHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999887653111 011122222211 11123689999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCC
Q 020887 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (320)
Q Consensus 203 ~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~ 282 (320)
|++||+|||++++|++++|+||++||++ +| |+++|+|+|+++|++++
T Consensus 155 ~~~yG~s~e~~a~~a~~~~~~A~~np~a-~~------------------------------~~~~t~~~~~~s~~i~~-- 201 (389)
T PRK06064 155 MHKYGTTEEDLALVAVKNHYNGSKNPYA-QF------------------------------QKEITVEQVLNSPPVAD-- 201 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhhCcHh-hh------------------------------CCCCCHHHHhcCCcccC--
Confidence 9999999999999999999999999876 22 33689999999999995
Q ss_pred CcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 283 gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||++|||+++|||+|+||+|+++|++++.+|+ +|+
T Consensus 202 -Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~ 237 (389)
T PRK06064 202 -PLKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIK 237 (389)
T ss_pred -CCchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEE
Confidence 999999999999999999999999999987775 663
No 48
>PRK06158 thiolase; Provisional
Probab=100.00 E-value=1e-39 Score=317.40 Aligned_cols=223 Identities=19% Similarity=0.181 Sum_probs=181.6
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
++|+|||++.|||+|. .+.+..+|+.+|+++||+|+||+++|||.+++++.... .+...++..+|++ ..
T Consensus 8 ~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~-----~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 8 GRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDA-----LWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCC-----CcHHHHHHHcCCC-Ce
Confidence 7899999999999873 57889999999999999999999999999998864321 2234688899995 57
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEE-eecccccccccccCccChhhhhhhccccCCCchHHHHHHHHHHhC
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAA-GLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG 207 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~-G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~~yG 207 (320)
+.+.++.+|+++..++..|+++|++|.+|+|||+ |.|+++..........+..|..++....+...|++.+++||++||
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG 156 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYG 156 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHC
Confidence 8889999999999999999999999999999986 667665321111101112232222212233568999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccC
Q 020887 208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287 (320)
Q Consensus 208 itre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~ 287 (320)
+|+||+++|++++|+||.+||+| ++ |+++|+|+|+++|||.+ |||+
T Consensus 157 ~t~e~~a~vav~~~~~a~~NP~A-------------------~~------------~~~~t~e~vl~s~~ia~---Pl~~ 202 (384)
T PRK06158 157 TTREQLAEVAVAARQWAQLNPEA-------------------FM------------RDPLTIDDVLAARMVSD---PLSV 202 (384)
T ss_pred cCHHHHHHHHHHHHHHHhcCchh-------------------hh------------CCCCCHHHHhcCCccCC---CCch
Confidence 99999999999999999998776 22 34699999999999995 9999
Q ss_pred CCCCCCCCcceEEEEcCHHHHHhcCCCCc
Q 020887 288 GNASQVSDGAGAVLLMKRSLAVQKGLPIL 316 (320)
Q Consensus 288 ~d~s~~sDGAaAvvLaSee~A~~~~~~P~ 316 (320)
+|||+++|||+|+||+|+++|++++.+|+
T Consensus 203 ~d~~~~~DGAaAvVL~s~e~A~~l~~~~v 231 (384)
T PRK06158 203 RDCCLVTDGAGAVVMVRADRARDLPRPPV 231 (384)
T ss_pred hhcCCccCCeEEEEEecHHHHhhcCCCcE
Confidence 99999999999999999999999988774
No 49
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.6e-39 Score=317.92 Aligned_cols=240 Identities=16% Similarity=0.181 Sum_probs=184.8
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC--chhhHHHHHHHHcCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS--TRAMECRMAAFYAGFPE 126 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~--~~~~~a~~va~~lGl~~ 126 (320)
++|+|||+++|||+|+ +...+.+..+|+.+|+++||+|+||++++||.+++|+..+... +............++ .
T Consensus 3 ~~v~Ivg~~~t~~~r~--~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (403)
T PRK06289 3 DDVWVLGGYQSDFARN--WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPAL-W 79 (403)
T ss_pred CcEEEEeCCcCccccc--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcC-C
Confidence 4799999999999973 4446789999999999999999999999999999987644311 011111111223344 2
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccC-cc--Chhhhh--hhccccCCCchHHHHHH
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QV--NPKVEI--FTQARDCLLPMGITSEN 201 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~-~~--~~~~~~--~~~~~~~~~~~g~~A~~ 201 (320)
..|+++++++|+||..+|..|+.+|++|.+|+|||+|+|+++..+..... .+ ...+.. +..++.....|++.|++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999876542111 01 111110 10111112347899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccC
Q 020887 202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281 (320)
Q Consensus 202 ~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~ 281 (320)
||++||+|||++++|+++||+||++||+| +++..+ + .+++++|+++++|++.
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~NP~A-~~~~~~--------------------~-----~~~~~~~d~~~s~~i~-- 211 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARRNPNA-QTRGWA--------------------F-----PDEATNDDDATNPVVE-- 211 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHccCcHh-hcCccc--------------------c-----ccccchhhhhcCCccc--
Confidence 99999999999999999999999999988 333321 0 1258889999999887
Q ss_pred CCcccCCCCCCCCCcceEEEEcCHHHHHhcCC-CCcEEEC
Q 020887 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFR 320 (320)
Q Consensus 282 ~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~-~P~ari~ 320 (320)
+|||++|||+++|||+|+||+|+|+|++++. +|.+||+
T Consensus 212 -~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~ 250 (403)
T PRK06289 212 -GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIK 250 (403)
T ss_pred -CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEE
Confidence 5999999999999999999999999999987 7888874
No 50
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=100.00 E-value=5.1e-39 Score=316.62 Aligned_cols=248 Identities=20% Similarity=0.181 Sum_probs=191.2
Q ss_pred CceEEEecccccc-ccc---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCCCC--CCcEEEEeecCCCC-chhhH
Q 020887 49 DDVVIVAAYRTAI-CKA---K-------RGGFKDTLADDLLAPVLKAVIEKTRLNPSE--VGDIVVGTVLAPGS-TRAME 114 (320)
Q Consensus 49 ~~v~IvG~g~Tp~-~r~---~-------~g~~~~~s~~eLa~~A~~~AL~dAGl~~~d--ID~vi~g~~~~~~~-~~~~~ 114 (320)
++|||||++|||| +|. + .|.+.+.+..||+.+|+++||+|+||+++| ||.+++|+..+... .+.++
T Consensus 12 ~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~ 91 (438)
T PTZ00455 12 KRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHL 91 (438)
T ss_pred CceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccch
Confidence 5799999999999 872 1 466788999999999999999999999999 99999998765431 13577
Q ss_pred HHHHHHHcCCC------CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc---cChhhhh-
Q 020887 115 CRMAAFYAGFP------ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEI- 184 (320)
Q Consensus 115 a~~va~~lGl~------~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~---~~~~~~~- 184 (320)
++.++..+|++ ..+|+++|+++|+||+.||..|+++|++|.+|+|||+|+|+|+..+++.+.. ....+..
T Consensus 92 a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~ 171 (438)
T PTZ00455 92 GPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQ 171 (438)
T ss_pred HHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcccc
Confidence 88888777665 5789999999999999999999999999999999999999999887642211 0000100
Q ss_pred -hhccccCCCchHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCC
Q 020887 185 -FTQARDCLLPMGITSENVAQRFG-VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDG 262 (320)
Q Consensus 185 -~~~~~~~~~~~g~~A~~~~~~yG-itre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~ 262 (320)
..........+++. .+||++|| +|||++|+||+++|+|+..||.+.+.++.+ + +....|+.
T Consensus 172 ~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~---t-------------~~~~~d~~ 234 (438)
T PTZ00455 172 RKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKL---S-------------LEFCTGAS 234 (438)
T ss_pred ccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCC---C-------------ceeecccc
Confidence 00001001124444 38999997 999999999999999999998873222211 0 11234666
Q ss_pred CCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCC----cEEEC
Q 020887 263 IRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPI----LGVFR 320 (320)
Q Consensus 263 ~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P----~ari~ 320 (320)
+| ++ ++++++++.. |++++|||+++|||+|+||+|+++|++++++| .+||+
T Consensus 235 ~~---~~-e~l~s~~i~~---pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~ 289 (438)
T PTZ00455 235 DK---NP-KFLGNETYKP---FLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIK 289 (438)
T ss_pred cc---ch-hhhcCCcccC---cCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEE
Confidence 66 33 4567778874 99999999999999999999999999999988 67774
No 51
>PRK07855 lipid-transfer protein; Provisional
Probab=100.00 E-value=5e-39 Score=312.58 Aligned_cols=226 Identities=16% Similarity=0.093 Sum_probs=178.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
.+|+|||++.|+|+|+ .+.+..+|+.+|+++||+||||+++|||++++++. ... ....++..+|+....
T Consensus 4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~-----~~~~l~~~lGl~~~~ 72 (386)
T PRK07855 4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-DTN-----PEIAVARALGIGELK 72 (386)
T ss_pred CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-ccc-----cHHHHHHHCCCCCCc
Confidence 6899999999999983 56889999999999999999999999999886432 111 124578899995335
Q ss_pred CeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeec--cccccc-cc---c-----cCccChhhhhhhccccCCCchHH
Q 020887 129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE--SMTVNS-IS---V-----VGQVNPKVEIFTQARDCLLPMGI 197 (320)
Q Consensus 129 p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E--~~s~~~-~~---~-----~~~~~~~~~~~~~~~~~~~~~g~ 197 (320)
+..+++++|+++..++..|+++|++|.+|+|||+|+. ...... .. . ....++.|..+.....+...+++
T Consensus 73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al 152 (386)
T PRK07855 73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAM 152 (386)
T ss_pred ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHH
Confidence 6679999999999999999999999999999999983 221110 00 0 00112223322111112246899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCC
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~ 277 (320)
.+++||++||+|+||+++|++++|+||++||+| +++ |+++|+|+|+++|+
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A-------------------~~~-----------~~~~t~e~vl~s~~ 202 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAATNPKA-------------------WFY-----------GRPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHh-------------------hhc-----------CCCCCHHHHhcCCc
Confidence 999999999999999999999999999998877 211 13699999999999
Q ss_pred cccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 278 i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
|.+ |||++|||+++|||+|+||+|+|+|++++.+|+ +|
T Consensus 203 Ia~---Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I 240 (386)
T PRK07855 203 IAE---PLRLLDCCQESDGAVALVVTSAERARDLKQRPA-VI 240 (386)
T ss_pred ccC---CchhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EE
Confidence 995 999999999999999999999999999998886 65
No 52
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=309.66 Aligned_cols=225 Identities=18% Similarity=0.151 Sum_probs=180.8
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
..+|+|||++.|+|+|+ .+.+..+|+.+|+++||+||||+++|||+++++... . .. ....++..+|+. .
T Consensus 4 ~~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~-~---~~-~~~~~~~~lGl~-~ 72 (388)
T PRK08142 4 KGKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA-P---GL-GPASMVDYLGLK-L 72 (388)
T ss_pred CCCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-C---Cc-cHHHHHHhCCCC-C
Confidence 35799999999999983 578899999999999999999999999997652111 1 11 123478899994 5
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc------ccC-ccChhhhhhhccccCCCchHHHHH
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS------VVG-QVNPKVEIFTQARDCLLPMGITSE 200 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~------~~~-~~~~~~~~~~~~~~~~~~~g~~A~ 200 (320)
.+...++++|+|+..++..|+++|++|.+|+|||+|+|+++..... +.. ..+..|+.+... .+...+++.++
T Consensus 73 ~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~Al~a~ 151 (388)
T PRK08142 73 RHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGP-TTHNLYAMCAM 151 (388)
T ss_pred eeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhccccc-ccHHHHHHHHH
Confidence 7888999999999999999999999999999999999987532111 110 011223222221 12346889999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCccc
Q 020887 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280 (320)
Q Consensus 201 ~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~ 280 (320)
+||++||+|+||+++|++++|+||++||+| ++ |+++|+|+|+++|+|.+
T Consensus 152 ~ym~~yG~t~e~la~vav~~~~~A~~NP~A-------------------~~------------r~~~t~e~vl~s~~Ia~ 200 (388)
T PRK08142 152 RHMHEYGTTSEQLAWIKVAASHHAQHNPHA-------------------ML------------RDVVTVEDVLNSPMIAD 200 (388)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHhccCChh-------------------hc------------CCCCCHHHHhcCCcccC
Confidence 999999999999999999999999998776 22 34699999999999995
Q ss_pred CCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 281 ~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
|||++|||+++|||+|+||+|+|+|++++. |.++|
T Consensus 201 ---Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~-~~v~I 235 (388)
T PRK08142 201 ---PLHRLDCCVVTDGGGALVVVRPEIARSLKR-PLVKV 235 (388)
T ss_pred ---CchhhccCcccCceEEEEEecHHHHhhcCC-CCEEE
Confidence 999999999999999999999999999985 44665
No 53
>PRK07937 lipid-transfer protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=305.19 Aligned_cols=225 Identities=14% Similarity=0.109 Sum_probs=172.5
Q ss_pred CceEEEecccccccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchh-hHHHHHHHHcCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLA-DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA-MECRMAAFYAGFPE 126 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~-~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~-~~a~~va~~lGl~~ 126 (320)
++|+|+|++.|||+|+ ..+.+. .+|+.+|+++||+||||+++|||+++.+.. ....+. .........+|+..
T Consensus 2 ~~vaIvG~g~t~~~~~----~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~ 75 (352)
T PRK07937 2 RDVAVVGFAQAPHVRR----TDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVP 75 (352)
T ss_pred CcEEEEEeeccccccC----CCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCC
Confidence 7899999999999983 123554 899999999999999999999998854422 111111 11223446677733
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc--ccCccChhhhhhhccccCCCchHHHHHHHHH
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~A~~~~~ 204 (320)
..|...++ ++|..+|..|+++|++|.+|+|||+|+|+++..... .....++.+..+.. ..+...+++.+++||+
T Consensus 76 ~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G-~~~~~~~Al~a~~ym~ 151 (352)
T PRK07937 76 PINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLW-PDSVSMAGLQARAGLD 151 (352)
T ss_pred CCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCC-CchHHHHHHHHHHHHH
Confidence 45666665 468889999999999999999999999987632111 00111222221111 1123468999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 020887 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284 (320)
Q Consensus 205 ~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gp 284 (320)
+||+|+|++++|++++|+||++||+| ++ | +|+|+|+++|+|++ |
T Consensus 152 ~yG~t~e~lA~vavk~r~nA~~NP~A-------------------~~------------r--it~edvl~s~~ia~---P 195 (352)
T PRK07937 152 AGKWTEEQMAEVAARSRADARRNPSA-------------------EP------------S--ISVDELLARPYFAD---P 195 (352)
T ss_pred HhCCCHHHHHHHHHHHHHHHhhCchh-------------------hc------------c--CCHHHHhcCCcccC---C
Confidence 99999999999999999999998766 32 3 89999999999995 9
Q ss_pred ccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 285 lt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
||++|||+++|||+|+||+|+|+|++++.+| ++|+
T Consensus 196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~ 230 (352)
T PRK07937 196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWIT 230 (352)
T ss_pred chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEE
Confidence 9999999999999999999999999999888 7763
No 54
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=100.00 E-value=1.4e-38 Score=307.92 Aligned_cols=225 Identities=24% Similarity=0.262 Sum_probs=188.0
Q ss_pred EecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEe
Q 020887 54 VAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV 133 (320)
Q Consensus 54 vG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v 133 (320)
||++.|||+|. .+.++.+|+.+|+++||+|+||++++||.+++|+..+... .+.+++.++..+|++ ..+.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 58899999983 3789999999999999999999999999999988765432 356789999999996 7899999
Q ss_pred cCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccc--cC-ccChhhhh--hhccccCCCchHHHHHHHHHHhCC
Q 020887 134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VG-QVNPKVEI--FTQARDCLLPMGITSENVAQRFGV 208 (320)
Q Consensus 134 ~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~--~~-~~~~~~~~--~~~~~~~~~~~g~~A~~~~~~yGi 208 (320)
+++|+||..+|..|+++|++|.+|++|++|+|+++..+... .. ..+..+.. ......+...|++.+++||++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999998766311 00 11112211 111111235789999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccCC
Q 020887 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG 288 (320)
Q Consensus 209 tre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~~ 288 (320)
|+|++++|++++|+||++||++ +|+ .++|+|+++++|||++ |+|++
T Consensus 154 t~e~~~~va~~~~~~A~~np~A-~~~------------------------------~~~t~d~~~~~~~i~~---pl~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAARNPYA-QFR------------------------------KPITVEDVLNSRMIAD---PLRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhcCChh-hcC------------------------------CCCCHHHHhcCCcccC---CCchh
Confidence 9999999999999999999877 332 2689999999999994 99999
Q ss_pred CCCCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 289 d~s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
|||+++|||+|+||+|+++|+++ .+|.++|+
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~ 230 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWIL 230 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEE
Confidence 99999999999999999999999 66777763
No 55
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=100.00 E-value=1.8e-38 Score=309.13 Aligned_cols=230 Identities=20% Similarity=0.202 Sum_probs=178.7
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC-chhhHHHHHHHHcCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-TRAMECRMAAFYAGFPE 126 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~-~~~~~a~~va~~lGl~~ 126 (320)
|++|+|||+++|||+| +.+.+..+|+.+|+++||+|+||++++||.+++|+..+... .....+..+...+|+ .
T Consensus 1 ~~~v~Ivg~g~tpfgr-----~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl-~ 74 (389)
T PRK07516 1 MMTASIVGWAHTPFGK-----LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL-R 74 (389)
T ss_pred CCcEEEEeCCcceeee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC-C
Confidence 3579999999999998 36788999999999999999999999999999998754321 111122223345677 3
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCc-c-Chhhhhh--hccccCCCchHHHHHHH
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-V-NPKVEIF--TQARDCLLPMGITSENV 202 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~g~~A~~~ 202 (320)
..|+++++++|+||..+|..|+++|++|++|+||++|+|+++..+...... . ...+... ..+..+...|++.|++|
T Consensus 75 ~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y 154 (389)
T PRK07516 75 FKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAY 154 (389)
T ss_pred CCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999998776432110 0 0011000 00111123689999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHH----HhcCCCc
Q 020887 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIAD----LAKLKPA 278 (320)
Q Consensus 203 ~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~----l~~~~~i 278 (320)
|++||+|||++++|+++||+||++||.+ +|+ +++|+|+ +.++|++
T Consensus 155 ~~~yg~~~e~~a~vav~~~~~A~~nP~A-~~~------------------------------~~~t~~~~~~~~~~~~~i 203 (389)
T PRK07516 155 FQRYGDQSDALAMIAAKNHANGVANPYA-QMR------------------------------KDLGFEFCRTVSEKNPLV 203 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHhhhcCChh-hcC------------------------------CcccHHhhhhhhhcCCcc
Confidence 9999999999999999999999998876 222 2356654 6778888
Q ss_pred ccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 279 ~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
. +|||++|||+++|||+|+||+|+++|++++ +| ++|
T Consensus 204 ~---~pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i 239 (389)
T PRK07516 204 A---GPLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRF 239 (389)
T ss_pred c---CCCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEE
Confidence 7 499999999999999999999999999984 33 455
No 56
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=100.00 E-value=1.5e-36 Score=295.96 Aligned_cols=226 Identities=27% Similarity=0.331 Sum_probs=174.5
Q ss_pred EecccccccccCC---CCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHH-HHHHcCCCCCCC
Q 020887 54 VAAYRTAICKAKR---GGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPETVP 129 (320)
Q Consensus 54 vG~g~Tp~~r~~~---g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~-va~~lGl~~~~p 129 (320)
+|+++|||+| +. |.+....+.+|+.+|+++||+++||++++||.+++|+..+.+. +..+++. +...+|+ ...|
T Consensus 1 ~g~~~Tpfg~-~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p 77 (393)
T cd00826 1 AGAAMTAFGK-FGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAP 77 (393)
T ss_pred CccccCCCcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCc
Confidence 5889999998 44 6667788999999999999999999999999999998876653 4566664 4566676 4789
Q ss_pred eEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCccC-hhhhhhhccc---cCCCchHHHHHHHHHH
Q 020887 130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN-PKVEIFTQAR---DCLLPMGITSENVAQR 205 (320)
Q Consensus 130 ~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~~-~~~~~~~~~~---~~~~~~g~~A~~~~~~ 205 (320)
+++|+++|+||+.++..|+.+|++|.+|++|++|+|+|+..+........ ..+......+ +....+++.+.+||++
T Consensus 78 ~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~ 157 (393)
T cd00826 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEK 157 (393)
T ss_pred EEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876531110000 0011111100 1123456667777777
Q ss_pred hCCCHHHHHHHHHHH---HHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCC
Q 020887 206 FGVTRQEQDLAAVES---HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282 (320)
Q Consensus 206 yGitre~la~vAv~s---~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~ 282 (320)
||+++|+++.|++++ |+|+.+|| +++. |+++|+|+|+++||++.++
T Consensus 158 ~G~~~e~~a~v~~~~~~~~~~a~~np-------------------~a~~------------~~~~t~e~~~~~~~i~~~~ 206 (393)
T cd00826 158 DGRFKDEFAKFGVKGRKGDIHSDADE-------------------YIQF------------GDEASLDEIAKLRPAFDKE 206 (393)
T ss_pred cCCCHHHEEEEEEecCCCCEEEecCC-------------------CCCC------------CCCCCHHHHhcCCCccCCC
Confidence 777777777777776 55555544 3332 3469999999999998556
Q ss_pred CcccCCCCCCCCCcceEEEEcCHHHHHhcCC
Q 020887 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313 (320)
Q Consensus 283 gplt~~d~s~~sDGAaAvvLaSee~A~~~~~ 313 (320)
+|||++|||+++|||+|+||+|+++|+++++
T Consensus 207 ~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l 237 (393)
T cd00826 207 DFLTAGNACGLNDGAAAAILMSEAEAQKHGL 237 (393)
T ss_pred CCEechhcCCcCCCeEEEEEecHHHHHHcCC
Confidence 7999999999999999999999999999986
No 57
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=100.00 E-value=1e-32 Score=275.94 Aligned_cols=226 Identities=15% Similarity=0.053 Sum_probs=175.5
Q ss_pred CCCceEEEecccccccccCCCCCCC--CCHHHHHHHHHHHHHHHcCCC--CCCCCcEEEEeecCCCCchhhHHHHHHHHc
Q 020887 47 FDDDVVIVAAYRTAICKAKRGGFKD--TLADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGSTRAMECRMAAFYA 122 (320)
Q Consensus 47 ~~~~v~IvG~g~Tp~~r~~~g~~~~--~s~~eLa~~A~~~AL~dAGl~--~~dID~vi~g~~~~~~~~~~~~a~~va~~l 122 (320)
+.+.++|||+|+|+|++. ..+ .++.+|+.+|+++||+|+|++ +++||.+++++.... . ..+.+..++..+
T Consensus 2 ~~~~~~IVGvG~t~~~~~----~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~-~~~~~~~la~~l 75 (498)
T PRK08257 2 DPRTPVIVGVGQVTERPD----DPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-R-YRDPPGLLAERL 75 (498)
T ss_pred CCCcEEEEEeeecccccC----CcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-c-ccCHHHHHHHHc
Confidence 568899999999999873 123 488999999999999999999 999999988765432 1 334567889999
Q ss_pred CCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccccc--------ccCc--------------cCh
Q 020887 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--------VVGQ--------------VNP 180 (320)
Q Consensus 123 Gl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~--------~~~~--------------~~~ 180 (320)
|+. ..+......+|.++..++..|+++|++|++|+|||+|+|+++..+.. |... +..
T Consensus 76 Gl~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 76 GAD-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred CCC-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 994 34555566778888899999999999999999999999998654211 0000 001
Q ss_pred hhhhhhccccCCCchHHHHHHHHHHhCCCHHH-HH---HHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEE
Q 020887 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQE-QD---LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~g~~A~~~~~~yGitre~-la---~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~ 256 (320)
.+........+...|++.+++||++||+|+|| ++ .+++++|+||++||+| +|
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A-~~----------------------- 210 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHA-WI----------------------- 210 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHH-hh-----------------------
Confidence 12211111112346899999999999999998 34 4445899999999887 22
Q ss_pred EeccCCCCCCCCHHHHh----cCCCcccCCCcccCCCCCC-CCCcceEEEEcCHHHHHhcCC
Q 020887 257 ISVDDGIRPNTTIADLA----KLKPAFKKDGTTTAGNASQ-VSDGAGAVLLMKRSLAVQKGL 313 (320)
Q Consensus 257 ~~~De~~r~~~t~e~l~----~~~~i~~~~gplt~~d~s~-~sDGAaAvvLaSee~A~~~~~ 313 (320)
|+++|+|+|+ ++|+|.+ |+|++|||+ ++|||+|+||+|+++||+++.
T Consensus 211 -------r~~~t~eevl~~~~~~rmIa~---Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~ 262 (498)
T PRK08257 211 -------PRERSAEEIVTPTPDNRMIAW---PYTKLMNANDMVDQGAAVLLTSVAKARRLGV 262 (498)
T ss_pred -------CCCCCHHHHhcccCCCCeeeC---CccHhhcCCCCcccceEEEEeeHHHHHhcCC
Confidence 3368999999 7899985 999999996 999999999999999999984
No 58
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.97 E-value=2.5e-32 Score=247.81 Aligned_cols=264 Identities=34% Similarity=0.461 Sum_probs=226.0
Q ss_pred CCCCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcC
Q 020887 44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (320)
Q Consensus 44 ~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lG 123 (320)
+...+..+++|.+.||||--. +..+++.-+.+|+.++....|++..++.+.+|.||+|++.+.-- .+++++..+...|
T Consensus 37 k~kn~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~ag 114 (465)
T KOG1392|consen 37 KKKNMPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAG 114 (465)
T ss_pred cccCCCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcC
Confidence 356778899999999999652 34478888999999999999999999999999999999887653 6789999999999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccccCcc-------C------------hhhhh
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------N------------PKVEI 184 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~~~~~-------~------------~~~~~ 184 (320)
++.+.|+.+|..+|-|+.+|+..+..+|++|.+|+++++|+|-||..|++....+ + ..+..
T Consensus 115 fsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~ 194 (465)
T KOG1392|consen 115 FSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRK 194 (465)
T ss_pred CCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhh
Confidence 9999999999999999999999999999999999999999999999998643211 0 01110
Q ss_pred -hhc---c----ccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEE
Q 020887 185 -FTQ---A----RDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256 (320)
Q Consensus 185 -~~~---~----~~~~~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~ 256 (320)
+.. + +.+.-.||-.+++++..|+++|.++|+||.+||..|.++.+.|+|-+ +||+++++++| .
T Consensus 195 nflapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~--------~ 265 (465)
T KOG1392|consen 195 NFLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDP--------K 265 (465)
T ss_pred hccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCc--------c
Confidence 100 0 11223688899999999999999999999999999999999999988 67999886654 3
Q ss_pred EeccCCCCCCCCHHHHhcCCCcccC-CCcccCCCCCCCCCcceEEEEcCHHHHHhcCCCCcEEE
Q 020887 257 ISVDDGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319 (320)
Q Consensus 257 ~~~De~~r~~~t~e~l~~~~~i~~~-~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~P~ari 319 (320)
..+|++|| ..|+|++.+++|.|-| .|++|+.|.|-++|||.|.|+++||+|..+|.+|-+.+
T Consensus 266 t~kdngir-vssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkayl 328 (465)
T KOG1392|consen 266 TIKDNGIR-VSSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYL 328 (465)
T ss_pred eecCCCcc-cCCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHh
Confidence 44899999 4999999999999874 58999999999999999999999999999999998754
No 59
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=99.97 E-value=8.9e-31 Score=235.35 Aligned_cols=230 Identities=21% Similarity=0.280 Sum_probs=187.5
Q ss_pred CCCCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcC
Q 020887 44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123 (320)
Q Consensus 44 ~~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lG 123 (320)
|..++-+|||||+|.|+|.+. |...+.+..+|+.+|...||.|++|..++|+.-++|..+++.. .+...-...|
T Consensus 1 ms~t~~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst----cgqraiyevg 74 (408)
T KOG1406|consen 1 MTKTKPRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST----CGQRAIYEVG 74 (408)
T ss_pred CCCCCceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc----cchHHHHhcc
Confidence 344556899999999999874 6677888999999999999999999999999888888876543 3334445778
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccccc---cCc--cChhhhh------hhccccCC
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV---VGQ--VNPKVEI------FTQARDCL 192 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~~~---~~~--~~~~~~~------~~~~~~~~ 192 (320)
+ ..+|.+.|++.|++|..++-.|-+.|.+|.+|+||+.|+|+|.+..... ++. .+....- +...+-..
T Consensus 75 m-tgipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaa 153 (408)
T KOG1406|consen 75 M-TGIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAA 153 (408)
T ss_pred c-cCcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchH
Confidence 8 4789999999999999999999999999999999999999998765421 111 1111110 10011123
Q ss_pred CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeecccCCCCCccceEEEeccCCCCCCCCHHHH
Q 020887 193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272 (320)
Q Consensus 193 ~~~g~~A~~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~~~~p~a~~~~~~~~~~De~~r~~~t~e~l 272 (320)
+.||..+..+|++||..+|.++.++-+||++..+||.. +. |...|+|++
T Consensus 154 qmfgnagkehmekygtk~ehfakiawknhkhsvnnpys-------------------qf------------~deysldqv 202 (408)
T KOG1406|consen 154 QMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYS-------------------QF------------RDEYSLDQV 202 (408)
T ss_pred HHhhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhH-------------------hh------------hhhccHHHH
Confidence 56788899999999999999999999999999987655 32 235899999
Q ss_pred hcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHHHHhcCCC
Q 020887 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLP 314 (320)
Q Consensus 273 ~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~A~~~~~~ 314 (320)
+++|-+++ -||.+.|||.+|||+|.||+||..+++++++
T Consensus 203 m~s~~v~d---flt~lqccptsdgaaaailaseafv~k~gl~ 241 (408)
T KOG1406|consen 203 MKSPQVVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLE 241 (408)
T ss_pred hcchHHHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccH
Confidence 99999996 9999999999999999999999999999875
No 60
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.52 E-value=7.5e-14 Score=132.23 Aligned_cols=103 Identities=23% Similarity=0.214 Sum_probs=87.8
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----CCCCCcEEEEeecCCCC----------------
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN----PSEVGDIVVGTVLAPGS---------------- 109 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~----~~dID~vi~g~~~~~~~---------------- 109 (320)
+++|+|.+.+ ..+|+.+|+++||+++|++ +++||++++++..+...
T Consensus 1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (332)
T cd00825 1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV 66 (332)
T ss_pred CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence 4678886665 5799999999999999999 89999999987654321
Q ss_pred ----chhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 110 ----TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 110 ----~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
..+..+..++..+|+ ++|+++++.+|+|+..+|..|.++|++|++|.+||+|+|.++
T Consensus 67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~ 127 (332)
T cd00825 67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELA 127 (332)
T ss_pred hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Confidence 023457789999999 689999999999999999999999999999999999999754
No 61
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.52 E-value=1.6e-13 Score=125.02 Aligned_cols=93 Identities=26% Similarity=0.353 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I 151 (320)
.+..+|+.+|+++||+++|++++|||.+++++..+... .+..+..++..+|++ .+++++++++|+++..+|..|+++|
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999998876542 466788899999996 7899999999999999999999999
Q ss_pred HhCCCCEEEEEeecc
Q 020887 152 KAGLYDIGIAAGLES 166 (320)
Q Consensus 152 ~sG~advvLv~G~E~ 166 (320)
++|++|.+||+++|.
T Consensus 83 ~~g~~~~~lv~~~e~ 97 (254)
T cd00327 83 QNGKADIVLAGGSEE 97 (254)
T ss_pred HCCCCCEEEEEecce
Confidence 999999999999987
No 62
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.51 E-value=7.5e-14 Score=132.20 Aligned_cols=120 Identities=21% Similarity=0.243 Sum_probs=107.0
Q ss_pred CCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887 46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (320)
Q Consensus 46 ~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~ 125 (320)
++..+.||.. +|++.++ +-+..+.+..+|+++|+++||++||++++|||.||+++..+... .|..+..++..||+.
T Consensus 27 ~~tsdewI~~--rtGir~R-~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~ 102 (323)
T COG0332 27 VDTSDEWIET--RTGIRER-RIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG 102 (323)
T ss_pred cCCCcceeee--ecCCcee-eecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC
Confidence 6778899996 8888764 33345788999999999999999999999999999998887765 578899999999995
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccc
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~ 170 (320)
..++|+++.+|++.+.+|..|..+|++|.++.+||+|.|.+|+.
T Consensus 103 -~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ 146 (323)
T COG0332 103 -GAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI 146 (323)
T ss_pred -CcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc
Confidence 68999999999999999999999999999999999999999764
No 63
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.45 E-value=3.9e-13 Score=131.84 Aligned_cols=93 Identities=20% Similarity=0.272 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC-------------------------chhhHHHHHHHHcCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~lGl 124 (320)
..+|+.+++++||+|||++++++| ++++|+..+... .....+..++..+|+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 568999999999999999999988 466665432210 012245678899998
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
.+|.++++++|+||+.||..|+++|++|++|++||+|+|.+.
T Consensus 152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~ 193 (411)
T PRK07314 152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAI 193 (411)
T ss_pred --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccC
Confidence 689999999999999999999999999999999999998654
No 64
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.44 E-value=3.8e-13 Score=131.45 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeecCCCC-------------------------chhhHHHHHHHHcCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~lGl 124 (320)
..+|+.+++++||+|+|++++++|. +++|+..+... ....++..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4789999999999999999999986 55554322110 001245568888998
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
.+|.++++++|+||+.||..|+++|++|++|++||+|+|.+.
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~ 192 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAI 192 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcC
Confidence 689999999999999999999999999999999999999643
No 65
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.35 E-value=3.6e-12 Score=120.61 Aligned_cols=109 Identities=20% Similarity=0.265 Sum_probs=93.4
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCC
Q 020887 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (320)
Q Consensus 58 ~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aC 137 (320)
+|++.++ +...++.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|+ ...++++++++|
T Consensus 37 ~~gi~~r-~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~-~~~~~~~v~~~C 113 (319)
T PRK09352 37 RTGIKER-RIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGA-KNAAAFDLSAAC 113 (319)
T ss_pred hcCeEEE-EeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCC-CCCcEeeccccc
Confidence 6777653 34456789999999999999999999999999999987755432 34566788999999 467999999999
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEEEeeccccc
Q 020887 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 138 aSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~ 169 (320)
++|+.+|..|++.|++|.+|++||+|+|.++.
T Consensus 114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~ 145 (319)
T PRK09352 114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSR 145 (319)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence 99999999999999999999999999999764
No 66
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.35 E-value=6.6e-12 Score=123.41 Aligned_cols=92 Identities=22% Similarity=0.407 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC------------------chhhHHHHHHHHcCCCCCCCeE
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLR 131 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~------------------~~~~~a~~va~~lGl~~~~p~~ 131 (320)
...|+.+|+++||+|||+++++|| ++++|+..+... ..+..+..++..+|+ .+|++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 457999999999999999999998 788886543211 012356678899998 57999
Q ss_pred EecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 132 ~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+++.+|+||..||..|+++|++|++|++||+|+|.+
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~ 200 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLI 200 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeec
Confidence 999999999999999999999999999999999864
No 67
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.35 E-value=4.3e-12 Score=120.85 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=96.1
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
.+|. .+|++.++ +...++.+..+|+.+|+++||+++|+++++||.+++++..+... ...+..+...+|+. ..++
T Consensus 31 ~~i~--~~~gi~~r-~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~ 104 (326)
T CHL00203 31 HWIS--TRTGIKKR-HLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVA 104 (326)
T ss_pred hhEe--eccCeEEE-EeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCce
Confidence 4565 58888773 45567889999999999999999999999999999987655432 22355678889985 6789
Q ss_pred EEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccc
Q 020887 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 131 ~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~ 170 (320)
++++++|++|+.++..|++.|++|.++.+|++|+|.++..
T Consensus 105 ~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~ 144 (326)
T CHL00203 105 FDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKW 144 (326)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc
Confidence 9999999999999999999999999999999999998753
No 68
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.34 E-value=8e-12 Score=123.86 Aligned_cols=92 Identities=21% Similarity=0.269 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCcEEEEeecCCCCc-------------------------hhhHHHHHHHHcC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPS-----EVGDIVVGTVLAPGST-------------------------RAMECRMAAFYAG 123 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~-----dID~vi~g~~~~~~~~-------------------------~~~~a~~va~~lG 123 (320)
...|+..|+++||+|||+++. +..++++|+..+.... ...++..++..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 568999999999999998642 3457888875433210 0124567888999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+ .+|+++++++|+||+.||..|+++|++|++|++||+|+|.+
T Consensus 173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~ 214 (437)
T PLN02836 173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESS 214 (437)
T ss_pred C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence 8 69999999999999999999999999999999999999863
No 69
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.32 E-value=6.1e-12 Score=123.97 Aligned_cols=92 Identities=21% Similarity=0.355 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCC-C----cEEEEeecCCCC-------------------------chhhHHHHHHHHcC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dI-D----~vi~g~~~~~~~-------------------------~~~~~a~~va~~lG 123 (320)
...|+..++++||+|+|++++++ + ++++|+..+... .....+..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 46788999999999999988776 4 566766533210 00123556888999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+ .+|+++++++|+||+.||..|+++|++|++|++||+|+|.+
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~ 203 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAA 203 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 9 69999999999999999999999999999999999999974
No 70
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.31 E-value=8.1e-12 Score=118.13 Aligned_cols=110 Identities=12% Similarity=0.202 Sum_probs=95.7
Q ss_pred EecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEe
Q 020887 54 VAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV 133 (320)
Q Consensus 54 vG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v 133 (320)
+|+.+..|.. .+.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|++ ..+++++
T Consensus 34 ~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~~v 105 (324)
T cd00827 34 TGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAFDL 105 (324)
T ss_pred eecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCceeeh
Confidence 5666666653 3678899999999999999999999999999987765432 456788899999996 7899999
Q ss_pred cCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccccc
Q 020887 134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171 (320)
Q Consensus 134 ~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~ 171 (320)
+++|+|++.++..|++.|++|.++.+|++++|.++..+
T Consensus 106 ~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~ 143 (324)
T cd00827 106 KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL 143 (324)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc
Confidence 99999999999999999999999999999999988665
No 71
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.29 E-value=1.2e-11 Score=121.03 Aligned_cols=95 Identities=18% Similarity=0.193 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCC-CC----cEEEEeecCCCC---------------------ch--hhHHHHHHHHcCC
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAPGS---------------------TR--AMECRMAAFYAGF 124 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~d-ID----~vi~g~~~~~~~---------------------~~--~~~a~~va~~lGl 124 (320)
....|+.+++++||+|||+++++ ++ ++++|+..+... .. +.++..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46789999999999999998877 66 456665433210 01 3466778889998
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
. .+|+++++++|+||+.||..|+++|++|++|++||+|+|.++
T Consensus 151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 193 (407)
T cd00828 151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL 193 (407)
T ss_pred C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence 3 689999999999999999999999999999999999999865
No 72
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.29 E-value=1.2e-11 Score=117.10 Aligned_cols=108 Identities=20% Similarity=0.287 Sum_probs=91.8
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCC
Q 020887 58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137 (320)
Q Consensus 58 ~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aC 137 (320)
++++.++ +....+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ ..++++++.+|
T Consensus 36 ~~gi~~r-~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C 112 (318)
T TIGR00747 36 RTGIKER-RIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAAC 112 (318)
T ss_pred ccCceEE-EECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhh
Confidence 4555442 33446788999999999999999999999999999987765432 355678899999995 57899999999
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 138 SSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 138 aSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
++|..+|..|+.+|++|.++.+|++++|.++
T Consensus 113 ~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~ 143 (318)
T TIGR00747 113 AGFIYALSVAKQYIESGKYKTVLVVGAEKLS 143 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence 9999999999999999999999999999875
No 73
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.29 E-value=1.5e-11 Score=121.36 Aligned_cols=94 Identities=20% Similarity=0.299 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-CCCCCcEEEEeecCCCCc-----------------------------hhhHHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLN-PSEVGDIVVGTVLAPGST-----------------------------RAMECRMAAFY 121 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~-~~dID~vi~g~~~~~~~~-----------------------------~~~~a~~va~~ 121 (320)
....+|+..++++||+|+|++ +++++...+|...+.... ...++..++..
T Consensus 75 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 75 SRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 446899999999999999998 777775444443322110 01245667888
Q ss_pred cCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 122 lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+|+ ++|++++.++|+||+.||.+|+++|++|++|++||+|+|.+
T Consensus 155 ~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~ 198 (421)
T PTZ00050 155 HKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEAS 198 (421)
T ss_pred hCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECccccc
Confidence 998 68999999999999999999999999999999999999974
No 74
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.27 E-value=1.7e-11 Score=117.10 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=88.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++...++++++++|+++..+|..|..
T Consensus 57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~ 135 (338)
T PRK09258 57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAAN 135 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHH
Confidence 3678999999999999999999999999999988765443 466788899999996567899999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
.|++|.++.+||+++|..+.
T Consensus 136 ~i~~g~~~~~Lvv~~e~~s~ 155 (338)
T PRK09258 136 MIELGQIDYALVVSGESARE 155 (338)
T ss_pred HHHcCCCCEEEEEEecccch
Confidence 99999999999999998654
No 75
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.25 E-value=2.5e-11 Score=116.74 Aligned_cols=99 Identities=14% Similarity=0.305 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++...++++++.+|+++..+|..|..
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~ 124 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG 124 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999887655432 344567888999995467899999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
+|++|.++.+||+++|.++.
T Consensus 125 ~i~sg~~~~vLVv~~d~~~~ 144 (345)
T TIGR00748 125 LVASGMIKYGLAIGADTAQG 144 (345)
T ss_pred HHHcCCCCEEEEEEEeeccc
Confidence 99999999999999998853
No 76
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=5.2e-11 Score=117.30 Aligned_cols=92 Identities=17% Similarity=0.226 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC-----------c--------------hhhHHHHHHHHcCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGF 124 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~-----------~--------------~~~~a~~va~~lGl 124 (320)
...++..++++||+|||+++++.+ ++++|+..+... . ...++..++..+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 457888999999999999765544 577777543221 0 01367788899999
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
++|+++++++|+|++.||..|+++|++|++|++||+|+|..
T Consensus 154 --~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~ 194 (414)
T PRK08722 154 --RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKA 194 (414)
T ss_pred --CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence 69999999999999999999999999999999999999864
No 77
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.22 E-value=5.9e-11 Score=115.56 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=92.3
Q ss_pred ccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCC
Q 020887 57 YRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 136 (320)
Q Consensus 57 g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~a 136 (320)
.+|++.++ +....+.+..+|+.+|+++||+++|++++|||.+|+++..+... ...+..++..+|++ ..++++++.+
T Consensus 80 ~~tGi~~R-~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~ 155 (379)
T PLN02326 80 TRTGIRNR-RVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAA 155 (379)
T ss_pred cccCcceE-eecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeecccc
Confidence 36777653 33346788999999999999999999999999999987654332 23466788999995 7889999999
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEEEeeccccc
Q 020887 137 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 137 CaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~ 169 (320)
|++++.+|..|.+.|++|.++.+|++|+|.++.
T Consensus 156 Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~ 188 (379)
T PLN02326 156 CSGFVLGLVTAARFIRGGGYKNVLVIGADALSR 188 (379)
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence 999999999999999999999999999999765
No 78
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.22 E-value=6.1e-11 Score=112.47 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=87.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ ..++++++.+|+++..+|..|..
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~ 126 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG 126 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence 4678999999999999999999999999999887654433 456778899999995 57899999999999999999999
Q ss_pred HHHhCCCCEEEEEeecccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~~ 170 (320)
+|++|.++.+|++++|.++..
T Consensus 127 ~l~~g~~~~~Lvv~~e~~s~~ 147 (325)
T PRK12879 127 LITSGLYKKVLVIGAERLSKV 147 (325)
T ss_pred HHHcCCCCEEEEEEehhhcCc
Confidence 999999999999999987643
No 79
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.22 E-value=6.2e-11 Score=115.61 Aligned_cols=94 Identities=26% Similarity=0.393 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeecCCCC-------------------------chhhHHHHHHHHcC
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAG 123 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~lG 123 (320)
...+|+.+++++||+|+|++++++|. +++|+..+... ..+.++..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46789999999999999999988875 55555433210 01235678899999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
+ .+|.++++.+|+|++.||..|+++|++|++|++||+|+|.++
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~ 192 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALI 192 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCccccc
Confidence 8 589999999999999999999999999999999999998654
No 80
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.21 E-value=6.2e-11 Score=111.92 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ ..++++++.+|+++..+|..|..
T Consensus 46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 4578999999999999999999999999999887665432 356778899999996 78999999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
+|++|.++.+|++++|.++.
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~ 143 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSR 143 (320)
T ss_pred HHHcCCCCEEEEEEehhhcc
Confidence 99999999999999999764
No 81
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.21 E-value=1.9e-10 Score=112.67 Aligned_cols=92 Identities=22% Similarity=0.376 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeecCCCC------------------chhhHHHHHHHHcCCCCCCCeE
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLR 131 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~----vi~g~~~~~~~------------------~~~~~a~~va~~lGl~~~~p~~ 131 (320)
..+|+.+|+++||+|||++++++|. +++|+..+... ..+..+..++..+|+ .+|.+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCce
Confidence 5799999999999999999888874 66665432110 013356678899998 57999
Q ss_pred EecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 132 ~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+++++|+|+..||..|+++|++|++|++||+|+|.+
T Consensus 165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~ 200 (421)
T cd00833 165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLI 200 (421)
T ss_pred eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeecc
Confidence 999999999999999999999999999999999964
No 82
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.21 E-value=6.9e-11 Score=115.04 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I 151 (320)
.+..+|+.+|+++||+++|++++|||.+|+++..+... .+..+..+...+|++ ..++++++.+|+|++.+|..|...|
T Consensus 61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i 138 (378)
T PRK06816 61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSV 138 (378)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999988765432 234456778889995 5789999999999999999999999
Q ss_pred HhCCCCEEEEEeeccccc
Q 020887 152 KAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 152 ~sG~advvLv~G~E~~s~ 169 (320)
++|.++.+|++|+|.+|.
T Consensus 139 ~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 139 KAGESRNAVATASELASR 156 (378)
T ss_pred HCCCCCEEEEEeEccchh
Confidence 999999999999999864
No 83
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.21 E-value=1.5e-10 Score=111.18 Aligned_cols=91 Identities=13% Similarity=0.215 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCCCcEEEEeecCCCC-----------c--------------hhhHHHHHHHHcCCCC
Q 020887 74 ADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE 126 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~--~~dID~vi~g~~~~~~~-----------~--------------~~~~a~~va~~lGl~~ 126 (320)
..+++..++++||+|||+. ++.+ ++++|+..+... . ...++..++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4678999999999999975 2222 577777544421 0 01356778899999
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
++|++++.++|+||+.||..|+++|++|++|++||+|+|..
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~ 121 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAV 121 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence 69999999999999999999999999999999999998864
No 84
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.19 E-value=9.6e-11 Score=110.31 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHH
Q 020887 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (320)
Q Consensus 69 ~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~ 148 (320)
.++.+..+|+.+|+++||+++||+++|||.+++|... . ....+..++..+|+ |.+.++++|+|+..+|..|+
T Consensus 45 s~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~-~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa 116 (327)
T TIGR02845 45 SWEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLL-N---QIITANFVARDLGI----PFLGLYGACSTSMETLALGA 116 (327)
T ss_pred CcchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCC-C---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHH
Confidence 3567888999999999999999999999999988632 1 23467788889997 56999999999999999999
Q ss_pred HHHHhCCCCEEEEEeecccc
Q 020887 149 TAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 149 ~~I~sG~advvLv~G~E~~s 168 (320)
.+|++|.+|.|||++.|..+
T Consensus 117 ~lI~SG~ad~VLVV~Ssh~S 136 (327)
T TIGR02845 117 MLVDGGFADRVLAATSSHYA 136 (327)
T ss_pred HHHhCCCCCEEEEEEecccc
Confidence 99999999999999976665
No 85
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.18 E-value=9.6e-11 Score=111.56 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC-CCCeEEecCCCCcHHHHHHHHHH
Q 020887 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE-TVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 71 ~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~-~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
+.+..+|+.+|+++||+++|++++|||.+++++..+... .+..+..++..+|++. ..++++++.+|+++..+|..|..
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~ 127 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY 127 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence 578899999999999999999999999999887654432 3566888999999953 36899999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
+|++|.++.+|++++|.++.
T Consensus 128 ~l~~g~~~~~Lvv~~e~~s~ 147 (329)
T PRK07204 128 AIECGRYKRVLIISSEISSV 147 (329)
T ss_pred HHHCCCCCEEEEEEeccccC
Confidence 99999999999999998753
No 86
>PRK04262 hypothetical protein; Provisional
Probab=99.18 E-value=7.9e-11 Score=113.28 Aligned_cols=97 Identities=16% Similarity=0.321 Sum_probs=84.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|++++|||.+++++..+... .+..+..++..+|++...++++++.+|+++..+|..|..
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~ 125 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999887655432 345566888999996457889999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccc
Q 020887 150 AIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~ 167 (320)
.|++|.++.+|++++|..
T Consensus 126 ~i~sg~~~~aLVv~~e~~ 143 (347)
T PRK04262 126 LVKSGMIKYALAIGADTA 143 (347)
T ss_pred HHHcCCCCEEEEEEEeee
Confidence 999999999999999974
No 87
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.15 E-value=1.3e-10 Score=112.87 Aligned_cols=94 Identities=12% Similarity=0.105 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHH
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|+. .++++++.+|++|+.+|..|+++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999887654332 344567788999983 6899999999999999999999999
Q ss_pred hCCCCEEEEEeeccccc
Q 020887 153 AGLYDIGIAAGLESMTV 169 (320)
Q Consensus 153 sG~advvLv~G~E~~s~ 169 (320)
+|.+|.+||+|+|.++.
T Consensus 171 ~g~~~~vLvv~~e~~s~ 187 (372)
T PRK07515 171 SGSARRVLVVNPEICSG 187 (372)
T ss_pred cCCCCEEEEEeeecccc
Confidence 99999999999999773
No 88
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.14 E-value=1.6e-10 Score=111.59 Aligned_cols=98 Identities=10% Similarity=0.082 Sum_probs=88.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|++++|||.+|+++..+... .+..+..++..||++...++++++.+|+++..++..|..
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~ 134 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS 134 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence 4678999999999999999999999999999998876654 677899999999996567899999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
.|++|..+ +|+++.|..|.
T Consensus 135 ~i~~~~~~-~LVv~~e~~S~ 153 (353)
T PRK12880 135 LIQSGLGK-ILLICGDTLSK 153 (353)
T ss_pred HHHcCCCC-EEEEEehhhhc
Confidence 99999999 99888898654
No 89
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.13 E-value=1.9e-10 Score=108.65 Aligned_cols=93 Identities=18% Similarity=0.321 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
++.+..+|+.+|+++||+++||+++|||.+++|.... ....+..++..+|+ |.+.++++|+++..++..|+.
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~----Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~ 123 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN----QIISANFAARELGI----PFLGLYGACSTMMESLALGSM 123 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC----CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHH
Confidence 5678889999999999999999999999999986421 23456677788886 699999999999999999999
Q ss_pred HHHhCCCCEEEEEeecccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~~ 170 (320)
+|++|.+|+||+++.|.++..
T Consensus 124 lI~SG~ad~VLVV~Ssh~s~a 144 (337)
T PRK08304 124 LIDGGFADRVLAATSSHFATA 144 (337)
T ss_pred HHhcCCCCEEEEEEcchhhhh
Confidence 999999999999999887754
No 90
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.12 E-value=1.7e-10 Score=113.52 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--cEEEEeecCCC-------------C-----------chhhHHHHHHHHcCCCCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAPG-------------S-----------TRAMECRMAAFYAGFPET 127 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID--~vi~g~~~~~~-------------~-----------~~~~~a~~va~~lGl~~~ 127 (320)
...|+..++++||+|+|+++.+.+ ++++|...... . ....++..++..+|+ .
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 568999999999999999643333 45555432110 0 001245677889998 6
Q ss_pred CCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 128 ~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
+|++++.++|+|++.||..|+++|++|++|++||+|++.
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~ 196 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALM 196 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence 899999999999999999999999999999999999863
No 91
>PRK06840 hypothetical protein; Validated
Probab=99.07 E-value=6e-10 Score=106.58 Aligned_cols=98 Identities=8% Similarity=-0.010 Sum_probs=83.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEee-cCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTV-LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA 148 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~-~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~ 148 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++. .++.. .+..+..++..+|++ ..+++.++.+|+++..+|..|.
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~ 126 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK 126 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence 46789999999999999999999999999986533 33221 344577888999995 6789999999999999999999
Q ss_pred HHHHh-CCCCEEEEEeeccccc
Q 020887 149 TAIKA-GLYDIGIAAGLESMTV 169 (320)
Q Consensus 149 ~~I~s-G~advvLv~G~E~~s~ 169 (320)
.+|++ |.++.+||++.|..+.
T Consensus 127 ~~l~~~g~~~~~Lvv~~~~~s~ 148 (339)
T PRK06840 127 DLLYSDPSIENVLLVGGYRNSD 148 (339)
T ss_pred HHHhcCCCccEEEEEeeccccc
Confidence 99999 9999999999887654
No 92
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.07 E-value=1.5e-09 Score=105.88 Aligned_cols=89 Identities=25% Similarity=0.298 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHcCCCCCC-CCcEEEEeecCCCC----------c------------------hhhHHHHHHHHcCCCC
Q 020887 76 DLLAPVLKAVIEKTRLNPSE-VGDIVVGTVLAPGS----------T------------------RAMECRMAAFYAGFPE 126 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~d-ID~vi~g~~~~~~~----------~------------------~~~~a~~va~~lGl~~ 126 (320)
.++..++++||+|+|++++. -=++++|+..+... . .+.++..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 36678999999999997532 11577777543210 0 01245678889998
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
++|++++.++|+||+.||..|++.|++|++|++||+|+|.
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~ 175 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEA 175 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 6899999999999999999999999999999999999886
No 93
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.05 E-value=2.5e-09 Score=108.44 Aligned_cols=90 Identities=17% Similarity=0.284 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHcCCCCC---CCC----cEEEEeecCCCC---c---------------------hhhHHHHHHHHcCC
Q 020887 76 DLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGS---T---------------------RAMECRMAAFYAGF 124 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~---dID----~vi~g~~~~~~~---~---------------------~~~~a~~va~~lGl 124 (320)
.++..++++||+|+||+++ +++ +|++|+..+... + ....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 5678899999999999764 333 577887644321 0 01234567888898
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
.+|.++++++|+|++.||..|+++|++|++|++||+|+|..
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~ 321 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAA 321 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence 69999999999999999999999999999999999999863
No 94
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=8.6e-10 Score=104.88 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ ..++++++.+|+++..+|..|..
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~ 125 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG 125 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence 4678999999999999999999999999999988766433 456677899999996 57899999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
+|++|. +.+|++++|.++.
T Consensus 126 ~l~~~~-~~aLVv~~d~~s~ 144 (326)
T PRK05963 126 FVRAQG-KPVLVVAANILSR 144 (326)
T ss_pred HHHcCC-CeEEEEEechhhc
Confidence 999984 8999999998663
No 95
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.01 E-value=3.5e-09 Score=104.52 Aligned_cols=92 Identities=20% Similarity=0.206 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--cEEEEeecCCCC-----------ch--------------hhHHHHHHHHcCCCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAPGS-----------TR--------------AMECRMAAFYAGFPE 126 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID--~vi~g~~~~~~~-----------~~--------------~~~a~~va~~lGl~~ 126 (320)
...|+..++++||+|||++..+-+ ++++|+..+... .+ ..++..++..+|+
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~-- 160 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA-- 160 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--
Confidence 456888999999999998432222 466676543321 00 1235567788888
Q ss_pred CCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 127 ~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
.+|++++.++|+|++.||.+|+++|++|++|++||+|+|..
T Consensus 161 ~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~ 201 (418)
T PRK07910 161 KAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETR 201 (418)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence 68999999999999999999999999999999999999874
No 96
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.00 E-value=1.3e-09 Score=105.24 Aligned_cols=96 Identities=18% Similarity=0.197 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEec-CCCCcHHHHHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA 150 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSG~~Ai~~A~~~ 150 (320)
.+..+|+.+|+++||+++|+++++||.+|+++..+ .. .+..+..+...+|++...+++.++ .+|+++..+|..|...
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~ 160 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHH
Confidence 35789999999999999999999999999887654 22 466788899999996557899998 8999999999999999
Q ss_pred HHhCCCCEEEEEeeccccc
Q 020887 151 IKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 151 I~sG~advvLv~G~E~~s~ 169 (320)
|++|..+.+|++++|.++.
T Consensus 161 ~~~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 161 LEANPGARVLVVSTELCSL 179 (361)
T ss_pred HHHCCCCEEEEEEeecccc
Confidence 9999999999999998765
No 97
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.00 E-value=9.5e-10 Score=103.44 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=80.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
++....+|+.+|++.||+++||+++|||.+++|+.... ..++..++..+|+ |.+.++++|+|+..++..|+.
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ----~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~ 121 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ----ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAAL 121 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC----cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHH
Confidence 45566799999999999999999999999999987622 2345577888886 469999999999999999999
Q ss_pred HHHhCCCCEEEEEee------ccccccccccc
Q 020887 150 AIKAGLYDIGIAAGL------ESMTVNSISVV 175 (320)
Q Consensus 150 ~I~sG~advvLv~G~------E~~s~~~~~~~ 175 (320)
.|++|.+|+||++.. |+.-+.|..++
T Consensus 122 ~VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG 153 (334)
T PRK12404 122 IVNSGGAKYVLTGASSHNAAVEKQFRYPTEYG 153 (334)
T ss_pred HHHcCCCCEEEEEeCcccchhhhhccCccccc
Confidence 999999999999864 44444555433
No 98
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.00 E-value=1.7e-09 Score=105.44 Aligned_cols=111 Identities=7% Similarity=0.042 Sum_probs=94.2
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
.++.|.|.+.+... ..+.+..+|+.+|+++||+++ ++++||.+++++..+... .+..+..+...+|++...++
T Consensus 30 ~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~~ 102 (379)
T TIGR01835 30 KFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCRS 102 (379)
T ss_pred HHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceE
Confidence 46677777777642 346778999999999999998 899999999998765532 45688899999999656889
Q ss_pred EEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 131 ~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
+.+.++|++|..|+..|...|++|..+.+||+++|...
T Consensus 103 ~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~ 140 (379)
T TIGR01835 103 FELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAK 140 (379)
T ss_pred EEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh
Confidence 99999999999999999999999999999999998854
No 99
>PLN03168 chalcone synthase; Provisional
Probab=98.98 E-value=1.9e-09 Score=105.38 Aligned_cols=95 Identities=17% Similarity=0.085 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-CeEEecCCCCcHHHHHHHHHHHH
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSG~~Ai~~A~~~I 151 (320)
...+|+.+|+++||+++|++++|||.||+++..+.. .|..+..++..||++... .++.++.+|+++..+|..|...|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 356999999999999999999999999998876633 477888999999996433 47999999999999999999999
Q ss_pred HhCCCCEEEEEeeccccc
Q 020887 152 KAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 152 ~sG~advvLv~G~E~~s~ 169 (320)
++|....||++++|.+|.
T Consensus 178 ~~~~~~~VLVV~~E~~S~ 195 (389)
T PLN03168 178 ENNKGARVLAVASEVTAV 195 (389)
T ss_pred HhCCCCEEEEEEEehhhh
Confidence 999999999999999764
No 100
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.96 E-value=8.1e-09 Score=102.13 Aligned_cols=91 Identities=12% Similarity=0.098 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc------------------EEEEeecCCCC---------------------chhhH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGD------------------IVVGTVLAPGS---------------------TRAME 114 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~------------------vi~g~~~~~~~---------------------~~~~~ 114 (320)
...|+..++++||+|||++..++++ ++.++...... ..+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 4678899999999999996444321 11221110000 01135
Q ss_pred HHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 115 CRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 115 a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
+..++..+|+ ++|+++++++|+|++.||..|+++|++|++|++||+|+|.
T Consensus 155 a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~ 204 (425)
T PRK06501 155 ADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDG 204 (425)
T ss_pred HHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence 6678889999 6899999999999999999999999999999999999985
No 101
>PLN02932 3-ketoacyl-CoA synthase
Probab=98.94 E-value=3.6e-09 Score=105.47 Aligned_cols=95 Identities=14% Similarity=0.257 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEec-CCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSG~~Ai~~A~~~I~ 152 (320)
..+|+..|+++||+++|++++|||.+|+.+..+.. .|..+..+...+|++....++.++ .+|++|+.+|..|.+.++
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~--~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNP--TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 67899999999999999999999999988877653 577899999999996678999999 899999999999999999
Q ss_pred hCCCCEEEEEeecccccc
Q 020887 153 AGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 153 sG~advvLv~G~E~~s~~ 170 (320)
+|....+||+++|.+|..
T Consensus 226 ~~~~~~aLVVstE~~S~~ 243 (478)
T PLN02932 226 VHRNTYALVVSTENITQN 243 (478)
T ss_pred cCCCCeEEEEEEeecccc
Confidence 999999999999998754
No 102
>PLN03169 chalcone synthase family protein; Provisional
Probab=98.87 E-value=5.2e-09 Score=102.46 Aligned_cols=96 Identities=11% Similarity=0.014 Sum_probs=82.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-CeEEecCCCCcHHHHHHHHHH
Q 020887 71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 71 ~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
+.+..+|+.+|+++||+++|++++|||.+|+++.. ... .+..+..++..||++... .++.++.+|+++..+|..|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 34567899999999999999999999999888763 322 466788999999996443 468999999999999999999
Q ss_pred HHHhCCCCEEEEEeecccc
Q 020887 150 AIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s 168 (320)
.|++|..+.||++++|..+
T Consensus 181 ~~~~~~~~~vLvv~~e~~s 199 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTI 199 (391)
T ss_pred HHHhCCCCeEEEEEEEcCh
Confidence 9999999999999999865
No 103
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.86 E-value=1.5e-08 Score=99.47 Aligned_cols=92 Identities=15% Similarity=0.099 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCCc-------------------------------------hh
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------------------RA 112 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~~-------------------------------------~~ 112 (320)
...|+..|+++||+|||++..+.+ ++++|+..+.... .+
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567899999999999999654333 4677776543110 01
Q ss_pred hHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 113 ~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
.++..++..+|+ ++|++++.++|+||+.||..|+++|++|++|++||+|+|..
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~ 205 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNA 205 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 356678899999 68999999999999999999999999999999999999873
No 104
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.85 E-value=9.7e-09 Score=100.95 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCc----EEEEeecCCCC-------------------------chhhHHHHHHHHcCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF 124 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~lGl 124 (320)
..+|+..++++||+|+|+++++++. +++|+..+... ....++..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 5789999999999999999888874 44444322110 011456778899999
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
.+|++++.++|+|++.||..|+++|++|++|++|++|+|..
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~ 192 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESA 192 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhc
Confidence 68999999999999999999999999999999999999973
No 105
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.85 E-value=8.5e-09 Score=94.14 Aligned_cols=91 Identities=23% Similarity=0.400 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC-----cEEEEeecCCCC--------c---------------hhhHHHHHHHHcCCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG-----DIVVGTVLAPGS--------T---------------RAMECRMAAFYAGFP 125 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID-----~vi~g~~~~~~~--------~---------------~~~~a~~va~~lGl~ 125 (320)
...|+..++.+||+|+|+++.+++ ++++|+..+... . ...++..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 568999999999999999885543 467777655210 0 11246688899999
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
++|+++++++|+||+.||..|+++|++|++|++||+|+|.
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~ 205 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDA 205 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE-
T ss_pred -CCccccccccccccccccchhccccccccccccccccccc
Confidence 6999999999999999999999999999999999999994
No 106
>PLN03172 chalcone synthase family protein; Provisional
Probab=98.84 E-value=1.4e-08 Score=99.47 Aligned_cols=93 Identities=11% Similarity=-0.001 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC-eEEecCCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
..+|+.+|+++||+++|++++|||.+|+++..+.. .+..+..++..+|++.... .+.++.+|+++..+|..|...++
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45999999999999999999999999887765532 4678889999999964443 46889999999999999999999
Q ss_pred hCCCCEEEEEeecccc
Q 020887 153 AGLYDIGIAAGLESMT 168 (320)
Q Consensus 153 sG~advvLv~G~E~~s 168 (320)
+|....||++++|..|
T Consensus 180 ~~~~~~vLVV~~E~~S 195 (393)
T PLN03172 180 NNAGSRVLVVCSEITA 195 (393)
T ss_pred cCCCCeEEEEEEehhh
Confidence 9999999999999977
No 107
>PLN03171 chalcone synthase-like protein; Provisional
Probab=98.84 E-value=1.3e-08 Score=99.93 Aligned_cols=95 Identities=14% Similarity=0.011 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-CeEEecCCCCcHHHHHHHHHHHH
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSG~~Ai~~A~~~I 151 (320)
+..+|+.+|+++||+++|++++|||.||+++..+.. .+..+..+...+|++... ..+.+..+|+++..+|..|...|
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li 184 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH--IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA 184 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC--CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence 678999999999999999999999999988877654 467788899999996432 25667779999999999999999
Q ss_pred HhCCCCEEEEEeeccccc
Q 020887 152 KAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 152 ~sG~advvLv~G~E~~s~ 169 (320)
++|..+.||++++|..|.
T Consensus 185 ~~~~~~~vLVv~~e~~s~ 202 (399)
T PLN03171 185 ENNRGARVLVVAAEITLL 202 (399)
T ss_pred HhCCCCeEEEEEEecccc
Confidence 999999999999999764
No 108
>PLN03170 chalcone synthase; Provisional
Probab=98.83 E-value=8e-09 Score=101.42 Aligned_cols=94 Identities=13% Similarity=0.023 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-CeEEecCCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
..+|+.+|+++||+++|++++|||.+|+++..+.. .+.++..++..||++... .++.++.+|+++..+|..|...++
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999887765422 567888999999996433 378999999999999999999999
Q ss_pred hCCCCEEEEEeeccccc
Q 020887 153 AGLYDIGIAAGLESMTV 169 (320)
Q Consensus 153 sG~advvLv~G~E~~s~ 169 (320)
+|....||++++|..|.
T Consensus 184 ~~~~~~vLVV~~E~~S~ 200 (401)
T PLN03170 184 NNRGARVLVVCSEITAV 200 (401)
T ss_pred cCCCCeEEEEEEehhhh
Confidence 99999999999998763
No 109
>PLN02377 3-ketoacyl-CoA synthase
Probab=98.83 E-value=1.5e-08 Score=101.67 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEec-CCCCcHHHHHHHHHHHH
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAI 151 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSG~~Ai~~A~~~I 151 (320)
...+++..|+++||+++|++++|||.+|+ +..+... .|..+..+...+|++....++.++ .+|++|..+|..|..+|
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 34688899999999999999999999987 3333322 467889999999997678899999 69999999999999999
Q ss_pred HhCCCCEEEEEeecccccc
Q 020887 152 KAGLYDIGIAAGLESMTVN 170 (320)
Q Consensus 152 ~sG~advvLv~G~E~~s~~ 170 (320)
++|....+||+++|.+|..
T Consensus 249 ~~~~~~~aLVVstE~~S~~ 267 (502)
T PLN02377 249 QVHRNTYAVVVSTENITQN 267 (502)
T ss_pred HcCCCCEEEEEEEeccccc
Confidence 9999999999999997743
No 110
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=98.82 E-value=1.1e-08 Score=101.77 Aligned_cols=98 Identities=14% Similarity=0.212 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHH---HHcCCCCCCCeEEecCCCCcHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA---FYAGFPETVPLRTVNRQCSSGLQAVAD 146 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va---~~lGl~~~~p~~~v~~aCaSG~~Ai~~ 146 (320)
.+++...|++.|++.+|+++|+++++||.|++++..+... .+..+..+. ..+|.+ ...+++++.+|.+++.||..
T Consensus 49 ~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~~-~~~afDi~~AC~G~~~AL~~ 126 (459)
T PLN02577 49 DVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGNT-DIEGVDSTNACYGGTAALLN 126 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCCC-CcEEeehhhhhHHHHHHHHH
Confidence 5788999999999999999999999999999998776432 455666664 566774 68899999999999999999
Q ss_pred HHHHHHhCCC--CEEEEEeeccccc
Q 020887 147 VATAIKAGLY--DIGIAAGLESMTV 169 (320)
Q Consensus 147 A~~~I~sG~a--dvvLv~G~E~~s~ 169 (320)
|...|++|.. +.+||+|+|..+.
T Consensus 127 A~~~i~sg~~~~~~aLVV~aD~a~~ 151 (459)
T PLN02577 127 CVNWVESSSWDGRYGLVVAADSAVY 151 (459)
T ss_pred HHHHHHcCCCCCCeEEEEEechhhc
Confidence 9999999985 9999999999653
No 111
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.82 E-value=1.4e-08 Score=99.78 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC------------c--------------hhhHHHHHHHHcC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------T--------------RAMECRMAAFYAG 123 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~------------~--------------~~~~a~~va~~lG 123 (320)
...++..|+++||+|+|+++++++ ++++|+..+... . ...++..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 557889999999999999765554 466665433210 0 0135667889999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
+ ++|+++++++|+||+.||..|+++|++|++|++||+|+|..+
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~ 193 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELD 193 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence 8 689999999999999999999999999999999999998753
No 112
>PLN03173 chalcone synthase; Provisional
Probab=98.82 E-value=1.4e-08 Score=99.34 Aligned_cols=93 Identities=11% Similarity=-0.006 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-CeEEecCCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
..+|+.+|+++||+++|++++|||.+|+++..+.. .+..+..++..+|++... ..+.++.+|+++..+|..|...++
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999887765432 467888999999996433 356789999999999999999999
Q ss_pred hCCCCEEEEEeecccc
Q 020887 153 AGLYDIGIAAGLESMT 168 (320)
Q Consensus 153 sG~advvLv~G~E~~s 168 (320)
+|....|||+++|..|
T Consensus 180 ~~~~~~vLVV~~E~~S 195 (391)
T PLN03173 180 NNKGARVLVVCSEITA 195 (391)
T ss_pred hCCCCeEEEEEEehhh
Confidence 9999999999999877
No 113
>PLN02192 3-ketoacyl-CoA synthase
Probab=98.81 E-value=1.9e-08 Score=100.82 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEec-CCCCcHHHHHHHHHHHHHh
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIKA 153 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSG~~Ai~~A~~~I~s 153 (320)
+.++..|+++||+++|++++|||.+|+.+. ... ..|..+..+...+|+.....+++++ .+|++|+.+|..|.+.+++
T Consensus 177 ~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~-~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a 254 (511)
T PLN02192 177 ETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFN-PTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV 254 (511)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCC-CCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence 577889999999999999999999988755 322 2577888999999996568899999 6999999999999999999
Q ss_pred CCCCEEEEEeecccc
Q 020887 154 GLYDIGIAAGLESMT 168 (320)
Q Consensus 154 G~advvLv~G~E~~s 168 (320)
+....+||+++|.+|
T Consensus 255 ~~~~~aLVVstE~~S 269 (511)
T PLN02192 255 HPNSYALVISMENIT 269 (511)
T ss_pred CCCCeEEEEEEEecc
Confidence 999999999999987
No 114
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=98.79 E-value=3.1e-08 Score=95.47 Aligned_cols=98 Identities=19% Similarity=0.147 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHHHcC-CCCCCCCcEEEEeec--CCCC--chhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVL--APGS--TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD 146 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAG-l~~~dID~vi~g~~~--~~~~--~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~ 146 (320)
.+..+|+..|++++|++++ +++++||.+++.... .... ..+.....++..+|+....++++++++|+||.+||..
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~ 142 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHH
Confidence 4678999999999999999 788999987764321 0110 0123456778889985557889999999999999999
Q ss_pred HHHHHHhCCCCEEEEEeeccccc
Q 020887 147 VATAIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 147 A~~~I~sG~advvLv~G~E~~s~ 169 (320)
|+++|++|++|.+||+|+|.++.
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~ 165 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLT 165 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccC
Confidence 99999999999999999998765
No 115
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=98.73 E-value=4.8e-08 Score=97.04 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=82.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHc---CCCCCCCeEEecCCCCcHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA---GFPETVPLRTVNRQCSSGLQAVAD 146 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~l---Gl~~~~p~~~v~~aCaSG~~Ai~~ 146 (320)
.+.+..+|+..|++.+|+++++++++||.|++|+..+... .+..+..+...+ |. ....++.+.++|.++..||..
T Consensus 46 ~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~-~~~~~fDi~~AC~G~t~AL~~ 123 (454)
T TIGR01833 46 DREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TDVEGIDTTNACYGGTAALFN 123 (454)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCC-CCceEEeccccchhHHHHHHH
Confidence 5689999999999999999999999999999988766543 455666776644 55 467899999999999999999
Q ss_pred HHHHHHhCCC--CEEEEEeeccc
Q 020887 147 VATAIKAGLY--DIGIAAGLESM 167 (320)
Q Consensus 147 A~~~I~sG~a--dvvLv~G~E~~ 167 (320)
|...|++|.. +.+||+++|..
T Consensus 124 A~~~i~s~~~~~~~aLVV~sDia 146 (454)
T TIGR01833 124 AINWIESSSWDGRYALVVAGDIA 146 (454)
T ss_pred HHHHHHcCCcCCCeEEEEEeccc
Confidence 9999999974 89999999983
No 116
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=5.8e-08 Score=95.49 Aligned_cols=93 Identities=17% Similarity=0.231 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCC----cEEEEeecCCCCc-------------------------hhhHHHHHHHHcC
Q 020887 74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGST-------------------------RAMECRMAAFYAG 123 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~-~dID----~vi~g~~~~~~~~-------------------------~~~~a~~va~~lG 123 (320)
...|+..++++||+|||+.. ..++ ++++|+..+.... ...++..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 45788999999999999843 2232 5777765432110 0124667888999
Q ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 124 l~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
+ ++|.+++.++|+||+.||..|+++|++|++|++||+|+|.++
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~ 195 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC 195 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcC
Confidence 8 689999999999999999999999999999999999998753
No 117
>PLN02854 3-ketoacyl-CoA synthase
Probab=98.68 E-value=7.4e-08 Score=96.83 Aligned_cols=92 Identities=16% Similarity=0.248 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEec-CCCCcHHHHHHHHHHHHHh
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIKA 153 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~-~aCaSG~~Ai~~A~~~I~s 153 (320)
+.....++.++|+++|++++|||.+|+.++ +.. ..|..+..+...+|++....++.++ .+|++|..+|..|.+.|++
T Consensus 189 ~~v~~~~~~~lL~kaGi~p~dID~LIv~cS-~~~-p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~ 266 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKPRDIGILIVNCS-LFN-PTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA 266 (521)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCC-CCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence 455667889999999999999999998644 332 2477889999999996678899998 8999999999999999999
Q ss_pred CCCCEEEEEeecccc
Q 020887 154 GLYDIGIAAGLESMT 168 (320)
Q Consensus 154 G~advvLv~G~E~~s 168 (320)
|....+||+++|.+|
T Consensus 267 ~~~~~aLVVstE~~S 281 (521)
T PLN02854 267 NPNSYAVVVSTENIT 281 (521)
T ss_pred CCCCeEEEEEEeeee
Confidence 999999999999977
No 118
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.64 E-value=1.4e-07 Score=92.61 Aligned_cols=91 Identities=15% Similarity=0.250 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC-----------c--------------hhhHHHHHHHHcCC
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGF 124 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~-----------~--------------~~~~a~~va~~lGl 124 (320)
...|+..++++||+|+|++++.++ ++++|+..+... . ...++..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 568899999999999999877665 467776543321 0 01245678889998
Q ss_pred CCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 125 ~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
++|++++.++|+||+.||..|+++|++|+ |++||+|+|..
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~ 190 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSA 190 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccc
Confidence 69999999999999999999999999999 99999999873
No 119
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.57 E-value=1.8e-07 Score=91.90 Aligned_cols=92 Identities=22% Similarity=0.303 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHHHcCCC-CCCCC---cEEEEeecCCCCc--------------------------hhhHHHHHHHHc
Q 020887 73 LADDLLAPVLKAVIEKTRLN-PSEVG---DIVVGTVLAPGST--------------------------RAMECRMAAFYA 122 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~-~~dID---~vi~g~~~~~~~~--------------------------~~~~a~~va~~l 122 (320)
....|+..|+.+||+|+|++ ..+.+ ++++|+..++... ....+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 57799999999999999997 33443 3555655543320 013466788999
Q ss_pred CCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 123 Gl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
|+ .++.+++.++|+||.+||..|+++|+.|++|++|++|+|.
T Consensus 150 g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~ 191 (412)
T COG0304 150 GL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA 191 (412)
T ss_pred CC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence 98 6899999999999999999999999999999999999977
No 120
>PLN00415 3-ketoacyl-CoA synthase
Probab=98.55 E-value=3.2e-07 Score=90.94 Aligned_cols=96 Identities=21% Similarity=0.251 Sum_probs=80.0
Q ss_pred CCHHHHHHH-HHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecC-CCCcHHHHHHHHHH
Q 020887 72 TLADDLLAP-VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR-QCSSGLQAVADVAT 149 (320)
Q Consensus 72 ~s~~eLa~~-A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~-aCaSG~~Ai~~A~~ 149 (320)
....||+.. |+++||+++|++++|||.+|+.++ +.. ..+.++..+...+|++.....+.++. +|++|..+|..|..
T Consensus 131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T-~~~-~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 131 RHESELVIFGALNSLFKKTGIEPREVGIFIVNCS-LFN-PNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN 208 (466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECc-CCC-CCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence 344566655 778889999999999998886543 322 24677888999999976788999997 99999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
.++++....+|++++|..|.
T Consensus 209 ll~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 209 LLKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHHhCCCCEEEEEEEecccc
Confidence 99999999999999999774
No 121
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.53 E-value=2.8e-07 Score=100.32 Aligned_cols=92 Identities=23% Similarity=0.361 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCCch------------------hhHHHHHHHHcCCCCCCCeE
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGSTR------------------AMECRMAAFYAGFPETVPLR 131 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~~~------------------~~~a~~va~~lGl~~~~p~~ 131 (320)
.+.|..+.+++||+|||+.++.+. +|+.|....+.... ...+..++..+++ .+|.+
T Consensus 91 QqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~ 168 (1061)
T COG3321 91 QQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSV 168 (1061)
T ss_pred hHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCc
Confidence 345889999999999999999888 46666554333200 1357788999999 69999
Q ss_pred EecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 132 ~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
.|+++|+|++.|+++|++.|++|+||++|++|+..+
T Consensus 169 ~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~ 204 (1061)
T COG3321 169 TVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLV 204 (1061)
T ss_pred cccchhhHHHHHHHHHHHHHHcCCCCEEEecceEec
Confidence 999999999999999999999999999999998554
No 122
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.51 E-value=8.1e-08 Score=90.78 Aligned_cols=92 Identities=20% Similarity=0.302 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCC---CCC----cEEEEeecCCCCc-------------------------hhhHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGST-------------------------RAMECRMAAFY 121 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~---dID----~vi~g~~~~~~~~-------------------------~~~~a~~va~~ 121 (320)
+..|+..|+++||+|+|+.+. +.| +|.+|..+++... .+..+.+++..
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 467889999999999998654 334 5666766554320 01235678899
Q ss_pred cCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccc
Q 020887 122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167 (320)
Q Consensus 122 lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~ 167 (320)
+|+ .+|..++.++|++|.++|..|++.|+.|.+|++|++|.|+.
T Consensus 174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~ 217 (440)
T KOG1394|consen 174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEAC 217 (440)
T ss_pred hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCccee
Confidence 998 69999999999999999999999999999999999999984
No 123
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.45 E-value=6.2e-07 Score=104.37 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCC-----------------------------------------
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS----------------------------------------- 109 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~----------------------------------------- 109 (320)
..|+.+++++||+|||+..+ ++ ++++|+..+...
T Consensus 94 qrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (2582)
T TIGR02813 94 QLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHW 172 (2582)
T ss_pred HHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhccccccc
Confidence 46788999999999999643 44 577775432100
Q ss_pred --------chhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 110 --------TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 110 --------~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
..+.++..++..+|| ++|+++|+++|+|++.||+.|++.|++|+||++|+||++.
T Consensus 173 ~~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~ 235 (2582)
T TIGR02813 173 EENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCT 235 (2582)
T ss_pred CccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence 012356778899999 7999999999999999999999999999999999999876
No 124
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=98.40 E-value=5e-07 Score=86.83 Aligned_cols=99 Identities=17% Similarity=0.335 Sum_probs=87.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~ 149 (320)
.+++..-|+++|++.+|+++++++.+|+.|++|+-.+... .-..+..++..+|+++...++.+..+|-+|+.+|+.|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999999998654332 345788999999998888889999999999999999999
Q ss_pred HHHhCCCCEEEEEeeccccc
Q 020887 150 AIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 150 ~I~sG~advvLv~G~E~~s~ 169 (320)
.|.+|..+.+||+|.|....
T Consensus 126 ~v~s~~~~~~LvI~sD~a~~ 145 (377)
T COG3425 126 WVESGMISYGLVIGADTAQY 145 (377)
T ss_pred HHHcCCccceEEEeehhhcc
Confidence 99999999999999988543
No 125
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.32 E-value=3.7e-06 Score=78.49 Aligned_cols=97 Identities=19% Similarity=0.242 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEe-cCCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v-~~aCaSG~~Ai~~A~~~I~ 152 (320)
.+.++..++.++|+++||+|+|||.+|+.+..... .|.++.++...+|+...+-.+.+ ..||++|+.+|..|.++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 45688899999999999999999999887765443 47788999999999766777776 4689999999999999999
Q ss_pred hCCCCEEEEEeecccccccc
Q 020887 153 AGLYDIGIAAGLESMTVNSI 172 (320)
Q Consensus 153 sG~advvLv~G~E~~s~~~~ 172 (320)
.-.-..+|++++|..+..-+
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y 180 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWY 180 (290)
T ss_pred hCCCcEEEEEEEeecccccc
Confidence 98888999999999886433
No 126
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=98.27 E-value=4.1e-06 Score=75.89 Aligned_cols=94 Identities=13% Similarity=0.107 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEE-ecCCCCcHHHHHHHHHHHH
Q 020887 73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-VNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 73 s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~-v~~aCaSG~~Ai~~A~~~I 151 (320)
...+|+.+|+++||+++|++++||+.+|+.+..+.. .|.+...+...|||++.+.-+. ...||.+|..+|..|....
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~--~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA--APGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE--CS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC--CCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 456899999999999999999999999987766543 4667778889999976554443 4579999999999999999
Q ss_pred HhCCCCEEEEEeecccc
Q 020887 152 KAGLYDIGIAAGLESMT 168 (320)
Q Consensus 152 ~sG~advvLv~G~E~~s 168 (320)
++..-..||++.+|-.|
T Consensus 177 ~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 177 RANPGARVLVVCVELCS 193 (226)
T ss_dssp HHSTT-EEEEEEEEEGG
T ss_pred hCCccceEEEEEEEeeE
Confidence 99888899999999765
No 127
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.07 E-value=6.6e-06 Score=71.39 Aligned_cols=97 Identities=13% Similarity=0.253 Sum_probs=77.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC--CCCCeEEecCCCCcHHHHHHHH
Q 020887 70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLRTVNRQCSSGLQAVADV 147 (320)
Q Consensus 70 ~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~--~~~p~~~v~~aCaSG~~Ai~~A 147 (320)
..++...|++.|++.+|++.++++++|+.+++|+-.+-- ..-.++.++...||++ .....+.+-++|=+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD-~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVD-KSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SB-SSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEecccccc-ccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 567899999999999999999999999999999754322 2345788899999994 2345678899999999999999
Q ss_pred HHHHHhCCCC--EEEEEeeccc
Q 020887 148 ATAIKAGLYD--IGIAAGLESM 167 (320)
Q Consensus 148 ~~~I~sG~ad--vvLv~G~E~~ 167 (320)
+..|+++..+ .+||++.|-.
T Consensus 128 ~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 128 VNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp HHHHCSTTSTTEEEEEEEEEEE
T ss_pred HHHHhcCCCCCCeEEEEecccc
Confidence 9999998765 8999998763
No 128
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.05 E-value=2e-05 Score=77.18 Aligned_cols=53 Identities=28% Similarity=0.491 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccc
Q 020887 114 ECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168 (320)
Q Consensus 114 ~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s 168 (320)
++..++..+|+ ++|.+++..+|+|++.||..|+++|++|++|+|||+|+|..+
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~ 191 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC 191 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccC
Confidence 56778899998 579999999999999999999999999999999999999754
No 129
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.85 E-value=7.8e-05 Score=69.68 Aligned_cols=93 Identities=15% Similarity=0.117 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEe-cCCCCcHHHHHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v-~~aCaSG~~Ai~~A~~~I~ 152 (320)
...|..++.++||+.+++.++|||.+++.++.+-. .+.+-..+...|||++...-+-+ .-+|+.|..++..|...++
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~--~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA--TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc--CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 45788999999999999999999999988876544 45666777889999764433333 4689999999999999999
Q ss_pred hCCCCEEEEEeecccc
Q 020887 153 AGLYDIGIAAGLESMT 168 (320)
Q Consensus 153 sG~advvLv~G~E~~s 168 (320)
..-...||++.+|--|
T Consensus 154 a~P~~~vlvV~vELCS 169 (356)
T COG3424 154 AAPDANVLVVCVELCS 169 (356)
T ss_pred hCccceEEEEEeeeee
Confidence 9989999999988654
No 130
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.72 E-value=2.1e-05 Score=83.82 Aligned_cols=91 Identities=26% Similarity=0.336 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC----cEEEEeecCCCCc----------h--------hhHHHHHHHHcCCCCCCCeE
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST----------R--------AMECRMAAFYAGFPETVPLR 131 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID----~vi~g~~~~~~~~----------~--------~~~a~~va~~lGl~~~~p~~ 131 (320)
...|..++.++|+-||||.|+++. ++++|+...+..+ | ...+..++..+.+ .+|++
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 458999999999999999999887 4667765543320 0 1223344555566 79999
Q ss_pred EecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecc
Q 020887 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166 (320)
Q Consensus 132 ~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~ 166 (320)
.++++|+|++.++..|++.|++|+||.+||.|+.-
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~l 199 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANL 199 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccce
Confidence 99999999999999999999999999999999754
No 131
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.43 E-value=0.00088 Score=62.81 Aligned_cols=84 Identities=19% Similarity=0.321 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHh
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA 153 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~s 153 (320)
...|..+|++.||++++++++|||.++.|--... ...+...+..+++ |.+-+-.+|++...+|..|+..|..
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ----~i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdg 122 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQ----IISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDG 122 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCC----CCHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhh----hHHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhC
Confidence 3578889999999999999999999987754432 2334556677776 5888999999999999999999999
Q ss_pred CCCCEEEEEeec
Q 020887 154 GLYDIGIAAGLE 165 (320)
Q Consensus 154 G~advvLv~G~E 165 (320)
|-+|.||++...
T Consensus 123 g~a~~vla~tSS 134 (329)
T PF07451_consen 123 GFADYVLAATSS 134 (329)
T ss_dssp TS-SEEEEEEEE
T ss_pred CCcceEEEEecc
Confidence 999999988643
No 132
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.11 E-value=0.00074 Score=51.08 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=35.1
Q ss_pred EEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeeccccc
Q 020887 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169 (320)
Q Consensus 131 ~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~ 169 (320)
|+++++|++++.+|..|..+|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 678999999999999999999999999999999999876
No 133
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=96.48 E-value=0.00066 Score=66.67 Aligned_cols=48 Identities=23% Similarity=0.234 Sum_probs=41.4
Q ss_pred cCCCCCccceEEEeccCCCCCCCCHHHHhcCCCcccCCCcccCCCCCCCCCcceEEEEcCHHH
Q 020887 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSL 307 (320)
Q Consensus 245 ~~p~a~~~~~~~~~~De~~r~~~t~e~l~~~~~i~~~~gplt~~d~s~~sDGAaAvvLaSee~ 307 (320)
+||+++. +++++.+++++++++.+ |++++|||+.+||++++++++++.
T Consensus 187 ~np~a~~------------~~eI~~~~v~~~~~~~d---p~~r~d~~~~~dg~a~l~~a~~~~ 234 (392)
T COG0183 187 ANPKAGF------------FDEITPEDVLNSPVVAD---PLRRLDCSPTSDGAAALVPAFEEV 234 (392)
T ss_pred hhHhcCC------------CCceeeEEecCCceecC---CcccCCCCCChhhhcCceeccccC
Confidence 4787775 34789999999988774 999999999999999999999885
No 134
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=94.51 E-value=0.39 Score=43.44 Aligned_cols=92 Identities=10% Similarity=-0.004 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCch-----------------------hhHHHHHHHHcCCCCCCCe
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR-----------------------AMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~-----------------------~~~a~~va~~lGl~~~~p~ 130 (320)
...|+..++.+++++. .++|.+|+++..|..... +.++..++...+. ..+.
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 5688888888887542 567889999877654310 1345667777776 6899
Q ss_pred EEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEeecccccccc
Q 020887 131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172 (320)
Q Consensus 131 ~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~E~~s~~~~ 172 (320)
.++..+-.+...++..|+..+..| .+-||++.+|.....++
T Consensus 108 tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y 148 (218)
T PF13723_consen 108 TALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPY 148 (218)
T ss_pred EEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhh
Confidence 999998899999999999999999 88899999988654443
No 135
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=90.66 E-value=1.3 Score=44.97 Aligned_cols=109 Identities=12% Similarity=0.014 Sum_probs=65.2
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
.+.|+|.|.+...-.... ....+.........++++|++.|||+++|||.+-+-..+ +.......+.|||...
T Consensus 265 ~~~V~i~g~a~~~~~~~~-~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF------~~~~~~~~E~LGl~~~ 337 (498)
T PRK08257 265 DRWVYLHGGADAHDPYDI-LERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCF------PSAVQVAARELGLDLD 337 (498)
T ss_pred CceEEEEEEEEeeCcccc-ccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCC------HHHHHHHHHHcCcCCC
Confidence 356999988766321100 011222223334579999999999999999976443222 1122334477888533
Q ss_pred C-CeEEecC--------CCCcHHHHHHHHHHHHHhCCCCEEEEEe
Q 020887 128 V-PLRTVNR--------QCSSGLQAVADVATAIKAGLYDIGIAAG 163 (320)
Q Consensus 128 ~-p~~~v~~--------aCaSG~~Ai~~A~~~I~sG~advvLv~G 163 (320)
+ ...+++. ..++|+..|..++..++....++.|+.+
T Consensus 338 g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~ 382 (498)
T PRK08257 338 DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTA 382 (498)
T ss_pred CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEEC
Confidence 1 1233332 2455788889999999866677777754
No 136
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=88.07 E-value=3.7 Score=39.64 Aligned_cols=54 Identities=13% Similarity=0.083 Sum_probs=34.7
Q ss_pred CCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 47 ~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
....++|.|.+...-.... ....+.....-...++++||+++||+++|||.+-+
T Consensus 223 ~~~~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei 276 (375)
T cd00829 223 TDRPVWILGVGAASDTPSL-SERDDFLSLDAARLAARRAYKMAGITPDDIDVAEL 276 (375)
T ss_pred CCCCeEEEEEEEecCCccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 3456899998776443210 01111112344468999999999999999997643
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=87.26 E-value=0.53 Score=35.84 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=40.4
Q ss_pred HHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEe----cCCCCcHHHHHHHHHH--HHHhCCCCEE
Q 020887 86 IEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVAT--AIKAGLYDIG 159 (320)
Q Consensus 86 L~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v----~~aCaSG~~Ai~~A~~--~I~sG~advv 159 (320)
|+++|++++|||.+++-+.. ......+...+|++.......+ +.+|++-..++..+.+ .|+ .-|.+
T Consensus 1 L~~~g~~~~did~~i~hq~~------~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~--~Gd~v 72 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS------KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIK--PGDRV 72 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS------HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSC--TTEEE
T ss_pred CccccCCHHHCCEEEeCCCC------HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCC--CCCEE
Confidence 68999999999999875432 2344457788999754333332 2345555555555444 232 34577
Q ss_pred EEEeecc
Q 020887 160 IAAGLES 166 (320)
Q Consensus 160 Lv~G~E~ 166 (320)
+++++-.
T Consensus 73 l~~~~G~ 79 (90)
T PF08541_consen 73 LLVGFGA 79 (90)
T ss_dssp EEEEEET
T ss_pred EEEEEEh
Confidence 7766543
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.96 E-value=3.7 Score=39.94 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHc-----CCCCCCCeEEecCCCCcHHHHHHHHHH-HH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA-----GFPETVPLRTVNRQCSSGLQAVADVAT-AI 151 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~l-----Gl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I 151 (320)
...+++++|+++|+.++|||.++.-+.. ...-..+...+ |+|......++..-+.++..++-.+.. ++
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~n------~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYSS------EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCccc------HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 3677888999999999999988754332 12334455554 887544444555444334333322222 23
Q ss_pred HhCCC---CEEEEEeecc
Q 020887 152 KAGLY---DIGIAAGLES 166 (320)
Q Consensus 152 ~sG~a---dvvLv~G~E~ 166 (320)
..|+. |.|++.+.++
T Consensus 348 ~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 348 NSGRLKPGQKILCFVPES 365 (378)
T ss_pred HcCCCCCCCEEEEEEecc
Confidence 44443 6777776665
No 139
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=85.93 E-value=5.6 Score=38.84 Aligned_cols=100 Identities=13% Similarity=0.122 Sum_probs=71.7
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeec-CCCCchhhHHHHHHHHcC---CC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL-APGSTRAMECRMAAFYAG---FP 125 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~-~~~~~~~~~a~~va~~lG---l~ 125 (320)
.-|-||.|++..+-. -...+...|...++..++++-.|+++.|.-+-+|+-. ..- .-.+-..+.+.++ -
T Consensus 40 gKytIGLGq~~Mgfc----sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK--SKSVKt~LMqLF~~sgN- 112 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGFC----SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK--SKSVKTVLMQLFEESGN- 112 (462)
T ss_pred cceEeccCcceeccc----CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc--chHHHHHHHHHhhhcCC-
Confidence 358889899887631 1335677899999999999999999999999888632 111 1122233334443 2
Q ss_pred CCCCeEEecCCCCcHHHHHHHHHHHHHhCCC
Q 020887 126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLY 156 (320)
Q Consensus 126 ~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~a 156 (320)
..+...+..++|=+|.+|+-.|.+.|.+-.-
T Consensus 113 tdIEGiDttnACYGGtaALfnavnWiESssW 143 (462)
T KOG1393|consen 113 TDIEGIDTTNACYGGTAALFNAVNWIESSSW 143 (462)
T ss_pred CccccccccccccccHHHHHHHhhhhhhccc
Confidence 2466778889999999999999999998433
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=85.89 E-value=2.3 Score=40.24 Aligned_cols=83 Identities=11% Similarity=0.099 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHhC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAG 154 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~sG 154 (320)
+...++.+++|+++|++++|||.+++-+. ....-..+...+|+|.......+..-+.++...+-.+.. ++..|
T Consensus 227 ~~~~~~~~~~L~~~gl~~~did~~~~h~~------~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~ 300 (326)
T PRK05963 227 RMMSGASQNVLASAAMTPQDIDRFFPHQA------NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQ 300 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhC
Confidence 34456788999999999999998876222 123455677889997554444444444555555544433 34444
Q ss_pred CC---CEEEEEee
Q 020887 155 LY---DIGIAAGL 164 (320)
Q Consensus 155 ~a---dvvLv~G~ 164 (320)
+. |.+|..++
T Consensus 301 ~~~~Gd~vll~~~ 313 (326)
T PRK05963 301 PLREGERLLFAAA 313 (326)
T ss_pred CCCCCCEEEEEEE
Confidence 33 66776654
No 141
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.57 E-value=2.6 Score=39.85 Aligned_cols=81 Identities=12% Similarity=0.057 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHhCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAGLY 156 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~sG~a 156 (320)
...+++++|+++|++++|||.+++-.. ....-..+...+|+|......++..-+.++...+-.+.. +++.|+.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~------~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~ 305 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQA------SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKV 305 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCC
Confidence 557889999999999999998875332 123455778889997544333444444444444433333 3455543
Q ss_pred ---CEEEEEee
Q 020887 157 ---DIGIAAGL 164 (320)
Q Consensus 157 ---dvvLv~G~ 164 (320)
|.++..++
T Consensus 306 ~~Gd~vll~~~ 316 (329)
T PRK07204 306 QRGNKILLLGT 316 (329)
T ss_pred CCCCEEEEEEE
Confidence 56665543
No 142
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=84.76 E-value=1.9 Score=41.44 Aligned_cols=84 Identities=19% Similarity=0.162 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeE-----Ee-cCCCCcHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-----TV-NRQCSSGLQAVADV 147 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~-----~v-~~aCaSG~~Ai~~A 147 (320)
....+..+++++|+++|++++|||.+++-... ...-..+...+|+|...... ++ |.+++|-..++..+
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~------~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~ 279 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN------GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV 279 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC------hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence 34455688899999999999999988764322 12344567889997432222 22 33444555566666
Q ss_pred HHHHHhCCCCEEEEEeec
Q 020887 148 ATAIKAGLYDIGIAAGLE 165 (320)
Q Consensus 148 ~~~I~sG~advvLv~G~E 165 (320)
...++.| |.|+.+|+-
T Consensus 280 ~~~~~~G--d~vll~~~G 295 (345)
T TIGR00748 280 LDIAEPG--DRILAVSYG 295 (345)
T ss_pred HHhcCCC--CEEEEEEec
Confidence 5555555 466666543
No 143
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=84.39 E-value=7.9 Score=37.78 Aligned_cols=53 Identities=19% Similarity=0.093 Sum_probs=33.5
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
...++|.|.+........ ....+.....-...++++||+++||+++|||.+-+
T Consensus 231 ~~~v~I~g~g~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~ 283 (389)
T PRK06064 231 DTPVWIKASGQASDTIAL-HDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEV 283 (389)
T ss_pred CCCeEEEEEEEecCcccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 356899998776443211 01112211233457899999999999999997643
No 144
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=83.83 E-value=6.4 Score=39.34 Aligned_cols=96 Identities=11% Similarity=-0.001 Sum_probs=54.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
+.++|+|.+....... ....+......+..+++.|++++||+++|||.+-+-..+. ...-...+.+|+...+
T Consensus 284 ~~v~i~g~~~~~~~~~--~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa------~~~l~~~e~lGl~~~G 355 (438)
T PTZ00455 284 RLVEIKSLACASGNLY--EDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFT------IAELLMYEALGIAEYG 355 (438)
T ss_pred ccEEEEEEEEecCCcc--cCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccCh------HHHHHHHHHcCCCCCC
Confidence 3599999877643210 0011222233447899999999999999999664321111 1122233566764321
Q ss_pred ----------------CeEEecC--------CCCcHHHHHHHHHHHHH
Q 020887 129 ----------------PLRTVNR--------QCSSGLQAVADVATAIK 152 (320)
Q Consensus 129 ----------------p~~~v~~--------aCaSG~~Ai~~A~~~I~ 152 (320)
..+.++. .++||..-+.+++..++
T Consensus 356 ~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLr 403 (438)
T PTZ00455 356 HAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMK 403 (438)
T ss_pred chHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHh
Confidence 1222222 25677878888888886
No 145
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=82.70 E-value=11 Score=35.22 Aligned_cols=79 Identities=16% Similarity=0.098 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCC---CC-CCCeEEecCCCCcHHHHHHHHHHH
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF---PE-TVPLRTVNRQCSSGLQAVADVATA 150 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl---~~-~~p~~~v~~aCaSG~~Ai~~A~~~ 150 (320)
.+....+++++|+++|++++|||.+++-....... ............+. +. ......=+..++++...+..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG-DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC-CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 35566899999999999999999887644322211 11111111122221 00 011122345677888888888887
Q ss_pred HHhC
Q 020887 151 IKAG 154 (320)
Q Consensus 151 I~sG 154 (320)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 7776
No 146
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.73 E-value=4.7 Score=38.23 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHhC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAG 154 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~sG 154 (320)
.....+++++|+++|++++|||.+++-.. +...-..+...+|+|......++..-+.++...+-.+.. +++.|
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~------~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g 312 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQV------GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEG 312 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCCC------CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhC
Confidence 34456788999999999999998876432 123455677889997544444444444444444333322 23333
Q ss_pred C---CCEEEEEeec
Q 020887 155 L---YDIGIAAGLE 165 (320)
Q Consensus 155 ~---advvLv~G~E 165 (320)
+ -|.+|.+++.
T Consensus 313 ~~~~Gd~vll~~~G 326 (338)
T PRK09258 313 FLKPGDRVALLGIG 326 (338)
T ss_pred CCCCCCEEEEEEec
Confidence 3 2667766654
No 147
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=81.33 E-value=4.6 Score=39.35 Aligned_cols=81 Identities=14% Similarity=0.234 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHhCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAGLY 156 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~sG~a 156 (320)
...+++++|+++|++++|||.+++-.. ...+-..+...+|++......++..-+.++..++-.+.. .++.|+.
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~ 355 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA------NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKV 355 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcCCC
Confidence 345788899999999999998876432 123445678899997544445566666666666655554 3444443
Q ss_pred ---CEEEEEee
Q 020887 157 ---DIGIAAGL 164 (320)
Q Consensus 157 ---dvvLv~G~ 164 (320)
|.+|..|+
T Consensus 356 ~~Gd~vll~~~ 366 (379)
T PLN02326 356 KKGDVIATAGF 366 (379)
T ss_pred CCCCEEEEEEE
Confidence 56665544
No 148
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=80.47 E-value=7.7 Score=38.26 Aligned_cols=97 Identities=11% Similarity=0.054 Sum_probs=55.6
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
.++|+|.+.+..... .... -...+++.||+++||+++|||.+-+--.+ ........+.+|+.....
T Consensus 279 ~a~I~g~~~~~~~~~----~~~~----~~~~a~~~al~~Agl~~~DId~~ei~D~f------~~~~l~~~e~lg~~~~~~ 344 (401)
T PRK09050 279 RARILGMATAGVEPR----IMGI----GPAPATRKLLARLGLTIDQFDVIELNEAF------AAQGLAVLRQLGLADDDA 344 (401)
T ss_pred cEEEEEEEEeccCCc----cccc----hHHHHHHHHHHHcCCCHHHCCccccCcHh------HHHHHHHHHHcCCCCCCC
Confidence 478999877644321 1111 23578999999999999999977532111 111223346678732222
Q ss_pred eEEecCC--------CCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 130 LRTVNRQ--------CSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 130 ~~~v~~a--------CaSG~~Ai~~A~~~I~sG~advvL 160 (320)
.+..+.+ .++|..-+.+++..++-......|
T Consensus 345 pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~~~g~ 383 (401)
T PRK09050 345 RVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYAL 383 (401)
T ss_pred CEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 2333322 456666778888888754344443
No 149
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=80.06 E-value=6.9 Score=35.33 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchh----hHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA----MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV 147 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~----~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A 147 (320)
..-.+.....+.++|.++|++..|+|.|.++..-|+.. |- ..+.-++..+| .|.+.|+ .+.++...
T Consensus 35 r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFT-GlRIG~~~AkgLA~~l~----iplvgvs-----sL~~~A~~ 104 (220)
T COG1214 35 RNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFT-GLRIGVAFAKGLALALN----IPLVGVS-----SLEALAQG 104 (220)
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCccc-chhhHHHHHHHHHHHcC----CCEEEeC-----HHHHHHHh
Confidence 34568889999999999999999999999987644433 33 33444444444 4677773 44444433
Q ss_pred HHHHHhCCCCEEEE
Q 020887 148 ATAIKAGLYDIGIA 161 (320)
Q Consensus 148 ~~~I~sG~advvLv 161 (320)
.+......+++
T Consensus 105 ---~~~~~~~~v~v 115 (220)
T COG1214 105 ---GAEKNAGFVLV 115 (220)
T ss_pred ---hhccCCCceEE
Confidence 44444555555
No 150
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=79.96 E-value=3.6 Score=38.98 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHhCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAGLY 156 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~sG~a 156 (320)
...+++++|+++|++++|||.+++-.. .......+...+|+|.......+..-+.++...+-.+.. +++.|..
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~------~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~ 301 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQA------NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKI 301 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCC
Confidence 455788999999999999998876432 123455678899998544444555555555555544443 3345543
Q ss_pred ---CEEEEEee
Q 020887 157 ---DIGIAAGL 164 (320)
Q Consensus 157 ---dvvLv~G~ 164 (320)
|.++..++
T Consensus 302 ~~Gd~vll~~~ 312 (326)
T CHL00203 302 QPGQIIVLSGF 312 (326)
T ss_pred CCCCEEEEEEE
Confidence 45655543
No 151
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=79.64 E-value=8.5 Score=34.46 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHH-HHcCC---CCC-CCeEEecCCCCcHHHHHHHHH
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA-FYAGF---PET-VPLRTVNRQCSSGLQAVADVA 148 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va-~~lGl---~~~-~p~~~v~~aCaSG~~Ai~~A~ 148 (320)
..+...++++++|+++|++++|||.+++-....... ......+. ...+. +.. .....-+..++|+...+..+.
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~ 220 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIG--DAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELL 220 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccc--cHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHH
Confidence 346677899999999999999999887643322211 11111111 11111 000 111223456778888888888
Q ss_pred HHHHhC-------CCCEEEEEee
Q 020887 149 TAIKAG-------LYDIGIAAGL 164 (320)
Q Consensus 149 ~~I~sG-------~advvLv~G~ 164 (320)
..++.+ ..|.+++.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~~~ 243 (254)
T cd00327 221 LMLEHEFIPPTPREPRTVLLLGF 243 (254)
T ss_pred HHHhCCCcCCCCCCcCEEEEeeE
Confidence 888776 5677776544
No 152
>PRK06158 thiolase; Provisional
Probab=79.57 E-value=12 Score=36.47 Aligned_cols=52 Identities=12% Similarity=0.108 Sum_probs=32.7
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
.+.|+|.|.+..--.... ....+.. ..-...++++|+++|||+++|||.+-+
T Consensus 228 ~~~v~i~g~~~~~~~~~~-~~~~~~~-~~~~~~aa~~A~~~AGi~p~DId~~El 279 (384)
T PRK06158 228 RPPVYVLGAAAATWHRQI-SSMPDLT-VTAAAESGPRAFAMAGLTPADIDVVEL 279 (384)
T ss_pred CCcEEEEEEEEecCCccc-ccccchh-hhHHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 457999987754221100 0112222 233467999999999999999997643
No 153
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=79.07 E-value=14 Score=36.28 Aligned_cols=52 Identities=13% Similarity=0.039 Sum_probs=31.3
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCCCCcEEE
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN--PSEVGDIVV 101 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~--~~dID~vi~ 101 (320)
.++++|.|.+..--.... ...+.........|+++|++++||+ ++|||.+-+
T Consensus 230 ~~pv~I~g~g~~~~~~~~--~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei 283 (385)
T PRK06066 230 DDPVWIKGIGWSTESSNL--ETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEV 283 (385)
T ss_pred CCCEEEEEEEEecCCccc--ccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEE
Confidence 467899987763110000 0112222222347999999999997 689996643
No 154
>PRK04262 hypothetical protein; Provisional
Probab=78.63 E-value=3.2 Score=39.85 Aligned_cols=81 Identities=21% Similarity=0.158 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe--EEecC----CCCcHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL--RTVNR----QCSSGLQAVADVAT 149 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~--~~v~~----aCaSG~~Ai~~A~~ 149 (320)
.....+++++|+++|++++|||.+++-.. ...+-..+...+|+|..... +.+.. +++|-..++..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~ 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP------NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC------chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH
Confidence 56678899999999999999998876322 12344566788999743322 11233 33333445555444
Q ss_pred HHHhCCCCEEEEEee
Q 020887 150 AIKAGLYDIGIAAGL 164 (320)
Q Consensus 150 ~I~sG~advvLv~G~ 164 (320)
.++.| |.+|.+++
T Consensus 283 ~~~~G--d~vll~~~ 295 (347)
T PRK04262 283 VAKPG--DRILVVSF 295 (347)
T ss_pred hCCCC--CEEEEEec
Confidence 33344 66666553
No 155
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=78.50 E-value=6 Score=31.77 Aligned_cols=78 Identities=22% Similarity=0.297 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC---CCCeEEe-----cCCCCcHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE---TVPLRTV-----NRQCSSGLQAVADV 147 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~---~~p~~~v-----~~aCaSG~~Ai~~A 147 (320)
+-..+++++||+++|+++++||.|..- ..+.......-...+...++-.. ..+...+ ...+++|+..+..+
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~h-g~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAH-GTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeee-ccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHH
Confidence 444788999999999999999987642 22221101111223333343210 1222211 24678899999999
Q ss_pred HHHHHhC
Q 020887 148 ATAIKAG 154 (320)
Q Consensus 148 ~~~I~sG 154 (320)
...++.|
T Consensus 104 ~l~l~~~ 110 (119)
T PF02801_consen 104 LLALEHG 110 (119)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9888877
No 156
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=78.38 E-value=10 Score=37.00 Aligned_cols=98 Identities=11% Similarity=0.077 Sum_probs=54.6
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
...++|.|.+........ +...+.....-...+++.||+++||+++|||.+-+-..+ ....-...+.+||.+.
T Consensus 230 ~~~~~I~g~g~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~f------t~~~l~~le~lGl~~~ 302 (385)
T PRK12578 230 DSPVWITGIGYANDYAYV-ARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAF------TIAEIMGYEDLGFTEK 302 (385)
T ss_pred CCCeEEEEEEEecCcccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcC------hHHHHHHHHHcCCCCC
Confidence 356899998875322100 111222222234579999999999999999975432111 1112223356676321
Q ss_pred CC----------------eEEecC--------CCCcHHHHHHHHHHHHH
Q 020887 128 VP----------------LRTVNR--------QCSSGLQAVADVATAIK 152 (320)
Q Consensus 128 ~p----------------~~~v~~--------aCaSG~~Ai~~A~~~I~ 152 (320)
+. .+..+. ..+||+.-+.+++..++
T Consensus 303 G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLr 351 (385)
T PRK12578 303 GKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLR 351 (385)
T ss_pred CchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHh
Confidence 10 122222 23567888888888887
No 157
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=77.51 E-value=11 Score=37.07 Aligned_cols=97 Identities=12% Similarity=0.064 Sum_probs=54.9
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
..++|.|.+.+..... ... .-...+++.||+++||+++|||.+-+...+ ........+.+|+....
T Consensus 277 ~~~~I~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~DID~~ei~D~f------~~~~l~~~e~lG~~~~~ 342 (400)
T TIGR02430 277 PRARILAAATAGVEPR----IMG----IGPVPATQKLLARAGLSIDQFDVIELNEAF------AAQALAVLRELGLADDD 342 (400)
T ss_pred ccEEEEEEEEecCCCc----ccc----chHHHHHHHHHHHhCCCHHHCCCcccCcHH------HHHHHHHHHHcCCCCCC
Confidence 4588999776542211 111 123578899999999999999977532111 11122334667873222
Q ss_pred CeEEecCC--------CCcHHHHHHHHHHHHHhCCCCEE
Q 020887 129 PLRTVNRQ--------CSSGLQAVADVATAIKAGLYDIG 159 (320)
Q Consensus 129 p~~~v~~a--------CaSG~~Ai~~A~~~I~sG~advv 159 (320)
..+..+.+ .++|...+..++..++....++.
T Consensus 343 ~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g 381 (400)
T TIGR02430 343 ARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYA 381 (400)
T ss_pred CeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 22333322 35667777888888874333333
No 158
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=77.40 E-value=8.1 Score=36.23 Aligned_cols=81 Identities=12% Similarity=0.177 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHH-HHHHhCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAGLY 156 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~-~~I~sG~a 156 (320)
..++++++|+++|++++|||.+++-+. ....-..+...+|+|......++..-+..+...+-.+. .++.+|..
T Consensus 221 ~~~~~~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~~~~~ 294 (318)
T TIGR00747 221 MGDVVEETLEANGLDPEDIDWFVPHQA------NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLRTGRI 294 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHHcCCC
Confidence 456788899999999999998875322 23455677889999753333344332222322222222 23344432
Q ss_pred ---CEEEEEee
Q 020887 157 ---DIGIAAGL 164 (320)
Q Consensus 157 ---dvvLv~G~ 164 (320)
|.++.+++
T Consensus 295 ~~Gd~vll~~~ 305 (318)
T TIGR00747 295 KPGDLLLLVAF 305 (318)
T ss_pred CCCCEEEEEEE
Confidence 66666554
No 159
>PRK08256 lipid-transfer protein; Provisional
Probab=77.15 E-value=17 Score=35.54 Aligned_cols=99 Identities=16% Similarity=0.189 Sum_probs=54.6
Q ss_pred CCceEEEecccccccccCCCC--CCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGG--FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~--~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~ 125 (320)
...++|.|.+.+.......+. ..+.........+++.+++++|++++|||.+-+-..+ ....-...+.+||.
T Consensus 234 ~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f------~~~~l~~le~lg~~ 307 (391)
T PRK08256 234 DRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCF------SANELLTYEALGLC 307 (391)
T ss_pred CCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCC------cHHHHHHHHHcCCC
Confidence 456899986654321100000 0111122334579999999999999999976442211 11122334667764
Q ss_pred CCCC----------------eEEecC--------CCCcHHHHHHHHHHHHH
Q 020887 126 ETVP----------------LRTVNR--------QCSSGLQAVADVATAIK 152 (320)
Q Consensus 126 ~~~p----------------~~~v~~--------aCaSG~~Ai~~A~~~I~ 152 (320)
+.+. .+..+. .++||+.-+.+++..++
T Consensus 308 ~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 308 PEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 3211 122221 35678888888888887
No 160
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=76.62 E-value=16 Score=35.72 Aligned_cols=114 Identities=22% Similarity=0.175 Sum_probs=62.4
Q ss_pred ccccccCCC-CCCCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhH
Q 020887 36 GEAAGYHRK-PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAME 114 (320)
Q Consensus 36 ~~~~~~~~~-~~~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~ 114 (320)
||.++.-.. ......++|.|++.+-=+.. ....+.+. +-..+++++||+++|++++|||.+.. ...+.......-
T Consensus 222 gEGaa~vVLe~~~~~~~~I~g~g~~~d~~~--~~~~~~~~-~~~~~a~~~Al~~Agl~~~dId~v~~-hgtgt~~~D~~E 297 (392)
T PRK09185 222 GEAAAFFLLEREDDAAVALLGVGESSDAHH--MSAPHPEG-LGAILAMQQALADAGLAPADIGYINL-HGTATPLNDAME 297 (392)
T ss_pred eceEEEEEEEEcCCCcEEEEEEEEeCCCCC--CCCCCCCH-HHHHHHHHHHHHHcCCCHHHccEEEe-CCCCCcCCCHHH
Confidence 555544331 12344578888776532211 01112222 33358999999999999999998653 222211111222
Q ss_pred HHHHHHHcCCCCCCCe-----EEecCCCCcHHHHHHHHHHHHHhCC
Q 020887 115 CRMAAFYAGFPETVPL-----RTVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 115 a~~va~~lGl~~~~p~-----~~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
...+...+|- ..|. ..=+..+++|...+..++..++.|.
T Consensus 298 ~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 298 SRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred HHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHhcCC
Confidence 2334444552 1222 2234567888888888888888874
No 161
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=76.55 E-value=9.8 Score=36.64 Aligned_cols=88 Identities=9% Similarity=-0.040 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCCCeEE-----ecCCCCcHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETVPLRT-----VNRQCSSGLQAVADVAT 149 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~p~~~-----v~~aCaSG~~Ai~~A~~ 149 (320)
+=..+++++||+++|+++++||.|+.. ..+...........+...+|-. ...|... =+.+.++|...+..+..
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah-~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~ 312 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIAD-LNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALA 312 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcC-CCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHH
Confidence 445789999999999999999987642 2222211112222333334321 1122221 12345677777778888
Q ss_pred HHHhCCC--CEEEEEee
Q 020887 150 AIKAGLY--DIGIAAGL 164 (320)
Q Consensus 150 ~I~sG~a--dvvLv~G~ 164 (320)
.++.|.. +.+|+.+.
T Consensus 313 ~~~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 313 ASRKGYGPGPNVLCHLS 329 (348)
T ss_pred HHHcCcCCCCcEEEEec
Confidence 8898854 56776654
No 162
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=76.37 E-value=8.8 Score=37.85 Aligned_cols=78 Identities=10% Similarity=-0.045 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC-CCCeEEecCCCCcHHHHHHHHHHHHHhCC
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE-TVPLRTVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~-~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
-..++++.||++||| ++|||.|.. ...+.......-...+...++.|. ..-.+.=...+++|..-+..+..+|+.|.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~a-hgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~ 358 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVIS-GATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGA 358 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEe-CCCCCCCccHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCc
Confidence 457899999999999 799998753 222221111222333445556431 11122334457778888888888898885
Q ss_pred C
Q 020887 156 Y 156 (320)
Q Consensus 156 a 156 (320)
.
T Consensus 359 v 359 (398)
T PRK06519 359 L 359 (398)
T ss_pred c
Confidence 4
No 163
>PRK07937 lipid-transfer protein; Provisional
Probab=76.10 E-value=18 Score=34.96 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=57.2
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 126 (320)
.+.|+|.|.+...-.... + ..+... ..+++.++++ ||++++|||.+-+--.+ ....-...+.+|+..
T Consensus 224 ~~pv~I~g~~~~~~~~~~-~-~~d~~~----~~~~~~a~~~aAgi~~~diD~~Ei~D~F------~~~~l~~~e~lGl~g 291 (352)
T PRK07937 224 ERPAWITGIEHRIESPSL-G-ARDLTR----SPSTALAAEAATGGDAGGVDVAELHAPF------THQELILREALGLGD 291 (352)
T ss_pred CCcEEEEEEEEeeCCccc-c-cccccc----HHHHHHHHHHhcCCCHHHCCEEEEeCCC------hHHHHHHHHHcCCCC
Confidence 466999998764111000 0 112222 2333445555 59999999976432111 111223346777632
Q ss_pred CCCe------EEecCCCCcHHHHHHHHHHHHHhCCCCEEEEEe
Q 020887 127 TVPL------RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163 (320)
Q Consensus 127 ~~p~------~~v~~aCaSG~~Ai~~A~~~I~sG~advvLv~G 163 (320)
..|. ..-+-..++|..-+.+++.+|+-+.++++|+.+
T Consensus 292 ~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~ 334 (352)
T PRK07937 292 KTKVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA 334 (352)
T ss_pred CCCcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 1111 111122457888889999999988889888764
No 164
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=75.25 E-value=29 Score=34.04 Aligned_cols=50 Identities=16% Similarity=0.046 Sum_probs=33.1
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEE
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIV 100 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi 100 (320)
...|+|.|.+...-... ....+.. ......++++|++.|||+++|||.+-
T Consensus 230 ~~~v~I~g~~~~~~~~~--~~~~~~~-~~~~~~aa~~a~~~AGi~~~did~~e 279 (388)
T PRK08142 230 RPLVKVLGAGEAIKGQM--GGKVDLT-YSGAAWSGPAAFAEAGVTPADIKYAS 279 (388)
T ss_pred CCCEEEEEEEEecCCcc--ccCcccc-cHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45699999887532110 1112332 33446799999999999999999653
No 165
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.24 E-value=9.9 Score=37.16 Aligned_cols=102 Identities=14% Similarity=0.017 Sum_probs=54.8
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETV 128 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~ 128 (320)
.++|.|++.+.-+... . ..+.. .+-...++++||+++|++++|||.+..- ..+.......-...+...+|.. ...
T Consensus 253 ~a~I~g~~~~~d~~~~-~-~~~~~-~~~~~~a~~~Al~~agi~~~dId~v~~h-gtgt~~~d~~E~~al~~~~~~~~~~~ 328 (411)
T PRK07314 253 YAEVVGYGMTGDAYHM-T-APAPD-GEGAARAMKLALKDAGINPEDIDYINAH-GTSTPAGDKAETQAIKRVFGEHAYKV 328 (411)
T ss_pred EEEEEEEEEcCCCCCC-C-CCCCC-cHHHHHHHHHHHHHcCCCHHHCCEEEcc-ccCCccccHHHHHHHHHHhcccCCCC
Confidence 3678887766433210 0 11111 2224578999999999999999987532 1121111112222333444421 112
Q ss_pred CeE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 129 PLR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 129 p~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
+.. .=+..+++|...+..++..++.|.
T Consensus 329 ~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 329 AVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred eeECccchhchhHHHHHHHHHHHHHHHHhCCC
Confidence 221 122356788888888888888874
No 166
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=74.46 E-value=12 Score=36.36 Aligned_cols=100 Identities=18% Similarity=0.132 Sum_probs=54.5
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCC-CCC
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFP-ETV 128 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~-~~~ 128 (320)
++|.|++.+.-+... . ......+-...++++||+++||+++|||.+.+ ++..... ...-...+...+|-. ...
T Consensus 253 a~i~g~~~~~d~~~~-~--~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~--D~~E~~a~~~~~~~~~~~~ 327 (407)
T TIGR03150 253 AEIVGYGMSGDAYHI-T--APAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLG--DKAETKAIKRVFGDHAYKL 327 (407)
T ss_pred EEEEEEEECCCCCCC-C--CCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC--CHHHHHHHHHHhccCCCCC
Confidence 567887665433210 0 11111233568899999999999999998753 2222111 122222333444421 011
Q ss_pred CeE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 129 PLR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 129 p~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
|.. .-+..+++|...+..++.+++.|.
T Consensus 328 ~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ 359 (407)
T TIGR03150 328 AVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGV 359 (407)
T ss_pred ceeCCcchhchhHHHHHHHHHHHHHHHHhcCC
Confidence 221 123356788888888888888874
No 167
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=73.51 E-value=13 Score=36.42 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=56.6
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|.|.+.+.... .+. ..-...++++||+++||+++|||.+-+-..+ ........+.+|+. ..|
T Consensus 269 ~~i~g~g~~~~~~------~~~--~~~~~~a~~~a~~~Agi~~~did~~e~~d~f------a~~~~~~~e~lG~~-~~p- 332 (386)
T TIGR01930 269 ARIVSFAVAGVDP------EIM--GLGPVPAIPKALKKAGLSISDIDLFEINEAF------AAQVLACIKELGLD-LEK- 332 (386)
T ss_pred EEEEEEEEecCCC------ccc--cccHHHHHHHHHHHcCCCHHHCCeeehcchh------HHHHHHHHHHhCCC-hhh-
Confidence 6899877763211 111 1223589999999999999999977332111 11111223556652 111
Q ss_pred EEe--------cCCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 020887 131 RTV--------NRQCSSGLQAVADVATAIKAGLYDIGIA 161 (320)
Q Consensus 131 ~~v--------~~aCaSG~~Ai~~A~~~I~sG~advvLv 161 (320)
..+ ...+++|...+..++..++-...++.|+
T Consensus 333 vn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~ 371 (386)
T TIGR01930 333 VNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLA 371 (386)
T ss_pred cCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 111 1235678888899999998766777765
No 168
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=73.31 E-value=10 Score=35.68 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHH-HHHHHhCCC-
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV-ATAIKAGLY- 156 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A-~~~I~sG~a- 156 (320)
..+++++|+++|++++|||.+++-.. .......+...+|++......++..-+..+...+-.+ ..+++.|..
T Consensus 228 ~~~i~~~L~~~g~~~~did~~~~h~~------~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~~ 301 (325)
T PRK12879 228 PKGARQVLEKAGLTKDDIDWVIPHQA------NLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLALEQGKIK 301 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHHHHcCCCC
Confidence 46788999999999999998876432 1234557788999974333333333333333332222 234455543
Q ss_pred --CEEEEEee
Q 020887 157 --DIGIAAGL 164 (320)
Q Consensus 157 --dvvLv~G~ 164 (320)
|.+|.+++
T Consensus 302 ~Gd~vll~~~ 311 (325)
T PRK12879 302 PGDTLLLYGF 311 (325)
T ss_pred CCCEEEEEEE
Confidence 46665554
No 169
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=72.93 E-value=9.6 Score=35.58 Aligned_cols=83 Identities=19% Similarity=0.268 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHH-HHHHhC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG 154 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~-~~I~sG 154 (320)
+...++++++|+++|++++|||.+++-.. +...-..+...+|+|.......+..-+..+...+-... .+++.|
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~ 296 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA------NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEG 296 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHcC
Confidence 34567889999999999999998776432 22344567788999754433344333333433333333 334555
Q ss_pred C---CCEEEEEee
Q 020887 155 L---YDIGIAAGL 164 (320)
Q Consensus 155 ~---advvLv~G~ 164 (320)
. -|.+|..++
T Consensus 297 ~~~~G~~vll~~~ 309 (320)
T cd00830 297 KLKKGDLVLLLGF 309 (320)
T ss_pred CCCCCCEEEEEEE
Confidence 3 356666554
No 170
>PRK07855 lipid-transfer protein; Provisional
Probab=72.71 E-value=27 Score=34.22 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=32.6
Q ss_pred CCceEEEecccccccccC--C-CCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 48 DDDVVIVAAYRTAICKAK--R-GGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~--~-g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
.+.|+|.|.+..--.... . ....+.........++++|++++||+++|||.+-+
T Consensus 235 ~~pv~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El 291 (386)
T PRK07855 235 QRPAVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAIL 291 (386)
T ss_pred CCCEEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEe
Confidence 467999998753211100 0 00122222233457999999999999999997643
No 171
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=72.70 E-value=17 Score=35.92 Aligned_cols=96 Identities=9% Similarity=0.046 Sum_probs=54.8
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
.++|+|++...... .... .-...+++.||+++||+++|||.+-+--.+ ....-...+.+|+.....
T Consensus 278 ~a~I~g~~~~~~~p-------~~~~-~~~~~A~~~al~~AGl~~~DID~iei~daf------a~~~l~~~e~lg~~~~~~ 343 (400)
T PRK13359 278 RARVLGIATAGVEP-------RVMG-IGPAPATQKLLARLGMTLDQFDVIELNEAF------ASQGLAVLRELGLADDDA 343 (400)
T ss_pred cEEEEEEEEecCCC-------Cccc-hhHHHHHHHHHHHhCCCHHHcCcCccCcHh------HHHHHHHHHHcCCCCCCC
Confidence 48899977763221 1111 223688999999999999999977531111 011222335677731112
Q ss_pred eEEecCC--------CCcHHHHHHHHHHHHHhCCCCEE
Q 020887 130 LRTVNRQ--------CSSGLQAVADVATAIKAGLYDIG 159 (320)
Q Consensus 130 ~~~v~~a--------CaSG~~Ai~~A~~~I~sG~advv 159 (320)
.+..+.+ .++|..-+..++..++.......
T Consensus 344 pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~~~g 381 (400)
T PRK13359 344 RVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFA 381 (400)
T ss_pred CEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCCCeE
Confidence 3333332 45677788888888875333333
No 172
>PRK06840 hypothetical protein; Validated
Probab=72.28 E-value=12 Score=35.55 Aligned_cols=43 Identities=12% Similarity=0.214 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE 126 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~ 126 (320)
..++++++|+++|++++|||.+++-.. ...+-..+...+|+|.
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~~------~~~~~~~~~~~Lgl~~ 281 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILHM------KRSAHIALLEGLGLTE 281 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCc------CHHHHHHHHHHcCCCH
Confidence 457889999999999999998765322 1233456788999974
No 173
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=71.77 E-value=44 Score=33.21 Aligned_cols=102 Identities=11% Similarity=0.018 Sum_probs=52.9
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC---
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE--- 126 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~--- 126 (320)
-+.|.|.+.+.-+... .......+-...++++||+++||+++|||.+.+- ..+.......-...+...+|-..
T Consensus 276 ~a~I~g~~~~~d~~~~---~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~h-gtgt~~~D~~E~~ai~~~~~~~~~~~ 351 (437)
T PLN02836 276 YAEVRGYGMSGDAHHI---TQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAH-ATSTPLGDAVEARAIKTVFSEHATSG 351 (437)
T ss_pred EEEEEeeeecCCCCCC---cCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEcc-CCcCcCcCHHHHHHHHHHhcccccCC
Confidence 4678887765443210 1111123445678999999999999999977432 11111111111222333333100
Q ss_pred CCCeE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 127 TVPLR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 127 ~~p~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
..|.. .=+...++|...+..++.+++.|.
T Consensus 352 ~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ 385 (437)
T PLN02836 352 GLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGI 385 (437)
T ss_pred CCeeECCcccccccHHHHHHHHHHHHHHHHhcCc
Confidence 11111 112345667777777777888773
No 174
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=70.98 E-value=42 Score=32.91 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=53.8
Q ss_pred CceEEEecccccccccCCCC----CCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCC
Q 020887 49 DDVVIVAAYRTAICKAKRGG----FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~----~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl 124 (320)
..++|.|.+........... ..+.........|++.|++++||+++|||.+-+--.+. ...-...+.+||
T Consensus 245 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa------~~~l~~le~lGl 318 (403)
T PRK06289 245 PIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFT------PSEYLAIDHIGL 318 (403)
T ss_pred CCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccch------HHHHHHHHHcCC
Confidence 34899998865321100000 00111223356799999999999999999764422211 112223456676
Q ss_pred CCC--------------CCeEEecC----------CCCcHHHHHHHHHHHHH
Q 020887 125 PET--------------VPLRTVNR----------QCSSGLQAVADVATAIK 152 (320)
Q Consensus 125 ~~~--------------~p~~~v~~----------aCaSG~~Ai~~A~~~I~ 152 (320)
.++ .-.+.+|. ..++|+.-+.+++..++
T Consensus 319 ~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLr 370 (403)
T PRK06289 319 TGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVT 370 (403)
T ss_pred CCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHh
Confidence 421 11112221 24678888888888887
No 175
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=70.21 E-value=11 Score=36.47 Aligned_cols=80 Identities=5% Similarity=0.006 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe-EEecCCCCcHHHHHHHHHH-HHHhC
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL-RTVNRQCSSGLQAVADVAT-AIKAG 154 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~-~~v~~aCaSG~~Ai~~A~~-~I~sG 154 (320)
....+++++|+++|++++|||.+++-.. ...+-..+...+|+|...-. ..+..-+.++..+|-.+.. .+..|
T Consensus 243 ~~~~~i~~~L~~~gl~~~did~~v~HQ~------~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~ 316 (353)
T PRK12880 243 CEPKSFKEILEFSKVDEKDIAFHLFHQS------NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPK 316 (353)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcC
Confidence 3356888999999999999998876322 22345567889999754432 2345555666666655554 44568
Q ss_pred CCCEEEEE
Q 020887 155 LYDIGIAA 162 (320)
Q Consensus 155 ~advvLv~ 162 (320)
+.+++|++
T Consensus 317 ~~~~ll~~ 324 (353)
T PRK12880 317 EFKASLSA 324 (353)
T ss_pred CcEEEEEE
Confidence 88766554
No 176
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=70.05 E-value=4.1 Score=39.09 Aligned_cols=83 Identities=18% Similarity=0.222 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHH-HHHh
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKA 153 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~-~I~s 153 (320)
..+...+.+++|+.+|++++|||-++.-... ..+-..++..+|+|......+++.-..++..+|-.+.. .++.
T Consensus 222 v~~~~~~~~~~L~~~~l~~~dId~~vpHQan------~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~~ 295 (323)
T COG0332 222 VRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN------LRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALRE 295 (323)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEcccccc------HHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhhh
Confidence 4566788999999999999999988764332 23445677899998777777777666666666666554 4455
Q ss_pred CCC---CEEEEEe
Q 020887 154 GLY---DIGIAAG 163 (320)
Q Consensus 154 G~a---dvvLv~G 163 (320)
|+. |.+|..+
T Consensus 296 g~ik~Gd~ill~~ 308 (323)
T COG0332 296 GRIKPGDLVLLEA 308 (323)
T ss_pred CCCCCCCEEEEEe
Confidence 544 4555444
No 177
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=69.40 E-value=5.9 Score=35.08 Aligned_cols=65 Identities=25% Similarity=0.360 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchh----hHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHH
Q 020887 72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA----MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD 146 (320)
Q Consensus 72 ~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~----~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~ 146 (320)
..-.+.....++++|+++|++++|||.+.++..-++. .|- ..++-++..++ +|.+.+ +.+.++..
T Consensus 31 ~~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSf-TGlRig~~~akgla~~~~----~p~~~v-----ssL~~lA~ 99 (202)
T TIGR03725 31 RNHSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSF-TGLRIGLATAKGLALALG----IPLVGV-----SSLEALAA 99 (202)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChH-HhHHHHHHHHHHHHHHhC----CCEEec-----CHHHHHHh
Confidence 3456888889999999999999999999887553332 232 23444444444 456666 34555543
No 178
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=68.30 E-value=53 Score=32.26 Aligned_cols=49 Identities=10% Similarity=0.010 Sum_probs=31.4
Q ss_pred CceEEEecccc---cccccCCCCCCCCCHHHH--HHHHHHHHHHHcCCC--CCCCCcEEE
Q 020887 49 DDVVIVAAYRT---AICKAKRGGFKDTLADDL--LAPVLKAVIEKTRLN--PSEVGDIVV 101 (320)
Q Consensus 49 ~~v~IvG~g~T---p~~r~~~g~~~~~s~~eL--a~~A~~~AL~dAGl~--~~dID~vi~ 101 (320)
..|+|.|++.. .+... ....++..+ ...+++.|++++||+ ++|||.+-+
T Consensus 238 ~~v~I~g~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei 293 (398)
T PRK06157 238 DPVYVKALQLAVSNGWELQ----YNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEV 293 (398)
T ss_pred CCeEEEEEEEecccccccc----cccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEE
Confidence 78999998664 22110 111222222 567899999999997 699996543
No 179
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=68.14 E-value=27 Score=33.82 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCCCeE-----EecCCCCcHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETVPLR-----TVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~p~~-----~v~~aCaSG~~Ai~~A~~ 149 (320)
+-...++++||+++|++++|||.+..-. .+.......-...+...++-. ...+.. .-+..+++|...+..++.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~-tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~ 353 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHG-TSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLL 353 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccc-ccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHH
Confidence 4456789999999999999999776422 222111122223333344431 111221 123468899999999999
Q ss_pred HHHhCC
Q 020887 150 AIKAGL 155 (320)
Q Consensus 150 ~I~sG~ 155 (320)
+++.|.
T Consensus 354 ~l~~~~ 359 (406)
T cd00834 354 ALRDGV 359 (406)
T ss_pred HHhcCC
Confidence 999984
No 180
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=67.94 E-value=26 Score=33.81 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=53.9
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
-+.|.|++.+--+... . ......+-...++++||+++||+++|||.|.. |+..... ...-...+...+|-....
T Consensus 183 ~a~I~g~~~~~d~~~~-~--~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~--D~~E~~Ai~~~fg~~~~~ 257 (342)
T PRK14691 183 LAEIVGYGTSADAYHM-T--SGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG--DLGEINAIKHLFGESNAL 257 (342)
T ss_pred eEEEEEEEEEcCCCCC-C--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC--CHHHHHHHHHHhCCCCCc
Confidence 3667787665433210 0 11223455678999999999999999997643 2222111 122233444555521112
Q ss_pred CeE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 129 PLR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 129 p~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
|.. .=...+++|...+..++..++.|.
T Consensus 258 ~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ 289 (342)
T PRK14691 258 AITSTKSATGHLLGAAGGLETIFTVLALRDQI 289 (342)
T ss_pred eEECCcccccCCcchhhHHHHHHHHHHHhCCc
Confidence 221 112245666666666666777764
No 181
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=67.47 E-value=1.6 Score=42.88 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHH-----------HHHHHHHHCC
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESH-----------RRAAAATASG 231 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~-----------~~Aa~n~~ag 231 (320)
..+++||++|+++.++++.+|++++ .|+.+||.++
T Consensus 160 ~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~ 205 (392)
T PRK07108 160 GISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATG 205 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccC
Confidence 5689999999999999999999955 5999999775
No 182
>PRK09051 beta-ketothiolase; Provisional
Probab=67.25 E-value=28 Score=34.17 Aligned_cols=92 Identities=10% Similarity=0.024 Sum_probs=53.1
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|.|.+...... .... .-...|+++||+++||+++|||.+-+- .. + ........+.+|+.. . .
T Consensus 275 ~~I~g~~~~~~~~-------~~~~-~~~~~a~~~al~~agi~~~did~~ei~---d~-f--~~~~~~~~e~lg~~~-~-~ 338 (394)
T PRK09051 275 ARLVGYAHAGVDP-------EYMG-IGPVPATQKALERAGLTVADLDVIEAN---EA-F--AAQACAVTRELGLDP-A-K 338 (394)
T ss_pred EEEEEEEEeccCC-------Cccc-ccHHHHHHHHHHHcCCCHHHcCEEEec---Cc-c--HHHHHHHHHHhCCCc-c-c
Confidence 5898877765322 1111 223678899999999999999977541 11 1 112223345677631 1 1
Q ss_pred EEec--------CCCCcHHHHHHHHHHHHHhCCCCE
Q 020887 131 RTVN--------RQCSSGLQAVADVATAIKAGLYDI 158 (320)
Q Consensus 131 ~~v~--------~aCaSG~~Ai~~A~~~I~sG~adv 158 (320)
+.++ -.++||..-+..++..++......
T Consensus 339 vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~~~ 374 (394)
T PRK09051 339 VNPNGSGISLGHPVGATGAIITVKALYELQRIGGRY 374 (394)
T ss_pred cCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCCCE
Confidence 1111 236677777888888887533333
No 183
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=66.93 E-value=27 Score=34.03 Aligned_cols=51 Identities=4% Similarity=-0.121 Sum_probs=32.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
..++|.|.+..--.... ....... ..-...++++|++++||+++|||.+-+
T Consensus 235 ~~v~i~g~~~~~~~~~~-~~~~~~~-~~~~~~a~~~a~~~agl~~~did~~e~ 285 (389)
T PRK07516 235 RAVRFRARAHVNDFLPL-SRRDPLA-FEGPRRAWQRALAQAGVTLDDLSFVET 285 (389)
T ss_pred CCEEEEEEEeccCcccc-cCCCccc-cHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 57999997765221100 0111112 244457999999999999999997643
No 184
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=65.62 E-value=27 Score=34.21 Aligned_cols=97 Identities=18% Similarity=0.100 Sum_probs=54.4
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
..|.|++.+--+.. ...+ .+=...++++||+++|+++++||.|... ..+.......-...+...+|- ...|.
T Consensus 251 a~i~g~~~~~d~~~-----~~~~-~~~~~~a~~~al~~ag~~~~~i~~v~~h-gtgt~~~D~~E~~al~~~fg~-~~~pv 322 (399)
T cd00832 251 GEIAGYAATFDPPP-----GSGR-PPGLARAIRLALADAGLTPEDVDVVFAD-AAGVPELDRAEAAALAAVFGP-RGVPV 322 (399)
T ss_pred EEEEeEEEcCCCCC-----CCCC-HHHHHHHHHHHHHHcCCCHHHccEEEec-cCcCCCCCHHHHHHHHHHhCC-CCCce
Confidence 35667665433321 1112 3445688999999999999999977532 222221112223334445553 12232
Q ss_pred E-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 131 R-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 131 ~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
. .=...+++|...+..+..+++.|.
T Consensus 323 ~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ 352 (399)
T cd00832 323 TAPKTMTGRLYAGGAPLDVATALLALRDGV 352 (399)
T ss_pred eCCCchhcchHHHHHHHHHHHHHHHHhCCC
Confidence 2 122346777777777777888774
No 185
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=64.85 E-value=20 Score=34.86 Aligned_cols=96 Identities=9% Similarity=-0.010 Sum_probs=54.1
Q ss_pred Cce-EEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDV-VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v-~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
+++ .|+|.+.+.... ... ..-...+++++|+++||+++|||.+.+-..+ ....-...+.+|++..
T Consensus 238 ~p~~~i~~~~~~~~~~-------~~~-~~~~~~a~~~al~~Agl~~~Did~~ei~eaf------a~~~~~~~e~lgl~~~ 303 (361)
T PRK06690 238 KPVLRFVRSAVVGVDP-------NLP-GTGPIFAVNKLLNEMNMKVEDIDYFEINEAF------ASKVVACAKELQIPYE 303 (361)
T ss_pred CceEEEEEEEEeccCc-------ccc-hhHHHHHHHHHHHHcCCCHHHcCEeeecchh------HHHHHHHHHhcCCCch
Confidence 444 588766543321 111 2345678999999999999999987552211 1112233466787422
Q ss_pred CCeEE------ecCCCCcHHHHHHHHHHHHHhCCCCE
Q 020887 128 VPLRT------VNRQCSSGLQAVADVATAIKAGLYDI 158 (320)
Q Consensus 128 ~p~~~------v~~aCaSG~~Ai~~A~~~I~sG~adv 158 (320)
..... .+-..++|...+..++..++.-....
T Consensus 304 ~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~~~ 340 (361)
T PRK06690 304 KLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMKY 340 (361)
T ss_pred hcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCCCE
Confidence 11111 23346677777777777776433333
No 186
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=64.38 E-value=38 Score=33.48 Aligned_cols=89 Identities=15% Similarity=0.094 Sum_probs=50.2
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
..++|+|++....... .....+ ..++++||+++||+++|||.+-+-..+ ....-...+.+|+..
T Consensus 281 p~a~I~g~~~~~~~~~----~~~~~~----~~a~~~al~~AGl~~~DID~~ei~daF------a~~~l~~~e~lG~~~-- 344 (402)
T PRK08242 281 PRARIVATATIGSDPT----IMLTGP----VPATRKALAKAGLTVDDIDLFELNEAF------ASVVLRFMQALDIPH-- 344 (402)
T ss_pred CcEEEEEEEEecCCch----hhcccH----HHHHHHHHHHcCCCHHHCCEEEecchh------hHHHHHHHHHhCCCC--
Confidence 4588998766533211 111111 469999999999999999977542111 111122346677742
Q ss_pred CeEEecC--------CCCcHHHHHHHHHHHHHh
Q 020887 129 PLRTVNR--------QCSSGLQAVADVATAIKA 153 (320)
Q Consensus 129 p~~~v~~--------aCaSG~~Ai~~A~~~I~s 153 (320)
..+.++. ..+||..-+...+..++.
T Consensus 345 ~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~ 377 (402)
T PRK08242 345 DKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377 (402)
T ss_pred cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence 1122222 256666666666777754
No 187
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=64.18 E-value=35 Score=33.10 Aligned_cols=84 Identities=13% Similarity=0.195 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC----CCCC-----eEEecCCCCcHHHHHH
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP----ETVP-----LRTVNRQCSSGLQAVA 145 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~----~~~p-----~~~v~~aCaSG~~Ai~ 145 (320)
.+-...++++||+++|++++|||.+.+-.. +.......-...+...++-. ...+ ...-+...++|...+.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgt-gt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGT-GTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCC-CCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 455568999999999999999998754322 21111111122223333210 0111 1222345677888888
Q ss_pred HHHHHHHhCCCCEE
Q 020887 146 DVATAIKAGLYDIG 159 (320)
Q Consensus 146 ~A~~~I~sG~advv 159 (320)
.++..++.|...-.
T Consensus 357 ~~~~~l~~~~ip~~ 370 (421)
T cd00833 357 KVVLALEHGVIPPN 370 (421)
T ss_pred HHHHHHhcCCcCCc
Confidence 88888998865543
No 188
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=63.96 E-value=21 Score=33.37 Aligned_cols=44 Identities=23% Similarity=0.271 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
..++++++|+++|++++|||.+++-+. ....-..+...+|+|..
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lg~~~~ 264 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQA------NLRIIDATAKKLGLPME 264 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHH
Confidence 456888999999999999998875322 22345567788999753
No 189
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=63.79 E-value=36 Score=33.59 Aligned_cols=99 Identities=8% Similarity=-0.012 Sum_probs=55.1
Q ss_pred EEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCC--CC
Q 020887 52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFP--ET 127 (320)
Q Consensus 52 ~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~--~~ 127 (320)
.|.|++.+.-+... . ......+-...++++||++ +||+++|||.+.+ |+..... ...-...+...+|-. ..
T Consensus 262 ~i~g~~~~~d~~~~-~--~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~--D~~E~~al~~~~~~~~~~~ 336 (421)
T PTZ00050 262 EIRGYGSSSDAHHI-T--APHPDGRGARRCMENALKDGANININDVDYVNAHATSTPIG--DKIELKAIKKVFGDSGAPK 336 (421)
T ss_pred EEEEEEEcCCCCCC-C--CCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC--CHHHHHHHHHHhccccCCC
Confidence 57777665433210 0 1111234567889999999 9999999998753 2221111 111122334444421 11
Q ss_pred CCe-----EEecCCCCcHHHHHHHHHHHHHhCC
Q 020887 128 VPL-----RTVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 128 ~p~-----~~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
.+. ..=...+++|...+..+...++.|.
T Consensus 337 ~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ 369 (421)
T PTZ00050 337 LYVSSTKGGLGHLLGAAGAVESIVTILSLYEQI 369 (421)
T ss_pred ceEECccccccccHHHHHHHHHHHHHHHHHcCc
Confidence 122 2223457788888888888888874
No 190
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=63.63 E-value=23 Score=34.59 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=55.8
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
+.|.|++.+--+... . ..+. ..+-...++++||+++||+++|||.+.. |+..... ...-...+...+|- ..|
T Consensus 232 a~I~g~~~~~d~~~~-~-~~~~-~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~--D~~E~~al~~~fg~--~~~ 304 (381)
T PRK05952 232 GQILGFGLTCDAYHM-S-APEP-DGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN--DQREANLIQALFPH--RVA 304 (381)
T ss_pred EEEEEEEecCCCCCC-C-CCCC-CHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC--cHHHHHHHHHHcCC--CCe
Confidence 467787765433210 0 1112 2355688999999999999999998753 2222111 11122233444441 222
Q ss_pred eE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 130 LR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 130 ~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
.. .=+..+++|...+..+...++.|.
T Consensus 305 v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ 335 (381)
T PRK05952 305 VSSTKGATGHTLGASGALGVAFSLLALRHQQ 335 (381)
T ss_pred eecchhhhccChHHHHHHHHHHHHHHHhcCc
Confidence 21 222446777888888888888875
No 191
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=63.15 E-value=5.6 Score=39.22 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=26.8
Q ss_pred CCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 291 s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
-.+++||+++||.+++.|++.|.++.++|+
T Consensus 229 ~v~gEGa~~~vLe~~~~A~~rga~i~a~i~ 258 (405)
T PRK09116 229 LVIGEGAGTLVLEELEHAKARGATIYAEIV 258 (405)
T ss_pred EeeeccEEEEEEccHHHHHhCCCceEEEEE
Confidence 456999999999999999999999998873
No 192
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=63.00 E-value=45 Score=32.69 Aligned_cols=94 Identities=14% Similarity=0.001 Sum_probs=54.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV 128 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~ 128 (320)
..++|+|.+..... +.....-...+++.||+++||+++|||.+-+-..+. ...-...+.+|++..
T Consensus 266 p~~~i~g~~~~~~~--------~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~------~~~l~~~e~lg~~~~- 330 (387)
T PRK07850 266 PRARIVAQALVGAE--------PYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFA------SVVLSWAQVHEPDMD- 330 (387)
T ss_pred CcEEEEEEEEeccC--------chhhcchHHHHHHHHHHHcCCCHHHcCeeeecccch------HHHHHHHHHcCCCCC-
Confidence 34899997753211 111123346899999999999999999765421111 111122356676321
Q ss_pred CeEEec--------CCCCcHHHHHHHHHHHHHhCCCCE
Q 020887 129 PLRTVN--------RQCSSGLQAVADVATAIKAGLYDI 158 (320)
Q Consensus 129 p~~~v~--------~aCaSG~~Ai~~A~~~I~sG~adv 158 (320)
.+.++ -..+||..-+.+++..++......
T Consensus 331 -pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~ 367 (387)
T PRK07850 331 -KVNVNGGAIALGHPVGSTGARLITTALHELERTDKST 367 (387)
T ss_pred -CcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCCCe
Confidence 11111 235678888888898886543333
No 193
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.13 E-value=31 Score=33.86 Aligned_cols=79 Identities=10% Similarity=0.037 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeE-----EecCCCCcHHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-----TVNRQCSSGLQAVADVATA 150 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~-----~v~~aCaSG~~Ai~~A~~~ 150 (320)
+-...++++||+++||+++|||.|..- ..+.......-...+...+|-....+.. .=+..+++|...+..++.+
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~h-gtgt~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~ 366 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAH-ATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILA 366 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecc-CCCCccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHH
Confidence 456788999999999999999987532 1221110111123334444411111211 1122456777777777888
Q ss_pred HHhCC
Q 020887 151 IKAGL 155 (320)
Q Consensus 151 I~sG~ 155 (320)
++.|.
T Consensus 367 l~~g~ 371 (424)
T PRK06333 367 LRDQI 371 (424)
T ss_pred HhcCC
Confidence 88874
No 194
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=61.00 E-value=6.8 Score=36.38 Aligned_cols=56 Identities=16% Similarity=0.236 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC---chhhHHHHHHHHcCCCCCCCeEEec
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS---TRAMECRMAAFYAGFPETVPLRTVN 134 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~---~~~~~a~~va~~lGl~~~~p~~~v~ 134 (320)
.+.....++++|+++|++++|||.|.++..-+... -+...+..++..++ .|.+.|+
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 57778899999999999999999998876533221 11234455555555 4677774
No 195
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=60.85 E-value=37 Score=33.02 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCCCe-----EEecCCCCcHHHHHHHHH
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETVPL-----RTVNRQCSSGLQAVADVA 148 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~p~-----~~v~~aCaSG~~Ai~~A~ 148 (320)
.+-...++++||+++|++++|||.|..- ..+.......-...+...++-. ...|. ..-+..+++|...+..+.
T Consensus 273 ~~~~~~a~~~Al~~Agi~~~dId~i~~h-gtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~ 351 (407)
T cd00828 273 GKGIARAIRTALAKAGLSLDDLDVISAH-GTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGAL 351 (407)
T ss_pred hHHHHHHHHHHHHHcCCCHHHcCEEecc-cccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHH
Confidence 3556788999999999999999977532 2222111111222233333320 01122 222345677788888888
Q ss_pred HHHHhCC
Q 020887 149 TAIKAGL 155 (320)
Q Consensus 149 ~~I~sG~ 155 (320)
..++.|.
T Consensus 352 ~~l~~~~ 358 (407)
T cd00828 352 QSLEHGL 358 (407)
T ss_pred HHHhcCc
Confidence 8888864
No 196
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=60.68 E-value=33 Score=33.14 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
.+..+++++|+++|++++|||.+++
T Consensus 272 ~~~~~i~~~L~~~gl~~~dId~~~~ 296 (372)
T PRK07515 272 MVAEHIVEHLAENGLTPADVKRFWL 296 (372)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4678899999999999999998875
No 197
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=60.53 E-value=44 Score=32.63 Aligned_cols=82 Identities=13% Similarity=0.205 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC----CCCCe-----EEecCCCCcHHHHHH
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP----ETVPL-----RTVNRQCSSGLQAVA 145 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~----~~~p~-----~~v~~aCaSG~~Ai~ 145 (320)
.+....++++||+++|++++|||.+..-. .+.......-...+...+|.. ...|. ..=+..+++|...+.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~-tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~ 356 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHG-TGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLI 356 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeC-CCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHH
Confidence 45557899999999999999999875422 121110111122333344321 01111 112334678888888
Q ss_pred HHHHHHHhCCCC
Q 020887 146 DVATAIKAGLYD 157 (320)
Q Consensus 146 ~A~~~I~sG~ad 157 (320)
.+...++.|..-
T Consensus 357 ~~~~~l~~~~ip 368 (424)
T smart00825 357 KVVLALRHGTIP 368 (424)
T ss_pred HHHHHHhCCCCC
Confidence 888889888543
No 198
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=60.50 E-value=38 Score=33.34 Aligned_cols=94 Identities=11% Similarity=0.100 Sum_probs=51.3
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|+|.+.+.... ..... -...|+++||+++||+++|||.+-+.-.+ ........+.+|+.. .|.
T Consensus 280 a~i~g~~~~~~~~-------~~~~~-~~~~A~~~al~~Agi~~~did~~ei~D~f------~~~~l~~~e~lg~~~-~~v 344 (399)
T PRK09052 280 ARFVSFAVAGVPP-------EIMGI-GPIEAIPAALKQAGLKQDDLDWIELNEAF------AAQSLAVIRDLGLDP-SKV 344 (399)
T ss_pred EEEEEEEEeccCC-------Cccch-hHHHHHHHHHHHcCCCHHHcCEEEeCcHH------HHHHHHHHHHhCCCC-ccc
Confidence 4899987764321 11111 33689999999999999999977532110 111222345677631 111
Q ss_pred ------EEe-cCCCCcHHHHHHHHHHHHHhCCCCEE
Q 020887 131 ------RTV-NRQCSSGLQAVADVATAIKAGLYDIG 159 (320)
Q Consensus 131 ------~~v-~~aCaSG~~Ai~~A~~~I~sG~advv 159 (320)
... +-..++|..-+...+..++.......
T Consensus 345 N~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~~~g 380 (399)
T PRK09052 345 NPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYG 380 (399)
T ss_pred CCCCchhhcCchHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 111 11245566666666666665434433
No 199
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=59.83 E-value=21 Score=35.40 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=54.0
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCC-C--
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFP-E-- 126 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~-~-- 126 (320)
.-|+|++.|-=+.. ..... ..-+=+..+.+.||+++||+++|||.+.. |+..+.. ...-...+...+|-. .
T Consensus 254 aei~G~g~~~Da~h-~t~P~--p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n--D~~E~~ai~~vfg~~~~~~ 328 (412)
T COG0304 254 AEIVGYGTTSDAYH-ITAPA--PDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN--DKAESLAIKRVFGEHAKSL 328 (412)
T ss_pred EEEEEEEecccccc-cCCCC--CCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc--cHHHHHHHHHHhcccccCc
Confidence 55667666654321 11111 11344568999999999999999998753 2222221 122233333444510 0
Q ss_pred ---CCCeEEecCCCCcHHHHHHHHHHHHHhCC
Q 020887 127 ---TVPLRTVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 127 ---~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
..-.++=....++|..-...+...|+.|.
T Consensus 329 ~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ 360 (412)
T COG0304 329 PVSSTKSLTGHTLGAAGAVEAIISLLALRDGI 360 (412)
T ss_pred eeeecccccccChhhHHHHHHHHHHHHHhcCC
Confidence 11223334456666666667777777663
No 200
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.59 E-value=56 Score=32.23 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE-EeecCCCCchhhHHHHHHHHcCCC--CCCCeE-----EecCCCCcHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVV-GTVLAPGSTRAMECRMAAFYAGFP--ETVPLR-----TVNRQCSSGLQAVADV 147 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~-g~~~~~~~~~~~~a~~va~~lGl~--~~~p~~-----~v~~aCaSG~~Ai~~A 147 (320)
+-...++++||+++||+++|||.+.. |+..... ...-...+...+|-. ...|.. .=+..+++|...+..+
T Consensus 278 ~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~--D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~ 355 (414)
T PRK08722 278 SGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG--DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIIT 355 (414)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC--CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHH
Confidence 44578899999999999999997743 2222211 122233344444421 112222 1233467788888888
Q ss_pred HHHHHhCC
Q 020887 148 ATAIKAGL 155 (320)
Q Consensus 148 ~~~I~sG~ 155 (320)
+.+++.|.
T Consensus 356 ~l~l~~~~ 363 (414)
T PRK08722 356 VMSLVDQI 363 (414)
T ss_pred HHHHhcCc
Confidence 88888874
No 201
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=59.31 E-value=26 Score=36.08 Aligned_cols=77 Identities=10% Similarity=0.100 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe-----EEecCCCCcHHHHHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL-----RTVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~-----~~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
...++++||+++||+++|||.|.. ...+.......-...+...+|-....|. +.=...+++|...+..+..+|+
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyIna-HGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~ 485 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINA-HATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIR 485 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEc-cCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHh
Confidence 457899999999999999997742 2222111111122233444542111122 2223457788888888888999
Q ss_pred hCC
Q 020887 153 AGL 155 (320)
Q Consensus 153 sG~ 155 (320)
.|.
T Consensus 486 ~g~ 488 (540)
T PLN02787 486 TGW 488 (540)
T ss_pred cCC
Confidence 885
No 202
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=56.91 E-value=49 Score=32.46 Aligned_cols=95 Identities=9% Similarity=0.038 Sum_probs=52.6
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC---
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET--- 127 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~--- 127 (320)
++|+|.+...... .... .-...+++.||+++||+++|||.+-+.-.+ ....-...+.+|+...
T Consensus 272 ~~i~g~~~~~~~~-------~~~~-~~~~~a~~~al~~agl~~~did~~ei~d~f------~~~~l~~~e~lg~~~~~vN 337 (391)
T PRK07661 272 AKFRSFAVAGVPP-------EVMG-IGPIAAIPKALKLAGLELSDIGLFELNEAF------ASQSIQVIRELGLDEEKVN 337 (391)
T ss_pred EEEEEEEEecCCC-------cccc-hHHHHHHHHHHHHcCCCHHHCCEEEeCCHH------HHHHHHHHHHcCCCCCCCC
Confidence 4888877764321 1111 234689999999999999999977642111 0111122346776311
Q ss_pred --CCeEE-ecCCCCcHHHHHHHHHHHHHhCCCCEE
Q 020887 128 --VPLRT-VNRQCSSGLQAVADVATAIKAGLYDIG 159 (320)
Q Consensus 128 --~p~~~-v~~aCaSG~~Ai~~A~~~I~sG~advv 159 (320)
+.... -+-..+||..-+.+.+..++.-.....
T Consensus 338 ~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~~~g 372 (391)
T PRK07661 338 VNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFG 372 (391)
T ss_pred CCCChHHhCCcHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 11111 112356777777777777764333333
No 203
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=56.45 E-value=1.1e+02 Score=29.81 Aligned_cols=50 Identities=10% Similarity=-0.092 Sum_probs=30.5
Q ss_pred CceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--CCCCCcEE
Q 020887 49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN--PSEVGDIV 100 (320)
Q Consensus 49 ~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~--~~dID~vi 100 (320)
..++|.|++...-.... ....... ......++++|++.+||+ ++|||.+-
T Consensus 230 ~~~~I~g~~~~~~~~~~-~~~~~~~-~~~~~~a~~~a~~~Agi~~p~~Did~~e 281 (386)
T PRK08313 230 PVAWIHGTAMRTEPLAF-AGRDQVN-PQAGRDAAAALWKAAGITDPRDEIDVAE 281 (386)
T ss_pred CCeEEEEEEEEecCccc-ccccccc-cHHHHHHHHHHHHHcCCCCChhhCCEEE
Confidence 34588888764111000 1112222 245568999999999997 69999653
No 204
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=55.84 E-value=13 Score=36.42 Aligned_cols=42 Identities=31% Similarity=0.464 Sum_probs=37.9
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeeeeec
Q 020887 201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTK 243 (320)
Q Consensus 201 ~~~~~yGitre~la~vAv~s~~~Aa~n~~ag~~~~ei~pv~~~ 243 (320)
.+..+|| +||+++.+++.+|..+....+.|.+++++.+|.++
T Consensus 130 ~~~~~~~-~r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~ 171 (393)
T cd00826 130 VLINKYG-MRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVK 171 (393)
T ss_pred HHHHHhC-ChhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEe
Confidence 3566899 99999999999999999999999999999999775
No 205
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=55.30 E-value=45 Score=32.45 Aligned_cols=89 Identities=12% Similarity=0.089 Sum_probs=50.7
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC---C
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE---T 127 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~---~ 127 (320)
++|.|.+...... .. ...-...++++|++++||+++|||.+-+--.+ ........+.+|+.. +
T Consensus 268 ~~I~g~~~~~~~~------~~--~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f------~~~~~~~~e~lg~~~~pvn 333 (386)
T cd00751 268 ARIVGYAVAGVDP------AI--MGIGPVPAIPKALKRAGLTLDDIDLIEINEAF------AAQALACLKELGLDPEKVN 333 (386)
T ss_pred EEEEEEEEccCCC------cc--cchhHHHHHHHHHHHcCCCHHHcCEEEeechh------HHHHHHHHHHhCCChhhcC
Confidence 6899877764332 11 11223589999999999999999976542110 111222235666531 1
Q ss_pred --CCeEEe-cCCCCcHHHHHHHHHHHHHh
Q 020887 128 --VPLRTV-NRQCSSGLQAVADVATAIKA 153 (320)
Q Consensus 128 --~p~~~v-~~aCaSG~~Ai~~A~~~I~s 153 (320)
+..... +...++|...+..++..++-
T Consensus 334 ~~GG~l~~Gh~~gasG~~~~~e~~~qL~g 362 (386)
T cd00751 334 VNGGAIALGHPLGASGARIVVTLLHELKR 362 (386)
T ss_pred CCcchHhhCccHHHHHHHHHHHHHHHHHh
Confidence 111111 22355677778888888874
No 206
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=54.96 E-value=32 Score=34.26 Aligned_cols=87 Identities=15% Similarity=0.096 Sum_probs=49.8
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP 129 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p 129 (320)
.++|+|.+...... .. ...-...+++++|+++|++++|||.+.+-..+ ........+.+|++.. +
T Consensus 297 ~a~I~g~~~a~~~p-------~~-~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaF------a~~~l~~~~~lg~~~~-~ 361 (417)
T PRK06025 297 RARIVAMANMGDDP-------TL-MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAF------AVVAEKFIRDLDLDRD-K 361 (417)
T ss_pred cEEEEEEEEecCCc-------hh-hcccHHHHHHHHHHHcCCCHHHCcEEEEchHH------HHHHHHHHHHcCCChh-h
Confidence 47888866653221 00 00112478999999999999999987642211 1122244466777532 2
Q ss_pred eEEecCC--------CCcHHHHHHHHHHHHH
Q 020887 130 LRTVNRQ--------CSSGLQAVADVATAIK 152 (320)
Q Consensus 130 ~~~v~~a--------CaSG~~Ai~~A~~~I~ 152 (320)
+.++.+ .+||...+..++..++
T Consensus 362 -vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 362 -VNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred -ccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 222222 5677777766666554
No 207
>PRK05790 putative acyltransferase; Provisional
Probab=54.46 E-value=35 Score=33.29 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=55.7
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC----
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE---- 126 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~---- 126 (320)
++|.|.+...... .... .-...++++|++++||+++|||.+-+--. . ....-...+.+|+..
T Consensus 274 ~~I~g~~~~~~~~-------~~~~-~~~~~a~~~a~~~Agi~~~did~~e~~d~---f---~~~~l~~~e~lg~~~~pvN 339 (393)
T PRK05790 274 ARIVSYAVAGVDP-------AIMG-IGPVPAIRKALEKAGWSLADLDLIEINEA---F---AAQALAVEKELGLDPEKVN 339 (393)
T ss_pred EEEEEEEEccCCC-------Cccc-hhHHHHHHHHHHHcCCCHHHCCEEEeCcH---H---HHHHHHHHHHhCCChhhcC
Confidence 3799877653211 1111 12357899999999999999997753211 1 111112235666521
Q ss_pred -CCCeEE-ecCCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 020887 127 -TVPLRT-VNRQCSSGLQAVADVATAIKAGLYDIGIA 161 (320)
Q Consensus 127 -~~p~~~-v~~aCaSG~~Ai~~A~~~I~sG~advvLv 161 (320)
.+.... =+..++||..-+.+++..++....+..|+
T Consensus 340 ~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~~~gl~ 376 (393)
T PRK05790 340 VNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLA 376 (393)
T ss_pred CCcchhhhCcchhhhHHHHHHHHHHHHHhcCCCeEEE
Confidence 111111 12347788888889999988655555543
No 208
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=51.82 E-value=71 Score=31.30 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=50.4
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|+|++.+... .+.. ..-...++++||+++||+++|||.+-+- .. + ........+.+|+.. .|
T Consensus 274 a~i~g~~~~~~~-------~~~~-~~~~~~a~~~al~~agl~~~dId~~e~~---d~-f--~~~~~~~~e~lg~~~-~~- 337 (393)
T PRK05656 274 AKIAAYANAGVD-------PAIM-GIGPVSATRRCLDKAGWSLAELDLIEAN---EA-F--AAQSLAVGKELGWDA-AK- 337 (393)
T ss_pred EEEEEEEEecCC-------Cccc-chhHHHHHHHHHHHcCCCHHHCCEEEec---Cc-c--HHHHHHHHHHhCCCC-cc-
Confidence 478887765321 1111 1233579999999999999999977541 11 1 111223345667631 11
Q ss_pred EEec--------CCCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 131 RTVN--------RQCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 131 ~~v~--------~aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
..++ ...++|..-+.+.+..++.-.....|
T Consensus 338 vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~~~gl 375 (393)
T PRK05656 338 VNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGL 375 (393)
T ss_pred CCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 1111 22556666666666666432344443
No 209
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=51.82 E-value=18 Score=34.15 Aligned_cols=55 Identities=22% Similarity=0.208 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCch----hhHHHHHHHHcCCCCCCCeEEec
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR----AMECRMAAFYAGFPETVPLRTVN 134 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~----~~~a~~va~~lGl~~~~p~~~v~ 134 (320)
.+.....++++|+++|++++|||.|.++.. ++...+ ...++.++..+++ |...++
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~G-PG~~tglrvg~~~Ak~la~~~~~----p~~~v~ 107 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQG-PGLGGSLRVGATFARSLALSLDK----PLIGVN 107 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCchhhHHHHHHHHHHHHHHhCC----CEeecc
Confidence 567778899999999999999999987654 222212 2345666666665 455543
No 210
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=51.80 E-value=55 Score=32.17 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=53.5
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC--C
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET--V 128 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~--~ 128 (320)
++|+|.+.+..... ... .-...|+++||+++||+++|||.+-+-..+ ....-...+.+|+... .
T Consensus 281 ~~i~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~Did~~ei~d~f------~~~~l~~~e~lg~~~~~~~ 346 (404)
T PRK06205 281 ARLVSWAVAGVEPS----RMG----IGPVPATEKALARAGLTLDDIDLIELNEAF------AAQVLAVLKEWGFGADDEE 346 (404)
T ss_pred EEEEEEEEeccCCc----ccc----ccHHHHHHHHHHHcCCCHHHCCEeeeccHH------HHHHHHHHHHhCcCcccCC
Confidence 67888776543210 011 123678999999999999999976532111 0111122355676421 1
Q ss_pred CeEEecC--------CCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 129 PLRTVNR--------QCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 129 p~~~v~~--------aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
+ ..++. ..+||..-+.+++..++.......|
T Consensus 347 ~-vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl 385 (404)
T PRK06205 347 R-LNVNGSGISLGHPVGATGGRILATLLRELQRRQARYGL 385 (404)
T ss_pred C-cCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEE
Confidence 1 22222 3566777788888888754444444
No 211
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=51.78 E-value=70 Score=31.31 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=56.3
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|.|.+.+..... ... .-...+++.||+++||+++|||.+-+=..+ ....-...+.+|+.. .|
T Consensus 275 a~i~g~~~~~~~~~----~~~----~~~~~a~~~al~~Agl~~~dId~~e~~d~f------~~~~l~~~e~lg~~~-~~- 338 (394)
T PRK06445 275 AKIRSFGFAGVPPA----IMG----KGPVPASKKALEKAGLSVKDIDLWEINEAF------AVVVLYAIKELGLDP-ET- 338 (394)
T ss_pred EEEEEEEEeccCCc----hhc----chHHHHHHHHHHHcCCCHHHcCEEEecccc------hHHHHHHHHHhCCCc-cc-
Confidence 58998777643210 111 123678999999999999999976432111 111223346778742 22
Q ss_pred EEec--------CCCCcHHHHHHHHHHHHHhCCCCEEEE
Q 020887 131 RTVN--------RQCSSGLQAVADVATAIKAGLYDIGIA 161 (320)
Q Consensus 131 ~~v~--------~aCaSG~~Ai~~A~~~I~sG~advvLv 161 (320)
..++ -..+||..-+.+++..++....+..|+
T Consensus 339 vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~ 377 (394)
T PRK06445 339 VNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVA 377 (394)
T ss_pred cCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCCCEEEE
Confidence 2222 236778888888888887544555553
No 212
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=51.61 E-value=46 Score=32.62 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC-----CCeEEe-cCCCCcHHHHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-----VPLRTV-NRQCSSGLQAVADVATAI 151 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~-----~p~~~v-~~aCaSG~~Ai~~A~~~I 151 (320)
...+++.||+++||+++|||.+-+--.+ ....-...+.+|+... +..... +-..+||..-+...+..+
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~d~f------~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEINEAF------AAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhcchh------HHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999976431111 0111223356776311 111111 123667777778888877
Q ss_pred Hh
Q 020887 152 KA 153 (320)
Q Consensus 152 ~s 153 (320)
+.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 64
No 213
>PRK06059 lipid-transfer protein; Provisional
Probab=51.15 E-value=66 Score=31.45 Aligned_cols=69 Identities=9% Similarity=-0.010 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCC----------------eEEecC------
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP----------------LRTVNR------ 135 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p----------------~~~v~~------ 135 (320)
...++++|++++||+++|||.+-+-..+. ...-...+.+||.+.+. ...++.
T Consensus 275 ~~~a~~~a~~~agl~~~Did~~El~d~f~------~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~G 348 (399)
T PRK06059 275 KDQILDAAYAEAGIGPEDLSLAEVYDLST------ALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFG 348 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEeecccCh------HHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCC
Confidence 45789999999999999999664321110 11112236667642211 122222
Q ss_pred --CCCcHHHHHHHHHHHHH
Q 020887 136 --QCSSGLQAVADVATAIK 152 (320)
Q Consensus 136 --aCaSG~~Ai~~A~~~I~ 152 (320)
..++|+..+.+++..++
T Consensus 349 hp~gatG~~~~~e~~~qLr 367 (399)
T PRK06059 349 EAIPAQAIAQVCELTWQLR 367 (399)
T ss_pred ccCCccHHHHHHHHHHHhc
Confidence 34668888888888887
No 214
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.55 E-value=12 Score=36.78 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=26.5
Q ss_pred CCCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 291 s~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
-.+++||+++||-+++.|++.|.++.++|+
T Consensus 228 ~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~ 257 (406)
T PRK08439 228 FVMGEGAGALVLEEYESAKKRGAKIYAEII 257 (406)
T ss_pred EEeeCceEEEEEccHHHHHHCCCeEEEEEE
Confidence 346899999999999999999999888773
No 215
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=48.97 E-value=21 Score=33.96 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCch----hhHHHHHHHHcCCCCCCCeEEec
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR----AMECRMAAFYAGFPETVPLRTVN 134 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~----~~~a~~va~~lGl~~~~p~~~v~ 134 (320)
-.+.....++++|+++|++.++||.|.++.. |+.+.+ ...++.++..+++ |.+.|+
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~G-PGsftglrig~~~Ak~la~~~~~----p~~~v~ 108 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAG-PGLIGALLVGVSFAKALALALNK----PLIGVN 108 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CChHHhHHHHHHHHHHHHHHhCC----CEEecc
Confidence 4577788899999999999999999987654 322222 2345555555554 566654
No 216
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=48.02 E-value=93 Score=30.53 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=51.3
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCCC
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETVP 129 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~p 129 (320)
+.|.|++.+-=+.. ....+... ..+++++||+++||+++|||.+..- ..+... ......-+. .+.. ...|
T Consensus 261 a~I~g~~~~~d~~~----~~~p~~~~-~~~a~~~Al~~Agi~~~dId~v~~h-gtgt~~--~D~~E~~al-~~~~~~~~~ 331 (410)
T PRK07103 261 AKLLGWSMRLDANR----GPDPSLEG-EMRVIRAALRRAGLGPEDIDYVNPH-GTGSPL--GDETELAAL-FASGLAHAW 331 (410)
T ss_pred EEEEEEEEecCCCC----CCCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEcc-CCCCCC--CCHHHHHHH-hcCCCCCCe
Confidence 56777665432221 11122222 3588999999999999999976532 112111 112211121 2221 1122
Q ss_pred eE-----EecCCCCcHHHHHHHHHHHHHhCC
Q 020887 130 LR-----TVNRQCSSGLQAVADVATAIKAGL 155 (320)
Q Consensus 130 ~~-----~v~~aCaSG~~Ai~~A~~~I~sG~ 155 (320)
.. .-+...++|...+..++..++.|.
T Consensus 332 v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ 362 (410)
T PRK07103 332 INATKSLTGHGLSAAGIVELIATLLQMRAGF 362 (410)
T ss_pred EECCCcccccCchhhhHHHHHHHHHHHhCCe
Confidence 21 123446788888888888888774
No 217
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=45.95 E-value=57 Score=26.72 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecC--------CCCcHHHHHHHHHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR--------QCSSGLQAVADVATA 150 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~--------aCaSG~~Ai~~A~~~ 150 (320)
..|++++|+++|++.+|||.+=+=-. + ....-...+.+|++. ..+.++. ..+||..-+...+..
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----F--A~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~ 96 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----F--AAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQ 96 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----B--HHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----h--hhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHH
Confidence 57899999999999999996643211 1 111222345667742 1111211 256787777777777
Q ss_pred HHhCCCCEEE
Q 020887 151 IKAGLYDIGI 160 (320)
Q Consensus 151 I~sG~advvL 160 (320)
++....+..+
T Consensus 97 L~~~~~~~gl 106 (123)
T PF02803_consen 97 LRRRGGRYGL 106 (123)
T ss_dssp HHHHTTSEEE
T ss_pred HHHhchhhhh
Confidence 7764455544
No 218
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.84 E-value=42 Score=33.20 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe-----EEecCCCCcHHHHHHHHHHHH
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL-----RTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~-----~~v~~aCaSG~~Ai~~A~~~I 151 (320)
-...++++||+++||+++|||.+-. ...+.......-...+...+|-. ..+. ..=...+++|...+..++.++
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~-hgtgt~~~D~~E~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l 364 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNA-HATGTSVGDVAEGKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLAL 364 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEc-CCcCCCCCCHHHHHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHH
Confidence 3578999999999999999997742 22221111122233444555631 1122 112234566777777777777
Q ss_pred HhCC
Q 020887 152 KAGL 155 (320)
Q Consensus 152 ~sG~ 155 (320)
+.|.
T Consensus 365 ~~~~ 368 (418)
T PRK07910 365 RDGV 368 (418)
T ss_pred hcCc
Confidence 7773
No 219
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.38 E-value=74 Score=31.48 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-CCCCeE-----EecCCCCcHHHHHHHHHHH
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-ETVPLR-----TVNRQCSSGLQAVADVATA 150 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-~~~p~~-----~v~~aCaSG~~Ai~~A~~~ 150 (320)
-...++++||+++|+.++|||.+..- ..+.......-..-+...+|-. ...|.. .=+...++|...+..++.+
T Consensus 290 ~~~~ai~~AL~~agi~p~dId~i~~H-gtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~ 368 (425)
T PRK06501 290 PAIGAIRAALADAGLTPEQIDYINAH-GTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLT 368 (425)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEec-CccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHH
Confidence 35688999999999999999987642 1121111111122233334421 111221 1223467777788888888
Q ss_pred HHhCCC
Q 020887 151 IKAGLY 156 (320)
Q Consensus 151 I~sG~a 156 (320)
++.|..
T Consensus 369 l~~~~i 374 (425)
T PRK06501 369 IQTGRL 374 (425)
T ss_pred HhcCcC
Confidence 888853
No 220
>PRK09604 UGMP family protein; Validated
Probab=43.61 E-value=30 Score=33.11 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC---chhhHHHHHHHHcCCCCCCCeEEec
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS---TRAMECRMAAFYAGFPETVPLRTVN 134 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~---~~~~~a~~va~~lGl~~~~p~~~v~ 134 (320)
.+.....++++|+++|+++.|||.|.++..-+... -+...++.++..+++ |...++
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i----pl~~v~ 110 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK----PLIGVN 110 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC----CEEeec
Confidence 57778889999999999999999998765322211 122345666666665 455553
No 221
>PRK14878 UGMP family protein; Provisional
Probab=43.01 E-value=38 Score=32.30 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCc----hhhHHHHHHHHcCCC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST----RAMECRMAAFYAGFP 125 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~----~~~~a~~va~~lGl~ 125 (320)
+....+++++|+++|++++|||.|.++.. ++... +...++.++..+++|
T Consensus 46 ~~l~~~i~~~l~~a~~~~~did~Iavt~g-PG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 46 EVAPELLRKALEKAGISIEDIDAVAVSQG-PGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcccchHHHHHHHHHHHHHhCCC
Confidence 44558899999999999999999887653 22221 233467777777763
No 222
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.33 E-value=18 Score=35.23 Aligned_cols=25 Identities=8% Similarity=0.219 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEE
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIV 100 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi 100 (320)
.=+..+.++||++|||.|+|||.|-
T Consensus 301 ~Ga~~am~raL~~Agl~pe~i~YvN 325 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSPEDIDYVN 325 (440)
T ss_pred chHHHHHHHHHHHcCCChhhcCeee
Confidence 4567889999999999999999875
No 223
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=42.08 E-value=89 Score=30.55 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=53.2
Q ss_pred Cce-EEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC
Q 020887 49 DDV-VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET 127 (320)
Q Consensus 49 ~~v-~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~ 127 (320)
+++ +|+|.+...... .+. ......|++++++++||+++|||.+-+--.+. ...-...+.+|++..
T Consensus 265 ~pv~~I~g~~~~~~~~------~~~--~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa------~~~l~~le~lgl~g~ 330 (388)
T PRK06366 265 KPIARITGYESASLDP------LDF--VEAPIPATRKLLEKQNKSIDYYDLVEHNEAFS------IASIIVRDQLKIDNE 330 (388)
T ss_pred CcCEEEEEEEEEecCH------HHh--cccHHHHHHHHHHHcCCCHHHcceeeccchhH------HHHHHHHHHhCCCCC
Confidence 455 888877664321 111 12236899999999999999999664321110 111122356676422
Q ss_pred CCeEEecC--------CCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 128 VPLRTVNR--------QCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 128 ~p~~~v~~--------aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
.+.++. .++||..-+.+.+..++.-.....|
T Consensus 331 --~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~~~g~ 369 (388)
T PRK06366 331 --RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGL 369 (388)
T ss_pred --ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCCCeEE
Confidence 222222 2567777777777777643333433
No 224
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=41.95 E-value=19 Score=35.52 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=26.2
Q ss_pred CCCCcceEEEEcCHHHHHhcCCCCcEEEC
Q 020887 292 QVSDGAGAVLLMKRSLAVQKGLPILGVFR 320 (320)
Q Consensus 292 ~~sDGAaAvvLaSee~A~~~~~~P~ari~ 320 (320)
.+++||+++||-+.+.|++.|.++.++|.
T Consensus 229 v~gEGaa~lvLe~~~~A~~rga~i~a~i~ 257 (406)
T PRK07967 229 VIAGGGGVVVVEELEHALARGAKIYAEIV 257 (406)
T ss_pred eeeceEEEEEEeeHHHHHhCCCcEEEEEE
Confidence 56999999999999999999999988873
No 225
>PLN03170 chalcone synthase; Provisional
Probab=41.39 E-value=82 Score=31.05 Aligned_cols=70 Identities=6% Similarity=-0.067 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe---EEecCCCCcHHHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL---RTVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~---~~v~~aCaSG~~Ai~~A~~~I 151 (320)
+.....++++|+++|+..+|||.+++- +. +..+-..+...+|++...-. ..+..-+.++..++-.+...+
T Consensus 281 ~~i~~~v~~~L~~~gl~~~di~~~v~H---qg---g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 281 KNIERSLEEAFKPLGITDYNSIFWVAH---PG---GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHhcCCCccccCeEEec---CC---cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 444567788888999999999876642 21 23445567788898743321 224444445555555555544
No 226
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=40.02 E-value=52 Score=31.86 Aligned_cols=55 Identities=16% Similarity=0.255 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC----chhhHHHHHHHHcCCCCCCCeEEecC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS----TRAMECRMAAFYAGFPETVPLRTVNR 135 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~----~~~~~a~~va~~lGl~~~~p~~~v~~ 135 (320)
+-....+++||++||++.+|||.|-+... ++.. -+...|+.++..++. |.+-|+.
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~g-PGL~gaL~VG~~~Ak~LA~a~~k----Pli~VnH 110 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAG-PGLGGALLVGATAAKALALALNK----PLIPVNH 110 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecC-CCchhHHHHHHHHHHHHHHHhCC----CEeecch
Confidence 45567899999999999999998865322 2221 123456667766665 5666665
No 227
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=39.89 E-value=35 Score=33.07 Aligned_cols=56 Identities=21% Similarity=0.319 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCC----chhhHHHHHHHHcCCCCCCCeEEecC
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS----TRAMECRMAAFYAGFPETVPLRTVNR 135 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~----~~~~~a~~va~~lGl~~~~p~~~v~~ 135 (320)
.+-....++++|+++|++++|||.|.+... ++.. -+...++.++..+++ |.+-|++
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~G-PGl~~~LrVG~~~Ak~LA~a~~~----PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKG-PGMGAPLSVGAVVARTLSLLWGK----PLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCcHhhHHHHHHHHHHHHHHcCC----CEeecch
Confidence 456678889999999999999998876543 2221 123456666666665 4555544
No 228
>PLN03169 chalcone synthase family protein; Provisional
Probab=39.32 E-value=86 Score=30.71 Aligned_cols=68 Identities=9% Similarity=-0.005 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe---EEecCCCCcHHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL---RTVNRQCSSGLQAVADVAT 149 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~---~~v~~aCaSG~~Ai~~A~~ 149 (320)
....++++|+++|++++|||.+.+.. -+. +..+-..+...||++..... ..+..-+.++..+|-.+..
T Consensus 283 ~~~~i~~~L~~~gl~~~did~~~~v~-Hq~---n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~ 353 (391)
T PLN03169 283 IEGFCKKLMKKAGLVEKDYNDLFWAV-HPG---GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLE 353 (391)
T ss_pred HHHHHHHHHHHcCCCCCCCCcceEEe-cCC---CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHH
Confidence 34567889999999999999543311 122 23455567788999753322 1344444455445444444
No 229
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=38.51 E-value=48 Score=32.39 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEe
Q 020887 69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGT 103 (320)
Q Consensus 69 ~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~ 103 (320)
+...+..||....+.+++++|+|+.+|+|.|+-++
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 45567889999999999999999999999887554
No 230
>PLN02404 6,7-dimethyl-8-ribityllumazine synthase
Probab=38.48 E-value=1.5e+02 Score=24.91 Aligned_cols=42 Identities=5% Similarity=0.021 Sum_probs=29.1
Q ss_pred CCCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEE
Q 020887 47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIV 100 (320)
Q Consensus 47 ~~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi 100 (320)
..-++.|| ..+ .+....+-+.+.+.+.|++.|++.++|+-+.
T Consensus 6 ~~~ri~IV------~s~------fn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~ 47 (141)
T PLN02404 6 EGLRFGVV------VAR------FNEIITKNLLEGALETFKRYSVKEENIDVVW 47 (141)
T ss_pred CCCEEEEE------Eec------CcHHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 44567777 233 2345667778888889999999877777553
No 231
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=37.93 E-value=71 Score=30.58 Aligned_cols=80 Identities=16% Similarity=0.067 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHc--CCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe---EEec----CCCCcHHHHHHH
Q 020887 76 DLLAPVLKAVIEKT--RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL---RTVN----RQCSSGLQAVAD 146 (320)
Q Consensus 76 eLa~~A~~~AL~dA--Gl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~---~~v~----~aCaSG~~Ai~~ 146 (320)
+...++++++|+++ |++++|||.+++-.. +..+-..+...+|++...-. .++. ..++|-..++..
T Consensus 259 ~~~~~~i~~~L~~~~~g~~~~did~~~~H~~------~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~ 332 (361)
T cd00831 259 KNLERVLRKLLARLGIGLFKLAFDHWCVHPG------GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAY 332 (361)
T ss_pred HHHHHHHHHHhccccCCCccccceEEEECCC------ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHH
Confidence 34566788999999 999999998775322 12344567788898643211 1222 233333444444
Q ss_pred HHHHHHhCC---CCEEEEEee
Q 020887 147 VATAIKAGL---YDIGIAAGL 164 (320)
Q Consensus 147 A~~~I~sG~---advvLv~G~ 164 (320)
+. +.|+ -|.++.+++
T Consensus 333 ~~---~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 333 ME---AKGRVKRGDRGLLIAF 350 (361)
T ss_pred HH---HhCCCCCCCEEEEEEE
Confidence 43 3343 366766654
No 232
>PLN02287 3-ketoacyl-CoA thiolase
Probab=37.19 E-value=94 Score=31.23 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHH-HHHHHcCCCCCCCeEEe--------cCCCCcHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECR-MAAFYAGFPETVPLRTV--------NRQCSSGLQAVADVA 148 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~-~va~~lGl~~~~p~~~v--------~~aCaSG~~Ai~~A~ 148 (320)
...+++.||+++||+++|||.+-+- + ...+.. ...+.+|+.. .| +.+ +-..+||..-+.+.+
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----d---aFa~~~l~~~e~lG~~~-~p-vN~sGG~la~GHp~gAsG~~~v~~l~ 403 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----E---AFASQFVYCCKKLGLDP-EK-VNVNGGAIALGHPLGATGARCVATLL 403 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----c---hHHHHHHHHHHHcCCCc-cc-cCCCCcHHhccCcHHHHHHHHHHHHH
Confidence 4689999999999999999977431 1 111111 1235677631 11 111 123677777777777
Q ss_pred HHHHh
Q 020887 149 TAIKA 153 (320)
Q Consensus 149 ~~I~s 153 (320)
..++.
T Consensus 404 ~qL~~ 408 (452)
T PLN02287 404 HEMKR 408 (452)
T ss_pred HHHHh
Confidence 77764
No 233
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=35.53 E-value=1.5e+02 Score=28.99 Aligned_cols=96 Identities=10% Similarity=0.080 Sum_probs=53.2
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-C
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-P 129 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~-p 129 (320)
++|.|.+...... ..... -...+++.||+++||+++|||.+-+-..+ ....-...+.+|+.+.+ .
T Consensus 265 ~~I~g~~~~~~~~----~~~~~----~~~~a~~~al~~Agl~~~DId~~El~d~F------~~~~l~~~e~lg~~~~~~~ 330 (387)
T PRK08947 265 ARIRSMAVAGCDP----SIMGY----GPVPATQKALKRAGLSISDIDVFELNEAF------AAQSLPCLKDLGLLDKMDE 330 (387)
T ss_pred EEEEEEEEcCcCc----ccccc----cHHHHHHHHHHHcCCCHHHCCEEEecccc------hHHHHHHHHHcCCCCCCCC
Confidence 8999877652211 01111 13578889999999999999976432111 11122234667762110 1
Q ss_pred eEEec--------CCCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 130 LRTVN--------RQCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 130 ~~~v~--------~aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
...++ -.++||..-+...++.++.-...+.|
T Consensus 331 ~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl 369 (387)
T PRK08947 331 KVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGL 369 (387)
T ss_pred CcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCEEE
Confidence 11111 23667777777777777643345554
No 234
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=34.92 E-value=38 Score=32.24 Aligned_cols=48 Identities=10% Similarity=0.153 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCc----hhhHHHHHHHHcCC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST----RAMECRMAAFYAGF 124 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~----~~~~a~~va~~lGl 124 (320)
+.....++++|+++|++++|||.|.++.. ++... +...++.++..+++
T Consensus 47 ~~l~~~i~~~l~~~~~~~~did~Iavt~g-Pg~~~~l~vg~~~ak~la~~~~~ 98 (322)
T TIGR03722 47 EVAPKLIKEALEEAGVSLEDIDAVAFSQG-PGLGPCLRVGATAARALALKLNK 98 (322)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC-CchHHhHHHHHHHHHHHHHHhCC
Confidence 44556699999999999999999887643 22221 22346666666665
No 235
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=34.71 E-value=1.8e+02 Score=26.89 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC
Q 020887 75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP 125 (320)
Q Consensus 75 ~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~ 125 (320)
.+....+++++|++.|++ ++||.++.-... ....-..+...++++
T Consensus 222 ~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~-----~~~~~~~~~~~l~~~ 266 (324)
T cd00827 222 HKLIAKVVRKALDRAGLS-EDIDYFVPHQPN-----GKKILEAVAKKLGGP 266 (324)
T ss_pred hHHHHHHHHHHHHHcccc-cccceeeccCch-----HHHHHHHHHHHccch
Confidence 455678888999999999 999977653221 103455667788874
No 236
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=34.43 E-value=37 Score=33.43 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=29.3
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEE
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIV 100 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi 100 (320)
++|+|++.+.... .. ...-...++++||+++||+++|||.+-
T Consensus 273 a~I~g~~~~~~~~------~~--~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 273 ARIVSYASAGVDP------SI--MGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred EEEEEEEEecCCc------ch--hchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 5789877763211 11 113346789999999999999999765
No 237
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=32.98 E-value=2e+02 Score=28.11 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=52.2
Q ss_pred ceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCC-
Q 020887 50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV- 128 (320)
Q Consensus 50 ~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~- 128 (320)
.++|.|.+...... .... .-...+++++++++||+++|||.+-+--.+ ....-...+.+|+-..+
T Consensus 262 ~a~I~g~~~~~~~~-------~~~~-~~~~~a~~~al~~AGi~p~DId~~Ei~daF------a~~~l~~~e~lg~~~~g~ 327 (385)
T TIGR02445 262 RARIRSMAVAGCDP-------SIMG-YGPVPATQKALKRAGLSISDIDVFELNEAF------AAQALPCLKDLGLLDKMD 327 (385)
T ss_pred eEEEEEEEEcCCCC-------cccc-hhHHHHHHHHHHHcCCCHHHcCEEEEcccc------HHHHHHHHHHcCCCCCCC
Confidence 37899877653211 1111 123678899999999999999966442111 01111223566762111
Q ss_pred CeEEec--------CCCCcHHHHHHHHHHHHHhCCCCEEE
Q 020887 129 PLRTVN--------RQCSSGLQAVADVATAIKAGLYDIGI 160 (320)
Q Consensus 129 p~~~v~--------~aCaSG~~Ai~~A~~~I~sG~advvL 160 (320)
....++ -.++||..-+...++....-.....|
T Consensus 328 ~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~~~Gl 367 (385)
T TIGR02445 328 EKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGL 367 (385)
T ss_pred CCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCCCeEE
Confidence 111111 23677877777777776543333333
No 238
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=32.88 E-value=1.7e+02 Score=28.73 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCC--------CCcHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ--------CSSGLQAVADV 147 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~a--------CaSG~~Ai~~A 147 (320)
.....|+++|++++||+++|||.+-+-..+ ....-...+.+|+.. .| +.++.+ .++|..-+...
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d~F------a~~~l~~~e~lG~~~-~p-vN~~GG~la~Ghp~gatG~r~~~~l 359 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNEAF------ASVPLAWLKATGADP-ER-LNVNGGAIALGHPLGASGTKLMTTL 359 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecccc------hHHHHHHHHHhCCCC-CC-cCCCCcHHhcCCCcchhHHHHHHHH
Confidence 344568999999999999999976432111 111223346788852 22 333322 34554445555
Q ss_pred HHHHHhCCCCEE
Q 020887 148 ATAIKAGLYDIG 159 (320)
Q Consensus 148 ~~~I~sG~advv 159 (320)
+..++.-..+..
T Consensus 360 ~~~lr~~~~~~g 371 (390)
T PRK06504 360 VHALKQRGKRYG 371 (390)
T ss_pred HHHHHhhCCCeE
Confidence 666654334443
No 239
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=31.82 E-value=4.4e+02 Score=25.10 Aligned_cols=82 Identities=24% Similarity=0.273 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHh
Q 020887 74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA 153 (320)
Q Consensus 74 ~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~s 153 (320)
...=...++++|+.++|+++++|+..+.|....+.. ...+. ......+|..+ ...| |..+..|+.-|. .
T Consensus 47 A~~ni~~ai~~A~~~aG~~~~~i~~~~agla~ag~~--~~~~~-~~~~~~l~~a~-~v~v---~~Dg~iAl~ga~----~ 115 (301)
T COG2971 47 AVRNIKDAIREALDEAGLKPDEIAAIVAGLALAGAN--VEEAR-EELERLLPFAG-KVDV---ENDGLIALRGAL----G 115 (301)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhCceeeeeeccCcc--hhHHH-HHHHHhcCccc-eEEE---ecChHHHHhhcc----C
Confidence 344457889999999999999999887776543322 11121 12234443211 3455 455555554332 1
Q ss_pred CCCCEEEEEeecc
Q 020887 154 GLYDIGIAAGLES 166 (320)
Q Consensus 154 G~advvLv~G~E~ 166 (320)
+.--++++.|.-+
T Consensus 116 ~~~Gii~i~GTGS 128 (301)
T COG2971 116 DDDGIIVIAGTGS 128 (301)
T ss_pred CCCCEEEEecCCe
Confidence 3344565555444
No 240
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=31.81 E-value=1.1e+02 Score=30.10 Aligned_cols=69 Identities=10% Similarity=0.136 Sum_probs=40.9
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCC-----CCeEEe-cCCCCcHHHHHHHHHHHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-----VPLRTV-NRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~-----~p~~~v-~~aCaSG~~Ai~~A~~~I~ 152 (320)
..++++||+++||+++|||.+-+-..+ ....-...+.+|+... +..... +..++||..-+...+..++
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~f------~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEAF------SVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcHH------HHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999977542111 1112223456776311 111111 1236777777777777776
Q ss_pred h
Q 020887 153 A 153 (320)
Q Consensus 153 s 153 (320)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 4
No 241
>cd07321 Extradiol_Dioxygenase_3A_like Subunit A of Class III extradiol dioxygenases. Extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. There are two major groups of dioxygenases according to the cleavage site of the aromatic ring. Intradiol enzymes cleave the aromatic ring between two hydroxyl groups, whereas extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Extradiol dioxygenases can be divided into three classes. Class I and II enzymes are evolutionary related and show sequence similarity, with the two domain class II enzymes evolving from the class I enzyme through gene duplication. Class III enzymes are different in sequence and structure and usually have two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents subunit A of c
Probab=31.12 E-value=47 Score=24.86 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHR 222 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~ 222 (320)
..-+.|+++||+|.||.+++--++..
T Consensus 24 ~dp~a~~~~~~Lt~eE~~al~~rD~~ 49 (77)
T cd07321 24 ADPEAVLAEYGLTPEEKAALLARDVG 49 (77)
T ss_pred hCHHHHHHHcCCCHHHHHHHHcCCHH
Confidence 44678999999999999886554433
No 242
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=31.12 E-value=80 Score=23.68 Aligned_cols=31 Identities=26% Similarity=0.262 Sum_probs=26.6
Q ss_pred cCCCCcHHHHHHHHHHHHHhCCCCEEEEEee
Q 020887 134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164 (320)
Q Consensus 134 ~~aCaSG~~Ai~~A~~~I~sG~advvLv~G~ 164 (320)
...+++|...-..+..++..|..|.|++++.
T Consensus 14 r~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~ 44 (82)
T PF04422_consen 14 REKSQSGGVVTALLAYLLESGLVDGVVVVGR 44 (82)
T ss_pred cccCCcHHHHHHHHHHHHHcCCceEEEEEee
Confidence 3468888888888999999999999999873
No 243
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=30.94 E-value=1.2e+02 Score=29.87 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHH-HHHHHcCCCCCCCeEEecC--------CCCcHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECR-MAAFYAGFPETVPLRTVNR--------QCSSGLQAVADVA 148 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~-~va~~lGl~~~~p~~~v~~--------aCaSG~~Ai~~A~ 148 (320)
...++++||+++||+++|||.+-+- . ...+.. ...+.+|+.. . .+.++. ..+||..-+...+
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~---d----~fa~~~l~~~e~lg~~~-~-~vN~~GG~~a~Ghp~gasG~~~~~~~~ 367 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEIN---E----AFAVVTMAAMKEHGLPH-E-KVNVNGGACALGHPIGASGARILVTLI 367 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehh---h----HHHHHHHHHHHHhCCCc-c-cCCcCCChHHhcccHHHHHHHHHHHHH
Confidence 3679999999999999999977321 1 111111 1125577642 1 122222 3566777777777
Q ss_pred HHHH
Q 020887 149 TAIK 152 (320)
Q Consensus 149 ~~I~ 152 (320)
..++
T Consensus 368 ~qL~ 371 (397)
T PRK06954 368 GALR 371 (397)
T ss_pred HHHH
Confidence 7776
No 244
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=30.00 E-value=51 Score=19.92 Aligned_cols=16 Identities=13% Similarity=0.273 Sum_probs=13.6
Q ss_pred HHHHHHhCCCHHHHHH
Q 020887 200 ENVAQRFGVTRQEQDL 215 (320)
Q Consensus 200 ~~~~~~yGitre~la~ 215 (320)
.+|.+++|+|.|++.+
T Consensus 8 NrYV~eh~ls~ee~~~ 23 (28)
T PF12368_consen 8 NRYVKEHGLSEEEVAE 23 (28)
T ss_pred hhhHHhcCCCHHHHHH
Confidence 5799999999999754
No 245
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=29.85 E-value=1.6e+02 Score=28.68 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecC--------CCCcHHHHHHHHHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR--------QCSSGLQAVADVATA 150 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~--------aCaSG~~Ai~~A~~~ 150 (320)
..++++|++++||.++|||.+-+- ..+ ....-...+.+|+.. .| +..+. ..+||..-+.+.+..
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~---d~F---a~~~~~~~e~lG~~~-~p-vN~~GG~l~~Ghp~gasG~~~~~e~~~q 354 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN---EAF---APVVLAWLKETGADP-AK-VNPNGGAIALGHPLGATGAKLMTTLLHE 354 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec---ccc---hHHHHHHHHHhCCCc-hh-cCCCcchhhhcCcHHHHHHHHHHHHHHH
Confidence 468999999999999999976331 111 111122245677742 22 22222 256777777777777
Q ss_pred HHhCCCCEEE
Q 020887 151 IKAGLYDIGI 160 (320)
Q Consensus 151 I~sG~advvL 160 (320)
++.-...+.|
T Consensus 355 L~~~~~~~gl 364 (382)
T PRK07801 355 LERTGGRYGL 364 (382)
T ss_pred HHhcCCCEEE
Confidence 7742334444
No 246
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=29.51 E-value=54 Score=33.39 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCc----hhhHHHHHHHHcCCC
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST----RAMECRMAAFYAGFP 125 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~----~~~~a~~va~~lGl~ 125 (320)
+....+++++|+++|++++|||.|.++.. ++... +...|+.++..+++|
T Consensus 50 ~~l~~~i~~~l~~~~~~~~~id~iav~~g-Pg~~~~l~vg~~~ak~la~~~~~~ 102 (535)
T PRK09605 50 EAIPKVIKEALEEAGLKPEDIDLVAFSQG-PGLGPCLRVVATAARALALSLDVP 102 (535)
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEECCC-CCcHhhHHHHHHHHHHHHHHhCCC
Confidence 44558899999999999999998877543 22221 223455566666653
No 247
>PLN03172 chalcone synthase family protein; Provisional
Probab=29.21 E-value=1.5e+02 Score=29.04 Aligned_cols=69 Identities=6% Similarity=-0.096 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeE---EecCCCCcHHHHHHHHHHHH
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR---TVNRQCSSGLQAVADVATAI 151 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~---~v~~aCaSG~~Ai~~A~~~I 151 (320)
-....+++.|++.|+...|||.+++= +. +..+-..+...||++...... .+..-+.++..+|..+...+
T Consensus 278 ~i~~~~~~~L~~~gl~~~di~~~~~H---qg---g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 278 NIEKSLVEAFAPIGINDWNSIFWIAH---PG---GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHhhhcCCCccccceEEec---CC---cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 33456677888899998889976542 21 234555677889997433221 24444555555555555544
No 248
>cd07923 Gallate_dioxygenase_C The C-terminal domain of Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of the PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. This model represents the C-terminal domain, which is similar to the A subunit of PCA 4,5-dioxygenase (or LigAB). The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. Since enzymes in this subfamily have fused A and B subunits, the dimer interface may resemble the tetramer interface of classical LigAB enzymes. This enzyme belongs to the class III extradiol dioxygenase family, composed of enzymes whi
Probab=28.89 E-value=53 Score=25.74 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAA 226 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~ 226 (320)
..-+.||.+||+|.|+.+.|--++...-.+
T Consensus 26 ~D~ea~~~e~gLt~Ee~~av~~rD~~~li~ 55 (94)
T cd07923 26 EDPEALFDEAGLTEEERTLIRNRDWIGMIR 55 (94)
T ss_pred hCHHHHHHHcCCCHHHHHHHHcchHHHHHH
Confidence 445789999999999999877666555443
No 249
>PF05920 Homeobox_KN: Homeobox KN domain; InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=28.75 E-value=1.1e+02 Score=19.75 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=20.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHH
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRR 223 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~ 223 (320)
.=+.++++.|+|+.|++.|-+..+++
T Consensus 15 ek~~L~~~tgls~~Qi~~WF~NaRrR 40 (40)
T PF05920_consen 15 EKEELAKQTGLSRKQISNWFINARRR 40 (40)
T ss_dssp HHHHHHHHHTS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhHcc
Confidence 34567899999999999998877654
No 250
>PLN03173 chalcone synthase; Provisional
Probab=28.57 E-value=1.6e+02 Score=28.97 Aligned_cols=71 Identities=3% Similarity=-0.114 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeE---EecCCCCcHHHHHHHHHHHHH
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR---TVNRQCSSGLQAVADVATAIK 152 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~---~v~~aCaSG~~Ai~~A~~~I~ 152 (320)
+.....++++|+++|+..+|||.+++- +. +..+-..+...|||+...-.. .+..-+.++..+|-.+...+.
T Consensus 277 ~~~~~~i~~~L~~~gl~~~di~~~v~H---qg---g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~ 350 (391)
T PLN03173 277 KNVEKSLTEAFKPLGISDWNSLFWIAH---PG---GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMR 350 (391)
T ss_pred HHHHHHHHHHHHhcCCCccccCeEEEC---CC---cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHH
Confidence 444567778888999999999987642 21 234555677889997543221 244445555555555555444
No 251
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=28.53 E-value=3.7e+02 Score=25.97 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC--------------CCCCeEEecCCCC-cHHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--------------ETVPLRTVNRQCS-SGLQA 143 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~--------------~~~p~~~v~~aCa-SG~~A 143 (320)
...+.+=++|.|.++++-|.|+.|-- +. -|..+...+...-|+. ...+...-..+|+ |....
T Consensus 205 ~dti~~h~~d~~~~~~~yd~i~tgdl-g~--vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~ 281 (327)
T TIGR02845 205 ADTIEAHFKDTGRSVDDYDLIVTGDL-AR--VGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVT 281 (327)
T ss_pred HHHHHHHHHHcCCChhhccEEEecch-HH--HHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHH
Confidence 45556678899999999999998742 11 1334444444333332 0112111223342 22333
Q ss_pred HHHHHHHHHhCCCCEEEEEeecc-cccccc
Q 020887 144 VADVATAIKAGLYDIGIAAGLES-MTVNSI 172 (320)
Q Consensus 144 i~~A~~~I~sG~advvLv~G~E~-~s~~~~ 172 (320)
-.+=+..++.|+.+.+|+++.-. +|...+
T Consensus 282 ~~~~~~~~~~g~~~r~l~v~tgalls~~s~ 311 (327)
T TIGR02845 282 YGHILKEMLRGKLKKVLVVATGALLSPTTF 311 (327)
T ss_pred HHHHHHHHhcCcceEEEEEEchhhcCcchh
Confidence 35557889999999999998766 454443
No 252
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=27.90 E-value=49 Score=32.62 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=49.6
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCe
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL 130 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~ 130 (320)
++|+|++.+.... .... .-...+++.||+++||+++|||.+-+--.+ ....-...+.+|+......
T Consensus 279 ~~i~g~~~~~~~~-------~~~~-~~~~~a~~~a~~~agl~~~did~~ei~d~F------a~~~l~~~e~lg~~~~~~~ 344 (401)
T PRK08131 279 ARILSSAAAGVEP-------RIMG-IGPVEAIKKALARAGLTLDDMDIIEINEAF------ASQVLGCLKGLGVDFDDPR 344 (401)
T ss_pred EEEEEEEEeccCC-------cccc-chHHHHHHHHHHHcCCCHHHCCeehhccHH------HHHHHHHHHHcCCCCCCCC
Confidence 5799977775422 1111 234689999999999999999976432111 0011112356676211111
Q ss_pred EEecC--------CCCcHHHHHHHHHHHHHh
Q 020887 131 RTVNR--------QCSSGLQAVADVATAIKA 153 (320)
Q Consensus 131 ~~v~~--------aCaSG~~Ai~~A~~~I~s 153 (320)
+..+. ..+||..-+.+++..++.
T Consensus 345 vN~~GG~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 345 VNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred ccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 22222 256677777777777763
No 253
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=26.64 E-value=3.4e+02 Score=26.85 Aligned_cols=24 Identities=17% Similarity=0.116 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 78 LAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
...++++||+++||+++|||.+-+
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei 334 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDM 334 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 457899999999999999997643
No 254
>PLN02854 3-ketoacyl-CoA synthase
Probab=26.47 E-value=2.8e+02 Score=28.51 Aligned_cols=81 Identities=9% Similarity=0.009 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHcCCCC------CCCCcEEEEeecCCCCchhhHHHHHHHHcCCC---CCCCeEEecCCCCcHHHHHHHHH
Q 020887 78 LAPVLKAVIEKTRLNP------SEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP---ETVPLRTVNRQCSSGLQAVADVA 148 (320)
Q Consensus 78 a~~A~~~AL~dAGl~~------~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~---~~~p~~~v~~aCaSG~~Ai~~A~ 148 (320)
+...+++.|.++|+.+ ++||.+++- +. +..+-..+...+|++ ......++..-+.++..+|-.+.
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iH---qg---gr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L 460 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIH---AG---GRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYEL 460 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEEC---CC---CHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHH
Confidence 4667888899999986 578766542 21 234455678889996 23444566777777777776665
Q ss_pred HHH-HhCCC---CEEEEEee
Q 020887 149 TAI-KAGLY---DIGIAAGL 164 (320)
Q Consensus 149 ~~I-~sG~a---dvvLv~G~ 164 (320)
..+ +.|+. |.++.+|+
T Consensus 461 ~~~~~kGrik~GD~Vl~iaF 480 (521)
T PLN02854 461 AYTEAKGRVSAGDRVWQIAF 480 (521)
T ss_pred HHHHHcCCCCCCCEEEEEEE
Confidence 544 34543 66766554
No 255
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=26.36 E-value=1.1e+02 Score=28.33 Aligned_cols=26 Identities=12% Similarity=0.280 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCcEEE
Q 020887 76 DLLAPVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 76 eLa~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
+.....++++|+.++++.+|||.+.+
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icy 76 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICY 76 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEE
Confidence 44556788999999999999997754
No 256
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=26.25 E-value=15 Score=36.21 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 020887 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAA 227 (320)
Q Consensus 198 ~A~~~~~~yGitre~la~vAv~s~~~Aa~n 227 (320)
.+++++++|+++.++++.+|+++++|+..+
T Consensus 186 ~~re~~~~~a~~s~~~a~~A~~n~~~a~~~ 215 (406)
T PRK07851 186 ISREEQDEWGVRSQNRAEEAIANGFFEREI 215 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCccce
Confidence 467899999999999999999999999763
No 257
>cd07921 PCA_45_Doxase_A_like Subunit A of the Class III Extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, and similar enzymes. This subfamily includes the A subunit of protocatechuate (PCA) 4,5-dioxygenase (LigAB) and two subfamilies of unknown function. The A subunit is the smaller, non-catalytic subunit of LigAB. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds. PCA 4,5-dioxygenase is one of the aromatic ring opening dioxygenases which play key roles in the degradation of aromatic compounds. As members of the Class III extradiol dioxygenase family, the enzymes use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like class III enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit.
Probab=25.26 E-value=66 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRA 224 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~A 224 (320)
..-+.|+++||+|.||.++|--+....-
T Consensus 34 aD~eAy~~~~gLTeEe~~AV~~rD~~~L 61 (106)
T cd07921 34 ADEEAYCDKFGLTEEQKQAVLDRDWLRL 61 (106)
T ss_pred hCHHHHHHHcCCCHHHHHHHHhCCHHHH
Confidence 4468899999999999887655444433
No 258
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=25.24 E-value=1.2e+02 Score=29.78 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=29.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCCC-CCCcEEEEe
Q 020887 69 FKDTLADDLLAPVLKAVIEKTRLNPS-EVGDIVVGT 103 (320)
Q Consensus 69 ~~~~s~~eLa~~A~~~AL~dAGl~~~-dID~vi~g~ 103 (320)
+...+..||....+.+++++|+|+.+ |+|.|+-++
T Consensus 62 LTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRST 97 (448)
T PF09887_consen 62 LTRESVAELVRDTLLESHKKAHLDIKKDLDFVVRST 97 (448)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCccccceEEEeec
Confidence 45567889999999999999999987 999887554
No 259
>PRK12404 stage V sporulation protein AD; Provisional
Probab=25.18 E-value=4.6e+02 Score=25.37 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC--------CCCeEE-------ecCCCC-cHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE--------TVPLRT-------VNRQCS-SGLQ 142 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~--------~~p~~~-------v~~aCa-SG~~ 142 (320)
+..+.+=++|.|.++++-|.|+.|-- +. -+..+...+...-|+.. ..-.|+ -..+|+ |...
T Consensus 209 ~dti~~h~~d~~~~~~~yDlI~TGDL-g~--vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v 285 (334)
T PRK12404 209 VDTIEAHLRDRQIDASYYDLIVTGDL-GH--VGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATV 285 (334)
T ss_pred HHHHHHHHHHhCCChhhccEEEEcch-HH--HHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHH
Confidence 45566678899999999999998742 11 13444555544444421 001111 112332 2233
Q ss_pred HHHHHHHHHHhCCCCEEEEEeecc-cccccc
Q 020887 143 AVADVATAIKAGLYDIGIAAGLES-MTVNSI 172 (320)
Q Consensus 143 Ai~~A~~~I~sG~advvLv~G~E~-~s~~~~ 172 (320)
.-.+-+..++.|+.+.+|+++.-. +|...+
T Consensus 286 ~~g~~~~~~~~g~~~rvL~v~TGALlS~~s~ 316 (334)
T PRK12404 286 TYGHLLNRMKRGELKRILVVATGALLSPLSF 316 (334)
T ss_pred HHHHHHHHHhcCCceEEEEEEchhhcCcchh
Confidence 445667899999999999998766 454443
No 260
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=24.69 E-value=57 Score=32.47 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHH----HHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHH
Q 020887 71 DTLADDLLAPVL----KAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD 146 (320)
Q Consensus 71 ~~s~~eLa~~A~----~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~ 146 (320)
|+...+|+..|+ +-+|+++|++++|||.++++-.++. .+...-+..+||= |....+.-..-|+.|+.=
T Consensus 299 DIr~~qlAKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~-----~l~~~~a~~iGLl---P~~~~~kv~~~GN~al~G 370 (412)
T PF14574_consen 299 DIREFQLAKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGN-----YLDPESAIRIGLL---PDVPAEKVRFVGNAALAG 370 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--GGG--EEEEECSS-S-----EEEHHHHHHTTSS-----S-GGGEEEEC-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccc-----cCCHHHHhhcCCC---CCccccCEEEECcHHHHH
Confidence 444556665544 4567899999999999988755543 2333345678872 333333334445556666
Q ss_pred HHHHHHh
Q 020887 147 VATAIKA 153 (320)
Q Consensus 147 A~~~I~s 153 (320)
|...+.+
T Consensus 371 A~~~Ll~ 377 (412)
T PF14574_consen 371 ARMALLS 377 (412)
T ss_dssp HHHHHHB
T ss_pred HHHHhCC
Confidence 6665554
No 261
>PRK13410 molecular chaperone DnaK; Provisional
Probab=24.53 E-value=1.9e+02 Score=30.63 Aligned_cols=45 Identities=13% Similarity=0.209 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCC
Q 020887 77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (320)
Q Consensus 77 La~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl 124 (320)
-....++++|+++|+.+++||.|++- |++..-+.+-..+...+|.
T Consensus 310 r~~~~i~~~L~~ag~~~~dId~VvLV---GGssRiP~V~~~l~~~fg~ 354 (668)
T PRK13410 310 RLLRPVKRALKDAGLSPEDIDEVVLV---GGSTRMPMVQQLVRTLIPR 354 (668)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEE---CCccccHHHHHHHHHHcCC
Confidence 34566788999999999999988653 2222245667777778775
No 262
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=24.40 E-value=2.9e+02 Score=27.45 Aligned_cols=23 Identities=13% Similarity=0.112 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEE
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVV 101 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~ 101 (320)
..+++.||+++||+++|||.+-+
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei 336 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDM 336 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEe
Confidence 46889999999999999996643
No 263
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=24.17 E-value=2.9e+02 Score=34.26 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=55.7
Q ss_pred eEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCC----
Q 020887 51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE---- 126 (320)
Q Consensus 51 v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~---- 126 (320)
..|.|.+.+-=|+. .+ +..-+... -.+++++||++|||++++||.|-. ...+.......-..-+...+|-..
T Consensus 293 AvI~G~g~~~DG~~-~~-itaP~~~g-q~~~i~~Al~~Agi~p~~I~yIea-HGTGT~~gD~~E~~Al~~vf~~~~~~~~ 368 (2582)
T TIGR02813 293 AVIKGVGASSDGKF-KS-IYAPRPEG-QAKALKRAYDDAGFAPHTCGLIEA-HGTGTAAGDVAEFGGLVSVFSQDNDQKQ 368 (2582)
T ss_pred EEEEEEEEcCCCCC-CC-CcCCCHHH-HHHHHHHHHHHcCCCHHHCCEEEe-cCCCCCCCCHHHHHHHHHHhcccccCCC
Confidence 45777666554541 11 11112222 368999999999999999997742 222221111211223333443210
Q ss_pred CCCe-----EEecCCCCcHHHHHHHHHHHHHhCCC
Q 020887 127 TVPL-----RTVNRQCSSGLQAVADVATAIKAGLY 156 (320)
Q Consensus 127 ~~p~-----~~v~~aCaSG~~Ai~~A~~~I~sG~a 156 (320)
..+. ..=...+++|...+.-++.+++.|..
T Consensus 369 ~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~i 403 (2582)
T TIGR02813 369 HIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVL 403 (2582)
T ss_pred CceeeccccccccchHhHHHHHHHHHHHHHhcCCc
Confidence 0111 11224578899999999999988754
No 264
>PRK08304 stage V sporulation protein AD; Validated
Probab=23.92 E-value=5e+02 Score=25.16 Aligned_cols=91 Identities=13% Similarity=0.153 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCC-------CCCCeEE-----ec---CCCC-cHHH
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP-------ETVPLRT-----VN---RQCS-SGLQ 142 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~-------~~~p~~~-----v~---~aCa-SG~~ 142 (320)
+..+..=++|.|.++++-|.|+.|-- +. -|..+...+...-|+. +..-.|+ +. .+|+ |...
T Consensus 211 ~dti~~h~~d~~~~~~~yDli~tGDl-g~--vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v 287 (337)
T PRK08304 211 ADTIQQHFKDTGRSPEDYDLIVTGDL-GR--VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVV 287 (337)
T ss_pred HHHHHHHHHHcCCChhhccEEEEcch-HH--HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHH
Confidence 45556678899999999999998743 11 1334444444443442 1111222 21 2332 2233
Q ss_pred HHHHHHHHHHhCCCCEEEEEeecc-cccccc
Q 020887 143 AVADVATAIKAGLYDIGIAAGLES-MTVNSI 172 (320)
Q Consensus 143 Ai~~A~~~I~sG~advvLv~G~E~-~s~~~~ 172 (320)
.-.+=+..++.|+.+.||+++.-. +|...+
T Consensus 288 ~~~~~~~~~~~g~~~rvl~v~tGaLls~~s~ 318 (337)
T PRK08304 288 TYGYLLKELQKGKLKRVLVVATGALLSPTSS 318 (337)
T ss_pred HHHHHHHHHhcCCceEEEEEEchhhcCcchh
Confidence 345567889999999999998766 444433
No 265
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=23.30 E-value=2.1e+02 Score=30.21 Aligned_cols=43 Identities=9% Similarity=0.046 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCC
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl 124 (320)
...++++|+++|+++++||.|++- |+...-|.+-..+...+|.
T Consensus 337 ~~~v~~~L~~a~~~~~dId~VvLV---GGssriP~V~~~l~~~fg~ 379 (657)
T PTZ00186 337 IAPCKQCMKDAGVELKEINDVVLV---GGMTRMPKVVEEVKKFFQK 379 (657)
T ss_pred HHHHHHHHHHcCCChhhCCEEEEE---CCcccChHHHHHHHHHhCC
Confidence 456788999999999999987652 2222245667778888885
No 266
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=22.43 E-value=2.6e+02 Score=27.74 Aligned_cols=25 Identities=12% Similarity=0.017 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCC--CCCCCcEEE
Q 020887 77 LLAPVLKAVIEKTRLN--PSEVGDIVV 101 (320)
Q Consensus 77 La~~A~~~AL~dAGl~--~~dID~vi~ 101 (320)
....++++|++++||+ ++|||.+-+
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei 320 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIEL 320 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEe
Confidence 3457999999999997 799997644
No 267
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=22.13 E-value=83 Score=32.46 Aligned_cols=76 Identities=12% Similarity=0.049 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCCCCcHHHHHHHHHHHHHhCCCCE
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDI 158 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSG~~Ai~~A~~~I~sG~adv 158 (320)
.+-++.+|+||++..+||+.|+.- ++....+-.-..+.+.+|- .|+-.++-..+..+-|-.++ .+.+|+.+-
T Consensus 337 i~p~~~aL~dA~~~~~di~EV~lv---ggmtrmpkv~s~V~e~fgk---~p~~~vnPdeava~GAaiqg--gvl~geVkd 408 (640)
T KOG0102|consen 337 IEPCKKALRDASLSSSDINEVILV---GGMTRMPKVQSTVKELFGK---GPSKGVNPDEAVAGGAAIQG--GVLSGEVKD 408 (640)
T ss_pred hhHHHHHHHhccCChhhhhhhhhh---cchhhcHHHHHHHHHHhCC---CCCCCcCCcchhccchhhcc--chhhccccc
Confidence 456889999999999999987642 1111134455667788884 45666655444332222221 467788877
Q ss_pred EEEE
Q 020887 159 GIAA 162 (320)
Q Consensus 159 vLv~ 162 (320)
++..
T Consensus 409 vlLL 412 (640)
T KOG0102|consen 409 VLLL 412 (640)
T ss_pred eeee
Confidence 6654
No 268
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=21.72 E-value=1.4e+02 Score=29.33 Aligned_cols=52 Identities=10% Similarity=-0.006 Sum_probs=31.0
Q ss_pred CCceEEEecccccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCC--CCCCcEEE
Q 020887 48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNP--SEVGDIVV 101 (320)
Q Consensus 48 ~~~v~IvG~g~Tp~~r~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~--~dID~vi~ 101 (320)
.+.++|.|.+.. ..... ....+.........++++|++.+|+++ +|||.+-+
T Consensus 236 ~~~v~I~g~~~~-~~~~~-~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei 289 (392)
T PRK06065 236 DTPVWVEGVGWT-LDNTE-WPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEP 289 (392)
T ss_pred CCCEEEEEEEEe-cCccc-cccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEe
Confidence 467899988763 11100 001112222223579999999999985 89996643
No 269
>PLN03184 chloroplast Hsp70; Provisional
Probab=21.47 E-value=2e+02 Score=30.50 Aligned_cols=52 Identities=12% Similarity=0.199 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEEeecCCCCchhhHHHHHHHHcCCCCCCCeEEecCC
Q 020887 79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ 136 (320)
Q Consensus 79 ~~A~~~AL~dAGl~~~dID~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~a 136 (320)
...++++|+++++++++||.|++- |+...-+.+-..+...+|.+ +...++.-
T Consensus 349 ~~~i~~~L~~a~~~~~dId~ViLv---GGssriP~V~~~i~~~fg~~---~~~~~npd 400 (673)
T PLN03184 349 KTPVENALRDAKLSFKDIDEVILV---GGSTRIPAVQELVKKLTGKD---PNVTVNPD 400 (673)
T ss_pred HHHHHHHHHHcCCChhHccEEEEE---CCccccHHHHHHHHHHhCCC---cccccCcc
Confidence 456788999999999999988652 22212455667777788752 34445443
No 270
>cd07925 LigA_like_1 The A subunit of Uncharacterized proteins with similarity to Protocatechuate 4,5-dioxygenase (LigAB). The proteins of unknown function in this subfamily are similar to the A subunit of the Protocatechuate (PCA) 4,5-dioxygenase (LigAB). LigAB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Dioxygenases play key roles in the degradation of aromatic compounds. PCA 4,5-dioxygenase catalyzes the oxidization and subsequent ring-opening of PCA (or 3,4-dihydroxybenzoic acid), which is an intermediate in the breakdown of lignin and other compounds.
Probab=21.05 E-value=1.3e+02 Score=24.08 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 020887 196 GITSENVAQRFGVTRQEQDLAAVESHRRAA 225 (320)
Q Consensus 196 g~~A~~~~~~yGitre~la~vAv~s~~~Aa 225 (320)
-..-+.|+.+||+|.||-++|--++...-.
T Consensus 33 ~aD~~Ay~~~~~Lteeqr~av~~RD~~~li 62 (106)
T cd07925 33 LADEEAYCEKFGLTPEQKQAVRNRDVLRML 62 (106)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHhhHHHHH
Confidence 344688999999999998886665555444
No 271
>PRK13379 protocatechuate 4,5-dioxygenase subunit alpha; Provisional
Probab=20.18 E-value=1.4e+02 Score=24.32 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 020887 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAA 226 (320)
Q Consensus 197 ~~A~~~~~~yGitre~la~vAv~s~~~Aa~ 226 (320)
..-+.|+.+||.|.||-+.|--++...-.+
T Consensus 46 aDe~ay~~~~~Lt~eqk~aV~~RDw~~mi~ 75 (119)
T PRK13379 46 QDAEALMQEAGLTEQEKELIRARDWLGLVQ 75 (119)
T ss_pred hCHHHHHHHcCCCHHHHHHHHhccHHHHHH
Confidence 446889999999999998877766655544
Done!