BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020888
(320 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 145/278 (52%), Gaps = 17/278 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDD-RLVIQDFRHEVNLL 94
EID +EL IIG G FG++ +A+W G VA+K +D I++ R E L
Sbjct: 3 EIDFAELTLEE--IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
L+HPNI+ G + L L+ E+ RGG L++ L K + P VN+A+ IARGM
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMN 119
Query: 155 YLHNEPNV-IIHRDLKPRNVLLVNS------SADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
YLH+E V IIHRDLK N+L++ S LK+ DFGL++ H KM+
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSA 174
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
G+Y +MAPEV + + K DV+S+ ++L+E+L GE P + A VA
Sbjct: 175 -AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+L E CW D + RPSF +IL +L I
Sbjct: 234 PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 147/279 (52%), Gaps = 11/279 (3%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
++D D + IG GSFG + +A W G+ VA+K IL + +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMK 89
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA---LSPSTAVNFALDIARG 152
+LRHPNIV F+GAVT+ L ++TEYL G L++ L + GA L ++ A D+A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
M YLHN I+HRDLK N+L+ +KV DFGLS+L + G+
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYT--VKVCDFGLSRL----KASXFLXSKXAAGTP 203
Query: 213 RYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MAPEV + ++K DV+SF +IL+E+ + P N P + V + +
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEK-IKETLP 310
P++ + E CW + +RPSF I+ L IK +P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 147/279 (52%), Gaps = 11/279 (3%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
++D D + IG GSFG + +A W G+ VA+K IL + +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMK 89
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA---LSPSTAVNFALDIARG 152
+LRHPNIV F+GAVT+ L ++TEYL G L++ L + GA L ++ A D+A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
M YLHN I+HR+LK N+L+ +KV DFGLS+L + G+
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYT--VKVCDFGLSRL----KASTFLSSKSAAGTP 203
Query: 213 RYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MAPEV + ++K DV+SF +IL+E+ + P N P + V + +
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEK-IKETLP 310
P++ + E CW + +RPSF I+ L IK +P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 147/278 (52%), Gaps = 19/278 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
W IDPSEL F IG G FG + YW VAIK I + + +DF E +
Sbjct: 3 WVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEV 56
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
++KL HP +VQ G E+ P+ L+TE++ G L YL+ ++G + T + LD+ G
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGS 211
MAYL E +IHRDL RN L+ + +KV DFG+++ + D Y TG
Sbjct: 117 MAYL--EEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFP 168
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKP 227
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + + ++ CW RP+F +L++L +I E+
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 19/278 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
W IDPSEL F IG G FG + YW VAIK I + + +DF E +
Sbjct: 5 WVIDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEV 58
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
++KL HP +VQ G E+ P+ L+ E++ G L YL+ ++G + T + LD+ G
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 118
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGS 211
MAYL E +IHRDL RN L+ + +KV DFG+++ + D Y TG
Sbjct: 119 MAYL--EEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFP 170
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++
Sbjct: 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKP 229
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + + ++ CW RP+F +L++L +I E+
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 148/280 (52%), Gaps = 24/280 (8%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVK 96
ID E++ ++G+G+FG + KA WR VAIK+I S S+ + I + R L +
Sbjct: 6 IDYKEIEVEE--VVGRGAFGVVCKAKWRAKDVAIKQI-ESESERKAFIVELRQ----LSR 58
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGAL---SPSTAVNFALDIARGM 153
+ HPNIV+ GA P+ L+ EY GG L+ L L + + A+++ L ++G+
Sbjct: 59 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 154 AYLHN-EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
AYLH+ +P +IHRDLKP N+LLV + LK+ DFG + I+ MT GS
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLV-AGGTVLKICDFGTACDIQTH-------MTNNKGSA 168
Query: 213 RYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANY--EPYEAAKYVAEGHRPFFRA 270
+MAPEVF+ Y +K DVFS+ +IL+E++ P + V G RP
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-I 227
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
K + L +CW+ D +QRPS +I+K + + P
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 267
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 148/280 (52%), Gaps = 24/280 (8%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVK 96
ID E++ ++G+G+FG + KA WR VAIK+I S S+ + I + R L +
Sbjct: 5 IDYKEIEVEE--VVGRGAFGVVCKAKWRAKDVAIKQI-ESESERKAFIVELRQ----LSR 57
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGAL---SPSTAVNFALDIARGM 153
+ HPNIV+ GA P+ L+ EY GG L+ L L + + A+++ L ++G+
Sbjct: 58 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 154 AYLHN-EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
AYLH+ +P +IHRDLKP N+LLV + LK+ DFG + I+ MT GS
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLV-AGGTVLKICDFGTACDIQTH-------MTNNKGSA 167
Query: 213 RYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANY--EPYEAAKYVAEGHRPFFRA 270
+MAPEVF+ Y +K DVFS+ +IL+E++ P + V G RP
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-I 226
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
K + L +CW+ D +QRPS +I+K + + P
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 147/277 (53%), Gaps = 21/277 (7%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILP-SLSDDRLVIQDFRHEVNLL 94
IDPSEL F IG G FG + YW VAIK I S+S+D DF E ++
Sbjct: 24 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-----DFIEEAEVM 76
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARGM 153
+KL HP +VQ G E+ P+ L+ E++ G L YL+ ++G + T + LD+ GM
Sbjct: 77 MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM 136
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGSY 212
AYL E +IHRDL RN L+ + +KV DFG+++ + D Y TG
Sbjct: 137 AYL--EEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFPV 188
Query: 213 RYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRAK 271
++ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++ +
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPR 247
Query: 272 GFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + ++ CW RP+F +L++L +I E+
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 19/276 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
IDPSEL F IG G FG + YW VAIK I + + +DF E +++
Sbjct: 2 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMM 55
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARGMA 154
KL HP +VQ G E+ P+ L+ E++ G L YL+ ++G + T + LD+ GMA
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGSYR 213
YL E +IHRDL RN L+ + +KV DFG+++ + D Y TG +
Sbjct: 116 YL--EEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFPVK 167
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++ +
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRL 226
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + ++ CW RP+F +L++L +I E+
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 19/276 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
IDPSEL F IG G FG + YW VAIK I + + +DF E +++
Sbjct: 4 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMM 57
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARGMA 154
KL HP +VQ G E+ P+ L+ E++ G L YL+ ++G + T + LD+ GMA
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGSYR 213
YL E +IHRDL RN L+ + +KV DFG+++ + D Y TG +
Sbjct: 118 YL--EEACVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFPVK 169
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRL 228
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + ++ CW RP+F +L++L +I E+
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 145/276 (52%), Gaps = 23/276 (8%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
W ++ EL + IGKG FG+++ +RG VA+K I + Q F E +++
Sbjct: 1 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 53
Query: 95 VKLRHPNIVQFLGAVTERKP-LMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
+LRH N+VQ LG + E K L ++TEY+ G L YL+ +G L + F+LD+
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 113
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E N +HRDL RNVL+ S + KV DFGL+K + ++ D K+
Sbjct: 114 AMEYL--EGNNFVHRDLAARNVLV--SEDNVAKVSDFGLTK--EASSTQDTGKL-----P 162
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + +K+ K DV+SF ++L+E+ G P + V +G++
Sbjct: 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAP 221
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
G P + E+ + CW D RPSFL + ++LE IK
Sbjct: 222 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 145/276 (52%), Gaps = 23/276 (8%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
W ++ EL + IGKG FG+++ +RG VA+K I + Q F E +++
Sbjct: 16 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 68
Query: 95 VKLRHPNIVQFLGAVTERKP-LMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
+LRH N+VQ LG + E K L ++TEY+ G L YL+ +G L + F+LD+
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 128
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E N +HRDL RNVL+ S + KV DFGL+K + ++ D K+
Sbjct: 129 AMEYL--EGNNFVHRDLAARNVLV--SEDNVAKVSDFGLTK--EASSTQDTGKL-----P 177
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + +K+ K DV+SF ++L+E+ G P + V +G++
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAP 236
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
G P + E+ + CW D RPSFL + ++LE IK
Sbjct: 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 19/276 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYW-RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
IDPSEL F IG G FG + YW VAIK I + + +DF E +++
Sbjct: 4 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMM 57
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARGMA 154
KL HP +VQ G E+ P+ L+ E++ G L YL+ ++G + T + LD+ GMA
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGSYR 213
YL E +IHRDL RN L+ + +KV DFG+++ + D Y TG +
Sbjct: 118 YL--EEASVIHRDLAARNCLVGENQV--IKVSDFGMTRFVL----DDQYTSSTGTKFPVK 169
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+ +PEVF +Y K DV+SF ++++E+ EG+ P N E + ++ G R ++ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRL 228
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + ++ CW RP+F +L++L I +
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 143/276 (51%), Gaps = 23/276 (8%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
W ++ EL + IGKG FG+++ +RG VA+K I + Q F E +++
Sbjct: 7 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 59
Query: 95 VKLRHPNIVQFLGAVTERKP-LMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
+LRH N+VQ LG + E K L ++TEY+ G L YL+ +G L + F+LD+
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 119
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E N +HRDL RNVL+ S + KV DFGL+K + ++ D K+
Sbjct: 120 AMEYL--EGNNFVHRDLAARNVLV--SEDNVAKVSDFGLTK--EASSTQDTGKL-----P 168
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + + K DV+SF ++L+E+ G P + V +G++
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAP 227
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
G P + E+ + CW D RPSFL + ++LE IK
Sbjct: 228 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 23/276 (8%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
W ++ EL + IGKG FG+++ +RG VA+K I + Q F E +++
Sbjct: 188 WALNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCI-----KNDATAQAFLAEASVM 240
Query: 95 VKLRHPNIVQFLGAVTERK-PLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
+LRH N+VQ LG + E K L ++TEY+ G L YL+ +G L + F+LD+
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 300
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E N +HRDL RNVL+ S + KV DFGL+K + ++ D K+
Sbjct: 301 AMEYL--EGNNFVHRDLAARNVLV--SEDNVAKVSDFGLTK--EASSTQDTGKL-----P 349
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + +K+ K DV+SF ++L+E+ G P + V +G++
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-MDAP 408
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
G P + ++ + CW D RP+FL + ++LE I+
Sbjct: 409 DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 147/278 (52%), Gaps = 18/278 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGT------PVAIKRILPSLSDDRLVIQDFRH 89
EI PS + + +IG G FGE+ K + + PVAIK + ++ + V DF
Sbjct: 40 EIHPSCV--TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLG 95
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GALSPSTAVNFALD 148
E ++ + H NI++ G +++ KP+M+ITEY+ G L K+L+EK G S V
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
IA GM YL N V HRDL RN+ LVNS+ KV DFGLS++++ + Y +G
Sbjct: 156 IAAGMKYLANMNYV--HRDLAARNI-LVNSNL-VCKVSDFGLSRVLE-DDPEATYTTSGG 210
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ APE +RK+ DV+SF ++++E++ GE P +E K + +G R
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-L 269
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+ +L +CW + +RP F DI+ L+K+
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 138/265 (52%), Gaps = 19/265 (7%)
Query: 50 IGKGSFGEILKAYWRG--TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+G+FGE+ R T VA+K +L D + F E +L + HPNIV+ +G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LKAKFLQEARILKQYSHPNIVRLIG 179
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
T+++P+ ++ E ++GGD +L+ +GA L T + D A GM YL E IHR
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL--ESKCCIHR 237
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG--ETGSYRYMAPEVFKHRK 224
DL RN L+ + LK+ DFG+S+ + + VY +G ++ APE + +
Sbjct: 238 DLAARNCLVTEKNV--LKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 225 YDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRELTE 282
Y + DV+SF ++L+E G P N + ++V +G R P+ + L E
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPELCPDAVFRLME 349
Query: 283 KCWAADMNQRPSFLDILKRLEKIKE 307
+CWA + QRPSF I + L+ I++
Sbjct: 350 QCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 19/265 (7%)
Query: 50 IGKGSFGEILKAYWRG--TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+G+FGE+ R T VA+K +L D + F E +L + HPNIV+ +G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LKAKFLQEARILKQYSHPNIVRLIG 179
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
T+++P+ ++ E ++GGD +L+ +GA L T + D A GM YL E IHR
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL--ESKCCIHR 237
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG--ETGSYRYMAPEVFKHRK 224
DL RN L+ + LK+ DFG+S+ + + V +G ++ APE + +
Sbjct: 238 DLAARNCLVTEKNV--LKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 225 YDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRELTE 282
Y + DV+SF ++L+E G P N + ++V +G R P+ + L E
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR--LPCPELCPDAVFRLME 349
Query: 283 KCWAADMNQRPSFLDILKRLEKIKE 307
+CWA + QRPSF I + L+ I++
Sbjct: 350 QCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 27/272 (9%)
Query: 50 IGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVI----QDFRHEVNLLVKLRHPNIV 103
IGKG FG + K + VAIK ++ S+ + Q+F+ EV ++ L HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 QFLGAVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ G + P ++ E++ GDL H+ L + + S + LDIA G+ Y+ N+
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 163 IIHRDLKPRNVLLVN---SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I+HRDL+ N+ L + ++ KV DFGLS+ V+ ++G G++++MAPE
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSVHSVSGLLGNFQWMAPET 197
Query: 220 F--KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV----AEGHRPFFRAKGF 273
+ Y +K D +SFAMILY +L GE P Y Y K++ EG RP +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREEGLRPTI-PEDC 255
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P LR + E CW+ D +RP F I+K L ++
Sbjct: 256 PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 19/263 (7%)
Query: 50 IGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G FG + W+G VA+K I S+S+D +F E ++KL HP +V+F G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-----EFFQEAQTMMKLSHPKLVKFYG 70
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKG-ALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
++ P+ ++TEY+ G L YL+ G L PS + D+ GMA+L E + IHR
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL--ESHQFIHR 128
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-KMTGETGSYRYMAPEVFKHRKY 225
DL RN L+ +KV DFG+++ + D Y G ++ APEVF + KY
Sbjct: 129 DLAARNCLVDRDLC--VKVSDFGMTRYV----LDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 226 DKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKC 284
K DV++F ++++E+ G+ P Y E V++GHR +R + + ++ C
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR-LYRPHLASDTIYQIMYSC 241
Query: 285 WAADMNQRPSFLDILKRLEKIKE 307
W +RP+F +L +E ++E
Sbjct: 242 WHELPEKRPTFQQLLSSIEPLRE 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 27/272 (9%)
Query: 50 IGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVI----QDFRHEVNLLVKLRHPNIV 103
IGKG FG + K + VAIK ++ S+ + Q+F+ EV ++ L HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 QFLGAVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ G + P ++ E++ GDL H+ L + + S + LDIA G+ Y+ N+
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 163 IIHRDLKPRNVLLVN---SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I+HRDL+ N+ L + ++ KV DFG S+ V+ ++G G++++MAPE
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-------QSVHSVSGLLGNFQWMAPET 197
Query: 220 F--KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV----AEGHRPFFRAKGF 273
+ Y +K D +SFAMILY +L GE P Y Y K++ EG RP +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREEGLRPTI-PEDC 255
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P LR + E CW+ D +RP F I+K L ++
Sbjct: 256 PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 27/272 (9%)
Query: 50 IGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVI----QDFRHEVNLLVKLRHPNIV 103
IGKG FG + K + VAIK ++ S+ + Q+F+ EV ++ L HPNIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 104 QFLGAVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ G + P ++ E++ GDL H+ L + + S + LDIA G+ Y+ N+
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 163 IIHRDLKPRNVLLVN---SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I+HRDL+ N+ L + ++ KV DF LS+ V+ ++G G++++MAPE
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSVHSVSGLLGNFQWMAPET 197
Query: 220 F--KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV----AEGHRPFFRAKGF 273
+ Y +K D +SFAMILY +L GE P Y Y K++ EG RP +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREEGLRPTI-PEDC 255
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P LR + E CW+ D +RP F I+K L ++
Sbjct: 256 PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 146/283 (51%), Gaps = 33/283 (11%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G FGE+ + W+ + + + +L +D + +++F E ++
Sbjct: 6 WEMERT--DITMKHKLGGGQFGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 61
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E IHRDL RN L+ +HL KV DFGLS+L MTG+T +
Sbjct: 122 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRL-----------MTGDTXT 165
Query: 212 --------YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
++ APE + K+ K DV++F ++L+E+ G P +P + + + +
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+R R +G ++ EL CW + + RPSF +I + E +
Sbjct: 226 DYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 4 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 56
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E +HRDL RN L+ + +KV DFGLS+ + D Y T GS
Sbjct: 117 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYV----LDDEY--TSSVGS 166
Query: 212 ---YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R
Sbjct: 167 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-L 225
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+R + ++ + CW ++RP+F +L +
Sbjct: 226 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 35/286 (12%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G+G+FG++ A VA+K + + R QDF+ E LL L+H +I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 76
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------------GALSPSTAVNFAL 147
V+F G TE +PL+++ EY+R GDL+++L+ G L + A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+A GM YL +HRDL RN L+ +K+GDFG+S+ I S D Y++ G
Sbjct: 137 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV--VKIGDFGMSRDI---YSTDYYRVGG 189
Query: 208 ETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
T R+M PE +RK+ + DV+SF ++L+E+ G+ P EA + +G R
Sbjct: 190 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG-R 248
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
R + PE+ + CW + QR S D+ RL+ + + P
Sbjct: 249 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 35/286 (12%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G+G+FG++ A VA+K + + R QDF+ E LL L+H +I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 105
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------------GALSPSTAVNFAL 147
V+F G TE +PL+++ EY+R GDL+++L+ G L + A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+A GM YL +HRDL RN L+ +K+GDFG+S+ I S D Y++ G
Sbjct: 166 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV--VKIGDFGMSRDI---YSTDYYRVGG 218
Query: 208 ETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
T R+M PE +RK+ + DV+SF ++L+E+ G+ P EA + +G R
Sbjct: 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG-R 277
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
R + PE+ + CW + QR S D+ RL+ + + P
Sbjct: 278 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 3 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 55
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 115
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E +HRDL RN L+ + +KV DFGLS+ + D Y T GS
Sbjct: 116 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYV----LDDEY--TSSVGS 165
Query: 212 ---YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R
Sbjct: 166 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-L 224
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+R + ++ + CW ++RP+F +L +
Sbjct: 225 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 35/286 (12%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G+G+FG++ A VA+K + + R QDF+ E LL L+H +I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 82
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------------GALSPSTAVNFAL 147
V+F G TE +PL+++ EY+R GDL+++L+ G L + A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+A GM YL +HRDL RN L+ +K+GDFG+S+ I S D Y++ G
Sbjct: 143 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLV--VKIGDFGMSRDI---YSTDYYRVGG 195
Query: 208 ETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
T R+M PE +RK+ + DV+SF ++L+E+ G+ P EA + +G R
Sbjct: 196 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG-R 254
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
R + PE+ + CW + QR S D+ RL+ + + P
Sbjct: 255 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 300
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 10 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 62
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E +HRDL RN L+ + +KV DFGLS+ + D Y T GS
Sbjct: 123 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYV----LDDEY--TSSVGS 172
Query: 212 ---YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R
Sbjct: 173 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-L 231
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+R + ++ + CW ++RP+F +L +
Sbjct: 232 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 266
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 15/264 (5%)
Query: 49 IIGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+IG G FGE+ R PVAIK + ++ + +DF E +++ + HPNI+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNII 86
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GALSPSTAVNFALDIARGMAYLHNEPNV 162
G VT+ KP+M++TEY+ G L +LK+ G + V I+ GM YL + V
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
HRDL RN+L+ +S KV DFGLS++++ + Y G R+ APE
Sbjct: 147 --HRDLAARNILI--NSNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 223 RKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELT 281
RK+ DV+S+ ++++E++ GE P + K V EG+R L +L
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYR-LPSPMDCPAALYQLM 260
Query: 282 EKCWAADMNQRPSFLDILKRLEKI 305
CW + N RP F +I+ L+K+
Sbjct: 261 LDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 21/273 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 4 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 56
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT-GETG 210
M YL E +HRDL RN L+ + +KV DFGLS+ + D Y + G
Sbjct: 117 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYV----LDDEYTSSRGSKF 168
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R +R
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYR 227
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+ ++ + CW ++RP+F +L +
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 19 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 71
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E +HRDL RN L+ + +KV DFGLS+ + D Y T GS
Sbjct: 132 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVL----DDEY--TSSVGS 181
Query: 212 ---YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-L 240
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+R + ++ + CW ++RP+F +L +
Sbjct: 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 6 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 61
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D + G
Sbjct: 122 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTFTAHAGAKF 172
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P +P + + + + +R R
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR-MER 231
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 141/278 (50%), Gaps = 24/278 (8%)
Query: 41 ELDFSSSAI---IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVN 92
ELD S I IG G FGE+ R VAIK + ++ + +DF E +
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR--RDFLCEAS 96
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIAR 151
++ + HPN+V G VT KP+M++ E++ G L +L K G + V IA
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAA 156
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GM YL + V HRDL RN+ LVNS+ KV DFGLS++I+ + VY TG
Sbjct: 157 GMRYLADMGYV--HRDLAARNI-LVNSNL-VCKVSDFGLSRVIE-DDPEAVYTTTGGKIP 211
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR---PF 267
R+ APE ++RK+ DV+S+ ++++E++ GE P + + K + EG+R P
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPM 271
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
G L +L CW + +RP F I+ L+K+
Sbjct: 272 DCPAG----LHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 19/272 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVN 92
WEIDP +L F +G G FG + WRG VAIK I S+S+D +F E
Sbjct: 19 WEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAK 71
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIAR 151
+++ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E +HRDL RN L+ + +KV DFGLS+ + + G
Sbjct: 132 AMEYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVL---DDEETSSVGSKFP 184
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R +R
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYRP 243
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+ ++ + CW ++RP+F +L +
Sbjct: 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHE 90
EID S + +IG G FGE+ R VAIK + +D + +DF E
Sbjct: 25 EIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSE 80
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDI 149
+++ + HPNI+ G VT+ KP+M+ITEY+ G L +L K G + V I
Sbjct: 81 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 140
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
GM YL + V HRDL RN+ LVNS+ KV DFG+S++++ + Y G
Sbjct: 141 GSGMKYLSDMSAV--HRDLAARNI-LVNSNL-VCKVSDFGMSRVLE-DDPEAAYTTRGGK 195
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ APE +RK+ DV+S+ ++++E++ GE P + + K + EG+R
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR-LP 254
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW + + RP F I+ L+K+
Sbjct: 255 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHE 90
EID S + +IG G FGE+ R VAIK + +D + +DF E
Sbjct: 4 EIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSE 59
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDI 149
+++ + HPNI+ G VT+ KP+M+ITEY+ G L +L K G + V I
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 119
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
GM YL + V HRDL RN+ LVNS+ KV DFG+S++++ + Y G
Sbjct: 120 GSGMKYLSDMSYV--HRDLAARNI-LVNSNL-VCKVSDFGMSRVLE-DDPEAAYTTRGGK 174
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ APE +RK+ DV+S+ ++++E++ GE P + + K + EG+R
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR-LP 233
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW + + RP F I+ L+K+
Sbjct: 234 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHE 90
EID S + +IG G FGE+ R VAIK + +D + +DF E
Sbjct: 10 EIDASCIKIEK--VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSE 65
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDI 149
+++ + HPNI+ G VT+ KP+M+ITEY+ G L +L K G + V I
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI 125
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
GM YL + V HRDL RN+ LVNS+ KV DFG+S++++ + Y G
Sbjct: 126 GSGMKYLSDMSYV--HRDLAARNI-LVNSNL-VCKVSDFGMSRVLE-DDPEAAYTTRGGK 180
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ APE +RK+ DV+S+ ++++E++ GE P + + K + EG+R
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR-LP 239
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW + + RP F I+ L+K+
Sbjct: 240 PPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 21/279 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 12 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 67
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 128 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 182
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR--P 266
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 243 PMDCPA---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 142/279 (50%), Gaps = 21/279 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + +HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMG--FVHRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR--P 266
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 272 PMDCPA---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 29 ELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 84
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 144
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 145 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 199
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 258
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 259 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 145/283 (51%), Gaps = 33/283 (11%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 6 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 61
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +I E++ G+L YL+E + +S + A I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E IHRDL RN L+ +HL KV DFGLS+L MTG+T +
Sbjct: 122 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRL-----------MTGDTXT 165
Query: 212 --------YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
++ APE + K+ K DV++F ++L+E+ G P +P + + + +
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+R R +G ++ EL CW + + RPSF +I + E +
Sbjct: 226 DYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 39 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 94
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 154
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 155 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 209
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 268
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 269 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 13 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 179
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 238
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGL+++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLARVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 21 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 76
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 137 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 187
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 246
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 247 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 10 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 65
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 176
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 235
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 10 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 65
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 176
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 235
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 12 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 67
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 128 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 178
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 237
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 13 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 179
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 238
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 13 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 179
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 238
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TEY+ G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGL ++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLGRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 10 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 65
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 126 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAPAGAKF 176
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 235
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 236 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 9 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 64
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 125 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAPAGAKF 175
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 234
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 235 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 215 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 270
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + +S + A I+
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHR+L RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 331 MEYL--EKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 381
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 440
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 50 IGKGSFGEILKAYWRG--TPVAIKRILPS------LSDDRLVIQDFR----HEVNLLVKL 97
+G G++GE+L + + AIK I S SDD I+ F +E++LL L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
HPNI++ ++K L+TE+ GG+L + + + A N I G+ YLH
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 158 NEPNVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
I+HRD+KP N+LL N +S ++K+ DFGLS S D YK+ G+ Y+A
Sbjct: 164 KHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----SKD-YKLRDRLGTAYYIA 216
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPFFRAKGFT 274
PEV K +KY++K DV+S +I+Y +L G PP + K V +G + F K +
Sbjct: 217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 275 PELRELTEKCWAADMNQRPS 294
E +EL + D N+R +
Sbjct: 276 DEAKELIKLMLTYDYNKRCT 295
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 21/285 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 6 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 61
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A ARG
Sbjct: 62 LRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 120
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L + +K+GDFGL+ + + SH ++ +GS
Sbjct: 121 MDYLHAKS--IIHRDLKSNNIFLHEDNT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 173
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPY-EAAKYVAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP 233
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ + P+ ++ L +C ++RPSF IL +E++ L
Sbjct: 234 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 140/277 (50%), Gaps = 19/277 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
D ++GKG FG+ +K R T V + + L + D + F EV ++ L HPN
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKVMRCLEHPN 68
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSP-STAVNFALDIARGMAYLHNEP 160
+++F+G + + K L ITEY++GG L +K + P S V+FA DIA GMAYLH+
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH----------DVYKMTGETG 210
IIHRDL N L+ + ++ V DFGL++L+ + + D K G
Sbjct: 129 --IIHRDLNSHNCLVRENK--NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV-AEGHRPFFR 269
+ +MAPE+ R YD+KVDVFSF ++L E++ +Y P + G +
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC 244
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
P +T +C D +RPSF+ + LE ++
Sbjct: 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 143/276 (51%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +I E++ G+L YL+E + +S + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 143/276 (51%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 8 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 63
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +I E++ G+L YL+E + +S + A I+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 124 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 18/276 (6%)
Query: 41 ELDFSSSAI---IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVN 92
E+D S I IG G FGE+ + R VAIK + ++ + +DF E +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEAS 86
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GALSPSTAVNFALDIAR 151
++ + HPN++ G VT+ P+M+ITE++ G L +L++ G + V IA
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA 146
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT-GETG 210
GM YL + V HRDL RN+ LVNS+ KV DFGLS+ ++ S Y G
Sbjct: 147 GMKYLADMNYV--HRDLAARNI-LVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
R+ APE ++RK+ DV+S+ ++++E++ GE P + + + + +R
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR-LPP 261
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 262 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 21/279 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 12 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 67
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TE + G L +L++ A + V I
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 128 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 182
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR--P 266
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 243 PMDCPA---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TE + G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGAV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 153/293 (52%), Gaps = 37/293 (12%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WEI+ SE+ S+ IG GSFG + K W G VA+K IL + Q FR+EV +L
Sbjct: 31 WEIEASEVMLSTR--IGSGSFGTVYKGKWHGD-VAVK-ILKVVDPTPEQFQAFRNEVAVL 86
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARGM 153
K RH NI+ F+G +T + L ++T++ G L+K+L ++ ++ A A+GM
Sbjct: 87 RKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGM 145
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSY 212
YLH + IIHRD+K N+ L +K+GDFGL+ + + S V + TGS
Sbjct: 146 DYLHAKN--IIHRDMKSNNIFL--HEGLTVKIGDFGLATVKSRWSGSQQVEQ---PTGSV 198
Query: 213 RYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
+MAPEV + + + + DV+S+ ++LYE++ GE P ++ + F
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--------IFMV 250
Query: 270 AKGF-TPELRELTEKC------WAADM-----NQRPSFLDILKRLEKIKETLP 310
+G+ +P+L +L + C AD +RP F IL +E ++ +LP
Sbjct: 251 GRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 145/283 (51%), Gaps = 33/283 (11%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 13 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E IHRDL RN L+ +HL KV DFGLS+L MTG+T +
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRL-----------MTGDTXT 172
Query: 212 --------YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
++ APE + K+ K DV++F ++L+E+ G P + + + + +
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+R R +G ++ EL CW + + RPSF +I + E +
Sbjct: 233 DYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
E+D + + S ++G G FGE+ + VAIK + ++ + +DF E
Sbjct: 41 ELDATNI--SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGE 96
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDI 149
+++ + HPNI++ G VT+ KP+M++TE + G L +L++ A + V I
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 156
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL + V HRDL RN+ L+NS+ KV DFGLS++++ + Y G
Sbjct: 157 ASGMKYLSDMGYV--HRDLAARNI-LINSNL-VCKVSDFGLSRVLE-DDPEAAYTTRGGK 211
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ +PE +RK+ DV+S+ ++L+E++ GE P + K V EG+R
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR-LP 270
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 212 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 267
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHR+L RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 328 MEYL--EKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 378
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 437
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 438 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 138/273 (50%), Gaps = 25/273 (9%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILP-SLSDDRLVIQDFRHEVNLL 94
IDP +L F +G G FG + WRG VAIK I S+S+D +F E ++
Sbjct: 1 IDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVM 53
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ L H +VQ G T+++P+ +ITEY+ G L YL+E + + D+ M
Sbjct: 54 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM 113
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS-- 211
YL E +HRDL RN L+ + +KV DFGLS+ + D Y T GS
Sbjct: 114 EYL--ESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYV----LDDEY--TSSVGSKF 163
Query: 212 -YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
R+ PEV + K+ K D+++F ++++E+ G+ P + E A+++A+G R +R
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR-LYR 222
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+ ++ + CW ++RP+F +L +
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 21/285 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 18 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 73
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A ARG
Sbjct: 74 LRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL-SKLIKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L + +K+GDFGL ++ + SH ++ +GS
Sbjct: 133 MDYLHAKS--IIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQL---SGS 185
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEA-AKYVAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP 245
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ + P+ ++ L +C ++RPSF IL +E++ L
Sbjct: 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 144/276 (52%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 254 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 309
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +ITE++ G+L YL+E + ++ + A I+
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHR+L RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 370 MEYL--EKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 420
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 479
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 480 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 143/276 (51%), Gaps = 19/276 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 13 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +I E++ G+L YL+E + ++ + A I+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKM-TGETG 210
M YL E IHRDL RN L+ +HL KV DFGLS+L+ + D Y G
Sbjct: 129 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM----TGDTYTAHAGAKF 179
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + K+ K DV++F ++L+E+ G P + + + + + +R R
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MER 238
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G ++ EL CW + + RPSF +I + E +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 21/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 18 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 73
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A ARG
Sbjct: 74 LRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL-SKLIKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L + +K+GDFGL ++ + SH ++ +GS
Sbjct: 133 MDYLHAKS--IIHRDLKSNNIFLHEDNT--VKIGDFGLATEKSRWSGSHQFEQL---SGS 185
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEA-AKYVAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP 245
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKI 305
+ + P+ ++ L +C ++RPSF IL +E++
Sbjct: 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 4 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 59
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 60 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 118
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 119 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 171
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 232 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 7 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 62
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 63 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 122 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 174
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 19/268 (7%)
Query: 35 WEIDPSELDFSSSAII---GKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHE 90
W+ D E+ S ++ G G FGE+ Y+ T VA+K + P + +Q F E
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEE 58
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK--EKGALSPSTAVNFALD 148
NL+ L+H +V+ VT +P+ +ITEY+ G L +LK E G + ++F+
Sbjct: 59 ANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 118
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
IA GMAY+ E IHRDL+ NVL+ S + K+ DFGL+++I+ ++ G
Sbjct: 119 IAEGMAYI--ERKNYIHRDLRAANVLV--SESLMCKIADFGLARVIE---DNEYTAREGA 171
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++ APE + K DV+SF ++LYE++ G+ P + +++G+R
Sbjct: 172 KFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYR-M 230
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSF 295
R + EL ++ + CW +RP+F
Sbjct: 231 PRVENCPDELYDIMKMCWKEKAEERPTF 258
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 33/283 (11%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ + W+ + + + +L +D + +++F E ++
Sbjct: 9 WEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 64
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P +I E++ G+L YL+E + ++ + A I+
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M YL E IHRDL RN L+ +HL KV DFGLS+L MTG+T +
Sbjct: 125 MEYL--EKKNFIHRDLAARNCLV---GENHLVKVADFGLSRL-----------MTGDTXT 168
Query: 212 --------YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
++ APE + K+ K DV++F ++L+E+ G P + + + + +
Sbjct: 169 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 228
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+R R +G ++ EL CW + + RPSF +I + E +
Sbjct: 229 DYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 29 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 84
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 85 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 143
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 144 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 196
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 256
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 257 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 305
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 30 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 85
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A A+G
Sbjct: 86 LRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 145 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 197
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 306
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 18/276 (6%)
Query: 41 ELDFSSSAI---IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVN 92
E+D S I IG G FGE+ + R VAIK + ++ + +DF E +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEAS 60
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GALSPSTAVNFALDIAR 151
++ + HPN++ G VT+ P+M+ITE++ G L +L++ G + V IA
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAA 120
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT-GETG 210
GM YL + V HR L RN+ LVNS+ KV DFGLS+ ++ S Y G
Sbjct: 121 GMKYLADMNYV--HRALAARNI-LVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
R+ APE ++RK+ DV+S+ ++++E++ GE P + + + + +R
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYR-LPP 235
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F I+ L+K+
Sbjct: 236 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 139/275 (50%), Gaps = 17/275 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
WE++ + D + +G G +GE+ W+ + + + +L +D + +++F E ++
Sbjct: 27 WEMERT--DITMKHKLGGGQYGEVYVGVWKKYSLTVA--VKTLKEDTMEVEEFLKEAAVM 82
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
+++HPN+VQ LG T P ++TEY+ G+L YL+E + ++ + A I+
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA 142
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM-TGETGS 211
M YL E IHRDL RN L+ + +KV DFGLS+L+ + D Y G
Sbjct: 143 MEYL--EKKNFIHRDLAARNCLVGENHV--VKVADFGLSRLM----TGDTYTAHAGAKFP 194
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + + K DV++F ++L+E+ G P + + + +G+R +
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYR-MEQP 253
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+G P++ EL CW RPSF + + E +
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
EI+ S + IIG G GE+ R PVAIK + ++ + +DF E
Sbjct: 45 EIEASRIHIEK--IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSE 100
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDI 149
+++ + HPNI++ G VT + M++TEY+ G L +L+ G + V +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
GM YL + V HRDL RNVL+ ++ KV DFGLS++++ + Y TG
Sbjct: 161 GAGMRYLSDLGYV--HRDLAARNVLVDSNLV--CKVSDFGLSRVLE-DDPDAAYTTTGGK 215
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ APE R + DV+SF ++++E+L GE P N + V EG+R
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR-LP 274
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
G L +L CW D QRP F I+ L+ +
Sbjct: 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 150/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 22 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 77
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 78 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 136
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL-SKLIKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL ++ + SH ++ +GS
Sbjct: 137 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQL---SGS 189
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 249
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 250 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 298
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 30 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 85
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A A+G
Sbjct: 86 LRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 144
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL-SKLIKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL ++ + SH ++ +GS
Sbjct: 145 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQL---SGS 197
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+ + P+ ++ L +C ++RP F IL +E + +LP H
Sbjct: 258 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIH 306
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 149/286 (52%), Gaps = 21/286 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 2 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 57
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 58 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 117 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 169
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
+ + P+ ++ L +C ++RP F IL +E + +LP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 149/286 (52%), Gaps = 21/286 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 7 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 62
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 63 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 122 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 174
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
+ + P+ ++ L +C ++RP F IL +E + +LP
Sbjct: 235 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 146/283 (51%), Gaps = 30/283 (10%)
Query: 50 IGKGSFGEI-LKAYWRGTPVAIKRILP--SLSDDRLVI-QDFRHEVNLLVKLRHPNIVQF 105
+G+G+FG++ L + +P K ++ +L D L +DF+ E LL L+H +IV+F
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLK----------------EKGALSPSTAVNFALDI 149
G + PL+++ EY++ GDL+K+L+ KG L S ++ A I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL ++ +HRDL RN L+ + +K+GDFG+S+ + S D Y++ G T
Sbjct: 143 ASGMVYLASQH--FVHRDLATRNCLV--GANLLVKIGDFGMSRDV---YSTDYYRVGGHT 195
Query: 210 G-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+M PE +RK+ + DV+SF +IL+E+ G+ P E + + +G R
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG-RVL 254
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
R + E+ ++ CW + QR + +I K L + + P
Sbjct: 255 ERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 21/286 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 2 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 57
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T + L ++T++ G L+ +L + ++ A A+G
Sbjct: 58 LRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL+ + + SH ++ +GS
Sbjct: 117 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQL---SGS 169
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
+ + P+ ++ L +C ++RP F IL +E + +LP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 149/286 (52%), Gaps = 21/286 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
DWEI ++ IG GSFG + K W G VA+K +L + +Q F++EV +
Sbjct: 2 DWEIPDGQITVGQR--IGSGSFGTVYKGKWHGD-VAVK-MLNVTAPTPQQLQAFKNEVGV 57
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDIARG 152
L K RH NI+ F+G T+ + L ++T++ G L+ +L + ++ A A+G
Sbjct: 58 LRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL-SKLIKVQNSHDVYKMTGETGS 211
M YLH + IIHRDLK N+ L +K+GDFGL ++ + SH ++ +GS
Sbjct: 117 MDYLHAKS--IIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQL---SGS 169
Query: 212 YRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAEGHRP- 266
+MAPEV + + Y + DV++F ++LYE++ G+ P +N + + V G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 267 -FFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
+ + P+ ++ L +C ++RP F IL +E + +LP
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFRHE 90
EI+ S + IIG G GE+ R PVAIK + ++ + +DF E
Sbjct: 45 EIEASRIHIEK--IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSE 100
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDI 149
+++ + HPNI++ G VT + M++TEY+ G L +L+ G + V +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGV 160
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
GM YL + V HRDL RNVL+ ++ KV DFGLS++++ + TG
Sbjct: 161 GAGMRYLSDLGYV--HRDLAARNVLVDSNLV--CKVSDFGLSRVLE-DDPDAAXTTTGGK 215
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFF 268
R+ APE R + DV+SF ++++E+L GE P N + V EG+R
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYR-LP 274
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
G L +L CW D QRP F I+ L+ +
Sbjct: 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI + +G G FGE+ Y+ T VA+K + P + +Q F E NL
Sbjct: 7 WEIPRESIKLVKK--LGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEEANL 60
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK--EKGALSPSTAVNFALDIAR 151
+ L+H +V+ VT+ +P+ +ITE++ G L +LK E G + ++F+ IA
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E IHRDL+ NVL+ S + K+ DFGL+++I+ ++ G
Sbjct: 121 GMAYI--ERKNYIHRDLRAANVLV--SESLMCKIADFGLARVIE---DNEYTAREGAKFP 173
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + K +V+SF ++LYE++ G+ P + +++G+R R
Sbjct: 174 IKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYR-MPRM 232
Query: 271 KGFTPELRELTEKCWAADMNQRPSF 295
+ EL ++ + CW +RP+F
Sbjct: 233 ENCPDELYDIMKMCWKEKAEERPTF 257
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 33/284 (11%)
Query: 50 IGKGSFGEI-LKAYWRGTP------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G+G+FG++ L + P VA+K + + + R +DF E LL L+H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR---KDFHREAELLTNLQHEHI 77
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG-------------ALSPSTAVNFALDI 149
V+F G E PL+++ EY++ GDL+K+L+ G L+ S ++ A I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL ++ +HRDL RN L+ + +K+GDFG+S+ + S D Y++ G T
Sbjct: 138 AAGMVYLASQH--FVHRDLATRNCLVGENLL--VKIGDFGMSRDVY---STDYYRVGGHT 190
Query: 210 G-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+M PE +RK+ + DV+S ++L+E+ G+ P E + + +G R
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-RVL 249
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
R + E+ EL CW + + R + I L+ + + P
Sbjct: 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 21/273 (7%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+DP EL F+ IGKGSFGE+ K T VAIK I L + I+D + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVL 59
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + ++ G+ + L +I EYL GG L E G L + +I +G+
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD 118
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYR 213
YLH+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+
Sbjct: 119 YLHSEKK--IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTF-----VGTPF 169
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+MAPEV K YD K D++S + E+ GEPP + P + + + + P +
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG-NY 228
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
+ L+E E C +N+ PSF K L K K
Sbjct: 229 SKPLKEFVEAC----LNKEPSFRPTAKELLKHK 257
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 21/273 (7%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+DP EL F+ IGKGSFGE+ K T VAIK I L + I+D + E+ +L
Sbjct: 23 MDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVL 79
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + ++ G+ + L +I EYL GG L E G L + +I +G+
Sbjct: 80 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD 138
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYR 213
YLH+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+
Sbjct: 139 YLHSEKK--IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNTF-----VGTPF 189
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+MAPEV K YD K D++S + E+ GEPP + P + + + + P +
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG-NY 248
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
+ L+E E C +N+ PSF K L K K
Sbjct: 249 SKPLKEFVEAC----LNKEPSFRPTAKELLKHK 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 21/273 (7%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+DP EL F+ IGKGSFGE+ K T VAIK I L + I+D + E+ +L
Sbjct: 3 LDPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVL 59
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + ++ G+ + L +I EYL GG L E G L + +I +G+
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLD 118
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYR 213
YLH+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+
Sbjct: 119 YLHSEKK--IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNXF-----VGTPF 169
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+MAPEV K YD K D++S + E+ GEPP + P + + + + P +
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG-NY 228
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
+ L+E E C +N+ PSF K L K K
Sbjct: 229 SKPLKEFVEAC----LNKEPSFRPTAKELLKHK 257
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 86
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 147 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 199
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 260 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ ++GKGSFGE++ K G A+K I + + EV LL +L HPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
I++ ++ L+ E GG+L + + S A + G+ Y+H N
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK--N 169
Query: 162 VIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLKP N+LL + S D ++++ DFGLS + KM + G+ Y+APEV
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEVL 224
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
H YD+K DV+S +ILY +L G PP Y+ K V +G F
Sbjct: 225 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 270
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ ++GKGSFGE++ K G A+K I + + EV LL +L HPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
I++ ++ L+ E GG+L + + S A + G+ Y+H N
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK--N 145
Query: 162 VIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLKP N+LL + S D ++++ DFGLS + KM + G+ Y+APEV
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEVL 200
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
H YD+K DV+S +ILY +L G PP Y+ K V +G F
Sbjct: 201 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 78
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 139 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 191
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 252 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 85
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 146 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 198
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 93
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 206
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 267 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 93
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ + +
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLAR--DIHHIDXXK 207
Query: 204 KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
K T ++MAPE R Y + DV+SF ++L+E+ G P E K + E
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
GHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 268 GHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ ++GKGSFGE++ K G A+K I + + EV LL +L HPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
I++ ++ L+ E GG+L + + S A + G+ Y+H N
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK--N 168
Query: 162 VIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLKP N+LL + S D ++++ DFGLS + KM + G+ Y+APEV
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEVL 223
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
H YD+K DV+S +ILY +L G PP Y+ K V +G F
Sbjct: 224 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 93
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 206
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 267 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 93
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 206
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 267 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 150/303 (49%), Gaps = 43/303 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---YWRG----TPVAIKRILPSLSDDRLVIQDF 87
WE L + +G+G FG+++KA + +G T VA+K + + S L +D
Sbjct: 18 WEFPRKNLVLGKT--LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL--RDL 73
Query: 88 RHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------------- 133
E N+L ++ HP++++ GA ++ PL+LI EY + G L +L+E
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 134 ----------KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
+ AL+ ++FA I++GM YL ++HRDL RN+L+ + +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILV--AEGRKM 189
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
K+ DFGLS+ + ++S+ V + G ++MA E Y + DV+SF ++L+E++
Sbjct: 190 KISDFGLSRDVYEEDSY-VKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 244 -GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
G P P + GHR R + E+ L +CW + ++RP F DI K L
Sbjct: 248 LGGNPYPGIPPERLFNLLKTGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
Query: 303 EKI 305
EK+
Sbjct: 307 EKM 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 50 IGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
+G+G+FG+++ A G T VA+K + ++ L D E+ ++ + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKMIGKH 82
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPSTAV 143
NI+ LGA T+ PL +I EY G+L +YL+ + LS V
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DFGL++ I + D Y
Sbjct: 143 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADFGLARDI---HHIDYY 195
Query: 204 KMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVA 261
K T ++MAPE R Y + DV+SF ++L+E+ G P E K +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 256 EGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE+ L +G+G+FG+++ A G T VA+K + ++ L
Sbjct: 64 WELPRDRLVLGKP--LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--S 119
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
LS V+ A +ARGM YL ++ IHRDL RNVL+ + +K+ DF
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNV--MKIADF 235
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I + D YK T ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 236 GLARDI---HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 293 PYPGVPVEELFKLLKEGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSLSDDRLVIQDFRHE 90
EID S + +IG G FGE+ + + + VAIK + ++ + ++F E
Sbjct: 10 EIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSE 65
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDI 149
+++ + HPNI++ G VT P+M++TE++ G L +L+ G + V I
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 125
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT-GE 208
A GM YL V HRDL RN+ LVNS+ KV DFGLS+ ++ +S Y + G
Sbjct: 126 ASGMRYLAEMSYV--HRDLAARNI-LVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
R+ APE RK+ D +S+ ++++E++ GE P + + + + +R
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR-L 240
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F ++ L+K+
Sbjct: 241 PPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 48 AIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
++GKGSFGE+LK R T A+K I + + ++ R EV LL KL HPNI++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKL 86
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIH 165
+ + ++ E GG+L + ++ S A + G+ Y+H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--IVH 144
Query: 166 RDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
RDLKP N+LL + D +K+ DFGLS + QN+ KM G+ Y+APEV +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNT----KMKDRIGTAYYIAPEVLRG-T 198
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
YD+K DV+S +ILY +L G PP Y+ K V G F
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLV 95
DP EL F+ IGKGSFGE+ K T VAIK I L + I+D + E+ +L
Sbjct: 19 DPEEL-FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLS 75
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+ P + ++ G+ + L +I EYL GG L E G L + +I +G+ Y
Sbjct: 76 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDY 134
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYRY 214
LH+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+ +
Sbjct: 135 LHSEKK--IHRDIKAANVLL--SEHGEVKLADFGVAGQLTDTQIKRNXF-----VGTPFW 185
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFT 274
MAPEV K YD K D++S + E+ GEPP + P + + + + P ++
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG-NYS 244
Query: 275 PELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
L+E E C +N+ PSF K L K K
Sbjct: 245 KPLKEFVEAC----LNKEPSFRPTAKELLKHK 272
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ ++GKGSFGE++ K G A+K I + + EV LL +L HPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
I++ ++ L+ E GG+L + + S A + G+ Y+H N
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK--N 151
Query: 162 VIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLKP N+LL + S D ++++ DFGLS + KM + G+ Y+APEV
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEVL 206
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
H YD+K DV+S +ILY +L G PP Y+ K V +G F
Sbjct: 207 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 252
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 19/288 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 81
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 141 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 254
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHH 314
+ P+ L E+ KCW RPSF +++ R+ I T +H+
Sbjct: 255 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 77
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 138 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 192
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 48 AIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
++GKGSFGE+LK R T A+K I + + ++ R EV LL KL HPNI++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKL 86
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIH 165
+ + ++ E GG+L + ++ S A + G+ Y+H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--IVH 144
Query: 166 RDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
RDLKP N+LL + D +K+ DFGLS + QN+ KM G+ Y+APEV +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNT----KMKDRIGTAYYIAPEVLRG-T 198
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
YD+K DV+S +ILY +L G PP Y+ K V G F
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 74
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 135 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 189
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 79
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 140 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 194
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 249
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 48 AIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
++GKGSFGE+LK R T A+K I + + ++ R EV LL KL HPNI++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIMKL 86
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIH 165
+ + ++ E GG+L + ++ S A + G+ Y+H I+H
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN--IVH 144
Query: 166 RDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
RDLKP N+LL + D +K+ DFGLS + QN+ KM G+ Y+APEV +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNT----KMKDRIGTAYYIAPEVLRG-T 198
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
YD+K DV+S +ILY +L G PP Y+ K V G F
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 80
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 141 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 195
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 250
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 19/288 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 20 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 77
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 136
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 137 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 250
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHH 314
+ P+ L E+ KCW RPSF +++ R+ I T +H+
Sbjct: 251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 298
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 19/288 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 82
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 142 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 255
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHH 314
+ P+ L E+ KCW RPSF +++ R+ I T +H+
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 303
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 92
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 153 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 207
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 74
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 135 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 189
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 81
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 142 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 196
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 251
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 92
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 153 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 207
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 72
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 133 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 187
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 242
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 105
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 166 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 220
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 275
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 73
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 134 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 188
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 243
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 43/303 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---YWRG----TPVAIKRILPSLSDDRLVIQDF 87
WE L + +G+G FG+++KA + +G T VA+K + + S L +D
Sbjct: 18 WEFPRKNLVLGKT--LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL--RDL 73
Query: 88 RHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------------- 133
E N+L ++ HP++++ GA ++ PL+LI EY + G L +L+E
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 134 ----------KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
+ AL+ ++FA I++GM YL ++HRDL RN+L+ + +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILV--AEGRKM 189
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
K+ DFGLS+ + ++S V + G ++MA E Y + DV+SF ++L+E++
Sbjct: 190 KISDFGLSRDVYEEDSX-VKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 244 -GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
G P P + GHR R + E+ L +CW + ++RP F DI K L
Sbjct: 248 LGGNPYPGIPPERLFNLLKTGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
Query: 303 EKI 305
EK+
Sbjct: 307 EKM 309
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 19/279 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSLSDDRLVIQDFRHE 90
EID S + +IG G FGE+ + + + VAIK + ++ + ++F E
Sbjct: 12 EIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSE 67
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALDI 149
+++ + HPNI++ G VT P+M++TE++ G L +L+ G + V I
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI 127
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A GM YL V HRDL RN+ LVNS+ KV DFGLS+ ++ +NS D + +
Sbjct: 128 ASGMRYLAEMSYV--HRDLAARNI-LVNSNL-VCKVSDFGLSRFLE-ENSSDPTETSSLG 182
Query: 210 GS--YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRP 266
G R+ APE RK+ D +S+ ++++E++ GE P + + + + +R
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR- 241
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L +L CW D N RP F ++ L+K+
Sbjct: 242 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 78
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 139 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 193
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 248
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 43/303 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---YWRG----TPVAIKRILPSLSDDRLVIQDF 87
WE L + +G+G FG+++KA + +G T VA+K + + S L +D
Sbjct: 18 WEFPRKNLVLGKT--LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL--RDL 73
Query: 88 RHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------------- 133
E N+L ++ HP++++ GA ++ PL+LI EY + G L +L+E
Sbjct: 74 LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 134 ----------KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
+ AL+ ++FA I++GM YL ++HRDL RN+L+ + +
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILV--AEGRKM 189
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
K+ DFGLS+ + ++S V + G ++MA E Y + DV+SF ++L+E++
Sbjct: 190 KISDFGLSRDVYEEDSX-VKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 244 -GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
G P P + GHR R + E+ L +CW + ++RP F DI K L
Sbjct: 248 LGGNPYPGIPPERLFNLLKTGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
Query: 303 EKI 305
EK+
Sbjct: 307 EKM 309
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 20/283 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL 93
+W+I +L+ +IGKG FG++ W G VAI R++ D+ ++ F+ EV
Sbjct: 27 EWDIPFEQLEIGE--LIGKGRFGQVYHGRWHGE-VAI-RLIDIERDNEDQLKAFKREVMA 82
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARG 152
+ RH N+V F+GA L +IT +G L+ +++ K L + A +I +G
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
M YLH + I+H+DLK +NV N G F +S +++ D K+ + G
Sbjct: 143 MGYLHAKG--ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRRED--KLRIQNGWL 198
Query: 213 RYMAPEVFKHRK---------YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY-VAE 262
++APE+ + + K DVF+ I YE+ E P +P EA + +
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT-QPAEAIIWQMGT 257
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
G +P G E+ ++ CWA + +RP+F ++ LEK+
Sbjct: 258 GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 19/289 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 80
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 140 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 253
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHW 315
+ P+ L E+ KCW RPSF +++ R+ I T +H +
Sbjct: 254 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHEF 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + +++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 130/265 (49%), Gaps = 19/265 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G G FGE+ W G T VAIK + P + + F E +
Sbjct: 4 WEIPRESLQLIKR--LGNGQFGEVWMGTWNGNTKVAIKTLKPG----TMSPESFLEEAQI 57
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK--EKGALSPSTAVNFALDIAR 151
+ KL+H +VQ V+E +P+ ++TEY+ G L +LK E AL V+ A +A
Sbjct: 58 MKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E IHRDL+ N+L+ N K+ DFGL++LI+ ++ G
Sbjct: 117 GMAYI--ERMNYIHRDLRSANILVGNGLI--CKIADFGLARLIE---DNEXTARQGAKFP 169
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E++ +G P E + V G+R
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-MPCP 228
Query: 271 KGFTPELRELTEKCWAADMNQRPSF 295
+ L EL CW D +RP+F
Sbjct: 229 QDCPISLHELMIHCWKKDPEERPTF 253
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 4 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFL 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 119 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 171
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 230
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 74
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 135 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESL 189
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 4 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 119 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 171
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 230
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 32 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 87
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 147 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 199
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 258
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 259 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 299
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 9 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 64
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 124 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 176
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 235
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 236 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 7 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 62
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 122 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 174
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 233
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 234 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 274
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 77
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI E+L G L +YL K K + + + I +GM YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 138 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 192
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 1 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 56
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 116 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 168
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 227
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 228 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 6 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFL 61
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 121 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 173
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 232
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 233 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 273
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 4 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFL 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ S+ D +K+GDFGLS+ ++ YK +
Sbjct: 119 QLSTALAYL--ESKRFVHRDIAARNVLV--SATDCVKLGDFGLSRYME---DSTYYKASK 171
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 230
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 132/267 (49%), Gaps = 17/267 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+DP EL F+ IGKGSFGE+ K T VAIK I L + I+D + E+ +L
Sbjct: 15 VDPEEL-FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVL 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P I ++ G+ + L +I EYL GG LK G L + +I +G+
Sbjct: 72 SQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLD 130
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYR 213
YLH+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+
Sbjct: 131 YLHSERK--IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNXF-----VGTPF 181
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+MAPEV K YD K D++S + E+ +GEPP ++ P + + P +
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHS 241
Query: 274 TPELRELTEKCWAADMNQRPSFLDILK 300
P +E E C D RP+ ++LK
Sbjct: 242 KP-FKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 148/308 (48%), Gaps = 41/308 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G FG+++ A G VA+K + ++ L
Sbjct: 17 WEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 72
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNV--MKIADF 188
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 189 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 246 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
Query: 307 ETLPTDHH 314
TL T+
Sbjct: 305 -TLTTNQE 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 75
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL K K + + + I +GM YL +
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHR+L RN+L+ N + +K+GDFGL+K++ + K GE+ + Y APE
Sbjct: 136 --YIHRNLATRNILVENE--NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESL 190
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 245
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 246 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYK-MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 384 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFL 439
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ YK +
Sbjct: 499 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTYYKASK 551
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 610
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 611 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G FG+++ A G VA+K + ++ L
Sbjct: 19 WEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 74
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 190
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 191 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 248 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G FG+++ A G VA+K + ++ L
Sbjct: 22 WEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 77
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 193
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 194 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 251 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRG----TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL- 97
D +IG+G+FG++LKA + AIKR+ S D +DF E+ +L KL
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 83
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPST 141
HPNI+ LGA R L L EY G+L +L++ LS
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
++FA D+ARGM YL + IHRDL RN+L+ + K+ DFGLS+ +
Sbjct: 144 LLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYV--AKIADFGLSR------GQE 193
Query: 202 VY-KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKY 259
VY K T R+MA E + Y DV+S+ ++L+E++ G P E +
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 260 VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
+ +G+R + E+ +L +CW +RPSF IL L ++ E T
Sbjct: 254 LPQGYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 83
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 143 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 256
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 257 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 307
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 30 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 87
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 146
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 147 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 260
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 261 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 311
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 82
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 142 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 255
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 306
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 43 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 100
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 159
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 160 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 215
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 273
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 274 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 138/281 (49%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 384 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFL 439
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ S+ D +K+GDFGLS+ ++ YK +
Sbjct: 499 QLSTALAYL--ESKRFVHRDIAARNVLV--SATDCVKLGDFGLSRYME---DSTYYKASK 551
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 610
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 611 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 23 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 80
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 139
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 140 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 253
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 254 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 304
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 39/308 (12%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP 247
GL++ + N K T ++MAPE R Y + DV+SF ++++E+ G P
Sbjct: 202 GLAR--DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 248 LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 260 YPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL- 317
Query: 308 TLPTDHHW 315
TL T+ +
Sbjct: 318 TLTTNEEY 325
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 82
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 142 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 255
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 306
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 25 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 82
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 141
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 142 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 255
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 39/308 (12%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP 247
GL++ + N K T ++MAPE R Y + DV+SF ++++E+ G P
Sbjct: 202 GLAR--DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 248 LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 260 YPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL- 317
Query: 308 TLPTDHHW 315
TL T+ +
Sbjct: 318 TLTTNEEY 325
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G FG+++ A G VA+K + ++ L
Sbjct: 76 WEFPRDKLTLGKP--LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 131
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 247
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 248 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 305 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 22 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 79
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 138
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 139 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 252
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 253 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 26 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 83
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 142
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 143 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 256
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 257 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 307
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 44 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 101
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 160
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 161 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 216
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 274
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 275 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPV----AIKRILPSLSDDRLVIQDFRHEVNLLVKL- 97
D +IG+G+FG++LKA + + AIKR+ S D +DF E+ +L KL
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 73
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPST 141
HPNI+ LGA R L L EY G+L +L++ LS
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
++FA D+ARGM YL + IHRDL RN+L+ + K+ DFGLS+ +
Sbjct: 134 LLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYV--AKIADFGLSR------GQE 183
Query: 202 VY-KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKY 259
VY K T R+MA E + Y DV+S+ ++L+E++ G P E +
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
Query: 260 VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
+ +G+R + E+ +L +CW +RPSF IL L ++ E T
Sbjct: 244 LPQGYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 42/289 (14%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S + ++DF E+ +L L+H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH---LRDFEREIEILKSLQHDNIV 77
Query: 104 QFLGAVTE--RKPLMLITEYLRGGDLHKYLKEKGA-LSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L LI EYL G L YL+ + + + I +GM YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
IHRDL RN+L+ N + +K+GDFGL+K++ K GE+ + Y APE
Sbjct: 138 --YIHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESL 192
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAKYVA---EGHRPFF----- 268
K+ DV+SF ++LYE+ + + P P E + + +G F
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 269 --------RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
R G E+ + +CW ++NQRPSF D+ R+++I++ +
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 19/291 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 84 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 141
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 200
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM +L ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 201 VAKGMKFLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 314
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNI 317
+ P+ L E+ KCW RPSF +++ R+ I T +H+ ++
Sbjct: 315 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 17 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 74
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 133
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + + V+ TG
Sbjct: 134 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 247
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 248 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 290
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I EY G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +++ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MRIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 141/283 (49%), Gaps = 19/283 (6%)
Query: 37 IDPSELDFSSSAIIGKGSFG-----EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
I PS L + +IG+G FG +L + A+K L ++D V Q F E
Sbjct: 24 IGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-LNRITDIGEVSQ-FLTEG 81
Query: 92 NLLVKLRHPNIVQFLGAV--TERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFALD 148
++ HPN++ LG +E PL+++ Y++ GDL +++ E + + F L
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQ 140
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A+GM YL ++ +HRDL RN +L +KV DFGL++ + + V+ TG
Sbjct: 141 VAKGMKYLASKK--FVHRDLAARNCMLDEKFT--VKVADFGLARDMYDKEXXSVHNKTGA 196
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKYVAEGHRPF 267
++MA E + +K+ K DV+SF ++L+E M G PP + ++ Y+ +G R
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-- 254
Query: 268 FRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEKIKETL 309
+ P+ L E+ KCW RPSF +++ R+ I T
Sbjct: 255 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 139/282 (49%), Gaps = 31/282 (10%)
Query: 49 IIGKGSFGEILKAYWR---GTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
I+G+G FG +++ + GT VA+K + S R I++F E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR-EIEEFLSEAACMKDFSHPNVI 99
Query: 104 QFLGAVTER------KPLMLITEYLRGGDLHKYLK----EKGA--LSPSTAVNFALDIAR 151
+ LG E KP M+I +++ GDLH YL E G + T + F +DIA
Sbjct: 100 RLLGVCIEMSSQGIPKP-MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GM YL N +HRDL RN +L + + V DFGLSK I S D Y+ G
Sbjct: 159 GMEYLSNRN--FLHRDLAARNCMLRDDMT--VCVADFGLSKKIY---SGDYYR-QGRIAK 210
Query: 212 Y--RYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFF 268
+++A E R Y K DV++F + ++E+ G P + +E Y+ GHR
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR-LK 269
Query: 269 RAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
+ + EL E+ CW D RP+F + +LEK+ E+LP
Sbjct: 270 QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 110/227 (48%), Gaps = 11/227 (4%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ ++GKGSFGE++ K G A+K I + + EV LL +L HPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
I + ++ L+ E GG+L + + S A + G+ Y H N
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK--N 145
Query: 162 VIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLKP N+LL + S D ++++ DFGLS + K + G+ Y+APEV
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-----KXKDKIGTAYYIAPEVL 200
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
H YD+K DV+S +ILY +L G PP Y+ K V +G F
Sbjct: 201 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 246
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWR-----GTPVAIKRILPSLSDDRLVIQDFR 88
D+EI ++ IG+G FG++ + + VAIK SD V + F
Sbjct: 4 DYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS--VREKFL 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSPSTAVNFAL 147
E + + HP+IV+ +G +TE P+ +I E G+L +L+ K +L ++ + +A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
++ +AYL E +HRD+ RNVL+ SS D +K+GDFGLS+ ++ K +
Sbjct: 119 QLSTALAYL--ESKRFVHRDIAARNVLV--SSNDCVKLGDFGLSRYME---DSTXXKASK 171
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRP 266
++MAPE R++ DV+ F + ++E+L G P + + + G R
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER- 230
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P L L KCWA D ++RP F ++ +L I E
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 271
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 15/268 (5%)
Query: 50 IGKGSFGEILKAYWR----GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
+G G+FG + + +R VAIK + ++ ++ E ++ +L +P IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIARGMAYLHNEPNVII 164
+G V + + LML+ E GG LHK+L K P + V L ++ GM YL E +
Sbjct: 76 IG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL--EEKNFV 132
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
HRDL RNVLLVN + K+ DFGLSK + +S+ + G+ ++ APE RK
Sbjct: 133 HRDLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKW-PLKWYAPECINFRK 189
Query: 225 YDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEK 283
+ + DV+S+ + ++E L G+ P + E ++ +G R + PEL L
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE-CPPELYALMSD 248
Query: 284 CWAADMNQRPSFLDILKRLEKIKETLPT 311
CW RP FL + +R+ +L +
Sbjct: 249 CWIYKWEDRPDFLTVEQRMRACYYSLAS 276
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I Y G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPV----AIKRILPSLSDDRLVIQDFRHEVNLLVKL- 97
D +IG+G+FG++LKA + + AIKR+ S D +DF E+ +L KL
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 80
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK----------------GALSPST 141
HPNI+ LGA R L L EY G+L +L++ LS
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
++FA D+ARGM YL + IHR+L RN+L+ + K+ DFGLS+ +
Sbjct: 141 LLHFAADVARGMDYLSQKQ--FIHRNLAARNILVGENYV--AKIADFGLSR------GQE 190
Query: 202 VY-KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKY 259
VY K T R+MA E + Y DV+S+ ++L+E++ G P E +
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 250
Query: 260 VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
+ +G+R + E+ +L +CW +RPSF IL L ++ E T
Sbjct: 251 LPQGYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 301
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 40/299 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---------TPVAIKRILPSLSDDRLVIQ 85
WE +L +G+G+FG+++ A G VA+K + ++ L
Sbjct: 30 WEFPRDKLTLGKP--LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--S 85
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK---------- 134
D E+ ++ + +H NI+ LGA T+ PL +I Y G+L +YL+ +
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++ V+ +ARGM YL ++ IHRDL RNVL+ ++ +K+ DF
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNV--MKIADF 201
Query: 189 GLSKLIKVQNSHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
GL++ I N+ D YK T ++MAPE R Y + DV+SF ++++E+ G
Sbjct: 202 GLARDI---NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 247 PLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
P E K + EGHR + T EL + CW A +QRP+F +++ L++I
Sbjct: 259 PYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 73 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 129
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DL RNVLLV + + K+ DFGLSK ++ ++ + G+ ++ APE + K+
Sbjct: 130 DLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYYKFS 186
Query: 227 KKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCW 285
K DV+SF ++++E G+ P + E + +G R A G E+ +L CW
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLCW 245
Query: 286 AADMNQRPSFLDILKRL 302
D+ RP F + RL
Sbjct: 246 TYDVENRPGFAAVELRL 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 13 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 66
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 126 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 178
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 237
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 15 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 68
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 69 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 128 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 180
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 239
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTF 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 8 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 61
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 62 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 121 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 173
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 232
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPTF 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 75 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 131
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DL RNVLLV + + K+ DFGLSK ++ ++ + G+ ++ APE + K+
Sbjct: 132 DLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYYKFS 188
Query: 227 KKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCW 285
K DV+SF ++++E G+ P + E + +G R A G E+ +L CW
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLCW 247
Query: 286 AADMNQRPSFLDILKRL 302
D+ RP F + RL
Sbjct: 248 TYDVENRPGFAAVELRL 264
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 437 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 493
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DL RNVLLV + + K+ DFGLSK ++ ++ + G+ ++ APE + K+
Sbjct: 494 DLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYYKFS 550
Query: 227 KKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCW 285
K DV+SF ++++E G+ P + E + +G R A G E+ +L CW
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLCW 609
Query: 286 AADMNQRPSFLDILKRL 302
D+ RP F + RL
Sbjct: 610 TYDVENRPGFAAVELRL 626
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAI------IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQD 86
EI P E+ + +G G+FG + K Y++ +IL + ++D + +
Sbjct: 13 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 72
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFA 146
E N++ +L +P IV+ +G + E + ML+ E G L+KYL++ + +
Sbjct: 73 LLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 131
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
++ GM YL E + +HRDL RNVLLV + + K+ DFGLSK ++ ++ +
Sbjct: 132 HQVSMGMKYL--EESNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
G+ ++ APE + K+ K DV+SF ++++E G+ P + E + +G R
Sbjct: 188 GKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 246
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
A G E+ +L CW D+ RP F + RL
Sbjct: 247 MGCPA-GCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 16 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 69
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 70 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 129 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 181
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 240
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPTF 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 7 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 60
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 120 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 172
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 231
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAI------IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQD 86
EI P E+ + +G G+FG + K Y++ +IL + ++D + +
Sbjct: 5 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 64
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFA 146
E N++ +L +P IV+ +G + E + ML+ E G L+KYL++ + +
Sbjct: 65 LLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 123
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
++ GM YL E + +HRDL RNVLLV + + K+ DFGLSK ++ ++ +
Sbjct: 124 HQVSMGMKYL--EESNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
G+ ++ APE + K+ K DV+SF ++++E G+ P + E + +G R
Sbjct: 180 GKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 238
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
A G E+ +L CW D+ RP F + RL
Sbjct: 239 MGCPA-GCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 2 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 55
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 56 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 115 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEYTAREGAKF 167
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 226
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 438 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 494
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DL RNVLLV + + K+ DFGLSK ++ ++ + G+ ++ APE + K+
Sbjct: 495 DLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYYKFS 551
Query: 227 KKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCW 285
K DV+SF ++++E G+ P + E + +G R A G E+ +L CW
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLCW 610
Query: 286 AADMNQRPSFLDILKRL 302
D+ RP F + RL
Sbjct: 611 TYDVENRPGFAAVELRL 627
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 7 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 60
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 120 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 172
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 231
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 79 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 135
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DL RNVLLV + + K+ DFGLSK ++ ++ + G+ ++ APE + K+
Sbjct: 136 DLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTHGKW-PVKWYAPECINYYKFS 192
Query: 227 KKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCW 285
K DV+SF ++++E G+ P + E + +G R A G E+ +L CW
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLCW 251
Query: 286 AADMNQRPSFLDILKRL 302
D+ RP F + RL
Sbjct: 252 TYDVENRPGFAAVELRL 268
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 17 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 70
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 71 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 130 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEYTAREGAKF 182
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 241
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 242 PDNCPEELYQLMRLCWKERPEDRPTF 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 9 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 62
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 63 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 122 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEXTAREGAKF 174
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 233
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPTF 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 7 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 60
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 120 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEYTAREGAKF 172
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 231
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 13 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 66
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 67 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 126 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEYTAREGAKF 178
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 237
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAI------IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQD 86
EI P E+ + +G G+FG + K Y++ +IL + ++D + +
Sbjct: 15 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 74
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFA 146
E N++ +L +P IV+ +G + E + ML+ E G L+KYL++ + +
Sbjct: 75 LLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
++ GM YL E + +HRDL RNVLLV + + K+ DFGLSK ++ ++ +
Sbjct: 134 HQVSMGMKYL--EESNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
G+ ++ APE + K+ K DV+SF ++++E G+ P + E + +G R
Sbjct: 190 GKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
A G E+ +L CW D+ RP F + RL
Sbjct: 249 MGCPA-GCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 36 EIDPSELDFSSSAI------IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQD 86
EI P E+ + +G G+FG + K Y++ +IL + ++D + +
Sbjct: 15 EIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE 74
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFA 146
E N++ +L +P IV+ +G + E + ML+ E G L+KYL++ + +
Sbjct: 75 LLAEANVMQQLDNPYIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
++ GM YL E + +HRDL RNVLLV + + K+ DFGLSK ++ ++ +
Sbjct: 134 HQVSMGMKYL--EESNFVHRDLAARNVLLV--TQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHR 265
G+ ++ APE + K+ K DV+SF ++++E G+ P + E + +G R
Sbjct: 190 GKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
A G E+ +L CW D+ RP F + RL
Sbjct: 249 MGCPA-GCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 4 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 57
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 58 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 117 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 169
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 227
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 228 PPECPESLHDLMCQCWRKDPEERPTF 253
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 12 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 65
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 66 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ ++ G
Sbjct: 125 EGMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DNEYTAREGAKF 177
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 236
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRPTF 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 180 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPG----NMSPEAFLQEAQV 233
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 234 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL +LI+ ++ G
Sbjct: 293 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLGRLIE---DNEYTARQGAKFP 345
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 403
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 404 PPECPESLHDLMCQCWRKDPEERPTF 429
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 2 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 55
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 56 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 115 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 167
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 225
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 226 PPECPESLHDLMCQCWRKDPEERPTF 251
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 46 SSAIIGKGSFGEILKA-YWRGTPVAIKRILPSLS--DDRLVIQDFRHEVNLLVKLRHPNI 102
S +IGKG FG + Y I+ + SLS + ++ F E L+ L HPN+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 103 VQFLGAVTERKPL-MLITEYLRGGDLHKYLKEKGALSPSTA--VNFALDIARGMAYLHNE 159
+ +G + + L ++ Y+ GDL ++++ +P+ ++F L +ARGM YL +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAEQ 143
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
+HRDL RN +L S +KV DFGL++ I + + V + ++ A E
Sbjct: 144 K--FVHRDLAARNCMLDESFT--VKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 220 FKHRKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-L 277
+ ++ K DV+SF ++L+E+L G PP + +P++ ++A+G R + P+ L
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR--LPQPEYCPDSL 257
Query: 278 RELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHH 314
++ ++CW AD RP+F ++ +E+I L DH+
Sbjct: 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 129/258 (50%), Gaps = 13/258 (5%)
Query: 50 IGKGSFGEILKAYWR---GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+G G+FG + K Y++ +IL + ++D + + E N++ +L +P IV+ +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
G + E + ML+ E G L+KYL++ + + ++ GM YL E + +HR
Sbjct: 79 G-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL--EESNFVHR 135
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK-MTGETGSYRYMAPEVFKHRKY 225
DL RNVLLV + + K+ DFGLSK ++ + YK T ++ APE + K+
Sbjct: 136 DLAARNVLLV--TQHYAKISDFGLSKALRA--DENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 226 DKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKC 284
K DV+SF ++++E G+ P + E + +G R A G E+ +L C
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA-GCPREMYDLMNLC 250
Query: 285 WAADMNQRPSFLDILKRL 302
W D+ RP F + RL
Sbjct: 251 WTYDVENRPGFAAVELRL 268
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 18/270 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL 97
D + I+G+G FGE+ + + VA+K + D + F E ++ L
Sbjct: 9 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 66
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYL 156
HP+IV+ +G + E +P +I E G+L YL + K +L T V ++L I + MAYL
Sbjct: 67 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
E +HRD+ RN+L+ +S + +K+GDFGLS+ I+ D YK + ++M+
Sbjct: 126 --ESINCVHRDIAVRNILV--ASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMS 178
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
PE R++ DV+ FA+ ++E+L G+ P E + + +G R + P
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR-LPKPDLCPP 237
Query: 276 ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L L +CW D + RP F +++ L +
Sbjct: 238 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 18/270 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL 97
D + I+G+G FGE+ + + VA+K + D + F E ++ L
Sbjct: 25 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 82
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYL 156
HP+IV+ +G + E +P +I E G+L YL + K +L T V ++L I + MAYL
Sbjct: 83 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
E +HRD+ RN+L+ +S + +K+GDFGLS+ I+ D YK + ++M+
Sbjct: 142 --ESINCVHRDIAVRNILV--ASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMS 194
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
PE R++ DV+ FA+ ++E+L G+ P E + + +G R + P
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR-LPKPDLCPP 253
Query: 276 ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L L +CW D + RP F +++ L +
Sbjct: 254 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 136/270 (50%), Gaps = 18/270 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL 97
D + I+G+G FGE+ + + VA+K + D + F E ++ L
Sbjct: 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNL 70
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYL 156
HP+IV+ +G + E +P +I E G+L YL + K +L T V ++L I + MAYL
Sbjct: 71 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
E +HRD+ RN+L+ +S + +K+GDFGLS+ I+ D YK + ++M+
Sbjct: 130 --ESINCVHRDIAVRNILV--ASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMS 182
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
PE R++ DV+ FA+ ++E+L G+ P E + + +G R + P
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR-LPKPDLCPP 241
Query: 276 ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
L L +CW D + RP F +++ L +
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLAAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ K+RH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 3 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 56
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 57 MKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 116 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEXTARQGAKFP 168
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 226
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 227 PPECPESLHDLMCQCWRKEPEERPTF 252
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 179 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 232
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 292 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 344
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 402
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 179 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 232
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 292 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 344
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 402
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 135/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 7 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G+++K L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 123 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 172
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 229
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 15/268 (5%)
Query: 50 IGKGSFGEILKAYWR----GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
+G G+FG + + +R VAIK + ++ ++ E ++ +L +P IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIARGMAYLHNEPNVII 164
+G V + + LML+ E GG LHK+L K P + V L ++ GM YL E +
Sbjct: 402 IG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL--EEKNFV 458
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
HR+L RNVLLVN + K+ DFGLSK + +S+ + G+ ++ APE RK
Sbjct: 459 HRNLAARNVLLVNRH--YAKISDFGLSKALGADDSYYTARSAGKW-PLKWYAPECINFRK 515
Query: 225 YDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEK 283
+ + DV+S+ + ++E L G+ P + E ++ +G R PEL L
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-MECPPECPPELYALMSD 574
Query: 284 CWAADMNQRPSFLDILKRLEKIKETLPT 311
CW RP FL + +R+ +L +
Sbjct: 575 CWIYKWEDRPDFLTVEQRMRACYYSLAS 602
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 6 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 59
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 60 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 119 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 171
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 229
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 230 PPECPESLHDLMCQCWRKEPEERPTF 255
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++ EY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKL 97
DP EL F+ IGKGSFGE+ K T + + L + I+D + E+ +L +
Sbjct: 20 DPEEL-FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
+ ++ G+ + L +I EYL GG L+ G +I +G+ YLH
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLH 137
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYRYMA 216
+E IHRD+K NVLL S +K+ DFG++ +L Q + + G+ +MA
Sbjct: 138 SEKK--IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQIKRNTF-----VGTPFWMA 188
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE 276
PEV + YD K D++S + E+ +GEPP ++ P + + + P FT
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGD-FTKS 247
Query: 277 LRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
+E + C D + RP+ ++LK +K + T +
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSY 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 19/266 (7%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVN 92
+WE+ L +G G FGE+ Y+ G T VA+K SL + F E N
Sbjct: 3 EWEVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEAN 56
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIA 150
L+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 57 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
GMA++ E IHR+L+ N+L+ S K+ DFGL++LI+ ++ G
Sbjct: 116 EGMAFI--EERNYIHRNLRAANILV--SDTLSCKIADFGLARLIE---DNEYTAREGAKF 168
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFR 269
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVR 227
Query: 270 AKGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 262 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 315
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ A IA
Sbjct: 316 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 375 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 427
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 485
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 486 PPECPESLHDLMCQCWRKEPEERPTF 511
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 134/292 (45%), Gaps = 45/292 (15%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
IG+G+FG + +A G T VA+K + S D + DF+ E L+ + +PNI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMAEFDNPNI 112
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG------------------------ALS 138
V+ LG KP+ L+ EY+ GDL+++L+ LS
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 139 PSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQN 198
+ + A +A GMAYL +HRDL RN L+ + +K+ DFGLS+ I
Sbjct: 173 CAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMV--VKIADFGLSRNIY--- 225
Query: 199 SHDVYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEA 256
S D YK G R+M PE + +Y + DV+++ ++L+E+ G P E
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
Query: 257 AKYVAEGHRPFFRAKGFTP-ELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
YV +G+ P EL L CW+ RPSF I + L+++ E
Sbjct: 286 IYYVRDGN--ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++ EY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEXTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++ EY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 10 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 63
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ + IA
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 123 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 175
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 233
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 18/279 (6%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
DP +L FS IG GSFG + A VAIK++ S QD EV L
Sbjct: 51 DPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
KLRHPN +Q+ G L+ EY G K L +G+AY
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH+ + +IHRD+K N+LL S +K+GDFG + ++ N G+ +M
Sbjct: 170 LHS--HNMIHRDVKAGNILL--SEPGLVKLGDFGSASIMAPANXF--------VGTPYWM 217
Query: 216 APEVF---KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
APEV +YD KVDV+S + E+ E +PPL N A ++A+ P ++
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 277
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
++ R + C RP+ +LK ++E PT
Sbjct: 278 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 18/279 (6%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
DP +L FS IG GSFG + A VAIK++ S QD EV L
Sbjct: 12 DPEKL-FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
KLRHPN +Q+ G L+ EY G K L +G+AY
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH+ + +IHRD+K N+LL S +K+GDFG + ++ N G+ +M
Sbjct: 131 LHS--HNMIHRDVKAGNILL--SEPGLVKLGDFGSASIMAPANXF--------VGTPYWM 178
Query: 216 APEVF---KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
APEV +YD KVDV+S + E+ E +PPL N A ++A+ P ++
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 238
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPT 311
++ R + C RP+ +LK ++E PT
Sbjct: 239 WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 10 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 63
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++TEY+ G L +LK E G L V+ + IA
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 123 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEWTARQGAKFP 175
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 233
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 234 PPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 74
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 75 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 134 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 187
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 246
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 247 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 24 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 81
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 82 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 141 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 194
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 253
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 254 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 149/297 (50%), Gaps = 41/297 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 41 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 96
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG---------AL 137
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K A+
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 138 SPSTA-----VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSK 192
+ STA ++F+ +A+GMA+L ++ IHRD+ RNVLL N K+GDFGL++
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--AKIGDFGLAR 212
Query: 193 LIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP---- 247
I + +S+ + K ++MAPE Y + DV+S+ ++L+E+ G P
Sbjct: 213 DI-MNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
Query: 248 LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK 304
L N + Y+ K + +P F K + + + CWA + RP+F I L++
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYWR------GTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E + ++G G+FG + K W PVAIK IL + + ++ F E ++
Sbjct: 14 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVE-FMDEALIM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ HP++V+ LG V + L+T+ + G L +Y+ E K + +N+ + IA+GM
Sbjct: 72 ASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ S +H+K+ DFGL++L+ + Y G +
Sbjct: 131 MYL--EERRLVHRDLAARNVLV--KSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E +RK+ + DV+S+ + ++E++ G P E + +G R +
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F ++ ++
Sbjct: 244 CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 13 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQV 66
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++ EY+ G L +LK E G L V+ A IA
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 126 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 178
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 236
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW D +RP+F
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 7 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 123 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 172
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 229
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYWR------GTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E + ++G G+FG + K W PVAIK IL + + ++ F E ++
Sbjct: 37 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIK-ILNETTGPKANVE-FMDEALIM 94
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ HP++V+ LG V + L+T+ + G L +Y+ E K + +N+ + IA+GM
Sbjct: 95 ASMDHPHLVRLLG-VCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGM 153
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ S +H+K+ DFGL++L+ + Y G +
Sbjct: 154 MYL--EERRLVHRDLAARNVLV--KSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIK 207
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E +RK+ + DV+S+ + ++E++ G P E + +G R +
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER-LPQPPI 266
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F ++ ++
Sbjct: 267 CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 19 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 74
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 135 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 184
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 241
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 242 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 12 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 67
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 182
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 183 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 241 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 128 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLCGTLDYLPPEMI 178
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 235
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 128 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTDLCGTLDYLPPEMI 178
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 235
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
+K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 5 SKRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 121 LANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTL 170
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEF 227
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 228 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 7 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 123 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTDLC 172
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 229
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 20 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 77
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 78 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 136
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 137 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 190
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 249
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 250 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 121/258 (46%), Gaps = 18/258 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVI---QDFRHEVNLLVKLRHPNIVQFL 106
IG+GSF + K T ++ L D +L Q F+ E L L+HPNIV+F
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 107 ----GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V +K ++L+TE G L YLK ++ I +G+ +LH
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLK N+ + + +K+GD GL+ L + + V G+ + APE ++
Sbjct: 152 IIHRDLKCDNIFITGPTG-SVKIGDLGLATLKRASFAKAV------IGTPEFXAPEXYEE 204
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYE-PYEAAKYVAEGHRPFFRAKGFTPELRELT 281
KYD+ VDV++F E E P + + + + V G +P K PE++E+
Sbjct: 205 -KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 282 EKCWAADMNQRPSFLDIL 299
E C + ++R S D+L
Sbjct: 264 EGCIRQNKDERYSIKDLL 281
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 5 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 121 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 170
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 227
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 50 IGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G++GE+L K G AIK I S EV +L +L HPNI++
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+++ L+ E RGG+L + + S A + G YLH I+HRD
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN--IVHRD 129
Query: 168 LKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LKP N+LL + S D L K+ DFGLS +V KM G+ Y+APEV + +KYD
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLSAHFEVGG-----KMKERLGTAYYIAPEVLR-KKYD 183
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
+K DV+S +ILY +L G PP E K V +G F
Sbjct: 184 EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 224
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 128 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTDLCGTLDYLPPEMI 178
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 235
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 74 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 133 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 246 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 4 KKRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 120 LANALSYCHSKR--VIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTL 169
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEF 226
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 74
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 75 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 134 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 187
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 246
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 247 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 7 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 123 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 172
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 229
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 74
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 75 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 134 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 187
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 246
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 247 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 128
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 129 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTDLCGTLDYLPPEMI 179
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 236
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 237 LISRLLKHNPSQRPMLREVLE 257
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 41/281 (14%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSD--DRLVIQDFRHEVNLLVKLRHP 100
+G+ FG++ K + G VAIK +L D + + ++FRHE L +L+HP
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIK----TLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYL----------------KEKGALSPSTAVN 144
N+V LG VT+ +PL +I Y GDLH++L K AL P V+
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
IA GM YL + + ++H+DL RNVL+ + ++K+ D GL + + + D YK
Sbjct: 150 LVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKL--NVKISDLGLFREVY---AADYYK 202
Query: 205 MTGET-GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
+ G + R+MAPE + K+ D++S+ ++L+E+ G P Y + + +
Sbjct: 203 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR- 261
Query: 263 GHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRL 302
+R P + L +CW ++RP F DI RL
Sbjct: 262 -NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 6 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 61
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 176
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 177 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 235 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 28 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 83
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 144 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 193
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 250
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 21/266 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP-VAIKRILPSLSDDRLVIQDFRHEVNL 93
WEI L +G+G FGE+ W GT VAIK + P + + F E +
Sbjct: 179 WEIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQV 232
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGA-LSPSTAVNFALDIAR 151
+ KLRH +VQ V+E +P+ ++ EY+ G L +LK E G L V+ A IA
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMAY+ E +HRDL+ N+L+ + KV DFGL++LI+ ++ G
Sbjct: 292 GMAYV--ERMNYVHRDLRAANILVGENLV--CKVADFGLARLIE---DNEYTARQGAKFP 344
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEM-LEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + ++ K DV+SF ++L E+ +G P E V G+R
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPC 402
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSF 295
PE L +L +CW + +RP+F
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 41/281 (14%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSD--DRLVIQDFRHEVNLLVKLRHP 100
+G+ FG++ K + G VAIK +L D + + ++FRHE L +L+HP
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIK----TLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYL----------------KEKGALSPSTAVN 144
N+V LG VT+ +PL +I Y GDLH++L K AL P V+
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
IA GM YL + + ++H+DL RNVL+ + ++K+ D GL + + + D YK
Sbjct: 133 LVAQIAAGMEYLSS--HHVVHKDLATRNVLVYDKL--NVKISDLGLFREVY---AADYYK 185
Query: 205 MTGET-GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAE 262
+ G + R+MAPE + K+ D++S+ ++L+E+ G P Y + + +
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR- 244
Query: 263 GHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRL 302
+R P + L +CW ++RP F DI RL
Sbjct: 245 -NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 1 GKRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 117 LANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTXL 166
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEF 223
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 12 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 67
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 182
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 183 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 241 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 7 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G+++K L++ + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 123 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRXXLX 172
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 229
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A R +A+K + + + V R EV + LRHP
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 126 --VIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLCGTLDYLPPEMI 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 232
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 233 LISRLLKHNPSQRPMLREVLE 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 13 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 68
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 183
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 184 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 242 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 21 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 78
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 79 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 138 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 250
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 251 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 65
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 66 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 125 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 178
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 237
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 238 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 10 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 65
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 126 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 180
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 181 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 239 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 39 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 96
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 97 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 155
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 156 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 209
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 268
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 269 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 1 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 56
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S + T
Sbjct: 117 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTTLC 166
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 223
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 224 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 41 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 96
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 157 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 211
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 212 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 269
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 270 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + T G+ Y+ PE+
Sbjct: 128 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRTELCGTLDYLPPEMI 178
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 235
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 153
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S D+ G+ Y+ PE+
Sbjct: 154 -RVIHRDIKPENLLL--GSAGELKIADFGWSVHAPSSRRDDL------CGTLDYLPPEMI 204
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 261
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 262 LISRLLKHNPSQRPMLREVLE 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 9 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 64
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 125 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 179
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 180 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 238 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 19 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 74
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 135 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 189
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 190 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 248 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 35/280 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ KL H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKLNHQNI 110
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 171 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 220
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P R +T+ CW RP+F IL+R+E +
Sbjct: 281 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 3 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 58
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S +S + T +
Sbjct: 119 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--CHAPSS----RRTTLS 168
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 225
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S D+ G+ Y+ PE+
Sbjct: 131 -RVIHRDIKPENLLL--GSAGELKIADFGWSVHAPSSRRDDL------CGTLDYLPPEMI 181
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 238
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ KL H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKLNHQNI 96
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 157 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 206
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 267 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 301
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 19 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 74
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 135 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIY- 189
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 190 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 248 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 20/268 (7%)
Query: 35 WEIDPSELDFSSSAI---IGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQDFRHE 90
WE D E+ S + +G G FGE+ + Y + T VA+K + P + ++ F E
Sbjct: 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAE 233
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSP-STAVNFALD 148
N++ L+H +V+ L AV ++P+ +ITE++ G L +LK ++G+ P ++F+
Sbjct: 234 ANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 292
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
IA GMA++ E IHRDL+ N+L+ S++ K+ DFGL+++I+ ++ G
Sbjct: 293 IAEGMAFI--EQRNYIHRDLRAANILV--SASLVCKIADFGLARVIE---DNEYTAREGA 345
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++ APE + K DV+SF ++L E++ G P E + + G+R
Sbjct: 346 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 404
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSF 295
R + EL + +CW +RP+F
Sbjct: 405 PRPENCPEELYNIMMRCWKNRPEERPTF 432
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 20/268 (7%)
Query: 35 WEIDPSELDFSSSAI---IGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQDFRHE 90
WE D E+ S + +G G FGE+ + Y + T VA+K + P + ++ F E
Sbjct: 5 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAE 60
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSP-STAVNFALD 148
N++ L+H +V+ L AV ++P+ +ITE++ G L +LK ++G+ P ++F+
Sbjct: 61 ANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
IA GMA++ E IHRDL+ N+L+ S++ K+ DFGL+++I+ ++ G
Sbjct: 120 IAEGMAFI--EQRNYIHRDLRAANILV--SASLVCKIADFGLARVIE---DNEYTAREGA 172
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++ APE + K DV+SF ++L E++ G P E + + G+R
Sbjct: 173 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 231
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSF 295
R + EL + +CW +RP+F
Sbjct: 232 PRPENCPEELYNIMMRCWKNRPEERPTF 259
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 41 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 96
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------------ 134
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 135 --GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSK 192
LS ++F+ +A+GMA+L ++ IHRD+ RNVLL N K+GDFGL++
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--AKIGDFGLAR 212
Query: 193 LIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP---- 247
I + +S+ + K ++MAPE Y + DV+S+ ++L+E+ G P
Sbjct: 213 DI-MNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
Query: 248 LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK 304
L N + Y+ K + +P F K + + + CWA + RP+F I L++
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 11 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 68
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA GM
Sbjct: 69 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 128 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 181
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 240
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 241 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 43/280 (15%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 136
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGSYR- 213
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ G YR
Sbjct: 197 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYR----AGYYRK 242
Query: 214 ---------YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEG 263
+M PE F + K D +SF ++L+E+ G P + E ++V G
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302
Query: 264 HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
R P R +T+ CW RP+F IL+R+E
Sbjct: 303 GRMDPPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 341
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 109/221 (49%), Gaps = 11/221 (4%)
Query: 50 IGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G++GE+L K G AIK I S EV +L +L HPNI++
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+++ L+ E RGG+L + + S A + G YLH I+HRD
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN--IVHRD 146
Query: 168 LKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LKP N+LL + S D L K+ DFGLS +V KM G+ Y+APEV + +KYD
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLSAHFEVGG-----KMKERLGTAYYIAPEVLR-KKYD 200
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
+K DV+S +ILY +L G PP E K V +G F
Sbjct: 201 EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSF 241
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 19/265 (7%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-TPVAIKRILPSLSDDRLVIQDFRHEVNL 93
WE+ L +G G GE+ Y+ G T VA+K SL + F E NL
Sbjct: 8 WEVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVK----SLKQGSMSPDAFLAEANL 61
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIAR 151
+ +L+H +V+ VT+ +P+ +ITEY+ G L +LK L+ + ++ A IA
Sbjct: 62 MKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMA++ E IHRDL+ N+L+ ++ + K+ DFGL++LI+ + G
Sbjct: 121 GMAFI--EERNYIHRDLRAANILVSDTLS--CKIADFGLARLIE---DAEXTAREGAKFP 173
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
++ APE + + K DV+SF ++L E++ G P E + + G+R R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRP 232
Query: 271 KGFTPELRELTEKCWAADMNQRPSF 295
EL +L CW RP+F
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 6 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 61
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN + +K+GDFG+++ I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCXVAEDFT--VKIGDFGMTRDIY- 176
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 177 --ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 235 QVLRFVMEGG--LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 43/280 (15%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 113
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGSYR- 213
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ G YR
Sbjct: 174 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYR----AGYYRK 219
Query: 214 ---------YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEG 263
+M PE F + K D +SF ++L+E+ G P + E ++V G
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 279
Query: 264 HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
R P R +T+ CW RP+F IL+R+E
Sbjct: 280 GRMDPPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 318
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + G+ Y+ PE+
Sbjct: 131 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRAALCGTLDYLPPEMI 181
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 238
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 2 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 118 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRAALC 167
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 224
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 95
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 156 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 205
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 266 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 300
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 74 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 133 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 246 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 4 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 59
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ +FG S + +S + T
Sbjct: 120 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIANFGWS--VHAPSS----RRTTLC 169
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 226
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 5 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ +FG S + +S + T
Sbjct: 121 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIANFGWS--VHAPSS----RRTTLC 170
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 227
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 2 KRQWALE----DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRR 57
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 118 ANALSYCHSKK--VIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRAALC 167
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP + K ++ R F
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS---RVEFT 224
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 110
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 171 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 220
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P R +T+ CW RP+F IL+R+E +
Sbjct: 281 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 4 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 59
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 120 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIX- 174
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D + G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 175 --ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 233 QVLRFVMEGG--LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 96
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 157 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--------DIYRASYYRKGGCA 206
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 267 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 301
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 87
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 148 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 197
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 198 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 257
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P R +T+ CW RP+F IL+R+E +
Sbjct: 258 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIEYCTQ 296
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 72
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 73 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 132 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 185
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 244
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 245 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 95
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 156 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 205
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 266 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 300
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 37/293 (12%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 33 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 88
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA---------- 136
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 137 LSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
L ++F+ +A+GMA+L ++ IHRD+ RNVLL N K+GDFGL++ I +
Sbjct: 149 LELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--AKIGDFGLARDI-M 203
Query: 197 QNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP----LANY 251
+S+ + K ++MAPE Y + DV+S+ ++L+E+ G P L N
Sbjct: 204 NDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 262
Query: 252 EPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK 304
+ Y+ K + +P F K + + + CWA + RP+F I L++
Sbjct: 263 KFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 74 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 133 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 246 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 112
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 173 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 222
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 223 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 282
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 283 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 317
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 1 GKRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 117 LANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRXXL 166
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEF 223
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 20/272 (7%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRH 89
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 4 KRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 59
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
EV + LRHPNI++ G + + LI EY G +++ L++ + ++
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 120 ANALSYCHSK--RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRXXLC 169
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFT 226
Query: 270 AKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 96
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 157 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 206
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 266
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 267 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 301
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 33/291 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ S +G+GSFG + + +G T VAIK + + S + +
Sbjct: 13 EWEVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--E 68
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-------KGALSP 139
F +E +++ + ++V+ LG V++ +P ++I E + GDL YL+ L+P
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 140 ---STAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
S + A +IA GMAYL+ N +HRDL RN ++ +K+GDFG+++ I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLN--ANKFVHRDLAARNCMVAEDFT--VKIGDFGMTRDIX- 183
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D + G+ R+M+PE K + DV+SF ++L+E+ E P
Sbjct: 184 --ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLEK 304
+ ++V EG P+ L EL CW + RPSFL+I+ +++
Sbjct: 242 QVLRFVMEGG--LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 72
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 73 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 132 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 185
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 244
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 245 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 122
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 183 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 232
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 233 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 292
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 293 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 327
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
K W ++ DF +GKG FG + A + + +A+K + + + V R
Sbjct: 4 KKRQWALE----DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL SA LK+ DFG S + +S +
Sbjct: 120 LANALSYCHSKR--VIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRXXL 169
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G+PP E K ++ R F
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEF 226
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QRP ++L+
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 35/276 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVCSEQDEL-DFLMEALIISKFNHQNI 102
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 163 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 212
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 213 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 272
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P R +T+ CW RP+F IL+R+E
Sbjct: 273 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIE 307
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 123/244 (50%), Gaps = 30/244 (12%)
Query: 34 DWEIDPSELD-----FSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQD 86
D+ ID S D F + +G+G+ + + +GT P A+K +L D ++V
Sbjct: 40 DYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK-VLKKTVDKKIV--- 95
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFA 146
R E+ +L++L HPNI++ + L+ E + GG+L + EKG S A +
Sbjct: 96 -RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKM 205
I +AYLH N I+HRDLKP N+L + D LK+ DFGLSK+++ H V M
Sbjct: 155 KQILEAVAYLHE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE----HQVL-M 207
Query: 206 TGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
G+ Y APE+ + Y +VD++S +I Y +L G +EP+ Y G +
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG------FEPF----YDERGDQ 257
Query: 266 PFFR 269
FR
Sbjct: 258 FMFR 261
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++ G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++ G+FG + K W PVAIK + + S ++ E ++
Sbjct: 21 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 78
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 79 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 138 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 250
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 251 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 75
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 76 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 135 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 188
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 247
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 248 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 74
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 75 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 134 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 187
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 246
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 247 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 71
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 72 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 131 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 184
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 243
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + +A+K + + + V R EV + LRHP
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ G + + LI EY G +++ L++ + ++A ++Y H++
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 128
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL SA LK+ DFG S + +S + G+ Y+ PE+
Sbjct: 129 -RVIHRDIKPENLLL--GSAGELKIADFGWS--VHAPSS----RRDTLCGTLDYLPPEMI 179
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPE-LRE 279
+ R +D+KVD++S ++ YE L G+PP E K ++ R F F E R+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RVEFTFPDFVTEGARD 236
Query: 280 LTEKCWAADMNQRPSFLDILK 300
L + + +QRP ++L+
Sbjct: 237 LISRLLKHNPSQRPMLREVLE 257
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
+K W ++ DF +GKG FG + A R + +A+K + + + V R
Sbjct: 5 SKRQWTLE----DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR 60
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL S LK+ DFG S + +S + T
Sbjct: 121 LANALSYCHSKR--VIHRDIKPENLLL--GSNGELKIADFGWS--VHAPSS----RRTTL 170
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G PP + E + ++ R F
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS---RVEF 227
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QR + ++L+
Sbjct: 228 TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 37/293 (12%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 41 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 96
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA---------- 136
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 137 LSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
L ++F+ +A+GMA+L ++ IHRD+ RNVLL N K+GDFGL++ I +
Sbjct: 157 LELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--AKIGDFGLARDI-M 211
Query: 197 QNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP----LANY 251
+S+ + K ++MAPE Y + DV+S+ ++L+E+ G P L N
Sbjct: 212 NDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 270
Query: 252 EPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK 304
+ Y+ K + +P F K + + + CWA + RP+F I L++
Sbjct: 271 KFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 21 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 78
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 79 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 138 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 250
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 251 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL--- 97
DF+ ++GKGSFG+++ A +GT AIK + +VIQD E ++ K
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIK-----ILKKDVVIQDDDVECTMVEKRVLA 74
Query: 98 ---RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + Q L + EY+ GGDL ++++ G AV +A +I+ G+
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+LH II+RDLK NV+L S H+K+ DFG+ K ++ D G+ Y
Sbjct: 135 FLHKRG--IIYRDLKLDNVML--DSEGHIKIADFGMCK----EHMMDGVTTREFCGTPDY 186
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
+APE+ ++ Y K VD +++ ++LYEML G+PP + E + + E
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 50/306 (16%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 26 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 81
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTA-- 142
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K L PS A
Sbjct: 82 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPG 141
Query: 143 -------------------VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
++F+ +A+GMA+L ++ IHRD+ RNVLL N
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--A 197
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
K+GDFGL++ I + +S+ + K ++MAPE Y + DV+S+ ++L+E+
Sbjct: 198 KIGDFGLARDI-MNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
Query: 244 -GEPP----LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G P L N + Y+ K + +P F K + + + CWA + RP+F I
Sbjct: 256 LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQI 311
Query: 299 LKRLEK 304
L++
Sbjct: 312 CSFLQE 317
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAI + + S ++ E ++
Sbjct: 48 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK--ANKEILDEAYVM 105
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LIT+ + G L Y++E K + +N+ + IA+GM
Sbjct: 106 ASVDNPHVCRLLG-ICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 165 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 218
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 277
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 278 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 50 IGKGSFGEILKAYWRGTP-------VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G G+FGE+ + G P VA+K LP + ++ + DF E ++ K H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVK-TLPEVYSEQDEL-DFLMEALIISKFNHQNI 110
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------GALSPSTAVNFALDIARGMAY 155
V+ +G + P ++ E + GGDL +L+E +L+ ++ A DIA G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMT----GETG 210
L E N IHRD+ RN LL + K+GDFG+++ D+Y+ + G
Sbjct: 171 L--EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--------DIYRASYYRKGGCA 220
Query: 211 --SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++M PE F + K D +SF ++L+E+ G P + E ++V G R
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 280
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
P R +T+ CW RP+F IL+R+E +
Sbjct: 281 PPKNCPGPVYRIMTQ-CWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 23/273 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G F E+ +A G PVA+K++ D D E++LL +L HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLH---KYLKEKGALSPSTAV-NFALDIARGMAYL 156
N++++ + E L ++ E GDL K+ K++ L P V + + + + ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI--KVQNSHDVYKMTGETGSYRY 214
H+ ++HRD+KP NV + + +K+GD GL + K +H + G+ Y
Sbjct: 153 HSR--RVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHSL------VGTPYY 202
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL--ANYEPYEAAKYVAEGHRPFFRAKG 272
M+PE Y+ K D++S +LYEM + P Y K + + P +
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH 262
Query: 273 FTPELRELTEKCWAADMNQRPSFL---DILKRL 302
++ ELR+L C D +RP D+ KR+
Sbjct: 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 18/271 (6%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 142
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 143 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTR 199
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 258
Query: 282 EKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+CWA RP+F+ + + + E PTD
Sbjct: 259 VQCWAHKPEDRPTFVAL---RDFLLEAQPTD 286
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 30/273 (10%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRI----LPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G G++GE+L + T V AIK I + + S+ +L+ EV +L L HPNI+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL-----EEVAVLKLLDHPNIM 99
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
+ +++ L+ E +GG+L + + + A + G+ YLH I
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN--I 157
Query: 164 IHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
+HRDLKP N+LL + D L K+ DFGLS + + Q KM G+ Y+APEV +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-----KMKERLGTAYYIAPEVLR- 211
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTE 282
+KYD+K DV+S +IL+ +L G PP E + V +G F +PE + ++E
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF-----DSPEWKNVSE 266
Query: 283 KCWAADMNQRPSFLDILKRLEKIKETLPTDHHW 315
A D+ ++ D +R I +H W
Sbjct: 267 --GAKDLIKQMLQFDSQRR---ISAQQALEHPW 294
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 45/301 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPS--LSDDRLVIQ 85
WE + L F + +G G+FG++++A G VA+K + PS L++ ++
Sbjct: 18 WEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------GALS 138
E+ +L L H NIV LGA T P ++ITEY GDL +L+ K S
Sbjct: 76 ----ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 139 PST------------AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVG 186
P+ ++F+ +A+GMA+L ++ IHRDL RN+LL + K+
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT--KIC 187
Query: 187 DFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GE 245
DFGL++ IK +S+ V K ++MAPE + Y + DV+S+ + L+E+ G
Sbjct: 188 DFGLARDIK-NDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 246 PPLANYEPYEAAKY--VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P P ++ Y + EG R + E+ ++ + CW AD +RP+F I++ +E
Sbjct: 246 SPYPGM-PVDSKFYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
Query: 304 K 304
K
Sbjct: 304 K 304
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 43/299 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE + L F + +G G+FG++++A G VA+K + + D +
Sbjct: 41 WEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EAL 96
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------------ 134
E+ ++ L +H NIV LGA T P+++ITEY GDL +L+ K
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 135 ----GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL 190
LS ++F+ +A+GMA+L ++ IHRD+ RNVLL N K+GDFGL
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHV--AKIGDFGL 212
Query: 191 SKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP-- 247
++ I + +S+ + K ++MAPE Y + DV+S+ ++L+E+ G P
Sbjct: 213 ARDI-MNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 270
Query: 248 --LANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEK 304
L N + Y+ K + +P F K + + + CWA + RP+F I L++
Sbjct: 271 GILVNSKFYKLVKDGYQMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 45/301 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPS--LSDDRLVIQ 85
WE + L F + +G G+FG++++A G VA+K + PS L++ ++
Sbjct: 41 WEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------GALS 138
E+ +L L H NIV LGA T P ++ITEY GDL +L+ K S
Sbjct: 99 ----ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 139 PST------------AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVG 186
P+ ++F+ +A+GMA+L ++ IHRDL RN+LL + K+
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT--KIC 210
Query: 187 DFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GE 245
DFGL++ IK +S+ V K ++MAPE + Y + DV+S+ + L+E+ G
Sbjct: 211 DFGLARHIK-NDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 246 PPLANYEPYEAAKY--VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P P ++ Y + EG R + E+ ++ + CW AD +RP+F I++ +E
Sbjct: 269 SPYPGM-PVDSKFYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 304 K 304
K
Sbjct: 327 K 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 45/301 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPS--LSDDRLVIQ 85
WE + L F + +G G+FG++++A G VA+K + PS L++ ++
Sbjct: 34 WEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 91
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------GALS 138
E+ +L L H NIV LGA T P ++ITEY GDL +L+ K S
Sbjct: 92 ----ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 139 PST------------AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVG 186
P+ ++F+ +A+GMA+L ++ IHRDL RN+LL + K+
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT--KIC 203
Query: 187 DFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GE 245
DFGL++ IK +S+ V K ++MAPE + Y + DV+S+ + L+E+ G
Sbjct: 204 DFGLARDIK-NDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 246 PPLANYEPYEAAKY--VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P P ++ Y + EG R + E+ ++ + CW AD +RP+F I++ +E
Sbjct: 262 SPYPGM-PVDSKFYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
Query: 304 K 304
K
Sbjct: 320 K 320
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDD--RLVIQDFRHEVNLLVK 96
E + ++G G FG + K W G + I + + D R Q + +
Sbjct: 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS 71
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAY 155
L H +IV+ LG + L L+T+YL G L ++++ +GAL P +N+ + IA+GM Y
Sbjct: 72 LDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
L E + ++HR+L RNVLL S ++V DFG++ L+ + +Y + ++M
Sbjct: 131 L--EEHGMVHRNLAARNVLL--KSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWM 184
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFT 274
A E KY + DV+S+ + ++E++ G P A E + +G R + + T
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER-LAQPQICT 243
Query: 275 PELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
++ + KCW D N RP+F ++ ++ P
Sbjct: 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 45/301 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPS--LSDDRLVIQ 85
WE + L F + +G G+FG++++A G VA+K + PS L++ ++
Sbjct: 36 WEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 93
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------GALS 138
E+ +L L H NIV LGA T P ++ITEY GDL +L+ K S
Sbjct: 94 ----ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 139 PST------------AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVG 186
P+ ++F+ +A+GMA+L ++ IHRDL RN+LL + K+
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT--KIC 205
Query: 187 DFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GE 245
DFGL++ IK +S+ V K ++MAPE + Y + DV+S+ + L+E+ G
Sbjct: 206 DFGLARDIK-NDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 246 PPLANYEPYEAAKY--VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P P ++ Y + EG R + E+ ++ + CW AD +RP+F I++ +E
Sbjct: 264 SPYPGM-PVDSKFYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
Query: 304 K 304
K
Sbjct: 322 K 322
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 14/276 (5%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDD--RLVIQDFRHEVNLLVK 96
E + ++G G FG + K W G + I + + D R Q + +
Sbjct: 30 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS 89
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAY 155
L H +IV+ LG + L L+T+YL G L ++++ +GAL P +N+ + IA+GM Y
Sbjct: 90 LDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
L E + ++HR+L RNVLL S ++V DFG++ L+ + +Y + ++M
Sbjct: 149 L--EEHGMVHRNLAARNVLL--KSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWM 202
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKGFT 274
A E KY + DV+S+ + ++E++ G P A E + +G R + + T
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER-LAQPQICT 261
Query: 275 PELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
++ + KCW D N RP+F ++ ++ P
Sbjct: 262 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 297
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 18/271 (6%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 136
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 137 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTR 193
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 252
Query: 282 EKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+CWA RP+F+ + + + E PTD
Sbjct: 253 VQCWAHKPEDRPTFVAL---RDFLLEAQPTD 280
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 45/301 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPS--LSDDRLVIQ 85
WE + L F + +G G+FG++++A G VA+K + PS L++ ++
Sbjct: 41 WEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK------GALS 138
E+ +L L H NIV LGA T P ++ITEY GDL +L+ K S
Sbjct: 99 ----ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 139 PST------------AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVG 186
P+ ++F+ +A+GMA+L ++ IHRDL RN+LL + K+
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRIT--KIC 210
Query: 187 DFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GE 245
DFGL++ IK +S+ V K ++MAPE + Y + DV+S+ + L+E+ G
Sbjct: 211 DFGLARDIK-NDSNYVVKGNARL-PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 246 PPLANYEPYEAAKY--VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLE 303
P P ++ Y + EG R + E+ ++ + CW AD +RP+F I++ +E
Sbjct: 269 SPYPGM-PVDSKFYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 304 K 304
K
Sbjct: 327 K 327
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 74 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 133 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 246 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 132
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 133 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTR 189
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 248
Query: 282 EKCWAADMNQRPSFL 296
+CWA RP+F+
Sbjct: 249 VQCWAHKPEDRPTFV 263
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 18/271 (6%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 132
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 133 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTR 189
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 248
Query: 282 EKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+CWA RP+F+ + + + E PTD
Sbjct: 249 VQCWAHKPEDRPTFVAL---RDFLLEAQPTD 276
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 128/271 (47%), Gaps = 18/271 (6%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 142
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 143 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTR 199
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 258
Query: 282 EKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+CWA RP+F+ + + + E PTD
Sbjct: 259 VQCWAHKPEDRPTFVAL---RDFLLEAQPTD 286
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDL 127
VAIK I + ++ F EV+ +L H NIV + E L+ EY+ G L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+Y++ G LS TA+NF I G+ + H+ I+HRD+KP+N+L+ S LK+ D
Sbjct: 99 SEYIESHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILI--DSNKTLKIFD 154
Query: 188 FGLSKLIK----VQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
FG++K + Q +H + G+ +Y +PE K D+ D++S ++LYEML
Sbjct: 155 FGIAKALSETSLTQTNHVL-------GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207
Query: 244 GEPPL 248
GEPP
Sbjct: 208 GEPPF 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++ G+FG + K W PVAIK + + S ++ E ++
Sbjct: 21 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 78
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 79 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 137
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFGL+KL+ + Y G +
Sbjct: 138 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIK 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 250
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 251 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 135/268 (50%), Gaps = 30/268 (11%)
Query: 35 WEIDPSELDFSSSAI---IGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQDFRHE 90
WE D E+ S + +G G FGE+ + Y + T VA+K + P + ++ F E
Sbjct: 172 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAE 227
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-EKGALSP-STAVNFALD 148
N++ L+H +V+ L AV ++P+ +ITE++ G L +LK ++G+ P ++F+
Sbjct: 228 ANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 286
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
IA GMA++ E IHRDL+ N+L+ S++ K+ DFGL+++ G
Sbjct: 287 IAEGMAFI--EQRNYIHRDLRAANILV--SASLVCKIADFGLARV-------------GA 329
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPF 267
++ APE + K DV+SF ++L E++ G P E + + G+R
Sbjct: 330 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 388
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSF 295
R + EL + +CW +RP+F
Sbjct: 389 PRPENCPEELYNIMMRCWKNRPEERPTF 416
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 75
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 76 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 135 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 188
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 247
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 248 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 140/297 (47%), Gaps = 50/297 (16%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRG---TPVAIKRILPSLSD--DRLVIQDFRH 89
WE L+F ++G G+FG+++ A G T V+I+ + L + D +
Sbjct: 40 WEFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS 97
Query: 90 EVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-------------- 134
E+ ++ +L H NIV LGA T P+ LI EY GDL YL+ K
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 135 ---------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKV 185
L+ + FA +A+GM +L E +HRDL RNVL+ + +K+
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKV--VKI 213
Query: 186 GDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-- 243
DFGL++ I + +S+ V + ++MAPE Y K DV+S+ ++L+E+
Sbjct: 214 CDFGLARDI-MSDSNYVVRGNARL-PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 244 -----GEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSF 295
G P AN+ Y+ + + +PF+ T E+ + + CWA D +RPSF
Sbjct: 272 VNPYPGIPVDANF--YKLIQNGFKMDQPFYA----TEEIYIIMQSCWAFDSRKRPSF 322
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYWRG-----TPVAIKRILPSL--SDDRLVIQDFRHEVNL 93
E F+ ++GKG FG + +A + VA+K + + S D I++F E
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD---IEEFLREAAC 78
Query: 94 LVKLRHPNIVQFLGAVTE-----RKPL-MLITEYLRGGDLHKYL------KEKGALSPST 141
+ + HP++ + +G R P+ M+I +++ GDLH +L + L T
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
V F +DIA GM YL + IHRDL RN +L + V DFGLS+ I S D
Sbjct: 139 LVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMT--VCVADFGLSRKIY---SGD 191
Query: 202 VYKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYE-MLEGEPPLANYEPYEAAKY 259
Y+ + +++A E Y DV++F + ++E M G+ P A E E Y
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251
Query: 260 VAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+ G+R + E+ +L +CW+AD QRPSF + LE I
Sbjct: 252 LIGGNR-LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL--- 97
DF+ ++GKGSFG+++ + +GT A+K + +VIQD E ++ K
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVK-----ILKKDVVIQDDDVECTMVEKRVLA 75
Query: 98 ---RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + Q L + EY+ GGDL ++++ G AV +A +IA G+
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+L ++ II+RDLK NV+L S H+K+ DFG+ K +N D G+ Y
Sbjct: 136 FLQSKG--IIYRDLKLDNVML--DSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDY 187
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
+APE+ ++ Y K VD ++F ++LYEML G+ P + E + + E
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 136
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 137 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTR 193
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 252
Query: 282 EKCWAADMNQRPSFL 296
+CWA RP+F+
Sbjct: 253 VQCWAHKPEDRPTFV 267
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL--- 97
DF+ ++GKGSFG+++ + +GT A+K + +VIQD E ++ K
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVK-----ILKKDVVIQDDDVECTMVEKRVLA 396
Query: 98 ---RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMA 154
+ P + Q L + EY+ GGDL ++++ G AV +A +IA G+
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+L ++ II+RDLK NV+L S H+K+ DFG+ K +N D G+ Y
Sbjct: 457 FLQSKG--IIYRDLKLDNVML--DSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDY 508
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
+APE+ ++ Y K VD ++F ++LYEML G+ P + E + + E
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 50 IGKGSFGEILKAYWRGTPV-AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+G G+FG++ KA + T V A +++ + S++ L +D+ E+++L HPNIV+ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKLLDA 102
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
L ++ E+ GG + + E + L+ S + YLH+ N IIHRD
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRD 160
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF-----KH 222
LK N+L +K+ DFG+S +N+ + + G+ +MAPEV K
Sbjct: 161 LKAGNILFTLDG--DIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF-RAKGFTPELRELT 281
R YD K DV+S + L EM E EPP P +A+ P + ++ ++
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 282 EKCWAADMNQRPSFLDILK 300
+KC +++ R + +L+
Sbjct: 275 KKCLEKNVDARWTTSQLLQ 293
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E +F ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ +P++ + LG + + LI + + G L Y++E K + +N+ + IA+GM
Sbjct: 74 ASVDNPHVCRLLG-ICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
YL E ++HRDL RNVL+ + H+K+ DFG +KL+ + Y G +
Sbjct: 133 NYL--EDRRLVHRDLAARNVLV--KTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E HR Y + DV+S+ + ++E++ G P E + + +G R +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D + RP F +++ K+
Sbjct: 246 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 50 IGKGSFGEILKAYWRGTPV-AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+G G+FG++ KA + T V A +++ + S++ L +D+ E+++L HPNIV+ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKLLDA 102
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
L ++ E+ GG + + E + L+ S + YLH+ N IIHRD
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRD 160
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF-----KH 222
LK N+L +K+ DFG+S +N+ + + G+ +MAPEV K
Sbjct: 161 LKAGNILFTLDG--DIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF-RAKGFTPELRELT 281
R YD K DV+S + L EM E EPP P +A+ P + ++ ++
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 282 EKCWAADMNQRPSFLDILK 300
+KC +++ R + +L+
Sbjct: 275 KKCLEKNVDARWTTSQLLQ 293
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query: 50 IGKGSFGEILKAYW-----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G GSFG + + W + VA+K + P + + DF EVN + L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
G V P+ ++TE G L L K +G T +A+ +A GM YL E
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL--ESKRF 132
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
IHRDL RN+LL ++ D +K+GDFGL + + + H V + + + + APE K R
Sbjct: 133 IHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESLKTR 189
Query: 224 KYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAA-KYVAEGHRPFFRAKGFTPELRELT 281
+ D + F + L+EM G+ P + K EG R R + ++ +
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPEDCPQDIYNVM 248
Query: 282 EKCWAADMNQRPSFL 296
+CWA RP+F+
Sbjct: 249 VQCWAHKPEDRPTFV 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 20/273 (7%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR 88
+K W ++ DF +GKG FG + A R + +A+K + + + V R
Sbjct: 5 SKRQWTLE----DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR 60
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALD 148
EV + LRHPNI++ G + + LI EY G +++ L++ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
+A ++Y H++ +IHRD+KP N+LL S LK+ DFG S + +S +
Sbjct: 121 LANALSYCHSKR--VIHRDIKPENLLL--GSNGELKIADFGWS--VHAPSS----RRDTL 170
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF 268
G+ Y+ PE+ + R +D+KVD++S ++ YE L G PP + E + ++ R F
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS---RVEF 227
Query: 269 RAKGFTPE-LRELTEKCWAADMNQRPSFLDILK 300
F E R+L + + +QR + ++L+
Sbjct: 228 TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 35/284 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+F +IG G FG++ K R G VA+KR P S + ++ RHP+
Sbjct: 40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC---RHPH 96
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF------ALDIARGMAY 155
+V +G ER ++LI +Y+ G+L ++L G+ P+ ++++ + ARG+ Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRY 214
LH IIHRD+K N+LL + K+ DFG+SK ++ +H + G G Y
Sbjct: 155 LHTR--AIIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLG---Y 207
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEA---AKYVAEGHR------ 265
+ PE F + +K DV+SF ++L+E+L + P E A++ E H
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 266 ---PFFRAKGFTPELRELTE---KCWAADMNQRPSFLDILKRLE 303
P K LR+ + KC A RPS D+L +LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 18/259 (6%)
Query: 50 IGKGSFGEILKAYWRGTPV-AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+G G+FG++ KA + T V A +++ + S++ L +D+ E+++L HPNIV+ L A
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKLLDA 102
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
L ++ E+ GG + + E + L+ S + YLH+ N IIHRD
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD--NKIIHRD 160
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF-----KH 222
LK N+L +K+ DFG+S +N+ + + G+ +MAPEV K
Sbjct: 161 LKAGNILFTLDG--DIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF-RAKGFTPELRELT 281
R YD K DV+S + L EM E EPP P +A+ P + ++ ++
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 282 EKCWAADMNQRPSFLDILK 300
+KC +++ R + +L+
Sbjct: 275 KKCLEKNVDARWTTSQLLQ 293
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
D+ IG GS+G K + + + + L S Q EVNLL +L+HPN
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVQFLGAVTERK--PLMLITEYLRGGDL----------HKYLKEKGALSPSTAVNFALDI 149
IV++ + +R L ++ EY GGDL +YL E+ L T + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
+ + + ++HRDLKP NV L ++K+GDFGL++++ +HD
Sbjct: 127 CHRRS---DGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL----NHDTSFAKAFV 177
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPF 267
G+ YM+PE Y++K D++S +LYE+ PP + E A + EG R
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+R ++ EL E+ + RPS +IL+
Sbjct: 238 YR---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+++ S+ + +
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAV 155
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 156 KVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+L+ S+ + +
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANILI--SATNAV 155
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 156 KVVDFGIARAI-ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVK 96
ID +L+F + + + GE+ K W+G + +K +L +DF E L
Sbjct: 7 IDFKQLNFLTK--LNENHSGELWKGRWQGNDIVVK-VLKVRDWSTRKSRDFNEECPRLRI 63
Query: 97 LRHPNIVQFLGAVTERKPL---MLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
HPN++ LGA + P LIT ++ G L+ L E + S AV FALD+AR
Sbjct: 64 FSHPNVLPVLGAC-QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
GMA+LH +I L R+V++ + + D S ++ G +
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS-----------FQSPGRMYA 171
Query: 212 YRYMAPEVFKHRKYD---KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVA-EGHRPF 267
++APE + + D + D++SFA++L+E++ E P A+ E VA EG RP
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT 231
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
G +P + +L + C D +RP F I+ LEK+++
Sbjct: 232 I-PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
+++ + +F +IG G FG++ K R G VA+KR P S + ++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF------ALD 148
RHP++V +G ER ++LI +Y+ G+L ++L G+ P+ ++++ +
Sbjct: 93 ---RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL--YGSDLPTMSMSWEQRLEICIG 147
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTG 207
ARG+ YLH IIHRD+K N+LL + K+ DFG+SK ++ +H + G
Sbjct: 148 AARGLHYLHTR--AIIHRDVKSINILLDENFVP--KITDFGISKKGTELGQTHLXXVVKG 203
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEA---AKYVAEGH 264
G Y+ PE F + +K DV+SF ++L+E+L + P E A++ E H
Sbjct: 204 TLG---YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 265 R---------PFFRAKGFTPELRELTE---KCWAADMNQRPSFLDILKRLE 303
P K LR+ + KC A RPS D+L +LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+ RI+ + +Q EV ++ L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + GS Y APE+F+ +KYD
Sbjct: 139 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTF-----CGSPPYAAPELFQGKKYD 190
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 246
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 247 FLILNPSKRGTLEQIMK 263
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
D+ IG GS+G K + + + + L S Q EVNLL +L+HPN
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVQFLGAVTERK--PLMLITEYLRGGDL----------HKYLKEKGALSPSTAVNFALDI 149
IV++ + +R L ++ EY GGDL +YL E+ L T + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
+ + + ++HRDLKP NV L ++K+GDFGL++++ +HD
Sbjct: 127 CHRRS---DGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL----NHDTSFAKTFV 177
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPF 267
G+ YM+PE Y++K D++S +LYE+ PP + E A + EG R
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+R ++ EL E+ + RPS +IL+
Sbjct: 238 YR---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 13/253 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVK-LRH 99
DF +IGKGSFG++L A + V A+K + + + E N+L+K ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
P +V + L + +Y+ GG+L +L+ + A +A +IA + YLH+
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I++RDLKP N+LL S H+ + DFGL K +N + G+ Y+APEV
Sbjct: 159 --NIVYRDLKPENILL--DSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRE 279
+ YD+ VD + +LYEML G PP Y A Y ++P T R
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPF--YSRNTAEMYDNILNKPLQLKPNITNSARH 268
Query: 280 LTEKCWAADMNQR 292
L E D +R
Sbjct: 269 LLEGLLQKDRTKR 281
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 110/225 (48%), Gaps = 17/225 (7%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VAIK I+ + +Q EV ++ L HPNIV+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L LI EY GG++ YL G + A + I + Y H + I+HRD
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRD 136
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S V D + GS Y APE+F+ +KYD
Sbjct: 137 LKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTF-----CGSPPYAAPELFQGKKYD 188
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFF 268
+VDV+S +ILY ++ G P E + V G PF+
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+++ S+ + +
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAV 155
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 156 KVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+K I+ + +Q EV ++ L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + GS Y APE+F+ +KYD
Sbjct: 139 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTF-----CGSPPYAAPELFQGKKYD 190
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 246
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 247 FLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+K I+ + +Q EV ++ L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + GS Y APE+F+ +KYD
Sbjct: 139 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTF-----CGSPPYAAPELFQGKKYD 190
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 246
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 247 FLILNPSKRGTLEQIMK 263
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+++ S+ + +
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAV 155
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 156 KVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 215 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 43 DFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
++ IGKG+F ++ A G VA+K I+ + +Q EV ++ L HP
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVK-IIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NIV+ + K L L+ EY GG++ YL G + A I + Y H +
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK- 133
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRDLK N+LL ++K+ DFG S V N D + GS Y APE+F
Sbjct: 134 -YIVHRDLKAENLLL--DGDMNIKIADFGFSNEFTVGNKLDTF-----CGSPPYAAPELF 185
Query: 221 KHRKYDK-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFF 268
+ +KYD +VDV+S +ILY ++ G P E + V G PF+
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 236
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+++ S+ + +
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAV 172
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 173 KVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 232 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+ RI+ + +Q EV ++ L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + GS Y APE+F+ +KYD
Sbjct: 139 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEF-----CGSPPYAAPELFQGKKYD 190
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 246
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 247 FLILNPSKRGTLEQIMK 263
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG---AVTERKPL-MLITEYLR 123
VA+K + L+ D FR E L HP IV A T PL ++ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 124 GGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
G L + +G ++P A+ D + + + H N IIHRD+KP N+++ S+ + +
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ--NGIIHRDVKPANIMI--SATNAV 155
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE 243
KV DFG+++ I + + V + G+ +Y++PE + D + DV+S +LYE+L
Sbjct: 156 KVMDFGIARAI-ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 244 GEPPLANYEPYEAA-KYVAEGH-RPFFRAKGFTPELRELTEKCWAADMNQR 292
GEPP P A ++V E P R +G + +L + K A + R
Sbjct: 215 GEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 21/255 (8%)
Query: 43 DFSSSAIIGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +G GSFG + +++ G A+K + + ++ E +L + HP
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
I++ G + + + +I +Y+ GG+L L++ A +A ++ + YLH++
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV-YKMTGETGSYRYMAPEV 219
II+RDLKP N+LL + H+K+ DFG +K + DV Y + G Y+APEV
Sbjct: 127 --IIYRDLKPENILLDKNG--HIKITDFGFAKYVP-----DVTYXLCGTPD---YIAPEV 174
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV--AEGHRPFFRAKGFTPEL 277
+ Y+K +D +SF +++YEML G P + + + + AE P F F ++
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF----FNEDV 230
Query: 278 RELTEKCWAADMNQR 292
++L + D++QR
Sbjct: 231 KDLLSRLITRDLSQR 245
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IG+G+ G + A G VAI+++ L L+I +E+ ++ + ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII----NEILVMRENKNPNIVNYL 83
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ L ++ EYL GG L + E + + + + +LH+ N +IHR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS--NQVIHR 140
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+K N+LL + +K+ DFG I + S K + G+ +MAPEV + Y
Sbjct: 141 DIKSDNILLGMDGS--VKLTDFGFCAQITPEQS----KRSXMVGTPYWMAPEVVTRKAYG 194
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCW 285
KVD++S ++ EM+EGEPP N P A +A P + + + R+ +C
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 286 AADMNQRPSFLDILK 300
D+ +R S ++L+
Sbjct: 255 EMDVEKRGSAKELLQ 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+K I+ + +Q EV ++ L HPNIV+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 131
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + GS Y APE+F+ +KYD
Sbjct: 132 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTF-----CGSPPYAAPELFQGKKYD 183
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 239
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 240 FLILNPSKRGTLEQIMK 256
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 17/225 (7%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VAIK I+ + +Q EV ++ L HPNIV+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIK-IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L LI EY GG++ YL G + A + I + Y H + I+HRD
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR--IVHRD 139
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S V D + G+ Y APE+F+ +KYD
Sbjct: 140 LKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAF-----CGAPPYAAPELFQGKKYD 191
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFF 268
+VDV+S +ILY ++ G P E + V G PF+
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 27/278 (9%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKA-YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVK 96
DP+ + F ++G G++G++ K + + +A +++ D+ ++ + E+N+L K
Sbjct: 21 DPAGI-FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKK 76
Query: 97 LRH-PNIVQFLGAVTERKP------LMLITEYLRGGDLHKYLKE-KG-ALSPSTAVNFAL 147
H NI + GA ++ P L L+ E+ G + +K KG L
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR 136
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+I RG+++LH + +IHRD+K +NVLL ++ +K+ DFG+S Q V +
Sbjct: 137 EILRGLSHLHQ--HKVIHRDIKGQNVLLTENA--EVKLVDFGVS----AQLDRTVGRRNT 188
Query: 208 ETGSYRYMAPEVFKHRK-----YDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
G+ +MAPEV + YD K D++S + EM EG PPL + P A +
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 248
Query: 263 GHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
P ++K ++ + + E C + +QRP+ ++K
Sbjct: 249 NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IG+G+ G + A G VAI+++ L L+I +E+ ++ + ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII----NEILVMRENKNPNIVNYL 83
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ L ++ EYL GG L + E + + + + +LH+ N +IHR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS--NQVIHR 140
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+K N+LL + +K+ DFG I + S K + G+ +MAPEV + Y
Sbjct: 141 DIKSDNILLGMDGS--VKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYG 194
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCW 285
KVD++S ++ EM+EGEPP N P A +A P + + + R+ +C
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 286 AADMNQRPSFLDILK 300
D+ +R S ++L+
Sbjct: 255 DMDVEKRGSAKELLQ 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 13 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+ITE+ + G+L YL+ K
Sbjct: 71 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 182
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 183 FGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 241 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 21/257 (8%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+K I+ + +Q EV ++ L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G + A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LK N+LL AD ++K+ DFG S N D + G+ Y APE+F+ +KYD
Sbjct: 139 LKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAF-----CGAPPYAAPELFQGKKYD 190
Query: 227 K-KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRAKGFTPELRELTEK 283
+VDV+S +ILY ++ G P E + V G PF+ + + L +K
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY----MSTDCENLLKK 246
Query: 284 CWAADMNQRPSFLDILK 300
+ ++R + I+K
Sbjct: 247 FLILNPSKRGTLEQIMK 263
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IG+G+ G + A G VAI+++ L L+I +E+ ++ + ++PNIV +L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII----NEILVMRENKNPNIVNYL 83
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ L ++ EYL GG L + E + + + + +LH+ N +IHR
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS--NQVIHR 140
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+K N+LL + +K+ DFG I + S K + G+ +MAPEV + Y
Sbjct: 141 DIKSDNILLGMDGS--VKLTDFGFCAQITPEQS----KRSEMVGTPYWMAPEVVTRKAYG 194
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCW 285
KVD++S ++ EM+EGEPP N P A +A P + + + R+ +C
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 286 AADMNQRPSFLDILK 300
D+ +R S ++L+
Sbjct: 255 DMDVEKRGSAKELLQ 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IG+G+ G + A G VAI+++ L L+I +E+ ++ + ++PNIV +L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII----NEILVMRENKNPNIVNYL 84
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ L ++ EYL GG L + E + + + + +LH+ N +IHR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS--NQVIHR 141
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+K N+LL + +K+ DFG I + S K + G+ +MAPEV + Y
Sbjct: 142 DIKSDNILLGMDGS--VKLTDFGFCAQITPEQS----KRSXMVGTPYWMAPEVVTRKAYG 195
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCW 285
KVD++S ++ EM+EGEPP N P A +A P + + + R+ +C
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 286 AADMNQRPSFLDILK 300
D+ +R S ++++
Sbjct: 256 EMDVEKRGSAKELIQ 270
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 13 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+ITE+ + G+L YL+ K
Sbjct: 71 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 182
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 183 FGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 241 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 13 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+ITE+ + G+L YL+ K
Sbjct: 71 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 182
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 183 FGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 241 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 43/297 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L+ +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 23 WEFPRDRLNLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 80
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 81 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT 136
Query: 135 ------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ DF
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDF 192
Query: 189 GLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPP 247
GL++ + D + ++MAPE R Y + DV+SF ++L+E+ G P
Sbjct: 193 GLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 248 LANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
+ E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 251 YPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVI----QDFRH---EVNLLVKLRHPN 101
++GKG +G++ + + T +I + +I +D H E N+L +++HP
Sbjct: 24 VLGKGGYGKVFQVR-KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
IV + A L LI EYL GG+L L+ +G TA + +I+ + +LH +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG- 141
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK 221
II+RDLKP N++L + H+K+ DFGL K ++ HD G+ YMAPE+
Sbjct: 142 -IIYRDLKPENIML--NHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPLAN 250
+++ VD +S ++Y+ML G PP
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVI----QDFRH---EVNLLVKLRHPN 101
++GKG +G++ + + T +I + +I +D H E N+L +++HP
Sbjct: 24 VLGKGGYGKVFQVR-KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
IV + A L LI EYL GG+L L+ +G TA + +I+ + +LH +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG- 141
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK 221
II+RDLKP N++L + H+K+ DFGL K ++ HD G+ YMAPE+
Sbjct: 142 -IIYRDLKPENIML--NHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPLAN 250
+++ VD +S ++Y+ML G PP
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPS--LSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKGSFG++ A ++ T AIK + L DD + V L +
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWE 77
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + ++ L + EYL GGDL +++ S A +A +I G+ +LH+
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+ I++RDLK N+LL H+K+ DFG+ K +N K G+ Y+APE
Sbjct: 138 KG--IVYRDLKLDNILL--DKDGHIKIADFGMCK----ENMLGDAKTNEFCGTPDYIAPE 189
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ +KY+ VD +SF ++LYEML G+ P
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
D+ IG GS+G K + + + + L S Q EVNLL +L+HPN
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVQFLGAVTERK--PLMLITEYLRGGDL----------HKYLKEKGALSPSTAVNFALDI 149
IV++ + +R L ++ EY GGDL +YL E+ L T + AL
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
+ + + ++HRDLKP NV L ++K+GDFGL++++ +HD
Sbjct: 127 CHRRS---DGGHTVLHRDLKPANVFL--DGKQNVKLGDFGLARIL----NHDEDFAKEFV 177
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPF 267
G+ YM+PE Y++K D++S +LYE+ PP + E A + EG R
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP 237
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+R ++ EL E+ + RPS +IL+
Sbjct: 238 YR---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 146/294 (49%), Gaps = 40/294 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L+ +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 22 WEFPRDRLNLGKP--LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKD 135
Query: 135 ---GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS 191
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL+
Sbjct: 136 LYKDFLTLEHLICYSFQVAKGMEFLASRKX--IHRDLAARNILL--SEKNVVKICDFGLA 191
Query: 192 KLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLAN 250
+ + D + ++MAPE R Y + DV+SF ++L+E+ G P
Sbjct: 192 R--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Query: 251 YE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
+ E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 250 VKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 138/300 (46%), Gaps = 38/300 (12%)
Query: 34 DWEIDPSELDF-----SSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQD 86
D E D E D+ ++GKG++G + + +AIK I D Q
Sbjct: 9 DCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP---ERDSRYSQP 65
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GAL--SPSTAV 143
E+ L L+H NIVQ+LG+ +E + + E + GG L L+ K G L + T
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 125
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSK-LIKVQNSHDV 202
+ I G+ YLH+ N I+HRD+K NV L+N+ + LK+ DFG SK L + +
Sbjct: 126 FYTKQILEGLKYLHD--NQIVHRDIKGDNV-LINTYSGVLKISDFGTSKRLAGINPCTET 182
Query: 203 YKMTGETGSYRYMAPEVFKH--RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
+ TG+ +YMAPE+ R Y K D++S + EM G+PP +AA +
Sbjct: 183 F-----TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
Query: 261 AEGHRPFFRA-----KGFTPELRELTEKCWAADMNQRPSFLDI-----LKRLEKIKETLP 310
F+ + + E + KC+ D ++R D+ LK K K+T P
Sbjct: 238 V----GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 36 EIDPSELD---FSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQD 86
E+DP+ + +G+G FG++ + G VA+K + P + I D
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IAD 69
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTER--KPLMLITEYLRGGDLHKYL-KEKGALSPSTAV 143
+ E+ +L L H NIV++ G TE + LI E+L G L +YL K K ++ +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+A+ I +GM YL + V HRDL RNVL+ S +K+GDFGL+K I+
Sbjct: 130 KYAVQICKGMDYLGSRQYV--HRDLAARNVLV--ESEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 204 KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML----EGEPPLANY----EPYE 255
K ++ + Y APE K+ DV+SF + L+E+L P+A + P
Sbjct: 186 KDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH 244
Query: 256 AAKYVA-------EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
V EG R E+ +L KCW + R SF ++++ E +
Sbjct: 245 GQMTVTRLVNTLKEGKR-LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 11 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 66
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HR+L RN ++ + +K+GDFG+++ I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFT--VKIGDFGMTRDIY- 181
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 182 --ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + N RP+FL+I+ L+
Sbjct: 240 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPS--LSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKGSFG++ A ++ T AIK + L DD + V L +
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-LSLAWE 76
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + ++ L + EYL GGDL +++ S A +A +I G+ +LH+
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+ I++RDLK N+LL H+K+ DFG+ K +N K G+ Y+APE
Sbjct: 137 KG--IVYRDLKLDNILL--DKDGHIKIADFGMCK----ENMLGDAKTNXFCGTPDYIAPE 188
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ +KY+ VD +SF ++LYEML G+ P
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 12 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 67
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HR+L RN ++ + +K+GDFG+++ I
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFT--VKIGDFGMTRDIY- 182
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 183 --ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + N RP+FL+I+ L+
Sbjct: 241 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 146/294 (49%), Gaps = 40/294 (13%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L+ +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 22 WEFPRDRLNLGKP--LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKD 135
Query: 135 ---GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS 191
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL+
Sbjct: 136 LYKDFLTLEHLIXYSFQVAKGMEFLASRKX--IHRDLAARNILL--SEKNVVKIXDFGLA 191
Query: 192 KLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLAN 250
+ + D + ++MAPE R Y + DV+SF ++L+E+ G P
Sbjct: 192 R--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Query: 251 YE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
+ E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 250 VKIDEEFXRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 11 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 66
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HRDL RN ++ + +K+GDFG+++ I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDIX- 181
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D + G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 182 --ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + N RP+FL+I+ L+
Sbjct: 240 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 13 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 71 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 182
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 183 FGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 241 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 22 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 191
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 192 FGLAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 250 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E + ++G G+FG + K W PVAIK + + S ++ E ++
Sbjct: 16 ETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK--ANKEILDEAYVM 73
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGM 153
+ P + + LG + + L+T+ + G L +++E +G L +N+ + IA+GM
Sbjct: 74 AGVGSPYVSRLLG-ICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
+YL E ++HRDL RNVL+ S +H+K+ DFGL++L+ + + Y G +
Sbjct: 133 SYL--EDVRLVHRDLAARNVLV--KSPNHVKITDFGLARLLDIDETE--YHADGGKVPIK 186
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRAKG 272
+MA E R++ + DV+S+ + ++E++ G P E + +G R +
Sbjct: 187 WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER-LPQPPI 245
Query: 273 FTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
T ++ + KCW D RP F +++ ++
Sbjct: 246 CTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 42/296 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 24 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 81
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 82 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKP 137
Query: 135 -----GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFG 189
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ DFG
Sbjct: 138 EDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX--IHRDLAARNILL--SEKNVVKICDFG 193
Query: 190 LSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPL 248
L++ + D + ++MAPE R Y + DV+SF ++L+E+ G P
Sbjct: 194 LAR--DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 249 ANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
+ E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 252 PGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ + G VA+K + P + I D + E+ +L L H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHENIV 74
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G TE + LI E+L G L +YL K K ++ + +A+ I +GM YL +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
V HRDL RNVL+ S +K+GDFGL+K I+ K ++ + Y APE
Sbjct: 135 YV--HRDLAARNVLV--ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANY----EPYEAAKYVA-------EGHR 265
K+ DV+SF + L+E+L P+A + P V EG R
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 249
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKI 305
E+ +L KCW + R SF ++++ E +
Sbjct: 250 -LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 11 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 66
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HRDL RN ++ + +K+GDFG+++ I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDIY- 181
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D Y+ G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 182 --ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + RP+FL+I+ L+
Sbjct: 240 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IG+G+ G + A G VAI+++ L L+I +E+ ++ + ++PNIV +L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII----NEILVMRENKNPNIVNYL 84
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ L ++ EYL GG L + E + + + + +LH+ N +IHR
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS--NQVIHR 141
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
++K N+LL + +K+ DFG I + S K + G+ +MAPEV + Y
Sbjct: 142 NIKSDNILLGMDGS--VKLTDFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYG 195
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCW 285
KVD++S ++ EM+EGEPP N P A +A P + + + R+ +C
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 286 AADMNQRPSFLDILK 300
D+ +R S ++++
Sbjct: 256 EMDVEKRGSAKELIQ 270
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 22 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 191
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 192 FGLAR--DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 250 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 50 IGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG++ K G VA+K + V+ R E+ L RHP+I++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
++ + ++ EY+ GG+L Y+ + G L + I G+ Y H ++++HRD
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR--HMVVHRD 141
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY-D 226
LKP NVLL + + K+ DFGLS ++ D + GS Y APEV R Y
Sbjct: 142 LKPENVLL--DAHMNAKIADFGLSNMMS-----DGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWA 286
+VD++S +ILY +L G P + K + +G F+ + P + L +
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVISLLKHMLQ 252
Query: 287 ADMNQRPSFLDILKRLEKIKETLP 310
D +R + DI + E K+ LP
Sbjct: 253 VDPMKRATIKDI-REHEWFKQDLP 275
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 38 DPSELDFSSSAIIGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQD---FRHEVNL 93
DPS+ F ++G+GSFG++ L G+ + L L ++D + E ++
Sbjct: 22 DPSQ--FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGM 153
LV++ HP IV+ A L LI ++LRGGDL L ++ + + ++A +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
+LH+ II+RDLKP N+LL H+K+ DFGLSK + + Y G+
Sbjct: 140 DHLHSLG--IIYRDLKPENILL--DEEGHIKLTDFGLSKE-SIDHEKKAYSF---CGTVE 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV--AEGHRPFFRAK 271
YMAPEV R + + D +SF ++++EML G P + E + A+ P F +
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 272 GFTPELRELTEKCWAADMNQRPSFLDILKR 301
LR L ++ A + P ++ +KR
Sbjct: 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 22 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 191
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 192 FGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 250 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 32/279 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
D+E D + ++GKG++G + + +AIK I D Q E+
Sbjct: 4 DYEYDEN----GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP---ERDSRYSQPLHEEI 56
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GAL--SPSTAVNFALD 148
L L+H NIVQ+LG+ +E + + E + GG L L+ K G L + T +
Sbjct: 57 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSK-LIKVQNSHDVYKMTG 207
I G+ YLH+ N I+HRD+K NV L+N+ + LK+ DFG SK L + + +
Sbjct: 117 ILEGLKYLHD--NQIVHRDIKGDNV-LINTYSGVLKISDFGTSKRLAGINPCTETF---- 169
Query: 208 ETGSYRYMAPEVFKH--RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
TG+ +YMAPE+ R Y K D++S + EM G+PP +AA +
Sbjct: 170 -TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG--- 225
Query: 266 PFFRA-----KGFTPELRELTEKCWAADMNQRPSFLDIL 299
F+ + + E + KC+ D ++R D+L
Sbjct: 226 -MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 59 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 116
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 117 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 172
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 228
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 229 FGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 287 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 38 DPSELDFSSSAIIGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQD---FRHEVNL 93
DPS+ F ++G+GSFG++ L G+ + L L ++D + E ++
Sbjct: 23 DPSQ--FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGM 153
LV++ HP IV+ A L LI ++LRGGDL L ++ + + ++A +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
+LH+ II+RDLKP N+LL H+K+ DFGLSK + + Y G+
Sbjct: 141 DHLHSLG--IIYRDLKPENILL--DEEGHIKLTDFGLSKE-SIDHEKKAYSF---CGTVE 192
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV--AEGHRPFFRAK 271
YMAPEV R + + D +SF ++++EML G P + E + A+ P F +
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 252
Query: 272 GFTPELRELTEKCWAADMNQRPSFLDILKR 301
LR L ++ A + P ++ +KR
Sbjct: 253 EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 282
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 44/298 (14%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 24 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 81
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK--------- 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 82 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE 137
Query: 135 -------GALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
L+ + ++ +A+GM +L + IHRDL RN+LL S + +K+ D
Sbjct: 138 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICD 193
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEP 246
FGL++ + D + ++MAPE R Y + DV+SF ++L+E+ G
Sbjct: 194 FGLAR--DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 251
Query: 247 PLANYE-PYEAAKYVAEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
P + E + + EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 252 PYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 11 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 66
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HRDL RN ++ + +K+GDFG+++ I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDI-- 180
Query: 197 QNSHDVYKMTGETG--SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEP 253
Y G G R+MAPE K + D++SF ++L+E+ E P
Sbjct: 181 --YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 254 YEAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + RP+FL+I+ L+
Sbjct: 239 EQVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRHEVN 92
W I+ D+ +IG G+ + AY + VAIKRI +L + + + E+
Sbjct: 10 WSINRD--DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI--NLEKCQTSMDELLKEIQ 65
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGG---DLHKYLKEKG-----ALSPSTAVN 144
+ + HPNIV + + + L L+ + L GG D+ K++ KG L ST
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
++ G+ YLH N IHRD+K N+LL + +++ DFG+S + K
Sbjct: 126 ILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDITRNK 181
Query: 205 MTGE-TGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
+ G+ +MAPEV + R YD K D++SF + E+ G P Y P + +
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 241
Query: 263 GHRPFFRA--------KGFTPELRELTEKCWAADMNQRPSFLDILK 300
P K + R++ C D +RP+ ++L+
Sbjct: 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 28/286 (9%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRHEVN 92
W I+ D+ +IG G+ + AY + VAIKRI +L + + + E+
Sbjct: 5 WSINRD--DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI--NLEKCQTSMDELLKEIQ 60
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGG---DLHKYLKEKG-----ALSPSTAVN 144
+ + HPNIV + + + L L+ + L GG D+ K++ KG L ST
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
++ G+ YLH N IHRD+K N+LL + +++ DFG+S + K
Sbjct: 121 ILREVLEGLEYLHK--NGQIHRDVKAGNILLGEDGS--VQIADFGVSAFLATGGDITRNK 176
Query: 205 MTGE-TGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
+ G+ +MAPEV + R YD K D++SF + E+ G P Y P + +
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ 236
Query: 263 GHRPFFRA--------KGFTPELRELTEKCWAADMNQRPSFLDILK 300
P K + R++ C D +RP+ ++L+
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 38 DPSELDFSSSAIIGKGSFGEI-LKAYWRGTPVAIKRILPSLSDDRLVIQD---FRHEVNL 93
DPS+ F ++G+GSFG++ L G+ + L L ++D + E ++
Sbjct: 22 DPSQ--FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGM 153
LV++ HP IV+ A L LI ++LRGGDL L ++ + + ++A +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
+LH+ II+RDLKP N+LL H+K+ DFGLSK + + Y G+
Sbjct: 140 DHLHSLG--IIYRDLKPENILL--DEEGHIKLTDFGLSKE-SIDHEKKAYSF---CGTVE 191
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV--AEGHRPFFRAK 271
YMAPEV R + + D +SF ++++EML G P + E + A+ P F +
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSP 251
Query: 272 GFTPELRELTEKCWAADMNQRPSFLDILKR 301
LR L ++ A + P ++ +KR
Sbjct: 252 EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 125/272 (45%), Gaps = 23/272 (8%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I D ++ + E+ LRHPNIV+F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 81
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ EY GG+L + + G S A F + G++Y H + HRD
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRD 139
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N LL S A LK+ DFG SK + H K T G+ Y+APEV ++YD
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYSKSSVL---HSQPKST--VGTPAYIAPEVLLKKEYDG 194
Query: 228 KV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG------FTPELREL 280
KV DV+S + LY ML G P +P E + HR +PE R L
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 252
Query: 281 TEKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+ + AD +R S +I + E + LP D
Sbjct: 253 ISRIFVADPAKRISIPEI-RNHEWFLKNLPAD 283
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 50 IGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
IG+G++G + KA G A+K+I D+ + R E+++L +L+H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ +K L+L+ E+L DL K L +G L TA +F L + G+AY H+ ++HRD
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRD 125
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYD 226
LKP+N LL+N + LK+ DFGL++ + V K T E + Y AP+V +KY
Sbjct: 126 LKPQN-LLINREGE-LKIADFGLARAFGIP----VRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 227 KKVDVFSFAMILYEMLEGEP 246
+D++S I EM+ G P
Sbjct: 180 TTIDIWSVGCIFAEMVNGTP 199
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 31/274 (11%)
Query: 50 IGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
+G+GSFG + + R T VA+K + S S + +F +E +++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCHHV 81
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALSPSTA--VNFALDIARG 152
V+ LG V++ +P +++ E + GDL YL+ G P+ + A +IA G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE-TGS 211
MAYL+ + +HRDL RN ++ + +K+GDFG+++ I D Y+ G+
Sbjct: 142 MAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDIY---ETDYYRKGGKGLLP 194
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPYEAAKYVAEGHRPFFRA 270
R+MAPE K + D++SF ++L+E+ E P + K+V +G +
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG--YLDQ 252
Query: 271 KGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
PE + +L CW + RP+FL+I+ L+
Sbjct: 253 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKG+F ++ A G VA+K I+ + +Q EV + L HPNIV+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVK-IIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ K L L+ EY GG++ YL G A I + Y H + I+HRD
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK--FIVHRD 138
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N+LL + ++K+ DFG S N D + G+ Y APE+F+ +KYD
Sbjct: 139 LKAENLLL--DADXNIKIADFGFSNEFTFGNKLDAF-----CGAPPYAAPELFQGKKYDG 191
Query: 228 -KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR--PFFRA 270
+VDV+S +ILY ++ G P E + V G PF+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXS 237
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 50 IGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
IG+G++G + KA G A+K+I D+ + R E+++L +L+H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ +K L+L+ E+L DL K L +G L TA +F L + G+AY H+ ++HRD
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRD 125
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYD 226
LKP+N LL+N + LK+ DFGL++ + V K T E + Y AP+V +KY
Sbjct: 126 LKPQN-LLINREGE-LKIADFGLARAFGIP----VRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 227 KKVDVFSFAMILYEMLEGEP 246
+D++S I EM+ G P
Sbjct: 180 TTIDIWSVGCIFAEMVNGAP 199
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 35/281 (12%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S D + +DF+ E+ +L L IV
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 74
Query: 104 QFLGAV--TERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L L+ EYL G L +L + + L S + ++ I +GM YL +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS-- 132
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+HRDL RN+L+ S H+K+ DFGL+KL+ + + V + G++ + Y APE
Sbjct: 133 RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL 189
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAK-----------YVAEGHR 265
+ ++ DV+SF ++LYE+ + P A + ++ + EG R
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQR 249
Query: 266 PFFRAKGFTP-ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
A P E+ EL + CWA RPSF + +L+ +
Sbjct: 250 --LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S D + +DF+ E+ +L L IV
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 87
Query: 104 QFLGAV--TERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L L+ EYL G L +L + + L S + ++ I +GM YL +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS-- 145
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+HRDL RN+L+ S H+K+ DFGL+KL+ + + V + G++ + Y APE
Sbjct: 146 RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL 202
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAK-----------YVAEGHR 265
+ ++ DV+SF ++LYE+ + P A + + + EG R
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR 262
Query: 266 PFFRAKGFTP-ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
A P E+ EL + CWA RPSF + +L+ +
Sbjct: 263 --LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 35/281 (12%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S D + +DF+ E+ +L L IV
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 75
Query: 104 QFLGAV--TERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R+ L L+ EYL G L +L + + L S + ++ I +GM YL +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS-- 133
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+HRDL RN+L+ S H+K+ DFGL+KL+ + + V + G++ + Y APE
Sbjct: 134 RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL 190
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAK-----------YVAEGHR 265
+ ++ DV+SF ++LYE+ + P A + + + EG R
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 250
Query: 266 PFFRAKGFTP-ELRELTEKCWAADMNQRPSFLDILKRLEKI 305
A P E+ EL + CWA RPSF + +L+ +
Sbjct: 251 --LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 50 IGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
IG+G++G + KA G A+K+I D+ + R E+++L +L+H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDV 68
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ +K L+L+ E+L DL K L +G L TA +F L + G+AY H+ ++HRD
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRD 125
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYD 226
LKP+N LL+N + LK+ DFGL++ + V K T E + Y AP+V +KY
Sbjct: 126 LKPQN-LLINREGE-LKIADFGLARAFGIP----VRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 227 KKVDVFSFAMILYEMLEGEP 246
+D++S I EM+ G P
Sbjct: 180 TTIDIWSVGCIFAEMVNGTP 199
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 50 IGKGSFGEILKAY-WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+G+G++G + KA +G VA+KRI D+ + R E++LL +L HPNIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDV 87
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + L L+ E++ DL K L E K L S + + RG+A+ H + I+HRD
Sbjct: 88 IHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ--HRILHRD 144
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYD 226
LKP+N LL+NS LK+ DFGL++ + V T E + Y AP+V +KY
Sbjct: 145 LKPQN-LLINSDG-ALKLADFGLARAFGIP----VRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 227 KKVDVFSFAMILYEMLEGEP 246
VD++S I EM+ G+P
Sbjct: 199 TSVDIWSIGCIFAEMITGKP 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I + + + E+ LRHPNIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYI----ERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ EY GG+L + + G S A F + G++Y H + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRD 140
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N LL S A LK+ DFG SK + H K T G+ Y+APEV ++YD
Sbjct: 141 LKLENTLLDGSPAPRLKICDFGYSKSSVL---HSQPKST--VGTPAYIAPEVLLKKEYDG 195
Query: 228 KV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG------FTPELREL 280
KV DV+S + LY ML G P +P E + HR +PE R L
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 281 TEKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+ + AD +R S +I + E + LP D
Sbjct: 254 ISRIFVADPAKRISIPEI-RNHEWFLKNLPAD 284
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
++ IG+G++G + AY R T VAIK+I P + + Q E+ +L++ RH N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPF--EHQTYCQRTLREIQILLRFRHEN 102
Query: 102 IV---QFLGAVT-ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
++ L A T E + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQ-QLSNDHICYFLYQILRGLKYIH 161
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ ++ H + +T + Y AP
Sbjct: 162 SAN--VLHRDLKPSN-LLINTTCD-LKICDFGLARIADPEHDHTGF-LTEXVATRWYRAP 216
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 50 IGKGSFGEILKAY-WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+G+G++G + KA +G VA+KRI D+ + R E++LL +L HPNIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDV 87
Query: 109 VTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + L L+ E++ DL K L E K L S + + RG+A+ H + I+HRD
Sbjct: 88 IHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ--HRILHRD 144
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYD 226
LKP+N LL+NS LK+ DFGL++ + V T E + Y AP+V +KY
Sbjct: 145 LKPQN-LLINSDG-ALKLADFGLARAFGIP----VRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 227 KKVDVFSFAMILYEMLEGEP 246
VD++S I EM+ G+P
Sbjct: 199 TSVDIWSIGCIFAEMITGKP 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 20/259 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDR--LVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG++ R + ++R++ +++ DR + ++ E+ +L L HPNI++
Sbjct: 30 LGSGAFGDVHLVEERSS--GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 108 AVTERKPLMLITEYLRGGDLHKYL---KEKG-ALSPSTAVNFALDIARGMAYLHNEPNVI 163
+ + ++ E GG+L + + + +G ALS + +AY H++ +
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--V 145
Query: 164 IHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
+H+DLKP N+L ++S +K+ DFGL++L K + H T G+ YMAPEVFK
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHS----TNAAGTALYMAPEVFK- 199
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF--RAKGFTPELREL 280
R K D++S +++Y +L G P E + A P + + TP+ +L
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLPFTG-TSLEEVQQKATYKEPNYAVECRPLTPQAVDL 258
Query: 281 TEKCWAADMNQRPSFLDIL 299
++ D +RPS +L
Sbjct: 259 LKQMLTKDPERRPSAAQVL 277
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 18/206 (8%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVKL-RHPNIVQFL 106
IG GS+ E + + T + A+K I S +D E+ +L++ +HPNI+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHPNIITLK 87
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ K + L+TE +RGG+L + + S A I + + YLH++ ++HR
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHR 145
Query: 167 DLKPRNVLLVNSSA--DHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
DLKP N+L V+ S + L++ DFG +K ++ +N + + ++APEV K +
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENG----LLMTPCYTANFVAPEVLKRQG 201
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLAN 250
YD+ D++S ++LY ML G P AN
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 20/262 (7%)
Query: 49 IIGK-GSFGEILKAYWRGTPV-AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
IIG+ G FG++ KA + T V A +++ + S++ L +D+ E+++L HPNIV+ L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKLL 73
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIH 165
A L ++ E+ GG + + E + L+ S + YLH+ N IIH
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD--NKIIH 131
Query: 166 RDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD-VYKMTGETGSYRYMAPEVF---- 220
RDLK N+L +K+ DFG+S +N+ + + G+ +MAPEV
Sbjct: 132 RDLKAGNILFTLDG--DIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 221 -KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFF-RAKGFTPELR 278
K R YD K DV+S + L EM E EPP P +A+ P + ++ +
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 245
Query: 279 ELTEKCWAADMNQRPSFLDILK 300
+ +KC +++ R + +L+
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQ 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 8 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 63
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HRDL RN ++ + +K+GDFG+++ I
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDIX- 178
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D + G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 179 --ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + RP+FL+I+ L+
Sbjct: 237 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 144/300 (48%), Gaps = 45/300 (15%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D + +GKG +GE+ + W+G VA+K + S D++ ++ E+ V LRH NI
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRE--TELYNTVMLRHENI 64
Query: 103 VQFLGA-VTER---KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
+ F+ + +T R L LIT Y G L+ YL + L + + L IA G+A+LH
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 159 E------PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
E I HRDLK +N+L+ + + D GL+ + + N DV G+
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGN-NPRVGT 180
Query: 212 YRYMAPEVFKHR----KYD--KKVDVFSFAMILYEML----------EGEPPLANYEP-- 253
RYMAPEV +D K+VD+++F ++L+E+ + +PP + P
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240
Query: 254 --YEAAKYV--AEGHRPFFRAKGFT----PELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+E + V + RP + F+ L +L ++CW + + R + L I K L KI
Sbjct: 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 17/211 (8%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 102
Query: 102 IVQF-----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYL 156
I+ + + K + L+T +L G DL+K LK + LS F I RG+ Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYI 160
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
H+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y A
Sbjct: 161 HSAN--VLHRDLKPSN-LLLNTTXD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRA 215
Query: 217 PEVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
PE+ + K Y K +D++S IL EML P
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 140/290 (48%), Gaps = 33/290 (11%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAYWRG-------TPVAIKRILPSLSDDRLVIQD 86
+WE+ ++ +G+GSFG + + R T VA+K + S S + +
Sbjct: 11 EWEVSREKITLLRE--LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--E 66
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--------KGALS 138
F +E +++ ++V+ LG V++ +P +++ E + GDL YL+ G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 139 PSTA--VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKV 196
P+ + A +IA GMAYL+ + +HRDL RN ++ + +K+GDFG+++ I
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFT--VKIGDFGMTRDIX- 181
Query: 197 QNSHDVYKMTGE-TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYEPY 254
D + G+ R+MAPE K + D++SF ++L+E+ E P
Sbjct: 182 --ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 255 EAAKYVAEGHRPFFRAKGFTPE-LRELTEKCWAADMNQRPSFLDILKRLE 303
+ K+V +G + PE + +L CW + RP+FL+I+ L+
Sbjct: 240 QVLKFVMDGG--YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 18/206 (8%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVKL-RHPNIVQFL 106
IG GS+ E + + T + A+K I S +D E+ +L++ +HPNI+
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHPNIITLK 87
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ K + L+TE +RGG+L + + S A I + + YLH++ ++HR
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG--VVHR 145
Query: 167 DLKPRNVLLVNSSA--DHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
DLKP N+L V+ S + L++ DFG +K ++ +N + + ++APEV K +
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENG----LLMTPCYTANFVAPEVLKRQG 201
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLAN 250
YD+ D++S ++LY ML G P AN
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 45/294 (15%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+GKG +GE+ + W+G VA+K + S D++ ++ E+ V LRH NI+ F+ +
Sbjct: 44 CVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRE--TELYNTVMLRHENILGFIAS 99
Query: 109 -VTER---KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE----- 159
+T R L LIT Y G L+ YL + L + + L IA G+A+LH E
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 160 -PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ + + N DV G+ RYMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGN-NPRVGTKRYMAP 215
Query: 218 EVFKHR----KYD--KKVDVFSFAMILYEML----------EGEPPLANYEP----YEAA 257
EV +D K+VD+++F ++L+E+ + +PP + P +E
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 275
Query: 258 KYV--AEGHRPFFRAKGFT----PELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+ V + RP + F+ L +L ++CW + + R + L I K L KI
Sbjct: 276 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I D ++ + E+ LRHPNIV+F
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ EY GG+L + + G S A F + G++Y H + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ--VAHRD 140
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N LL S A LK+ DFG SK + + + G+ Y+APEV ++YD
Sbjct: 141 LKLENTLLDGSPAPRLKIADFGYSKASVLHS-----QPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 228 KV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG------FTPELREL 280
KV DV+S + LY ML G P + P E + HR +PE R L
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 281 TEKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+ + AD +R S +I + E + LP D
Sbjct: 254 ISRIFVADPAKRISIPEI-RNHEWFLKNLPAD 284
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEI-LKAY-----WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ L Y G VA+K + ++ E+++L L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEHII 79
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
++ G ++ K L L+ EY+ G L YL + ++ + + FA I GMAYLH++
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHSQH- 137
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM--TGETGSYRYMAPEV 219
IHR+L RNVLL N +K+GDFGL+K V H+ Y++ G++ + Y APE
Sbjct: 138 -YIHRNLAARNVLLDNDRL--VKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 220 FKHRKYDKKVDVFSFAMILYEML-----EGEPPLANYEPYEAAK----------YVAEGH 264
K K+ DV+SF + LYE+L PP E A+ + G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
R R E+ L + CW + + RP+F +++ L+ + E
Sbjct: 252 R-LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 45/294 (15%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+GKG +GE+ + W+G VA+K + S D++ ++ E+ V LRH NI+ F+ +
Sbjct: 15 CVGKGRYGEVWRGSWQGENVAVK--IFSSRDEKSWFRE--TELYNTVMLRHENILGFIAS 70
Query: 109 -VTER---KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE----- 159
+T R L LIT Y G L+ YL + L + + L IA G+A+LH E
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 160 -PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ + + N DV G+ RYMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNG--QCCIADLGLAVMHSQSTNQLDVGN-NPRVGTKRYMAP 186
Query: 218 EVFKHR----KYD--KKVDVFSFAMILYEML----------EGEPPLANYEP----YEAA 257
EV +D K+VD+++F ++L+E+ + +PP + P +E
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 258 KYV--AEGHRPFFRAKGFT----PELRELTEKCWAADMNQRPSFLDILKRLEKI 305
+ V + RP + F+ L +L ++CW + + R + L I K L KI
Sbjct: 247 RKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 35/271 (12%)
Query: 50 IGKGSFGEILKAYW------RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+GKG+FG + + G VA+K++ S D + +DF+ E+ +L L IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQILKALHSDFIV 71
Query: 104 QFLGAV--TERKPLMLITEYLRGGDLHKYL-KEKGALSPSTAVNFALDIARGMAYLHNEP 160
++ G R L L+ EYL G L +L + + L S + ++ I +GM YL +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS-- 129
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+HRDL RN+L+ S H+K+ DFGL+KL+ + V + G++ + Y APE
Sbjct: 130 RRCVHRDLAARNILV--ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESL 186
Query: 221 KHRKYDKKVDVFSFAMILYEML----EGEPPLANYEPYEAAK-----------YVAEGHR 265
+ ++ DV+SF ++LYE+ + P A + + + EG R
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 246
Query: 266 PFFRAKGFTP-ELRELTEKCWAADMNQRPSF 295
A P E+ EL + CWA RPSF
Sbjct: 247 --LPAPPACPAEVHELMKLCWAPSPQDRPSF 275
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFR---HEVNLLVKLRHPNIVQFL 106
+GKG+F + + + T + + ++ +L +DF+ E + KL+HPNIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
++ E L+ + + GG+L + + + S + A + I +AY H+ N I+HR
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS--NGIVHR 129
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
+LKP N+LL + + +K+ DFGL+ I+V +S + G G Y++PEV K Y
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG---YLSPEVLKKDPY 184
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPFFRAKGFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + G P TPE + L +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + LK
Sbjct: 245 MLTVNPKKRITADQALK 261
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFR---HEVNLLVKLRHPNIVQFL 106
+GKG+F + + + T + + ++ +L +DF+ E + KL+HPNIV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
++ E L+ + + GG+L + + + S + A + I +AY H+ N I+HR
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS--NGIVHR 129
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
+LKP N+LL + + +K+ DFGL+ I+V +S + G G Y++PEV K Y
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG---YLSPEVLKKDPY 184
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPFFRAKGFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + G P TPE + L +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 244
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + LK
Sbjct: 245 MLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFR---HEVNLLVKLRHPNIVQFL 106
+GKG+F + + + T + + ++ +L +DF+ E + KL+HPNIV+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
++ E L+ + + GG+L + + + S + A + I +AY H+ N I+HR
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS--NGIVHR 128
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
+LKP N+LL + + +K+ DFGL+ I+V +S + G G Y++PEV K Y
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG---YLSPEVLKKDPY 183
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPFFRAKGFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + G P TPE + L +
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 243
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + LK
Sbjct: 244 MLTVNPKKRITADQALK 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFR---HEVNLLVKLRHPNIVQFL 106
+GKG+F + + + T + + ++ +L +DF+ E + KL+HPNIV+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
++ E L+ + + GG+L + + + S + A + I +AY H+ N I+HR
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS--NGIVHR 152
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
+LKP N+LL + + +K+ DFGL+ I+V +S + G G Y++PEV K Y
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG---YLSPEVLKKDPY 207
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG--HRPFFRAKGFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + G P TPE + L +
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDS 267
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + LK
Sbjct: 268 MLTVNPKKRITADQALK 284
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 126/280 (45%), Gaps = 25/280 (8%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVK 96
ID +L+F + + + GE+ K W+G + +K +L +DF E L
Sbjct: 7 IDFKQLNFLTK--LNENHSGELWKGRWQGNDIVVK-VLKVRDWSTRKSRDFNEECPRLRI 63
Query: 97 LRHPNIVQFLGAVTERKPL---MLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
HPN++ LGA + P LIT + G L+ L E + S AV FALD AR
Sbjct: 64 FSHPNVLPVLGAC-QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXAR 122
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
G A+LH +I L R+V + + D S ++ G +
Sbjct: 123 GXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFS-----------FQSPGRXYA 171
Query: 212 YRYMAPEVFKHRKYD---KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVA-EGHRPF 267
++APE + + D + D +SFA++L+E++ E P A+ E VA EG RP
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPT 231
Query: 268 FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
G +P + +L + C D +RP F I+ LEK ++
Sbjct: 232 I-PPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F IG GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GGD+ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ ++KV DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIKVADFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F IG GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GGD+ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ ++KV DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIKVADFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEI-LKAY-----WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ L Y G VA+K + ++ E+++L L H +I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEHII 79
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
++ G ++ K L L+ EY+ G L YL + ++ + + FA I GMAYLH +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQH- 137
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM--TGETGSYRYMAPEV 219
IHR+L RNVLL N +K+GDFGL+K V H+ Y++ G++ + Y APE
Sbjct: 138 -YIHRNLAARNVLLDNDRL--VKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 220 FKHRKYDKKVDVFSFAMILYEML-----EGEPPLANYEPYEAAK----------YVAEGH 264
K K+ DV+SF + LYE+L PP E A+ + G
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 251
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
R R E+ L + CW + + RP+F +++ L+ + E
Sbjct: 252 R-LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GS+G + KA + G VAIK++ P SD +Q+ E++++ + P++V++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-PVESD----LQEIIKEISIMQQCDSPHVVKYYG 91
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKG-ALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ + L ++ EY G + ++ + L+ +G+ YLH IHR
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--IHR 149
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+K N+LL ++ H K+ DFG++ Q + + K G+ +MAPEV + Y+
Sbjct: 150 DIKAGNILL--NTEGHAKLADFGVAG----QLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRA-KGFTPELRELTEKCW 285
D++S + EM EG+PP A+ P A + P FR + ++ + ++C
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
Query: 286 AADMNQRPSFLDILK 300
QR + +L+
Sbjct: 264 VKSPEQRATATQLLQ 278
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 49 IIGKGSFGEILKAYWRGT----PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+IGKG+F + + R T V I + S L +D + E ++ L+HP+IV+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKG----ALSPSTAVNFALDIARGMAYLHNEP 160
L + L ++ E++ G DL + ++ S + A ++ I + Y H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 161 NVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
N IIHRD+KP NVLL + ++ +K+GDFG++ +Q G G+ +MAPEV
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVA----IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
K Y K VDV+ +IL+ +L G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + +A+K + S + V R E+ + LRHP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ +RK + L+ E+ G+L+K L++ G + F ++A + Y H
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-- 133
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+L+ LK+ DFG S + G+ Y+ PE+
Sbjct: 134 RKVIHRDIKPENLLM--GYKGELKIADFGWSVHAPSLRRRXM------CGTLDYLPPEMI 185
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + +D+KVD++ ++ YE L G PP
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + +A+K + S + V R E+ + LRHP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ +RK + L+ E+ G+L+K L++ G + F ++A + Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-- 132
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+L+ LK+ DFG S + G+ Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLM--GYKGELKIADFGWSVHAPSLRRRXM------CGTLDYLPPEMI 184
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + +D+KVD++ ++ YE L G PP
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 84
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 145 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANSFVGTAQYV 198
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 256
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 257 KARDLVEKLLVLDATKR 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 49 IIGKGSFGEI--LKAYWRGTPVAIKRI--LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
++G G+F E+ +K G A+K I P+ D L +E+ +L K++H NIV
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL-----ENEIAVLKKIKHENIVT 70
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
L+ + + GG+L + E+G + A + + YLH N I+
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE--NGIV 128
Query: 165 HRDLKPRNVL-LVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
HRDLKP N+L L + + DFGLSK+ QN M+ G+ Y+APEV +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNG----IMSTACGTPGYVAPEVLAQK 182
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKY--VAEGHRPF 267
Y K VD +S +I Y +L G PP YE E+ + + EG+ F
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPF--YEETESKLFEKIKEGYYEF 226
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 85
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 146 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANAFVGTAQYV 199
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 257
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 258 KARDLVEKLLVLDATKR 274
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 124/272 (45%), Gaps = 23/272 (8%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I D ++ + E+ LRHPNIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ EY GG+L + + G S A F + G++Y H + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRD 140
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N LL S A LK+ FG SK + H K T G+ Y+APEV ++YD
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSKSSVL---HSQPKST--VGTPAYIAPEVLLKKEYDG 195
Query: 228 KV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG------FTPELREL 280
KV DV+S + LY ML G P + P E + HR +PE R L
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHL 253
Query: 281 TEKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
+ + AD +R S +I + E + LP D
Sbjct: 254 ISRIFVADPAKRISIPEI-RNHEWFLKNLPAD 284
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 25/273 (9%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I D ++ + E+ LRHPNIV+F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRFKE 82
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ EY GG+L + + G S A F + G++Y H + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRD 140
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET-GSYRYMAPEVFKHRKYD 226
LK N LL S A LK+ FG SK S ++ +T G+ Y+APEV ++YD
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSK------SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 227 KKV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKG------FTPELRE 279
KV DV+S + LY ML G P +P E + HR +PE R
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 280 LTEKCWAADMNQRPSFLDILKRLEKIKETLPTD 312
L + + AD +R S +I + E + LP D
Sbjct: 253 LISRIFVADPAKRISIPEI-RNHEWFLKNLPAD 284
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + +A+K + S + V R E+ + LRHP
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ +RK + L+ E+ G+L+K L++ G + F ++A + Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE-- 132
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+L+ LK+ DFG S + G+ Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLM--GYKGELKIADFGWSVHAPSLRRRXM------CGTLDYLPPEMI 184
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + +D+KVD++ ++ YE L G PP
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 84
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 145 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 198
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 256
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 257 KARDLVEKLLVLDATKR 273
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 88
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 149 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANSFVGTAQYV 202
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 260
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 261 KARDLVEKLLVLDATKR 277
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 69
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 70 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 130 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 183
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 241
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 242 KARDLVEKLLVLDATKR 258
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 17/218 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQD--FRHEVN 92
E+ + +FS+ I+G+G FG++ K GT VA+KR L ++R + F+ EV
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR----LKEERXQGGELQFQTEVE 87
Query: 93 LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS----TAVNFALD 148
++ H N+++ G +L+ Y+ G + L+E+ P AL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 149 IARGMAYLHNEPN-VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
ARG+AYLH+ + IIHRD+K N+LL VGDFGL+KL+ ++ H + G
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGE 245
G ++APE K +K DVF + ++L E++ G+
Sbjct: 206 TIG---HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
+DF +IG G FG++ KA R G IKR+ + + EV L KL H
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKLDH 63
Query: 100 PNIVQFLG----------------AVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPST 141
NIV + G + ++ K L + E+ G L ++++++ L
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A+ I +G+ Y+H++ +I+RDLKP N+ LV++ +K+GDFGL +K
Sbjct: 124 ALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDG--- 176
Query: 202 VYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVA 261
K G+ RYM+PE + Y K+VD+++ +IL E+L +E +K+
Sbjct: 177 --KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-----VCDTAFETSKFFT 229
Query: 262 EGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+ R + F + + L +K + RP+ +IL+ L
Sbjct: 230 D-LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 134/283 (47%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEI-LKAY-----WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ L Y G VA+K + ++ E+++L L H +I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHEHII 96
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
++ G + L L+ EY+ G L YL + ++ + + FA I GMAYLH +
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQH- 154
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM--TGETGSYRYMAPEV 219
IHRDL RNVLL N +K+GDFGL+K V H+ Y++ G++ + Y APE
Sbjct: 155 -YIHRDLAARNVLLDNDRL--VKIGDFGLAK--AVPEGHEXYRVREDGDSPVFWY-APEC 208
Query: 220 FKHRKYDKKVDVFSFAMILYEML-----EGEPPLANYEPYEAAK----------YVAEGH 264
K K+ DV+SF + LYE+L PP E A+ + G
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
R R E+ L + CW + + RP+F +++ L+ + E
Sbjct: 269 R-LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 33 CDWE-----IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQ-- 85
C W+ I + DFS IIG+G FGE+ R + L R+ ++
Sbjct: 175 CQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGC--RKADTGKMYAMKCLDKKRIKMKQG 232
Query: 86 -----DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
+ R ++L+ P IV A L I + + GGDLH +L + G S +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+A +I G+ ++HN +++RDLKP N+LL H+++ D GL+ + H
Sbjct: 293 DMRFYAAEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPH 348
Query: 201 DVYKMTGETGSYRYMAPEVF-KHRKYDKKVDVFSFAMILYEMLEGEPPLANY---EPYEA 256
G++ YMAPEV K YD D FS +L+++L G P + + +E
Sbjct: 349 ------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
Query: 257 AKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
+ F+PELR L E D+N+R
Sbjct: 403 DRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 33 CDWE-----IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQ-- 85
C W+ I + DFS IIG+G FGE+ R + L R+ ++
Sbjct: 175 CQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGC--RKADTGKMYAMKCLDKKRIKMKQG 232
Query: 86 -----DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
+ R ++L+ P IV A L I + + GGDLH +L + G S +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+A +I G+ ++HN +++RDLKP N+LL H+++ D GL+ + H
Sbjct: 293 DMRFYAAEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPH 348
Query: 201 DVYKMTGETGSYRYMAPEVF-KHRKYDKKVDVFSFAMILYEMLEGEPPLANY---EPYEA 256
G++ YMAPEV K YD D FS +L+++L G P + + +E
Sbjct: 349 ------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
Query: 257 AKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
+ F+PELR L E D+N+R
Sbjct: 403 DRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 120/259 (46%), Gaps = 24/259 (9%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+FG +++ VA+K I + D ++ + E+ LRHPNIV+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKE 83
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L +I EY GG+L++ + G S A F + G++Y H+ I HRD
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRD 141
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
LK N LL S A LK+ DFG SK + H K T G+ Y+APEV ++YD
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVL---HSQPKST--VGTPAYIAPEVLLRQEYDG 196
Query: 228 KV-DVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAK-------GFTPELRE 279
K+ DV+S + LY ML G P + P E Y R K +PE
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFED--PEEPRDYRKTIQR-ILSVKYSIPDDIRISPECCH 253
Query: 280 LTEKCWAADMNQRPSFLDI 298
L + + AD R S +I
Sbjct: 254 LISRIFVADPATRISIPEI 272
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 62
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 123 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 176
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 234
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 235 KARDLVEKLLVLDATKR 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 63
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 124 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 177
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 235
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 236 KARDLVEKLLVLDATKR 252
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 92
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 93 RLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 153 LHGKG--IIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 206
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 264
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 265 KARDLVEKLLVLDATKR 281
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 259
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 260 KARDLVEKLLVLDATKR 276
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 90
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 91 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 151 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 204
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F A F P
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA--FFP 262
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 263 KARDLVEKLLVLDATKR 279
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 33 CDWE-----IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQ-- 85
C W+ I + DFS IIG+G FGE+ R + L R+ ++
Sbjct: 175 CQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGC--RKADTGKMYAMKCLDKKRIKMKQG 232
Query: 86 -----DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
+ R ++L+ P IV A L I + + GGDLH +L + G S +
Sbjct: 233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+A +I G+ ++HN +++RDLKP N+LL H+++ D GL+ + H
Sbjct: 293 DMRFYAAEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPH 348
Query: 201 DVYKMTGETGSYRYMAPEVF-KHRKYDKKVDVFSFAMILYEMLEGEPPLANY---EPYEA 256
G++ YMAPEV K YD D FS +L+++L G P + + +E
Sbjct: 349 ------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
Query: 257 AKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
+ F+PELR L E D+N+R
Sbjct: 403 DRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 33 CDWE-----IDPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQ-- 85
C W+ I + DFS IIG+G FGE+ R + L R+ ++
Sbjct: 174 CQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGC--RKADTGKMYAMKCLDKKRIKMKQG 231
Query: 86 -----DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
+ R ++L+ P IV A L I + + GGDLH +L + G S +
Sbjct: 232 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 291
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+A +I G+ ++HN +++RDLKP N+LL H+++ D GL+ + H
Sbjct: 292 DMRFYAAEIILGLEHMHN--RFVVYRDLKPANILL--DEHGHVRISDLGLACDFSKKKPH 347
Query: 201 DVYKMTGETGSYRYMAPEVF-KHRKYDKKVDVFSFAMILYEMLEGEPPLANY---EPYEA 256
G++ YMAPEV K YD D FS +L+++L G P + + +E
Sbjct: 348 ------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
Query: 257 AKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
+ F+PELR L E D+N+R
Sbjct: 402 DRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRR 435
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 64
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 125 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 178
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 236
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 237 KARDLVEKLLVLDATKR 253
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 85
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 146 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 199
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 257
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 258 KARDLVEKLLVLDATKR 274
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 85
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 146 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 199
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 257
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 258 KARDLVEKLLVLDATKR 274
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 259
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 260 KARDLVEKLLVLDATKR 276
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 88
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 149 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 202
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 260
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 261 KARDLVEKLLVLDATKR 277
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 259
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 260 KARDLVEKLLVLDATKR 276
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 123
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 124 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 179
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 65
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 126 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 179
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 237
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 238 KARDLVEKLLVLDATKR 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS+GE+ A +GT + A K+I +D + F+ E+ ++ L HPNI++
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + L+ E GG+L + + K S A D+ +AY H + HRD
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN--VAHRD 148
Query: 168 LKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LKP N L + S D LK+ DFGL+ K M + G+ Y++P+V + Y
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-----MMRTKVGTPYYVSPQVLEGL-YG 202
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWA 286
+ D +S +++Y +L G PP + E + EG F EK W
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF-------------PEKDW- 248
Query: 287 ADMNQRPSFLDILKRL------EKIKETLPTDHHW 315
+N P +++RL ++I +H W
Sbjct: 249 --LNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANSFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 259
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 260 KARDLVEKLLVLDATKR 276
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS+GE+ A +GT + A K+I +D + F+ E+ ++ L HPNI++
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + L+ E GG+L + + K S A D+ +AY H + HRD
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN--VAHRD 131
Query: 168 LKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LKP N L + S D LK+ DFGL+ K M + G+ Y++P+V + Y
Sbjct: 132 LKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-----MRTKVGTPYYVSPQVLEGL-YG 185
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWA 286
+ D +S +++Y +L G PP + E + EG F EK W
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF-------------PEKDW- 231
Query: 287 ADMNQRPSFLDILKRL------EKIKETLPTDHHW 315
+N P +++RL ++I +H W
Sbjct: 232 --LNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 49 IIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
++G G+F E++ A + T VAIK I + + +E+ +L K++HPNIV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALD 82
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
L LI + + GG+L + EKG + A + + YLH+ I+HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--IVHR 140
Query: 167 DLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+L + D + + DFGLSK+ ++ V ++ G+ Y+APEV + Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV--LSTACGTPGYVAPEVLAQKPY 195
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
K VD +S +I Y +L G PP
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 24/267 (8%)
Query: 50 IGKGSFGE--ILKAYWRGTPVAIKRILPSL--SDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
IG+GSFG+ ++K+ G IK I S S +R ++ R EV +L ++HPNIVQ+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER---EESRREVAVLANMKHPNIVQY 88
Query: 106 LGAVTERKPLMLITEYLRGGDLHKYLK-EKGAL-SPSTAVNFALDIARGMAYLHNEPNVI 163
+ E L ++ +Y GGDL K + +KG L +++ + I + ++H+ I
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--I 146
Query: 164 IHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
+HRD+K +N+ L +++GDFG+++++ + V G+ Y++PE+ +++
Sbjct: 147 LHRDIKSQNIFLTKDGT--VQLGDFGIARVL----NSTVELARACIGTPYYLSPEICENK 200
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEK 283
Y+ K D+++ +LYE+ + + G P ++ +LR L +
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH-YSYDLRSLVSQ 259
Query: 284 CWAADMNQRPSFLDIL------KRLEK 304
+ + RPS IL KR+EK
Sbjct: 260 LFKRNPRDRPSVNSILEKGFIAKRIEK 286
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 49 IIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
++G G+F E++ A + T VAIK I + + +E+ +L K++HPNIV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALD 82
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
L LI + + GG+L + EKG + A + + YLH+ I+HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--IVHR 140
Query: 167 DLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+L + D + + DFGLSK+ ++ V ++ G+ Y+APEV + Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV--LSTACGTPGYVAPEVLAQKPY 195
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
K VD +S +I Y +L G PP
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 80
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 139
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 140 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 194
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F IG GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ ++KV DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIKVADFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 80
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 139
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 140 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 194
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 49 IIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
++G G+F E++ A + T VAIK I + + +E+ +L K++HPNIV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPNIVALD 82
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
L LI + + GG+L + EKG + A + + YLH+ I+HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--IVHR 140
Query: 167 DLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+L + D + + DFGLSK+ ++ V ++ G+ Y+APEV + Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV--LSTACGTPGYVAPEVLAQKPY 195
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
K VD +S +I Y +L G PP
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 87
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 146
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 147 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 201
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 88
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 147
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 148 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 202
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 79
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 138
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 139 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 193
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMXGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMXGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMXGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 126 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMXGTLPYVAPELLKR 181
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 55/294 (18%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
+DF +IG G FG++ KA R G I+R+ + + EV L KL H
Sbjct: 12 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKLDH 64
Query: 100 PNIVQFLG-----------------------------AVTERKPLMLITEYLRGGDLHKY 130
NIV + G + ++ K L + E+ G L ++
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 131 LKEKGA--LSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDF 188
++++ L A+ I +G+ Y+H++ +IHRDLKP N+ LV++ +K+GDF
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSNIFLVDTK--QVKIGDF 180
Query: 189 GLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
GL +K K T G+ RYM+PE + Y K+VD+++ +IL E+L
Sbjct: 181 GLVTSLKNDG-----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH----- 230
Query: 249 ANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRL 302
+E +K+ + R + F + + L +K + RP+ +IL+ L
Sbjct: 231 VCDTAFETSKFFTD-LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 43 DFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF ++GKGSF + +A G VAIK I ++Q ++EV + +L+HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK-GALSPSTAVNFALDIARGMAYLHNE 159
+I++ + + L+ E G++++YLK + S + A +F I GM YLH+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I+HRDL N+LL + ++K+ DFGL+ +K+ + K G+ Y++PE+
Sbjct: 132 G--ILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHE----KHYTLCGTPNYISPEI 183
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + DV+S + Y +L G PP
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 49 IIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
++G G+F E++ A + T VAIK I + + +E+ +L K++HPNIV
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPNIVALD 82
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
L LI + + GG+L + EKG + A + + YLH+ I+HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG--IVHR 140
Query: 167 DLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+L + D + + DFGLSK+ ++ V ++ G+ Y+APEV + Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV--LSTACGTPGYVAPEVLAQKPY 195
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
K VD +S +I Y +L G PP
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G++GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMXGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 82
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 142 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 196
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 84
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 144 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 198
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP EP + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 90
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 149
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 150 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 204
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 82
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 141
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 142 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 196
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GSFG++ A Y VA+K I L + E++ L LRHP+I++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+T ++++ EY GG+L Y+ EK ++ F I + Y H I+HRD
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK--IVHRD 133
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY-D 226
LKP N+LL ++ ++K+ DFGLS ++ N + GS Y APEV + Y
Sbjct: 134 LKPENLLLDDNL--NVKIADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVINGKLYAG 186
Query: 227 KKVDVFSFAMILYEMLEGEPPLAN------YEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+VDV+S ++LY ML G P + ++ + YV P F +P + L
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDF----LSPGAQSL 238
Query: 281 TEKCWAADMNQRPSFLDI 298
+ AD QR + +I
Sbjct: 239 IRRMIVADPMQRITIQEI 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 125/257 (48%), Gaps = 20/257 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF + A T AIK + + R +I++ + E +++
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 85
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 146 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 199
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+PE+ + K D+++ I+Y+++ G PP Y + + + F + F P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF--PEKFFP 257
Query: 276 ELRELTEKCWAADMNQR 292
+ R+L EK D +R
Sbjct: 258 KARDLVEKLLVLDATKR 274
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 11/251 (4%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 128
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE-TGSYRYMAPEVFK 221
I+HRD+KP N+ LVNS + +K+ DFG+S + + +M E G+ YM+PE +
Sbjct: 129 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQL-------IDEMANEFVGTRSYMSPERLQ 179
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELT 281
Y + D++S + L EM G P +E Y+ P + F+ E ++
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 282 EKCWAADMNQR 292
KC + +R
Sbjct: 240 NKCLIKNPAER 250
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 102
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 161
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 162 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 216
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLL 94
++DP+E+ + +G G+FG++ KA + T +A +++ + S++ L +D+ E+ +L
Sbjct: 6 DLDPNEV-WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEIL 62
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
HP IV+ LGA L ++ E+ GG + + E +G P V +
Sbjct: 63 ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEA 121
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
+ +LH++ IIHRDLK NVL+ + +++ DFG+S +N + K G+
Sbjct: 122 LNFLHSKR--IIHRDLKAGNVLM--TLEGDIRLADFGVS----AKNLKTLQKRDSFIGTP 173
Query: 213 RYMAPEV-----FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRP- 266
+MAPEV K YD K D++S + L EM + EPP P +A+ P
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 233
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
++ E R+ + + RPS +L+
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 267
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTXD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSLSDDRLVIQDFRHEVNLL 94
++DP+E+ + +G G+FG++ KA + T +A +++ + S++ L +D+ E+ +L
Sbjct: 14 DLDPNEV-WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEIL 70
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKE--KGALSPSTAVNFALDIARG 152
HP IV+ LGA L ++ E+ GG + + E +G P V +
Sbjct: 71 ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEA 129
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSY 212
+ +LH++ IIHRDLK NVL+ + +++ DFG+S +N + K G+
Sbjct: 130 LNFLHSKR--IIHRDLKAGNVLM--TLEGDIRLADFGVS----AKNLKTLQKRDSFIGTP 181
Query: 213 RYMAPEV-----FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRP- 266
+MAPEV K YD K D++S + L EM + EPP P +A+ P
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 241
Query: 267 FFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
++ E R+ + + RPS +L+
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAAKYVA-EGHRPFFRAKGF 273
+PE+ + K D+++ I+Y+++ G PP A E AK + E P + F
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKF 257
Query: 274 TPELRELTEKCWAADMNQR 292
P+ R+L EK D +R
Sbjct: 258 FPKARDLVEKLLVLDATKR 276
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAI++I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPF--EHQTYCQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 45/297 (15%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRH-EVNLLVKLRHPNIVQFLG 107
+GKG +GE+ + W G VA+K I S + FR E+ V LRH NI+ F+
Sbjct: 15 CVGKGRYGEVWRGLWHGESVAVK-IFSSRDEQSW----FRETEIYNTVLLRHDNILGFIA 69
Query: 108 A-VTERKP---LMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE---- 159
+ +T R L LIT Y G L+ +L+ + L P A+ A+ A G+A+LH E
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ-TLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 160 --PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD K RNVL+ S + D GL+ + + + G+ RYMAP
Sbjct: 129 QGKPAIAHRDFKSRNVLV--KSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 218 EVFKHR-KYD-----KKVDVFSFAMILYEML----------EGEPPLANYEP----YEAA 257
EV + + D K D+++F ++L+E+ + PP + P +E
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDM 246
Query: 258 KYV--AEGHRPF----FRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKET 308
K V + P A L ++ +CW + + R + L I K L+KI +
Sbjct: 247 KKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFR-----HEVNLLV 95
DF I+G+GSF ++ A T AIK + + R +I++ + E +++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIK-----ILEKRHIIKENKVPYVTRERDVMS 87
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+L HP V+ + + L Y + G+L KY+++ G+ + + +I + Y
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + IIHRDLKP N+LL + H+++ DFG +K++ ++ + G+ +Y+
Sbjct: 148 LHGKG--IIHRDLKPENILL--NEDMHIQITDFGTAKVLSPESKQA--RANXFVGTAQYV 201
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAAKYVA-EGHRPFFRAKGF 273
+PE+ + K D+++ I+Y+++ G PP A E AK + E P + F
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKF 257
Query: 274 TPELRELTEKCWAADMNQR 292
P+ R+L EK D +R
Sbjct: 258 FPKARDLVEKLLVLDATKR 276
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 82
Query: 102 IV---QFLGAVT-ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ + A T E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 142 SAN--VLHRDLKPSN-LLLNTTXD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 196
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 82
Query: 102 IV---QFLGAVT-ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ + A T E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 142 SAN--VLHRDLKPSN-LLLNTTXD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 196
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
D+ +G+G+ GE+ A R T A+ + + ++ + E+ + L H N+
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V+F G E L EY GG+L ++ + A F + G+ YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG-- 124
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
I HRD+KP N+LL D+LK+ DFGL+ + + N + + G+ Y+APE+ K
Sbjct: 125 ITHRDIKPENLLL--DERDNLKISDFGLATVFRYNNRERL--LNKMCGTLPYVAPELLKR 180
Query: 223 RKYDKK-VDVFSFAMILYEMLEGEPP 247
R++ + VDV+S ++L ML GE P
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYXQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTXD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L+ RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLAFRHEN 84
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 144 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 198
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 31 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 86
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 87 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 146
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVK--------- 193
Query: 205 MTGET----GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
G T G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + +
Sbjct: 194 --GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
G F F+ +L++L D+ +R
Sbjct: 252 VSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVK--------- 192
Query: 205 MTGET----GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
G T G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + +
Sbjct: 193 --GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
G F F+ +L++L D+ +R
Sbjct: 251 VSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V +++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFGL+K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGLAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 17 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 72
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 73 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 132
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 133 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DEQGYIQVTDFGFAKRVKG-------R 181
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 241
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 242 VRF--PSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L+ RH N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLAFRHEN 84
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 143
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N+++D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 144 SAN--VLHRDLKPSN-LLLNTTSD-LKICDFGLARVADPDHDHTGF-LTEYVATRWYRAP 198
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 82
Query: 102 IV---QFLGAVT-ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ + A T E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + +T + Y AP
Sbjct: 142 SAN--VLHRDLKPSN-LLLNTTXD-LKIXDFGLARVADPDHDHTGF-LTEYVATRWYRAP 196
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 86
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 145
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + + + Y AP
Sbjct: 146 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LXEXVATRWYRAP 200
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+++ + IG+G++G + AY VAIK+I P + + Q E+ +L++ RH N
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHEN 87
Query: 102 IVQF----LGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
I+ E+ + I + L DL+K LK + LS F I RG+ Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIH 146
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ ++HRDLKP N LL+N++ D LK+ DFGL+++ + H + + + Y AP
Sbjct: 147 SAN--VLHRDLKPSN-LLLNTTCD-LKICDFGLARVADPDHDHTGF-LXEXVATRWYRAP 201
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEMLEGEP 246
E+ + K Y K +D++S IL EML P
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 106
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 166
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVK--------- 213
Query: 205 MTGET----GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
G T G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + +
Sbjct: 214 --GATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
G F F+ +L++L D+ +R
Sbjct: 272 VSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVK--------- 192
Query: 205 MTGET----GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
G T G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + +
Sbjct: 193 --GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
G F F+ +L++L D+ +R
Sbjct: 251 VSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 84
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 145 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWTLCGTPEYLAP 193
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 251
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 252 KDLLRNLLQVDLTKR 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 130/272 (47%), Gaps = 35/272 (12%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+++ +++V DFG +K +K
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLII--DQQGYIQVTDFGFAKRVK--------- 192
Query: 205 MTGET----GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
G T G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + +
Sbjct: 193 --GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQR 292
G F F+ +L++L D+ +R
Sbjct: 251 VSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K +GT IK+ S S + ++ EVN+L ++RHPNI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH++ I
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR--IA 137
Query: 165 HRDLKPRNVLLVNSSADH--LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L++ + + +K+ DFG++ I+ N + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-----EFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 13/216 (6%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAYWR-GTPVAIKRILPSLSDDRLVIQDFRHEVNLL 94
E+ + +F + I+G+G FG++ K G VA+KR+ + + F+ EV ++
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQTEVEMI 81
Query: 95 VKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS----TAVNFALDIA 150
H N+++ G +L+ Y+ G + L+E+ P AL A
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 151 RGMAYLHNEPN-VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
RG+AYLH+ + IIHRD+K N+LL VGDFGL+KL+ ++ H + G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGE 245
G ++APE K +K DVF + ++L E++ G+
Sbjct: 200 G---HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K +GT IK+ S S + ++ EVN+L ++RHPNI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH++ I
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR--IA 130
Query: 165 HRDLKPRNVLLVNSSADH--LKVGDFGLSKLIKVQNS-HDVYKMTGETGSYRYMAPEVFK 221
H DLKP N++L++ + + +K+ DFG++ I+ N +++ G+ ++APE+
Sbjct: 131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------GTPEFVAPEIVN 184
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + D++S +I Y +L G P
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 45 SSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
S + I+G G FG++ K G +A K I D+ ++ ++E++++ +L H N+
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANL 148
Query: 103 VQFLGAVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
+Q A + ++L+ EY+ GG+L + + E L+ + F I G+ ++H
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ--M 206
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK 221
I+H DLKP N+L VN A +K+ DFGL++ K + K+ G+ ++APEV
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-----KLKVNFGTPEFLAPEVVN 261
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++Y+M G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 50 IGKGSFGEILKAYW----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
+G G FG +L+ W G VAIK+ LS + + E+ ++ KL HPN+V
Sbjct: 23 LGTGGFGYVLR--WIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPNVVSA 78
Query: 106 ------LGAVTERKPLMLITEYLRGGDLHKYLKE---KGALSPSTAVNFALDIARGMAYL 156
L + +L EY GGDL KYL + L DI+ + YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGE-TGSYRY 214
H N IIHRDLKP N++L + K+ D G +K + D ++ E G+ +Y
Sbjct: 139 HE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------DQGELCTEFVGTLQY 190
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEG-EPPLANYEPYEAAKYVAE 262
+APE+ + +KY VD +SF + +E + G P L N++P + V E
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 50 IGKGSFGEILKAYW----RGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
+G G FG +L+ W G VAIK+ LS + + E+ ++ KL HPN+V
Sbjct: 22 LGTGGFGYVLR--WIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPNVVSA 77
Query: 106 ------LGAVTERKPLMLITEYLRGGDLHKYLKE---KGALSPSTAVNFALDIARGMAYL 156
L + +L EY GGDL KYL + L DI+ + YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGE-TGSYRY 214
H N IIHRDLKP N++L + K+ D G +K + D ++ E G+ +Y
Sbjct: 138 HE--NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------DQGELCTEFVGTLQY 189
Query: 215 MAPEVFKHRKYDKKVDVFSFAMILYEMLEG-EPPLANYEPYEAAKYVAE 262
+APE+ + +KY VD +SF + +E + G P L N++P + V E
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G + A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V +++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ +++V DFGL+K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLMI--DQQGYIQVTDFGLAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 131/297 (44%), Gaps = 47/297 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRH-EVNLLVKLRHPNIVQFLGA 108
IGKG +GE+ WRG VA+K + FR E+ V +RH NI+ F+ A
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASW-----FRETEIYQTVLMRHENILGFIAA 99
Query: 109 ----VTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE----- 159
L LIT+Y G L+ YLK L + + A G+ +LH E
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 160 -PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ K I N D+ T G+ RYM P
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGT--CCIADLGLAVKFISDTNEVDIPPNT-RVGTKRYMPP 215
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEML----------EGEPPLANYEP----YEAA 257
EV H + D++SF +IL+E+ E + P + P YE
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDM 275
Query: 258 KYVA--EGHRPFFRAKGFTPE-LRE---LTEKCWAADMNQRPSFLDILKRLEKIKET 308
+ + + RP F + + E LR+ L +CWA + R + L + K L K+ E+
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEI-LKAY-----WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ L Y G VA+K + + ++ E+ +L L H +IV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 73
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
++ G ++ K + L+ EY+ G L YL + + + + FA I GMAYLH +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQH- 131
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM--TGETGSYRYMAPEV 219
IHR L RNVLL N +K+GDFGL+K V H+ Y++ G++ + Y APE
Sbjct: 132 -YIHRALAARNVLLDNDRL--VKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY-APEC 185
Query: 220 FKHRKYDKKVDVFSFAMILYEML----EGEPPLANYEP-----------YEAAKYVAEGH 264
K K+ DV+SF + LYE+L + P + + + G
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 245
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
R R E+ L + CW + + RP+F +++ L+ +E
Sbjct: 246 R-LPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWTLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 50 IGKGSFGEI-LKAY-----WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G+G FG++ L Y G VA+K + + ++ E+ +L L H +IV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 74
Query: 104 QFLGAVTER--KPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
++ G ++ K + L+ EY+ G L YL + + + + FA I GMAYLH +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQH- 132
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM--TGETGSYRYMAPEV 219
IHR L RNVLL N +K+GDFGL+K V H+ Y++ G++ + Y APE
Sbjct: 133 -YIHRALAARNVLLDNDRL--VKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWY-APEC 186
Query: 220 FKHRKYDKKVDVFSFAMILYEML----EGEPPLANYEP-----------YEAAKYVAEGH 264
K K+ DV+SF + LYE+L + P + + + G
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGE 246
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
R R E+ L + CW + + RP+F +++ L+ +E
Sbjct: 247 R-LPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 152 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 200
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 258
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 259 KDLLRNLLQVDLTKR 273
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 50 IGKGSFGEILKAYWRGTPV--AIKRILPSLSDDRLVIQDFRHEVNLLVKL-RHPNIVQFL 106
IG GS+ + + T + A+K I S D E+ +L++ +HPNI+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT-------EEIEILLRYGQHPNIITLK 82
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ K + ++TE ++GG+L + + S A I + + YLH + ++HR
Sbjct: 83 DVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG--VVHR 140
Query: 167 DLKPRNVLLVNSSA--DHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
DLKP N+L V+ S + +++ DFG +K ++ +N + + ++APEV + +
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENG----LLMTPCYTANFVAPEVLERQG 196
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLAN 250
YD D++S ++LY ML G P AN
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKAYWRGTPVAIK-RILPSLSDDRLVIQD---FRHEVNL 93
DPS F ++G+GSFG++ P + + L L ++D + E ++
Sbjct: 26 DPSH--FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 94 LVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGM 153
L + HP +V+ A L LI ++LRGGDL L ++ + + ++A G+
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
+LH+ II+RDLKP N+LL H+K+ DFGLSK + + Y G+
Sbjct: 144 DHLHSLG--IIYRDLKPENILL--DEEGHIKLTDFGLSKE-AIDHEKKAYSF---CGTVE 195
Query: 214 YMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV--AEGHRPFFRAK 271
YMAPEV + + D +S+ ++++EML G P + E + A+ P F +
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLST 255
Query: 272 GFTPELRELTEKCWAADMNQRPSFLDILKR 301
LR L ++ A + P + +KR
Sbjct: 256 EAQSLLRALFKRNPANRLGSGPDGAEEIKR 285
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 51 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 106
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G A
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 166
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 215
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 276 VRF--PSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 44 FSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ + ++G+GS+G ++K + G VAIK+ L S DD++V + E+ LL +LRH N
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES-DDDKMVKKIAMREIKLLKQLRHEN 85
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPN 161
+V L ++K L+ E++ L L + I G+ + H+
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN- 144
Query: 162 VIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF- 220
IIHRD+KP N+L+ S +K+ DFG ++ + +VY E + Y APE+
Sbjct: 145 -IIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPG--EVY--DDEVATRWYRAPELLV 197
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEP 246
KY K VDV++ ++ EM GEP
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEP 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 25 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 80
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G A
Sbjct: 81 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 140
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 141 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 189
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 249
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 250 VRF--PSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 43 DFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F ++GKG+FG+++ K G A+K + + + + E +L RHP
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
+ + L + EY GG+L +L + S A + +I + YLH+E
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
NV ++RDLK N++L H+K+ DFGL K + D M G+ Y+APEV
Sbjct: 269 NV-VYRDLKLENLMLDKDG--HIKITDFGLCK----EGIKDGATMKTFCGTPEYLAPEVL 321
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+ Y + VD + +++YEM+ G P N + + + + F R G PE + L
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG--PEAKSL 379
Query: 281 TEKCWAADMNQR 292
D QR
Sbjct: 380 LSGLLKKDPKQR 391
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 43 DFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F ++GKG+FG+++ K G A+K + + + + E +L RHP
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
+ + L + EY GG+L +L + S A + +I + YLH+E
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
NV ++RDLK N++L H+K+ DFGL K + D M G+ Y+APEV
Sbjct: 131 NV-VYRDLKLENLMLDKDG--HIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVL 183
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+ Y + VD + +++YEM+ G P N + + + + F R G PE + L
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG--PEAKSL 241
Query: 281 TEKCWAADMNQR 292
D QR
Sbjct: 242 LSGLLKKDPKQR 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 43 DFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F ++GKG+FG+++ K G A+K + + + + E +L RHP
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
+ + L + EY GG+L +L + S A + +I + YLH+E
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
NV ++RDLK N++L H+K+ DFGL K + D M G+ Y+APEV
Sbjct: 129 NV-VYRDLKLENLMLDKDG--HIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVL 181
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+ Y + VD + +++YEM+ G P N + + + + F R G PE + L
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG--PEAKSL 239
Query: 281 TEKCWAADMNQR 292
D QR
Sbjct: 240 LSGLLKKDPKQR 251
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 50 IGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IGKGSFG++ T A+K + +R +++ E+ ++ L HP +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + + + ++ + L GGDL +L++ T F ++ + YL N+ IIHRD
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR--IIHRD 140
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK--- 224
+KP N+LL H+ + DF ++ ++ + ++T G+ YMAPE+F RK
Sbjct: 141 MKPDNILL--DEHGHVHITDFNIAAMLPRET-----QITTMAGTKPYMAPEMFSSRKGAG 193
Query: 225 YDKKVDVFSFAMILYEMLEGEPP 247
Y VD +S + YE+L G P
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 43 DFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F ++GKG+FG+++ K G A+K + + + + E +L RHP
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
+ + L + EY GG+L +L + S A + +I + YLH+E
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
NV ++RDLK N++L H+K+ DFGL K + D M G+ Y+APEV
Sbjct: 272 NV-VYRDLKLENLMLDKDG--HIKITDFGLCK----EGIKDGATMKTFCGTPEYLAPEVL 324
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+ Y + VD + +++YEM+ G P N + + + + F R G PE + L
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG--PEAKSL 382
Query: 281 TEKCWAADMNQR 292
D QR
Sbjct: 383 LSGLLKKDPKQR 394
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G S A +A I YLH
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 180 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 228
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 286
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 287 KDLLRNLLQVDLTKR 301
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 43 DFSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F ++GKG+FG+++ K G A+K + + + + E +L RHP
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
+ + L + EY GG+L +L + S A + +I + YLH+E
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
NV ++RDLK N++L H+K+ DFGL K + D M G+ Y+APEV
Sbjct: 130 NV-VYRDLKLENLMLDKDG--HIKITDFGLCK----EGIKDGATMKXFCGTPEYLAPEVL 182
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELREL 280
+ Y + VD + +++YEM+ G P N + + + + F R G PE + L
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG--PEAKSL 240
Query: 281 TEKCWAADMNQR 292
D QR
Sbjct: 241 LSGLLKKDPKQR 252
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+AP + + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 14/219 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A + G VA+K++ R ++ + EV ++ H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYHHDNVVDMYS 109
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + R ++YLHN+ +IHRD
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQG--VIHRD 166
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL +S +K+ DFG Q S +V K G+ +MAPEV Y
Sbjct: 167 IKSDSILL--TSDGRIKLSDFGFC----AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRP 266
+VD++S +++ EM++GEPP N P +A + + + P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 27/267 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------R 194
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
G+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQ 291
F F+ +L++L D+ +
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTK 279
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 67
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 127 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 242
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 243 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 27/235 (11%)
Query: 49 IIGKGSFGEILKAYWRGT---------PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR- 98
+IG+G + + R T V +R+ P ++ V + R E ++L ++
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEE--VREATRRETHILRQVAG 158
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP+I+ + + + L+ + +R G+L YL EK ALS + + +++LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH- 217
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
N I+HRDLKP N+LL ++ +++ DFG S ++ + ++ G G Y+APE
Sbjct: 218 -ANNIVHRDLKPENILLDDNM--QIRLSDFGFS--CHLEPGEKLRELCGTPG---YLAPE 269
Query: 219 VFK------HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPF 267
+ K H Y K+VD+++ +IL+ +L G PP + + + EG F
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF 324
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 72
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 132 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 247
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 248 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 303
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 144
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 145 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 194
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL----ANYEPYEAAKYVAEGHRPFFRAKGFTPE 276
+ Y + D++S + L EM G P+ + +E Y+ P + F+ E
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLE 254
Query: 277 LRELTEKCWAADMNQRPSFLDIL 299
++ KC + +R ++
Sbjct: 255 FQDFVNKCLIKNPAERADLKQLM 277
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 44 FSSSAIIGKGSFGEILKAYWRGTP--VAIKRI-LPSLSDDRLVIQDFRHEVNLLVKLRHP 100
F +G G+F E++ A + T A+K I +L I++ E+ +L K++H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN---EIAVLRKIKHE 80
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NIV L L+ + + GG+L + EKG + A + + YLH
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 161 NVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I+HRDLKP N+L + + + + DFGLSK+ + DV M+ G+ Y+APEV
Sbjct: 141 --IVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDV--MSTACGTPGYVAPEV 193
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y K VD +S +I Y +L G PP
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 66
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 126 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 69
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 129 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 244
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 245 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 300
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 50 IGKGSFGEILKAYWRGT------PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+G G F + K +GT KR L S S + ++ EVN+L ++RHPNI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXS-SRRGVSREEIEREVNILREIRHPNII 92
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH++ I
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR--I 150
Query: 164 IHRDLKPRNVLLVNSSADH--LKVGDFGLSKLIKVQNS-HDVYKMTGETGSYRYMAPEVF 220
H DLKP N++L++ + + +K+ DFG++ I+ N +++ G+ ++APE+
Sbjct: 151 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------GTPEFVAPEIV 204
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + D++S +I Y +L G P
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 49 IIGKGSFGEILKAYWRGT----PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+IGKG F + + R T V I + S L +D + E ++ L+HP+IV+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKG----ALSPSTAVNFALDIARGMAYLHNEP 160
L + L ++ E++ G DL + ++ S + A ++ I + Y H+
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 150
Query: 161 NVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
N IIHRD+KP VLL + ++ +K+G FG++ +Q G G+ +MAPEV
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA----IQLGESGLVAGGRVGTPHFMAPEV 206
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
K Y K VDV+ +IL+ +L G P
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 49 IIGKGSFGEILKAYWRGT----PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+IGKG F + + R T V I + S L +D + E ++ L+HP+IV+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKG----ALSPSTAVNFALDIARGMAYLHNEP 160
L + L ++ E++ G DL + ++ S + A ++ I + Y H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-- 148
Query: 161 NVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
N IIHRD+KP VLL + ++ +K+G FG++ +Q G G+ +MAPEV
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA----IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
K Y K VDV+ +IL+ +L G P
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 92
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 152 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 267
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 268 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 323
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 38 DPSELDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLV 95
DP L S IG+GS G + A + G VA+K + R ++ +EV ++
Sbjct: 42 DPRLL-LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL---FNEVVIMR 97
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+H N+V+ + + L ++ E+L+GG L + + L+ + + +AY
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAY 156
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH + +IHRD+K ++LL +K+ DFG Q S DV K G+ +M
Sbjct: 157 LHAQG--VIHRDIKSDSILLTLDG--RVKLSDFGFC----AQISKDVPKRKXLVGTPYWM 208
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFT 274
APEV Y +VD++S +++ EM++GEPP + P +A K + + P + + +
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVS 268
Query: 275 PELRELTEKCWAADMNQRPSFLDILKRLEKIKETLP 310
P LR+ E+ D +R + ++L ++ LP
Sbjct: 269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLP 304
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +G+G FG + +A + AIKRI L + L + EV L KL HP
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLEHP 63
Query: 101 NIVQFLGAVTERKP------------LMLITEYLRGGDLHKYLKEKGALSP---STAVNF 145
IV++ A E+ L + + R +L ++ + + S ++
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY-- 203
L IA + +LH++ ++HRDLKP N+ + D +KVGDFGL +
Sbjct: 124 FLQIAEAVEFLHSKG--LMHRDLKPSNIFF--TMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 204 ------KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 242
+ TG+ G+ YM+PE Y KVD+FS +IL+E+L
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQD---FRHEVNLLVKLRHPNIVQFL 106
+GKG+F + + P + ++ +L +D E + L+HPNIV+
Sbjct: 12 LGKGAFSVVRRCM--KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+++E L+ + + GG+L + + + S + A + I + + H N I+HR
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH--LNGIVHR 127
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+LL + S +K+ DFGL+ I+VQ + G G+ Y++PEV + Y
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAW--FGFAGTPGYLSPEVLRKDPY 183
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAK--GFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + + G F + TPE ++L K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + + LK
Sbjct: 244 MLTINPAKRITASEALK 260
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLMI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ HPNI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQD---FRHEVNLLVKLRHPNIVQFL 106
+GKG+F + + P + ++ +L +D E + L+HPNIV+
Sbjct: 12 LGKGAFSVVRRCM--KIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+++E L+ + + GG+L + + + S + A + I + + H N I+HR
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH--LNGIVHR 127
Query: 167 DLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
DLKP N+LL + S +K+ DFGL+ I+VQ + G G+ Y++PEV + Y
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAW--FGFAGTPGYLSPEVLRKDPY 183
Query: 226 DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAK--GFTPELRELTEK 283
K VD+++ +ILY +L G PP + + + + + G F + TPE ++L K
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 243
Query: 284 CWAADMNQRPSFLDILK 300
+ +R + + LK
Sbjct: 244 MLTINPAKRITASEALK 260
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G A +A I YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY+ GG++ +L+ G A +A I YLH
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+L+ +++V DFG +K +K + G+ Y+AP
Sbjct: 152 SLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKG-------RTWXLCGTPEYLAP 200
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 258
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 259 KDLLRNLLQVDLTKR 273
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAV 109
IGKG FGE+ + WRG VA+K + S ++R ++ E+ V LRH NI+ F+ A
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVK--IFSSREERSWFRE--AEIYQTVMLRHENILGFIAAD 105
Query: 110 TERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE------ 159
+ L L+++Y G L YL + ++ + AL A G+A+LH E
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 164
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT--GETGSYRYMAP 217
I HRDLK +N+L+ + + D GL+ ++ ++ D + G+ RYMAP
Sbjct: 165 KPAIAHRDLKSKNILVKKNGT--CCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 218 EVF------KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY---------------EA 256
EV KH + K+ D+++ ++ +E+ +E Y E
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 280
Query: 257 AKYVAEGH-RPFFRAKGFTPE----LRELTEKCWAADMNQRPSFLDILKRLEKIKE 307
K V E RP + + E + ++ +CW A+ R + L I K L ++ +
Sbjct: 281 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 27/268 (10%)
Query: 35 WEI---DPSELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDF 87
WE + ++LD F +G GSFG ++ K G A+K L ++V ++
Sbjct: 30 WETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQI 85
Query: 88 RHEVN---LLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
H +N +L + P +V+ + + L ++ EY+ GG++ +L+ G S A
Sbjct: 86 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+A I YLH+ +I+RDLKP N+L+ +++V DFG +K +K + +
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI--DQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 205 MTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
+ G + +APE+ + Y+K VD ++ +++YEM G PP +P + + + G
Sbjct: 198 LCGTPEA---LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQR 292
F F+ +L++L D+ +R
Sbjct: 255 VRF--PSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P + + + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 50 IGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G++GE+ KA T VAIKRI ++ + R EV+LL +L+H NI++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKS 100
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L LI EY DL KY+ + +S +F + G+ + H+ +HRD
Sbjct: 101 VIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS--RRCLHRD 157
Query: 168 LKPRNVLLVNSSADH---LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV-FKHR 223
LKP+N+LL S A LK+GDFGL++ + + + T E + Y PE+ R
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAFGIP----IRQFTHEIITLWYRPPEILLGSR 213
Query: 224 KYDKKVDVFSFAMILYEMLEGEP 246
Y VD++S A I EML P
Sbjct: 214 HYSTSVDIWSIACIWAEMLMKTP 236
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P + + + + L ++ EY GG++ +L+ G S A +A I YLH
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG + + R G A K ++ D+ + R E+ + LRHP +V
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKEIQTMSVLRHPTLVNLHD 221
Query: 108 AVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
A + +++I E++ GG+L K E +S AV + + +G+ ++H N +H
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE--NNYVHL 279
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DLKP N++ ++ LK+ DFGL+ + + S V TG+ + APEV + +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-----TTGTAEFAAPEVAEGKPVG 334
Query: 227 KKVDVFSFAMILYEMLEGEPPLA 249
D++S ++ Y +L G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSPFG 357
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GSFG++ AY G VA+K I + + E++ L LRHP+I++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + ++++ EY G +L Y+ ++ +S A F I + Y H I+HRD
Sbjct: 82 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRD 138
Query: 168 LKPRNVLLVNSSADHL--KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
LKP N+LL +HL K+ DFGLS ++ N + GS Y APEV + Y
Sbjct: 139 LKPENLLL----DEHLNVKIADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLY 189
Query: 226 -DKKVDVFSFAMILYEML 242
+VDV+S +ILY ML
Sbjct: 190 AGPEVDVWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GSFG++ AY G VA+K I + + E++ L LRHP+I++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + ++++ EY G +L Y+ ++ +S A F I + Y H I+HRD
Sbjct: 81 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRD 137
Query: 168 LKPRNVLLVNSSADHL--KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
LKP N+LL +HL K+ DFGLS ++ N + GS Y APEV + Y
Sbjct: 138 LKPENLLL----DEHLNVKIADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLY 188
Query: 226 -DKKVDVFSFAMILYEMLEGEPPL 248
+VDV+S +ILY ML P
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG + + R G A K ++ D+ + R E+ + LRHP +V
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKEIQTMSVLRHPTLVNLHD 115
Query: 108 AVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
A + +++I E++ GG+L K E +S AV + + +G+ ++H N +H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE--NNYVHL 173
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
DLKP N++ ++ LK+ DFGL+ + + S V TG+ + APEV + +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-----TTGTAEFAAPEVAEGKPVG 228
Query: 227 KKVDVFSFAMILYEMLEGEPPLA 249
D++S ++ Y +L G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSPFG 251
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 44 FSSSAIIGKGSFGEIL-------------KAYWRGTPVAIKRILPSLSDDRLVIQDFRHE 90
F +G GSFG ++ K + V +K+I +L++ R+ +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI-----QQA 98
Query: 91 VNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIA 150
VN P +V+ + + L ++ EY GG++ +L+ G S A +A I
Sbjct: 99 VNF------PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 151 RGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETG 210
YLH+ +I+RDLKP N+L+ ++KV DFG +K +K + G
Sbjct: 153 LTFEYLHSLD--LIYRDLKPENLLI--DQQGYIKVADFGFAKRVKG-------RTWXLCG 201
Query: 211 SYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRA 270
+ Y+APE+ + Y+K VD ++ +++YEM G PP +P + + + G F
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--P 259
Query: 271 KGFTPELRELTEKCWAADMNQR 292
F+ +L++L D+ +R
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P +V+ + + L ++ EY GG++ +L+ G A +A I YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 159 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 207
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 265
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 266 KDLLRNLLQVDLTKR 280
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GSFG++ AY G VA+K I + + E++ L LRHP+I++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + ++++ EY G +L Y+ ++ +S A F I + Y H I+HRD
Sbjct: 72 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRD 128
Query: 168 LKPRNVLLVNSSADHL--KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
LKP N+LL +HL K+ DFGLS ++ N + GS Y APEV + Y
Sbjct: 129 LKPENLLL----DEHLNVKIADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLY 179
Query: 226 -DKKVDVFSFAMILYEML 242
+VDV+S +ILY ML
Sbjct: 180 AGPEVDVWSCGVILYVML 197
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+GSFG++ AY G VA+K I + + E++ L LRHP+I++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ + ++++ EY G +L Y+ ++ +S A F I + Y H I+HRD
Sbjct: 76 VIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRD 132
Query: 168 LKPRNVLLVNSSADHL--KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY 225
LKP N+LL +HL K+ DFGLS ++ N + GS Y APEV + Y
Sbjct: 133 LKPENLLL----DEHLNVKIADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLY 183
Query: 226 -DKKVDVFSFAMILYEML 242
+VDV+S +ILY ML
Sbjct: 184 AGPEVDVWSCGVILYVML 201
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 50 IGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFR-HEVNLLVKLRHPNIVQFL 106
+G+GSFGE+ ++ G A+K++ RL + FR E+ L P IV
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEV--FRAEELMACAGLTSPRIVPLY 132
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
GAV E + + E L GG L + +KE+G L A+ + G+ YLH+ I+H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHS--RRILHG 190
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQN-SHDVYKMTGE--TGSYRYMAPEVFKHR 223
D+K NVLL +S H + DFG + ++ D+ +TG+ G+ +MAPEV R
Sbjct: 191 DVKADNVLL-SSDGSHAALCDFGHAVCLQPDGLGKDL--LTGDYIPGTETHMAPEVVLGR 247
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPLANY 251
D KVDV+S ++ ML G P +
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHPWTQF 275
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 19/257 (7%)
Query: 44 FSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
F ++GKG FGE+ R T A K++ R +E +L K+
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDL--HKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
+V A + L L+ + GGDL H Y + + AV +A +I G+ LH E
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I++RDLKP N+LL + H+++ D GL+ + V + G G+ YMAPEV
Sbjct: 306 --RIVYRDLKPENILLDDHG--HIRISDLGLA--VHVPEGQTI---KGRVGTVGYMAPEV 356
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY----EAAKYVAEGHRPFFRAKGFTP 275
K+ +Y D ++ +LYEM+ G+ P + E + V E + ++ F+P
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY--SERFSP 414
Query: 276 ELRELTEKCWAADMNQR 292
+ R L + D +R
Sbjct: 415 QARSLCSQLLCKDPAER 431
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 50 IGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFR-HEVNLLVKLRHPNIVQFL 106
+G+GSFGE+ ++ G A+K++ RL + FR E+ L P IV
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEV--FRAEELMACAGLTSPRIVPLY 151
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
GAV E + + E L GG L + +KE+G L A+ + G+ YLH+ I+H
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHS--RRILHG 209
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE--TGSYRYMAPEVFKHRK 224
D+K NVLL +S H + DFG + ++ +TG+ G+ +MAPEV R
Sbjct: 210 DVKADNVLL-SSDGSHAALCDFGHAVCLQPDGLGKSL-LTGDYIPGTETHMAPEVVLGRS 267
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANY 251
D KVDV+S ++ ML G P +
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQF 294
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 19/257 (7%)
Query: 44 FSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
F ++GKG FGE+ R T A K++ R +E +L K+
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 102 IVQFLGAVTERKPLMLITEYLRGGDL--HKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
+V A + L L+ + GGDL H Y + + AV +A +I G+ LH E
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
I++RDLKP N+LL + H+++ D GL+ + V + G G+ YMAPEV
Sbjct: 306 --RIVYRDLKPENILLDDHG--HIRISDLGLA--VHVPEGQTI---KGRVGTVGYMAPEV 356
Query: 220 FKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPY----EAAKYVAEGHRPFFRAKGFTP 275
K+ +Y D ++ +LYEM+ G+ P + E + V E + ++ F+P
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEY--SERFSP 414
Query: 276 ELRELTEKCWAADMNQR 292
+ R L + D +R
Sbjct: 415 QARSLCSQLLCKDPAER 431
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +GKG FG + A + + VA+K + S + V R E+ + L HP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEP 160
NI++ +R+ + LI EY G+L+K L++ ++A + Y H +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
+IHRD+KP N+LL LK+ DFG S ++ + + T G+ Y+ PE+
Sbjct: 144 --VIHRDIKPENLLLGLKGE--LKIADFGWS-----VHAPSLRRKTM-CGTLDYLPPEMI 193
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ R +++KVD++ ++ YE+L G PP
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
+ +G FG + KA VA+K I P D+ Q+ +EV L ++H NI+QF+GA
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVK-IFPI--QDKQSWQN-EYEVYSLPGMKHENILQFIGA 86
Query: 109 ----VTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE-PNV- 162
+ L LIT + G L +LK +S + + A +ARG+AYLH + P +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLK-ANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 163 ------IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMA 216
I HRD+K +NVLL N+ + DFGL+ +K + G+ G+ RYMA
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLT--ACIADFGLA--LKFEAGKSAGDTHGQVGTRRYMA 201
Query: 217 PEVFK-----HRKYDKKVDVFSFAMILYE---------------MLEGEPPLANYEPYEA 256
PEV + R ++D+++ ++L+E ML E + + E
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261
Query: 257 AKYVA--EGHRP----FFRAKGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIK 306
+ V + RP +++ L E E+CW D R S + +R+ +++
Sbjct: 262 MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 63
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 124 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKXFCGTPEYLAPE 175
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 233
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 234 SLLAGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 63
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 124 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKTFCGTPEYLAPE 175
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 233
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 234 SLLAGLLKKDPKQR 247
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 85 QDFRHEVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAV 143
+D E+ +L++ +HPNI+ + K + ++TE +GG+L + + S A
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS 119
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSA--DHLKVGDFGLSKLIKVQNSHD 201
I + + YLH + ++HRDLKP N+L V+ S + +++ DFG +K ++ +N
Sbjct: 120 AVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-- 175
Query: 202 VYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLAN 250
+ + ++APEV + + YD D++S ++LY L G P AN
Sbjct: 176 --LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 66
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 127 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKTFCGTPEYLAPE 178
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 236
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 237 SLLAGLLKKDPKQR 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 126 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEG-------------EPPLANYEPYEAAKYVAEGHRPF 267
+ Y + D++S + L EM G PP+A +E + Y+ P
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLD---YIVNEPPPK 232
Query: 268 FRAKGFTPELRELTEKCWAADMNQR 292
+ F+ E ++ KC + +R
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAER 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 63
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 124 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKXFCGTPEYLAPE 175
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 233
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 234 SLLAGLLKKDPKQR 247
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 23/255 (9%)
Query: 44 FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRILPSLSDDRLV-IQDFRHEVN---LLVKL 97
F +G GSFG ++ K G A+K L ++V ++ H +N +L +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 98 RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLH 157
P + + + + L ++ EY GG++ +L+ G A +A I YLH
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ +I+RDLKP N+++ ++KV DFG +K +K + G+ Y+AP
Sbjct: 160 SLD--LIYRDLKPENLMI--DQQGYIKVTDFGFAKRVKG-------RTWXLCGTPEYLAP 208
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPEL 277
E+ + Y+K VD ++ +++YEM G PP +P + + + G F F+ +L
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDL 266
Query: 278 RELTEKCWAADMNQR 292
++L D+ +R
Sbjct: 267 KDLLRNLLQVDLTKR 281
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 68
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 129 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKXFCGTPEYLAPE 180
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 238
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 239 SLLAGLLKKDPKQR 252
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 63
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 124 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKXFCGTPEYLAPE 175
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 233
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 234 SLLAGLLKKDPKQR 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 15/265 (5%)
Query: 50 IGKGSFGE--ILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG+ I + G VA+K + V+ + E+ L RHP+I++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
++ ++ EY+ GG+L Y+ + G + A I + Y H ++++HRD
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR--HMVVHRD 136
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY-D 226
LKP NVLL + + K+ DFGLS ++ D + GS Y APEV R Y
Sbjct: 137 LKPENVLL--DAHMNAKIADFGLSNMMS-----DGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWA 286
+VD++S +ILY +L G P + K + G F+ + + L
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRSVATLLMHMLQ 247
Query: 287 ADMNQRPSFLDILKRLEKIKETLPT 311
D +R + DI + E K+ LP+
Sbjct: 248 VDPLKRATIKDI-REHEWFKQDLPS 271
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 135
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 190
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 43 DFSSSAIIGKGSFGEIL----KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
DF ++GKG+FG+++ KA R + I R ++ D + E +L R
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTR 63
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + A L + EY GG+L +L + + A + +I + YLH+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+++RD+K N++L H+K+ DFGL K + D M G+ Y+APE
Sbjct: 124 RD--VVYRDIKLENLMLDKDG--HIKITDFGLCK----EGISDGATMKTFCGTPEYLAPE 175
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELR 278
V + Y + VD + +++YEM+ G P N + + + F R +PE +
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAK 233
Query: 279 ELTEKCWAADMNQR 292
L D QR
Sbjct: 234 SLLAGLLKKDPKQR 247
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 135
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 190
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRI--LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G FG + K Y T VA+K++ + ++ + L Q F E+ ++ K +H N+V+ LG
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLG 97
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPST---AVNFALDIARGMAYLHNEPNVII 164
++ L L+ Y+ G L L P + A A G+ +LH N I
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE--NHHI 155
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLI-KVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
HRD+K N+LL A K+ DFGL++ K + ++ G T YMAPE +
Sbjct: 156 HRDIKSANILL--DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA---YMAPEALRG- 209
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPL 248
+ K D++SF ++L E++ G P +
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAV 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNS-HDVYKMTGETGSYRYMAPEVFK 221
H DLKP N++L+ N +K+ DFGL+ I N +++ G+ ++APE+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFVAPEIVN 190
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + D++S +I Y +L G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRI--LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G FG + K Y T VA+K++ + ++ + L Q F E+ ++ K +H N+V+ LG
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLG 97
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPST---AVNFALDIARGMAYLHNEPNVII 164
++ L L+ Y+ G L L P + A A G+ +LH N I
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE--NHHI 155
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLI-KVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
HRD+K N+LL A K+ DFGL++ K + ++ G T YMAPE +
Sbjct: 156 HRDIKSANILL--DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA---YMAPEALRG- 209
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPL 248
+ K D++SF ++L E++ G P +
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLPAV 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 50 IGKGSFGE--ILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG+ I + G VA+K + V+ + E+ L RHP+I++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
++ ++ EY+ GG+L Y+ + G + A I + Y H ++++HRD
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR--HMVVHRD 136
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKY-D 226
LKP NVLL + + K+ DFGLS ++ D + GS Y APEV R Y
Sbjct: 137 LKPENVLL--DAHMNAKIADFGLSNMMS-----DGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 227 KKVDVFSFAMILYEMLEGEPPL 248
+VD++S +ILY +L G P
Sbjct: 190 PEVDIWSCGVILYALLCGTLPF 211
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R ++ + EV ++ +H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 88
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQG--VIHRD 145
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 146 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 260 RDPAQRATAAELLK 273
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R + +EV ++ +H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 84
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQG--VIHRD 141
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 142 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 256 RDPAQRATAAELLK 269
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 85 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
Q E + L+HPNIV+ +++E LI + + GG+L + + + S + A +
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNS-SADHLKVGDFGLSKLIKVQNSHDVY 203
I A LH ++HRDLKP N+LL + +K+ DFGL+ I+V+ +
Sbjct: 126 CIQQILE--AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAW 181
Query: 204 KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
G G+ Y++PEV + Y K VD+++ +ILY +L G PP + + + + + G
Sbjct: 182 --FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 239
Query: 264 HRPFFRAK--GFTPELRELTEKCWAADMNQRPSFLDILK 300
F + TPE ++L K + ++R + + LK
Sbjct: 240 AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 278
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R ++ + EV ++ +H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 95
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQG--VIHRD 152
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 153 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 266
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 267 RDPAQRATAAELLK 280
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNS-HDVYKMTGETGSYRYMAPEVFK 221
H DLKP N++L+ N +K+ DFGL+ I N +++ G+ ++APE+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF------GTPEFVAPEIVN 190
Query: 222 HRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + D++S +I Y +L G P
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R ++ + EV ++ +H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 93
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQG--VIHRD 150
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 151 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 265 RDPAQRATAAELLK 278
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 12/239 (5%)
Query: 50 IGKGSFGEILKAYWRGTPVA--IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+GKG+F +++ + TP +I+ + Q E + L+HPNIV+
Sbjct: 39 LGKGAFS-VVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+++E L+ + + GG+L + + + S + A + I + ++H I+HRD
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD--IVHRD 155
Query: 168 LKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
LKP N+LL + +K+ DFGL+ I+VQ + G G+ Y++PEV + Y
Sbjct: 156 LKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAW--FGFAGTPGYLSPEVLRKDPYG 211
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAK--GFTPELRELTEK 283
K VD+++ +ILY +L G PP + + ++ + + G F + TPE + L +
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH---------EV 91
++ S +G G+ GE+ A+ R T VAIK I S + I R E+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKII----SKRKFAIGSAREADPALNVETEI 72
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIAR 151
+L KL HP I++ + + + ++ E + GG+L + L +T + +
Sbjct: 73 EILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETG 210
+ YLH N IIHRDLKP NVLL + D L K+ DFG SK++ + M G
Sbjct: 132 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCG 184
Query: 211 SYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 14/203 (6%)
Query: 50 IGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+G++G + KA R T VA+KR+ DD V E+ LL +L+H NIV+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD-DDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ K L L+ E+ DL KY G L P +F + +G+ + H+ ++HR
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHR 125
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV-FKHRKY 225
DLKP+N LL+N + + LK+ DFGL++ + V + E + Y P+V F + Y
Sbjct: 126 DLKPQN-LLINRNGE-LKLADFGLARAFGIP----VRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
+D++S I E+ PL
Sbjct: 180 STSIDMWSAGCIFAELANAARPL 202
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH---------EV 91
++ S +G G+ GE+ A+ R T VAIK I S + I R E+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKII----SKRKFAIGSAREADPALNVETEI 66
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIAR 151
+L KL HP I++ + + + ++ E + GG+L + L +T + +
Sbjct: 67 EILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETG 210
+ YLH N IIHRDLKP NVLL + D L K+ DFG SK++ + M G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCG 178
Query: 211 SYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + +D EV++L +++HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ ++LI E + GG+L +L EK +L+ A F I G+ YLH+ I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--IA 136
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N +K+ DFGL+ I N + G+ ++APE+ +
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPAFVAPEIVNY 191
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRI--LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G FG + K Y T VA+K++ + ++ + L Q F E+ ++ K +H N+V+ LG
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLG 91
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPST---AVNFALDIARGMAYLHNEPNVII 164
++ L L+ Y+ G L L P + A A G+ +LH N I
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE--NHHI 149
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLI-KVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
HRD+K N+LL A K+ DFGL++ K ++ G T YMAPE +
Sbjct: 150 HRDIKSANILL--DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA---YMAPEALRG- 203
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPL 248
+ K D++SF ++L E++ G P +
Sbjct: 204 EITPKSDIYSFGVVLLEIITGLPAV 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH---------EV 91
++ S +G G+ GE+ A+ R T VAIK I S + I R E+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKII----SKRKFAIGSAREADPALNVETEI 66
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIAR 151
+L KL HP I++ + + + ++ E + GG+L + L +T + +
Sbjct: 67 EILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETG 210
+ YLH N IIHRDLKP NVLL + D L K+ DFG SK++ + M G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCG 178
Query: 211 SYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH---------EV 91
++ S +G G+ GE+ A+ R T VAIK I S + I R E+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKII----SKRKFAIGSAREADPALNVETEI 66
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIAR 151
+L KL HP I++ + + + ++ E + GG+L + L +T + +
Sbjct: 67 EILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETG 210
+ YLH N IIHRDLKP NVLL + D L K+ DFG SK++ + M G
Sbjct: 126 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCG 178
Query: 211 SYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R ++ + EV ++ +H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 138
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ--GVIHRD 195
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 196 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 310 RDPAQRATAAELLK 323
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH---------EV 91
++ S +G G+ GE+ A+ R T VAIK I S + I R E+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKII----SKRKFAIGSAREADPALNVETEI 65
Query: 92 NLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIAR 151
+L KL HP I++ + + + ++ E + GG+L + L +T + +
Sbjct: 66 EILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNSHDVYKMTGETG 210
+ YLH N IIHRDLKP NVLL + D L K+ DFG SK++ + M G
Sbjct: 125 AVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCG 177
Query: 211 SYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS G + A R G VA+K++ R ++ + EV ++ +H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 215
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
+ L ++ E+L GG L + ++ L + + ++ LH + +IHRD
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ--GVIHRD 272
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDK 227
+K ++LL + +K+ DFG Q S +V + G+ +MAPE+ Y
Sbjct: 273 IKSDSILLTHDG--RVKLSDFGFC----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 228 KVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR-AKGFTPELRELTEKCWA 286
+VD++S +++ EM++GEPP N P +A K + + P + +P L+ ++
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 287 ADMNQRPSFLDILK 300
D QR + ++LK
Sbjct: 387 RDPAQRATAAELLK 400
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 34 DWEIDPSEL--DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH 89
D + P L ++ S +G G+ GE+ A+ R T VAI+ I S + I R
Sbjct: 139 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRII----SKRKFAIGSARE 194
Query: 90 ---------EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
E+ +L KL HP I++ + + + ++ E + GG+L + L +
Sbjct: 195 ADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA 253
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNS 199
T + + + YLH N IIHRDLKP NVLL + D L K+ DFG SK++
Sbjct: 254 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----- 306
Query: 200 HDVYKMTGETGSYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ M G+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 307 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 34 DWEIDPSEL--DFSSSAIIGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRH 89
D + P L ++ S +G G+ GE+ A+ R T VAI+ I S + I R
Sbjct: 125 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRII----SKRKFAIGSARE 180
Query: 90 ---------EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS 140
E+ +L KL HP I++ + + + ++ E + GG+L + L +
Sbjct: 181 ADPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA 239
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL-KVGDFGLSKLIKVQNS 199
T + + + YLH N IIHRDLKP NVLL + D L K+ DFG SK++
Sbjct: 240 TCKLYFYQMLLAVQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----- 292
Query: 200 HDVYKMTGETGSYRYMAPEVFKH---RKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ M G+ Y+APEV Y++ VD +S +IL+ L G PP + +
Sbjct: 293 GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 85 QDFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN 144
Q E + L+HPNIV+ +++E LI + + GG+L + + + S + A +
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNS-SADHLKVGDFGLSKLIKVQNSHDVY 203
I A LH ++HR+LKP N+LL + +K+ DFGL+ I+V+ +
Sbjct: 115 CIQQILE--AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAW 170
Query: 204 KMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
G G+ Y++PEV + Y K VD+++ +ILY +L G PP + + + + + G
Sbjct: 171 --FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG 228
Query: 264 HRPFFRAK--GFTPELRELTEKCWAADMNQRPSFLDILK 300
F + TPE ++L K + ++R + + LK
Sbjct: 229 AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 40 SELDFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
S F +G G++ + K + T V + L + E++L+ +L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG------ALSPSTAVNFALDIARGM 153
NIV+ + L L+ E++ DL KY+ + L + F + +G+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
A+ H N I+HRDLKP+N LL+N LK+GDFGL++ + V + E +
Sbjct: 122 AFCHE--NKILHRDLKPQN-LLINKRG-QLKLGDFGLARAFGI----PVNTFSSEVVTLW 173
Query: 214 YMAPEVF-KHRKYDKKVDVFSFAMILYEMLEGEP 246
Y AP+V R Y +D++S IL EM+ G+P
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 15/217 (6%)
Query: 46 SSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIV 103
+S ++G+G++ ++ A G A+K I R + FR L + NI+
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FREVETLYQCQGNKNIL 74
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVI 163
+ + + L+ E L+GG + +++++ + A D+A + +LH + I
Sbjct: 75 ELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG--I 132
Query: 164 IHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHD---VYKMTGETGSYRYMAPEV 219
HRDLKP N+L + +K+ DF L +K+ NS ++T GS YMAPEV
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 220 F-----KHRKYDKKVDVFSFAMILYEMLEGEPPLANY 251
+ YDK+ D++S ++LY ML G PP +
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 16/235 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K R + + + R L L + E+ +L + P I
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LKE + ++ + RG+AYL E +
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR-EKHQ 135
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YMAPE
Sbjct: 136 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMAPERL 185
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTP 275
+ Y + D++S + L E+ G P+ P +A + A RP + P
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIP---PPDAKELEAIFGRPVVDGEEGEP 237
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 50 IGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFR-HEVNLLVKLRHPNIVQFL 106
+G+GSFGE+ +K G A+K++ RL + FR E+ L P IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEV--FRVEELVACAGLSSPRIVPLY 116
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
GAV E + + E L GG L + +K+ G L A+ + G+ YLH I+H
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT--RRILHG 174
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE--TGSYRYMAPEVFKHRK 224
D+K NVLL +S + DFG + ++ +TG+ G+ +MAPEV +
Sbjct: 175 DVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSL-LTGDYIPGTETHMAPEVVMGKP 232
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANY 251
D KVD++S ++ ML G P Y
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 50 IGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFR-HEVNLLVKLRHPNIVQFL 106
+G+GSFGE+ +K G A+K++ RL + FR E+ L P IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEV--FRVEELVACAGLSSPRIVPLY 132
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
GAV E + + E L GG L + +K+ G L A+ + G+ YLH I+H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT--RRILHG 190
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE--TGSYRYMAPEVFKHRK 224
D+K NVLL +S + DFG + ++ +TG+ G+ +MAPEV +
Sbjct: 191 DVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSL-LTGDYIPGTETHMAPEVVMGKP 248
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANY 251
D KVD++S ++ ML G P Y
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 50 IGKGSFGEILKAYWRGTPVA-----IKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQ 104
+G G F + K + T + IK+ S + ++ EV++L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
R ++LI E + GG+L +L +K +LS A +F I G+ YLH + I
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK--IA 137
Query: 165 HRDLKPRNVLLV--NSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
H DLKP N++L+ N H+K+ DFGL+ I+ D + G+ ++APE+ +
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNY 192
Query: 223 RKYDKKVDVFSFAMILYEMLEGEPPL 248
+ D++S +I Y +L G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 50 IGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFR-HEVNLLVKLRHPNIVQFL 106
+G+GSFGE+ +K G A+K++ RL + FR E+ L P IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEV--FRVEELVACAGLSSPRIVPLY 130
Query: 107 GAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
GAV E + + E L GG L + +K+ G L A+ + G+ YLH I+H
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT--RRILHG 188
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE--TGSYRYMAPEVFKHRK 224
D+K NVLL +S + DFG + ++ +TG+ G+ +MAPEV +
Sbjct: 189 DVKADNVLL-SSDGSRAALCDFGHALCLQPDGLGKSL-LTGDYIPGTETHMAPEVVMGKP 246
Query: 225 YDKKVDVFSFAMILYEMLEGEPPLANY 251
D KVD++S ++ ML G P Y
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 14/203 (6%)
Query: 50 IGKGSFGEILKAYWRGT--PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+G++G + KA R T VA+KR+ DD V E+ LL +L+H NIV+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLD-DDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKE-KGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
+ K L L+ E+ DL KY G L P +F + +G+ + H+ ++HR
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHR 125
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV-FKHRKY 225
DLKP+N LL+N + + LK+ +FGL++ + V + E + Y P+V F + Y
Sbjct: 126 DLKPQN-LLINRNGE-LKLANFGLARAFGIP----VRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 226 DKKVDVFSFAMILYEMLEGEPPL 248
+D++S I E+ PL
Sbjct: 180 STSIDMWSAGCIFAELANAGRPL 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG+GS+G + K R G VAIK+ L S DD ++ + E+ +L +L+HPN+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES-EDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRD 167
++ L L+ EY LH+ + + + + + + + H + IHRD
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK--HNCIHRD 127
Query: 168 LKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF-KHRKYD 226
+KP N+L+ S +K+ DFG ++L+ D Y E + Y +PE+ +Y
Sbjct: 128 VKPENILITKHSV--IKLCDFGFARLLT--GPSDYYD--DEVATRWYRSPELLVGDTQYG 181
Query: 227 KKVDVFSFAMILYEMLEGEP 246
VDV++ + E+L G P
Sbjct: 182 PPVDVWAIGCVFAELLSGVP 201
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 126 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 18/259 (6%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQD---FRHEVNLLVKLRHPNIVQ 104
IGKG+F + + G A K I + +L +D E + L+H NIV+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKII----NTKKLSARDHQKLEREARICRLLKHSNIVR 67
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+++E L+ + + GG+L + + + S + A + I A LH ++
Sbjct: 68 LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE--AVLHCHQMGVV 125
Query: 165 HRDLKPRNVLLVNSS-ADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHR 223
HRDLKP N+LL + +K+ DFGL+ I+VQ + G G+ Y++PEV +
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAW--FGFAGTPGYLSPEVLRKE 181
Query: 224 KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAK--GFTPELRELT 281
Y K VD+++ +ILY +L G PP + + ++ + + G F + TPE + L
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 241
Query: 282 EKCWAADMNQRPSFLDILK 300
+ + +R + + LK
Sbjct: 242 NQMLTINPAKRITAHEALK 260
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 152
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 153 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 202
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 126 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 126 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 21 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 135
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 136 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTAD 184
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 125
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 126 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 175
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 21 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 135
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 136 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTAD 184
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 21 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 135
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 136 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTAD 184
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
S ++G G G++L+ + R T K L L D Q+ H P+IV
Sbjct: 33 SKQVLGLGVNGKVLECFHRRT--GQKCALKLLYDSPKARQEVDHHWQ---ASGGPHIVCI 87
Query: 106 LGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHNE 159
L ++ L++I E + GG+L ++E+G A + A DI + +LH+
Sbjct: 88 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS- 146
Query: 160 PNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYR--YMA 216
+ I HRD+KP N+L + D LK+ DFG +K QN+ +T Y Y+A
Sbjct: 147 -HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET-TQNAL-------QTPCYTPYYVA 197
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR--AKGF- 273
PEV KYDK D++S +I+Y +L G PP + + ++ G + R GF
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS----NTGQAISPGMKRRIRLGQYGFP 253
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHW 315
PE E++E D Q L E++ T +H W
Sbjct: 254 NPEWSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPW 290
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNI 102
DF + +G G+ G + K + + + + R L L + E+ +L + P I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
V F GA + + E++ GG L + LK+ G + ++ + +G+ YL E +
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-EKHK 187
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLS-KLI-KVQNSHDVYKMTGETGSYRYMAPEVF 220
I+HRD+KP N+ LVNS + +K+ DFG+S +LI + NS G+ YM+PE
Sbjct: 188 IMHRDVKPSNI-LVNSRGE-IKLCDFGVSGQLIDSMANSF--------VGTRSYMSPERL 237
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D++S + L EM G P+
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HPNIV+ ++ L+ E L GG+L + +K+K S + A + ++++H+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 159 EPNVIIHRDLKPRNVLLVNSSAD-HLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
++HRDLKP N+L + + + +K+ DFG ++L N + + Y AP
Sbjct: 125 VG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ----PLKTPCFTLHYAAP 178
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYE-------PYEAAKYVAEGHRPFFRA 270
E+ YD+ D++S +ILY ML G+ P +++ E K + +G F
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE 238
Query: 271 --KGFTPELRELTEKCWAADMNQR 292
K + E ++L + D N+R
Sbjct: 239 AWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF 105
S ++G G G++L+ + R T K L L D Q+ H P+IV
Sbjct: 14 SKQVLGLGVNGKVLECFHRRT--GQKCALKLLYDSPKARQEVDHHWQ---ASGGPHIVCI 68
Query: 106 LGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHNE 159
L ++ L++I E + GG+L ++E+G A + A DI + +LH+
Sbjct: 69 LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS- 127
Query: 160 PNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYR--YMA 216
+ I HRD+KP N+L + D LK+ DFG +K QN+ +T Y Y+A
Sbjct: 128 -HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET-TQNAL-------QTPCYTPYYVA 178
Query: 217 PEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR--AKGF- 273
PEV KYDK D++S +I+Y +L G PP + + ++ G + R GF
Sbjct: 179 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS----NTGQAISPGMKRRIRLGQYGFP 234
Query: 274 TPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHW 315
PE E++E D Q L E++ T +H W
Sbjct: 235 NPEWSEVSE-----DAKQLIRLLLKTDPTERLTITQFMNHPW 271
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 128 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 179
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT----PVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR 98
+F ++GKGSFG+++ A + T V + + L DD + + L +
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-N 82
Query: 99 HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
HP + Q L + E++ GGDL ++++ + A +A +I + +LH+
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 159 EPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
+ II+RDLK NVLL + H K+ DFG+ K + + G+ Y+APE
Sbjct: 143 KG--IIYRDLKLDNVLLDHEG--HCKLADFGMCK----EGICNGVTTATFCGTPDYIAPE 194
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + Y VD ++ ++LYEML G P
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 40 SELDFSSSAIIGKGSFGEILKAY---WRGTPVAIKRILPSLSDDRLVIQDFRHEVNL--L 94
++ + A IG+G++G++ KA G VA+KR+ ++ + + R L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 95 VKLRHPNIVQFLGAVTERKP-----LMLITEYLRGGDLHKYLKE--KGALSPSTAVNFAL 147
HPN+V+ T + L L+ E++ DL YL + + + T +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+ RG+ +LH+ + ++HRDLKP+N+L+ +S+ +K+ DFGL+++ Q + +T
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMA-----LTS 178
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV Y VD++S I EM +P
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 69
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 128 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 179
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ P + + A +G G++G + A+ G VA+K++ + +R
Sbjct: 24 NKTIWEV-PER--YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 80
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 81 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 138
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 139 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 187
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 188 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 40 SELDFSSSAIIGKGSFGEILKAY---WRGTPVAIKRILPSLSDDRLVIQDFRHEVNL--L 94
++ + A IG+G++G++ KA G VA+KR+ ++ + + R L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 95 VKLRHPNIVQFLGAVTERKP-----LMLITEYLRGGDLHKYLKE--KGALSPSTAVNFAL 147
HPN+V+ T + L L+ E++ DL YL + + + T +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+ RG+ +LH+ + ++HRDLKP+N+L+ +S+ +K+ DFGL+++ Q + +T
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMA-----LTS 178
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV Y VD++S I EM +P
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN ++ LK+ DFGL + H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDSE-LKILDFGLCR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 125 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 176
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 120 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 171
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSL-----SDDRLVIQDFRHEVNLLVK 96
D+ +IG+G+FGE+ + T V ++L SD F E +++
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAF 125
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-----EKGALSPSTAVNFALDIAR 151
P +VQ A + + L ++ EY+ GGDL + EK A + V ALD
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M + IHRD+KP N+LL S HLK+ DFG + N + + G+
Sbjct: 186 SMGF--------IHRDVKPDNMLLDKSG--HLKLADFGTCMKM---NKEGMVRCDTAVGT 232
Query: 212 YRYMAPEVFKHRK----YDKKVDVFSFAMILYEMLEGEPPL 248
Y++PEV K + Y ++ D +S + LYEML G+ P
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 120 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 171
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSL-----SDDRLVIQDFRHEVNLLVK 96
D+ +IG+G+FGE+ + T V ++L SD F E +++
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAF 130
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-----EKGALSPSTAVNFALDIAR 151
P +VQ A + + L ++ EY+ GGDL + EK A + V ALD
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M + IHRD+KP N+LL S HLK+ DFG + N + + G+
Sbjct: 191 SMGF--------IHRDVKPDNMLLDKSG--HLKLADFGTCMKM---NKEGMVRCDTAVGT 237
Query: 212 YRYMAPEVFKHRK----YDKKVDVFSFAMILYEMLEGEPPL 248
Y++PEV K + Y ++ D +S + LYEML G+ P
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 40 SELDFSSSAIIGKGSFGEILKAY---WRGTPVAIKRILPSLSDDRLVIQDFRHEVNL--L 94
++ + A IG+G++G++ KA G VA+KR+ ++ + + R L L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 95 VKLRHPNIVQFLGAVTERKP-----LMLITEYLRGGDLHKYLKE--KGALSPSTAVNFAL 147
HPN+V+ T + L L+ E++ DL YL + + + T +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
+ RG+ +LH+ + ++HRDLKP+N+L+ +S+ +K+ DFGL+++ Q + +T
Sbjct: 128 QLLRGLDFLHS--HRVVHRDLKPQNILV--TSSGQIKLADFGLARIYSFQMA-----LTS 178
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV Y VD++S I EM +P
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGT-PVAIKRILPSL-----SDDRLVIQDFRHEVNLLVK 96
D+ +IG+G+FGE+ + T V ++L SD F E +++
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAF 130
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-----EKGALSPSTAVNFALDIAR 151
P +VQ A + + L ++ EY+ GGDL + EK A + V ALD
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M + IHRD+KP N+LL S HLK+ DFG + N + + G+
Sbjct: 191 SMGF--------IHRDVKPDNMLLDKSG--HLKLADFGTCMKM---NKEGMVRCDTAVGT 237
Query: 212 YRYMAPEVFKHRK----YDKKVDVFSFAMILYEMLEGEPPL 248
Y++PEV K + Y ++ D +S + LYEML G+ P
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 122 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 173
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 27 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 80
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 81 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 140
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 141 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 193
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 194 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 27/265 (10%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH---PNIVQ 104
+G+G++G E ++ G +A+KRI +++ + R ++L + +R P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ----EQKRLLMDLDISMRTVDCPFTVT 70
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKE---KGALSPSTAVN-FALDIARGMAYLHNEP 160
F GA+ + + E L L K+ K+ KG P + A+ I + + +LH++
Sbjct: 71 FYGALFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE-- 218
+VI HRD+KP NVL+ ++ +K+ DFG+S + + D+ + G YMAPE
Sbjct: 130 SVI-HRDVKPSNVLI--NALGQVKMCDFGISGYLVDDVAKDI-----DAGCKPYMAPERI 181
Query: 219 --VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANY-EPYEAAKYVAEGHRPFFRAKGFTP 275
+ Y K D++S + + E+ P ++ P++ K V E P A F+
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA 241
Query: 276 ELRELTEKCWAADMNQRPSFLDILK 300
E + T +C + +RP++ ++++
Sbjct: 242 EFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 26 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR 82
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 140
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 141 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 189
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 20 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 134
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 135 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 183
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 51 GKGSFGEILKAYWRGTPVAIKRI--LPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
G+G FG + K Y T VA+K++ + ++ + L Q F E+ + K +H N+V+ LG
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVXAKCQHENLVELLGF 89
Query: 109 VTERKPLMLITEYLRGGDLHKYLKEKGALSPST---AVNFALDIARGMAYLHNEPNVIIH 165
++ L L+ Y G L L P + A A G+ +LH N IH
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE--NHHIH 147
Query: 166 RDLKPRNVLLVNSSADHLKVGDFGLSKLI-KVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
RD+K N+LL A K+ DFGL++ K ++ G T Y APE + +
Sbjct: 148 RDIKSANILL--DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA---YXAPEALRG-E 201
Query: 225 YDKKVDVFSFAMILYEMLEGEPPL 248
K D++SF ++L E++ G P +
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLPAV 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 26 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 79
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 80 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 139
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 140 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 192
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 193 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 75
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 136 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 188
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 20 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 76
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 134
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 135 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 183
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 28 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 81
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 141
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 142 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 194
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 195 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 16 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 130
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN ++ LK+ DFGL++ H
Sbjct: 131 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDSE-LKILDFGLAR-------HTDD 179
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 34 DWEIDPSELD-FSSSAIIGKGSFGEI-------LKAYWRGTPVAIKRILPSLSDDRLVIQ 85
D +DP + + +GKG F + K + G V +L +++
Sbjct: 17 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST- 75
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
E+ + L +P++V F G + + ++ E R L + K + A++ A F
Sbjct: 76 ----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 131
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+G+ YLHN N +IHRDLK N+ L N D +K+GDFGL+ I+ D +
Sbjct: 132 MRQTIQGVQYLHN--NRVIHRDLKLGNLFL-NDDMD-VKIGDFGLATKIEF----DGERK 183
Query: 206 TGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
G+ Y+APEV + + +VD++S ILY +L G+PP E Y+
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--YIRIKKN 241
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDIL 299
+ + P L + AD RPS ++L
Sbjct: 242 EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 21 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 74
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 75 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 134
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 135 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 187
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 188 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 16 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 130
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 131 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 179
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 20 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 73
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 134 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 186
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 26 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 140
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 141 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 189
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 20 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 134
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN ++ LK+ DFGL++ H
Sbjct: 135 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDSE-LKILDFGLAR-------HTDD 183
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 20 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 77 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 134
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 135 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 183
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 36 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 89
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 150 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 202
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 203 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 26 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 83 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 140
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 141 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 189
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 16 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 130
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 131 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 179
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 19 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 133
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 134 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 182
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDXE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 21 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 78 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 135
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 136 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 184
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 37 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 94 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 151
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 152 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 200
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 201 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 11 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 68 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 125
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 126 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 174
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 25 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 82 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 139
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 140 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 188
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 19 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 133
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 134 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 182
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 13 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 69
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 70 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 127
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 128 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 176
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S IG G++G + A+ G VA+K++ + +R
Sbjct: 19 NKTIWEVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 133
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 134 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDXE-LKILDFGLAR-------HTDD 182
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 17 GSHF--EXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKR 72
GSH E NK WE+ + S +G G++G + A+ G VA+K+
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKK 74
Query: 73 ILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDL 127
+ + +R E+ LL ++H N++ L T + L + + +L G DL
Sbjct: 75 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ D
Sbjct: 134 NNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILD 188
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
FGL++ H +MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 189 FGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 16 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 73 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 130
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 131 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 179
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 24/235 (10%)
Query: 18 SHFEXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILP 75
SH E NK WE+ + + + +G G++G + +Y G +A+K++
Sbjct: 30 SHKERPTFYRQELNKTIWEVPER---YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR 86
Query: 76 SLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKY 130
+ +R E+ LL ++H N++ L T L + + +L G DL+
Sbjct: 87 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNI 145
Query: 131 LKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGL 190
+K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL
Sbjct: 146 VKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGL 200
Query: 191 SKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
++ H +MTG + Y APE+ + Y+ VD++S I+ E+L G
Sbjct: 201 AR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 17 GSHF--EXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKR 72
GSH E NK WE+ + S +G G++G + A+ G VA+K+
Sbjct: 17 GSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKK 73
Query: 73 ILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDL 127
+ + +R E+ LL ++H N++ L T + L + + +L G DL
Sbjct: 74 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 132
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ D
Sbjct: 133 NNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILD 187
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
FGL++ H +MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 188 FGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 10 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 66
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 124
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 125 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 173
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 75
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 136 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 188
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 12 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 68
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 69 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 126
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 127 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 175
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 66 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 119
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 180 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 232
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 233 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 20 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 73
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 134 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTEPCYTPYYVAP 186
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 11 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 68 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 125
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 126 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 174
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 10 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 124
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 125 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 173
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 72 TSQVLGLGINGKVLQIFNKRT--QEKFALKMLQD----CPKARREVELHWRASQCPHIVR 125
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 126 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 185
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 186 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 238
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D++S +I+Y +L G PP
Sbjct: 239 EVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 17 GSHF--EXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKR 72
GSH E NK WE+ + S +G G++G + A+ G VA+K+
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 73 ILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDL 127
+ + +R E+ LL ++H N++ L T + L + + +L G DL
Sbjct: 75 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ D
Sbjct: 134 NNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILD 188
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
FGL++ H +MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 189 FGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 34 DWEIDPSELD-FSSSAIIGKGSFGEI-------LKAYWRGTPVAIKRILPSLSDDRLVIQ 85
D +DP + + +GKG F + K + G V +L +++
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST- 91
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
E+ + L +P++V F G + + ++ E R L + K + A++ A F
Sbjct: 92 ----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+G+ YLHN N +IHRDLK N+ L N D +K+GDFGL+ I+ D +
Sbjct: 148 MRQTIQGVQYLHN--NRVIHRDLKLGNLFL-NDDMD-VKIGDFGLATKIEF----DGERK 199
Query: 206 TGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
G+ Y+APEV + + +VD++S ILY +L G+PP E Y+
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--YIRIKKN 257
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDIL 299
+ + P L + AD RPS ++L
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 34 DWEIDPSELD-FSSSAIIGKGSFGEI-------LKAYWRGTPVAIKRILPSLSDDRLVIQ 85
D +DP + + +GKG F + K + G V +L +++
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST- 91
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
E+ + L +P++V F G + + ++ E R L + K + A++ A F
Sbjct: 92 ----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+G+ YLHN N +IHRDLK N+ L N D +K+GDFGL+ I+ D +
Sbjct: 148 MRQTIQGVQYLHN--NRVIHRDLKLGNLFL-NDDMD-VKIGDFGLATKIEF----DGERK 199
Query: 206 TGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
G+ Y+APEV + + +VD++S ILY +L G+PP E Y+
Sbjct: 200 KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--YIRIKKN 257
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDIL 299
+ + P L + AD RPS ++L
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 17 GSHF--EXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKR 72
GSH E NK WE+ + S +G G++G + A+ G VA+K+
Sbjct: 17 GSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKK 73
Query: 73 ILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDL 127
+ + +R E+ LL ++H N++ L T + L + + +L G DL
Sbjct: 74 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 132
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ D
Sbjct: 133 NNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILD 187
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
FGL++ H +MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 188 FGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 23/274 (8%)
Query: 34 DWEIDPSELD-FSSSAIIGKGSFGEI-------LKAYWRGTPVAIKRILPSLSDDRLVIQ 85
D +DP + + +GKG F + K + G V +L +++
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST- 91
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
E+ + L +P++V F G + + ++ E R L + K + A++ A F
Sbjct: 92 ----EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+G+ YLHN N +IHRDLK N+ L N D +K+GDFGL+ I+ D +
Sbjct: 148 MRQTIQGVQYLHN--NRVIHRDLKLGNLFL-NDDMD-VKIGDFGLATKIEF----DGERK 199
Query: 206 TGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHR 265
G+ Y+APEV + + +VD++S ILY +L G+PP E Y+
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--YIRIKKN 257
Query: 266 PFFRAKGFTPELRELTEKCWAADMNQRPSFLDIL 299
+ + P L + AD RPS ++L
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 27/265 (10%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH---PNIVQ 104
+G+G++G E ++ G +A+KRI +++ + R ++L + +R P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ----EQKRLLMDLDISMRTVDCPFTVT 114
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKE---KGALSPSTAVN-FALDIARGMAYLHNEP 160
F GA+ + + E L L K+ K+ KG P + A+ I + + +LH++
Sbjct: 115 FYGALFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV- 219
+VI HRD+KP NVL+ ++ +K+ DFG+S + D T + G YMAPE
Sbjct: 174 SVI-HRDVKPSNVLI--NALGQVKMCDFGISGYLV-----DSVAKTIDAGCKPYMAPERI 225
Query: 220 ---FKHRKYDKKVDVFSFAMILYEMLEGEPPLANY-EPYEAAKYVAEGHRPFFRAKGFTP 275
+ Y K D++S + + E+ P ++ P++ K V E P A F+
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA 285
Query: 276 ELRELTEKCWAADMNQRPSFLDILK 300
E + T +C + +RP++ ++++
Sbjct: 286 EFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 25 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 82 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 139
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 140 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDXE-LKILDFGLAR-------HTDD 188
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 23/266 (8%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
LDF ++G+G FGE+ + T A K++ R Q E +L K+
Sbjct: 188 LDFR---VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYL----KEKGALSPSTAVNFALDIARGMAY 155
IV A + L L+ + GGD+ ++ ++ A+ + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH II+RDLKP NVLL + ++++ D GL+ +K + K G G+ +M
Sbjct: 305 LHQRN--IIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT----KTKGYAGTPGFM 356
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL----ANYEPYEAAKYVAEGHRPFFRAK 271
APE+ +YD VD F+ + LYEM+ P E E + V E +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY--PD 414
Query: 272 GFTPELRELTEKCWAADMNQRPSFLD 297
F+P ++ E D +R F D
Sbjct: 415 KFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 19 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 76 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 133
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 134 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDXE-LKILDFGLAR-------HTDD 182
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 23/266 (8%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
LDF ++G+G FGE+ + T A K++ R Q E +L K+
Sbjct: 188 LDFR---VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYL----KEKGALSPSTAVNFALDIARGMAY 155
IV A + L L+ + GGD+ ++ ++ A+ + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH II+RDLKP NVLL + ++++ D GL+ +K + K G G+ +M
Sbjct: 305 LHQRN--IIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT----KTKGYAGTPGFM 356
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL----ANYEPYEAAKYVAEGHRPFFRAK 271
APE+ +YD VD F+ + LYEM+ P E E + V E +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY--PD 414
Query: 272 GFTPELRELTEKCWAADMNQRPSFLD 297
F+P ++ E D +R F D
Sbjct: 415 KFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 23/266 (8%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
LDF ++G+G FGE+ + T A K++ R Q E +L K+
Sbjct: 188 LDFR---VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYL----KEKGALSPSTAVNFALDIARGMAY 155
IV A + L L+ + GGD+ ++ ++ A+ + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH II+RDLKP NVLL + ++++ D GL+ +K + K G G+ +M
Sbjct: 305 LHQRN--IIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT----KTKGYAGTPGFM 356
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL----ANYEPYEAAKYVAEGHRPFFRAK 271
APE+ +YD VD F+ + LYEM+ P E E + V E +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY--PD 414
Query: 272 GFTPELRELTEKCWAADMNQRPSFLD 297
F+P ++ E D +R F D
Sbjct: 415 KFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 23/266 (8%)
Query: 42 LDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH 99
LDF ++G+G FGE+ + T A K++ R Q E +L K+
Sbjct: 188 LDFR---VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYL----KEKGALSPSTAVNFALDIARGMAY 155
IV A + L L+ + GGD+ ++ ++ A+ + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH II+RDLKP NVLL + ++++ D GL+ +K + K G G+ +M
Sbjct: 305 LHQRN--IIYRDLKPENVLLDDDG--NVRISDLGLAVELKAGQT----KTKGYAGTPGFM 356
Query: 216 APEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL----ANYEPYEAAKYVAEGHRPFFRAK 271
APE+ +YD VD F+ + LYEM+ P E E + V E +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY--PD 414
Query: 272 GFTPELRELTEKCWAADMNQRPSFLD 297
F+P ++ E D +R F D
Sbjct: 415 KFSPASKDFCEALLQKDPEKRLGFRD 440
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 66 TSQVLGLGINGKVLQIFNKRT--QEKFALKXLQD----CPKARREVELHWRASQCPHIVR 119
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 120 IVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS 179
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K NS +T + Y+AP
Sbjct: 180 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-----LTTPCYTPYYVAP 232
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
EV KYDK D +S +I Y +L G PP
Sbjct: 233 EVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 37 IDPSEL-DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNL 93
+DP L DF +IG+GS+ ++L + T A+K + L +D I + E ++
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 94 LVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARG 152
+ HP +V L + EY+ GGDL +++ + L A ++ +I+
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 153 MAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGS 211
+ YLH II+RDLK NVLL S H+K+ D+G+ K ++ ++ + G+
Sbjct: 123 LNYLHERG--IIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGT 173
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
Y+APE+ + Y VD ++ ++++EM+ G P
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 13 YGQNGSHFEXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAI 70
Y Q+ + E NK WE+ + S +G G++G + A+ G VA+
Sbjct: 19 YFQSNASQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAV 75
Query: 71 KRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGG 125
K++ + +R E+ LL ++H N++ L T + L + + +L G
Sbjct: 76 KKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 134
Query: 126 DLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKV 185
DL+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+
Sbjct: 135 DLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKI 189
Query: 186 GDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
DFGL++ H +M G + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 190 LDFGLAR-------HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
DF +IG+GS+ ++L + T A+K + L +D I + E ++ + H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
P +V L + EY+ GGDL +++ + L A ++ +I+ + YLH
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 140
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRYMAPE 218
II+RDLK NVLL S H+K+ D+G+ K ++ ++ + G+ Y+APE
Sbjct: 141 G--IIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGTPNYIAPE 191
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + Y VD ++ ++++EM+ G P
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 122 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 173
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 123 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 174
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+ +I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+ +I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y AP
Sbjct: 120 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWYRAP 171
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ D+GL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDYGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 120 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 171
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
DF +IG+GS+ ++L + T A+K + L +D I + E ++ + H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
P +V L + EY+ GGDL +++ + L A ++ +I+ + YLH
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 125
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRYMAPE 218
II+RDLK NVLL S H+K+ D+G+ K ++ ++ + G+ Y+APE
Sbjct: 126 G--IIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSXF-----CGTPNYIAPE 176
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + Y VD ++ ++++EM+ G P
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 66
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 125 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 176
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 124 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 175
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 123 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 174
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 124 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 175
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 122 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 173
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 120 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 171
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 121 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 172
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKL-RH 99
DF +IG+GS+ ++L + T A++ + L +D I + E ++ + H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 100 PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE 159
P +V L + EY+ GGDL +++ + L A ++ +I+ + YLH
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKL-IKVQNSHDVYKMTGETGSYRYMAPE 218
II+RDLK NVLL S H+K+ D+G+ K ++ ++ + G+ Y+APE
Sbjct: 173 G--IIYRDLKLDNVLL--DSEGHIKLTDYGMCKEGLRPGDTTSTF-----CGTPNYIAPE 223
Query: 219 VFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ + Y VD ++ ++++EM+ G P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +++G+G++G + A + G VAIK+I P D L E+ +L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHE 69
Query: 101 NIVQFLGAVT----ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYL 156
NI+ E + I + L DLH+ + + LS F R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI---KVQNSHDVYKMTGET---G 210
H + +IHRDLKP N LL+NS+ D LKV DFGL+++I NS + +G T
Sbjct: 129 HG--SNVIHRDLKPSN-LLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 211 SYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV KY + +DV+S IL E+ P
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +++G+G++G + A + G VAIK+I P D L E+ +L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHE 69
Query: 101 NIVQFLGAVT----ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYL 156
NI+ E + I + L DLH+ + + LS F R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI---KVQNSHDVYKMTGET---G 210
H + +IHRDLKP N LL+NS+ D LKV DFGL+++I NS + +G T
Sbjct: 129 HG--SNVIHRDLKPSN-LLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 211 SYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV KY + +DV+S IL E+ P
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR--- 98
+ A IG G++G + KA G VA+K + ++ L I R EV LL +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 99 HPNIVQFLGAV----TERK-PLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
HPN+V+ + T+R+ + L+ E++ DL YL + L T + R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
G+ +LH N I+HRDLKP N+L+ +S +K+ DFGL+++ Q + D +T
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMALDPVVVT----- 174
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
Y APEV Y VD++S I EM +P
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 112/238 (47%), Gaps = 26/238 (10%)
Query: 17 GSHF--EXXXXXXXXXNKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKR 72
GSH E NK WE+ + S +G G++G + A+ G VA+K+
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKK 74
Query: 73 ILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDL 127
+ + +R E+ LL ++H N++ L T + L + + +L G DL
Sbjct: 75 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 133
Query: 128 HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGD 187
+ +K + L+ I RG+ Y+H+ IIHRDLKP N L VN + LK+ D
Sbjct: 134 NNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILD 188
Query: 188 FGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
FGL++ H +M G + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 189 FGLAR-------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 123 S--HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 174
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 122 S--HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 173
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 63
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 122 S--HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 173
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 124 S--HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 175
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 119/256 (46%), Gaps = 15/256 (5%)
Query: 50 IGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G G+FG + + + T K I D+ + ++E++++ +L HP ++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHPKLINLHD 115
Query: 108 AVTERKPLMLITEYLRGGDL-HKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHR 166
A ++ ++LI E+L GG+L + E +S + +N+ G+ ++H + I+H
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE--HSIVHL 173
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYD 226
D+KP N++ A +K+ DFGL+ + N ++ K+T T + + APE+
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKL---NPDEIVKVT--TATAEFAAPEIVDREPVG 228
Query: 227 KKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRA--KGFTPELRELTEKC 284
D+++ ++ Y +L G P A + E + V F +PE ++ +
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNL 288
Query: 285 WAADMNQRPSFLDILK 300
+ +R + D L+
Sbjct: 289 LQKEPRKRLTVHDALE 304
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 23/209 (11%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 61
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAV------NFALDIARGMA 154
NIV+ L + L L+ E+ +H+ LK S T + ++ + +G+A
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH-----VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+ H+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V T E + Y
Sbjct: 117 FCHS--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYTHEVVTLWY 168
Query: 215 MAPEVFKHRK-YDKKVDVFSFAMILYEML 242
APE+ K Y VD++S I EM+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 126/296 (42%), Gaps = 64/296 (21%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNL--LVKLRHPNIVQFL 106
+IG+G +G + K PVA+K + S ++ Q+F +E N+ + + H NI +F+
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVK--VFSFANR----QNFINEKNIYRVPLMEHDNIARFI 73
Query: 107 GA---VTE--RKPLMLITEYLRGGDLHKYLKEKGALSPS---TAVNFALDIARGMAYLHN 158
VT R +L+ EY G L KYL +L S ++ A + RG+AYLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHT 129
Query: 159 E-------PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIK----VQNSHDVYKMTG 207
E I HRDL RNVL+ N + DFGLS + V+ +
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGT--CVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 208 ETGSYRYMAPEVFK-------HRKYDKKVDVFSFAMILYEMLEGEP---PLANYEPYEAA 257
E G+ RYMAPEV + K+VD+++ +I +E+ P + Y+ A
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
Query: 258 KYVAEGHRPFF----------RAKGFTPE-----------LRELTEKCWAADMNQR 292
G+ P F + + PE L+E E CW D R
Sbjct: 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 10 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 67 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 124
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 125 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 173
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+M G + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 32 KCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRH 89
K WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 11 KTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR- 66
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVN 144
E+ LL ++H N++ L T + L + + +L G DL+ +K L+
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CAKLTDDHVQF 125
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H +
Sbjct: 126 LIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDDE 174
Query: 205 MTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 50 IGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G++ + K + T VA+K I L + EV+LL L+H NIV
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI--RLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVN-FALDIARGMAYLHNEPNVIIHR 166
+ K L L+ EYL DL +YL + G + V F + RG+AY H + ++HR
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHR 124
Query: 167 DLKPRNVLLVNSSADHLKVGDFGLSKLIKV-QNSHDVYKMTGETGSYRYMAPEV-FKHRK 224
DLKP+N LL+N + LK+ DFGL++ + ++D E + Y P++
Sbjct: 125 DLKPQN-LLINERGE-LKLADFGLARAKSIPTKTYD-----NEVVTLWYRPPDILLGSTD 177
Query: 225 YDKKVDVFSFAMILYEMLEGEP 246
Y ++D++ I YEM G P
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRP 199
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+M G + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 62
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAV------NFALDIARGMA 154
NIV+ L + L L+ E+ LH+ LK+ S T + ++ + +G+A
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+ H+ + ++HRDLKP N+L+ A +K+ DFGL++ V V E + Y
Sbjct: 118 FCHS--HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWY 169
Query: 215 MAPEVFKHRK-YDKKVDVFSFAMILYEML 242
APE+ K Y VD++S I EM+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+M G + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 41 ELDFSSSAIIGKGSFGEIL-KAYWRGTPVAIKRILP---SLSDDRLVIQDFRHEVNLLVK 96
++ F ++G G+ G I+ + + VA+KRILP S +D EV LL +
Sbjct: 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---------REVQLLRE 73
Query: 97 L-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG----ALSPSTAVNFALDIAR 151
HPN++++ +R+ I L L +Y+++K L P T +
Sbjct: 74 SDEHPNVIRYFCTEKDRQ-FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ---QTTS 129
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLK----VGDFGLSKLIKVQNSHDVYKMTG 207
G+A+LH+ I+HRDLKP N+L+ +A H K + DFGL K + V H + +G
Sbjct: 130 GLAHLHSLN--IVHRDLKPHNILISMPNA-HGKIKAMISDFGLCKKLAV-GRHSFSRRSG 185
Query: 208 ETGSYRYMAPEVFKHRKYDK---KVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVAEG 263
G+ ++APE+ + VD+FS + Y ++ EG P +A +
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGAC 245
Query: 264 HRPFFRAKGFTPEL-RELTEKCWAADMNQRPSFLDILK 300
+ + REL EK A D +RPS +LK
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G++G + A R G VAIK+I P+ D + E+ +L +H NI+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ P + + L DLH+ + L+ F + RG+ Y+H+
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS--AQ 179
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV-FK 221
+IHRDLKP N LLVN + + LK+GDFG+++ + + Y MT + Y APE+
Sbjct: 180 VIHRDLKPSN-LLVNENCE-LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 222 HRKYDKKVDVFSFAMILYEML 242
+Y + +D++S I EML
Sbjct: 238 LHEYTQAIDLWSVGCIFGEML 258
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G++G + A R G VAIK+I P+ D + E+ +L +H NI+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ P + + L DLH+ + L+ F + RG+ Y+H+
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ-- 178
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV-FK 221
+IHRDLKP N LLVN + + LK+GDFG+++ + + Y MT + Y APE+
Sbjct: 179 VIHRDLKPSN-LLVNENCE-LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 222 HRKYDKKVDVFSFAMILYEML 242
+Y + +D++S I EML
Sbjct: 237 LHEYTQAIDLWSVGCIFGEML 257
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 32/221 (14%)
Query: 43 DFSSSAIIGKGSFGEI-LKAYWRGTPVAIKRILPSL-----SDDRLVIQDFRHEVNLLVK 96
D+ +IG+G+FGE+ L + V ++L SD F E +++
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAF 131
Query: 97 LRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLK-----EKGALSPSTAVNFALDIAR 151
P +VQ A + K L ++ EY+ GGDL + EK A + V ALD
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
M +IHRD+KP N+LL HLK+ DFG +K+ + V+ T G+
Sbjct: 192 SMG--------LIHRDVKPDNMLL--DKHGHLKLADFG--TCMKMDETGMVHCDTA-VGT 238
Query: 212 YRYMAPEVFKHRK----YDKKVDVFSFAMILYEMLEGEPPL 248
Y++PEV K + Y ++ D +S + L+EML G+ P
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 41/230 (17%)
Query: 43 DFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF A++G+G+FG+++KA AIK+I + ++ EV LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVMLLASLNHQ 62
Query: 101 NIVQFLGAVTERK-------------PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL 147
+V++ A ER+ L + EY G L+ + + L+ + L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRL 121
Query: 148 --DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK- 204
I ++Y+H++ IIHRDLKP N+ + S ++K+GDFGL+K V S D+ K
Sbjct: 122 FRQILEALSYIHSQG--IIHRDLKPMNIFIDESR--NVKIGDFGLAK--NVHRSLDILKL 175
Query: 205 -----------MTGETGSYRYMAPEVFKHR-KYDKKVDVFSFAMILYEML 242
+T G+ Y+A EV Y++K+D++S +I +EM+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 41 ELD-FSSSAIIGKGSFGEIL--KAYWRGTPVAIKRIL--PSLSDDRL-VIQDFRHEVNLL 94
E+D F + G+G+FG + K G VAIK+++ P + L ++QD L
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD-------L 73
Query: 95 VKLRHPNIVQF------LGAVTERKP-LMLITEYLRGGDLHK----YLKEKGALSPSTAV 143
L HPNIVQ LG R L ++ EY+ LH+ Y + + A P
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPPPILIK 132
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
F + R + LH + HRD+KP NV LVN + LK+ DFG +K + + Y
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNV-LVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 204 KMTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
S Y APE +F ++ Y VD++S I EM+ GEP
Sbjct: 192 -----ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAV------NFALDIARGMA 154
NIV+ L + L L+ E+ LH+ LK S T + ++ + +G+A
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
+ H+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y
Sbjct: 121 FCHS--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWY 172
Query: 215 MAPEVFKHRK-YDKKVDVFSFAMILYEML 242
APE+ K Y VD++S I EM+
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ FGL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILGFGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +++G+G++G + A + G VAIK+I P D L E+ +L +H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHE 69
Query: 101 NIVQFLGAVT----ERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYL 156
NI+ E + I + L DLH+ + + LS F R + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVL 128
Query: 157 HNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE-------T 209
H + +IHRDLKP N LL+NS+ D LKV DFGL+++I +++ D + TG+
Sbjct: 129 HG--SNVIHRDLKPSN-LLINSNCD-LKVCDFGLARIID-ESAADNSEPTGQQSGMVEFV 183
Query: 210 GSYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV KY + +DV+S IL E+ P
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 84 IQDFRH----EVNLLVKLR-HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS 138
+Q+ R EV++L K+ HPNI+Q L+ + ++ G+L YL EK LS
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 122
Query: 139 PSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQN 198
+ + LH I+HRDLKP N+LL + ++K+ DFG S +
Sbjct: 123 EKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGE 178
Query: 199 SHDVYKMTGETGSYRYMAPEVFK------HRKYDKKVDVFSFAMILYEMLEGEPPLANYE 252
K+ G+ Y+APE+ + H Y K+VD++S +I+Y +L G PP + +
Sbjct: 179 -----KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 253 PYEAAKYVAEGHRPF 267
+ + G+ F
Sbjct: 234 QMLMLRMIMSGNYQF 248
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L N + +K+GDFGL+ ++ +D +
Sbjct: 127 VLGCQYLHR--NRVIHRDLKLGNLFL-NEDLE-VKIGDFGLATKVE----YDGERKKTLC 178
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 236
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ D GL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDAGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L N + +K+GDFGL+ ++ +D +
Sbjct: 127 VLGCQYLHR--NRVIHRDLKLGNLFL-NEDLE-VKIGDFGLATKVE----YDGERKKTLC 178
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 179 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 236
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E++ DL K++ + AL+ P + ++ + +G+A+ H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 124 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 175
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRIL---PSLSDDRLVIQDFRHEVNLLV 95
+LDF +G+G F + KA + T VAIK+I S + D + R E+ LL
Sbjct: 14 KLDF-----LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQ 67
Query: 96 KLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG-ALSPSTAVNFALDIARGMA 154
+L HPNI+ L A + + L+ +++ DL +K+ L+PS + L +G+
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 155 YLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
YLH + I+HRDLKP N+LL + LK+ DFGL+K N +++ + Y
Sbjct: 127 YLHQ--HWILHRDLKPNNLLLDENGV--LKLADFGLAKSFGSPNRAYXHQVV----TRWY 178
Query: 215 MAPE-VFKHRKYDKKVDVFSFAMILYEML 242
APE +F R Y VD+++ IL E+L
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L N + +K+GDFGL+ ++ +D +
Sbjct: 131 VLGCQYLHR--NRVIHRDLKLGNLFL-NEDLE-VKIGDFGLATKVE----YDGERKKTLC 182
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 183 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 240
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 241 PKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRI---LPSLSDDRLVIQ 85
NK WE+ P L +G G++G + AY VA+K++ SL R +
Sbjct: 20 NKTVWEV-PQRL--QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR 76
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPS 140
+ R LL L+H N++ L T + + + L G DL+ +K + ALS
Sbjct: 77 ELR----LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ-ALSDE 131
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+ RG+ Y+H+ IIHRDLKP NV VN ++ L++ DFGL++ +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNV-AVNEDSE-LRILDFGLARQADEE--- 184
Query: 201 DVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGE 245
MTG + Y APE+ + Y++ VD++S I+ E+L+G+
Sbjct: 185 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 46 SSAIIGKGSFGEIL-KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-HPNIV 103
S I+G GS G ++ + ++G PVA+KR+L D L+ E+ LL + HPN++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHPNVI 72
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS-------TAVNFALDIARGMAYL 156
++ + T + L + E L +L ++ K + ++ IA G+A+L
Sbjct: 73 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 157 HNEPNVIIHRDLKPRNVLLVNSS---------ADHLK--VGDFGLSKLIKVQNSHDVYKM 205
H+ IIHRDLKP+N+L+ SS A++L+ + DFGL K + S +
Sbjct: 132 HSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 206 TGETGSYRYMAPEVFKH-------RKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAA 257
+G+ + APE+ + R+ + +D+FS + Y +L +G+ P + Y
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRE 247
Query: 258 KYVAEG-----HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+ G + E +L + D +RP+ + +L+
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ D GL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDRGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ D GL++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDGGLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 84 IQDFRH----EVNLLVKLR-HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS 138
+Q+ R EV++L K+ HPNI+Q L+ + ++ G+L YL EK LS
Sbjct: 50 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 109
Query: 139 PSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQN 198
+ + LH I+HRDLKP N+LL + ++K+ DFG S +
Sbjct: 110 EKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGE 165
Query: 199 SHDVYKMTGETGSYRYMAPEVFK------HRKYDKKVDVFSFAMILYEMLEGEPPLANYE 252
K+ G+ Y+APE+ + H Y K+VD++S +I+Y +L G PP + +
Sbjct: 166 -----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 253 PYEAAKYVAEGHRPF 267
+ + G+ F
Sbjct: 221 QMLMLRMIMSGNYQF 235
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L N + +K+GDFGL+ ++ +D +
Sbjct: 125 VLGCQYLHR--NRVIHRDLKLGNLFL-NEDLE-VKIGDFGLATKVE----YDGERKKVLC 176
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 234
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 235 PKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 64
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL ++ + AL+ P + ++ + +G+A+ H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 123 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 174
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 87 FRHEVNLLVKLR-HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
FR EV +L + + H N+++ + E L+ E +RGG + ++ ++ + A
Sbjct: 58 FR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSH---D 201
D+A + +LHN+ I HRDLKP N+L + + +K+ DFGL IK+
Sbjct: 117 VQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 202 VYKMTGETGSYRYMAPEVFKHRK-----YDKKVDVFSFAMILYEMLEGEPPLAN 250
++ GS YMAPEV + YDK+ D++S +ILY +L G PP
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
+F IG+G++G + KA + G VA+K+I + + R E++LL +L HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHP 65
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS--PSTAV-NFALDIARGMAYLH 157
NIV+ L + L L+ E+L DL ++ + AL+ P + ++ + +G+A+ H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ + ++HRDLKP+N+L+ A +K+ DFGL++ V V E + Y AP
Sbjct: 124 S--HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVP----VRTYXHEVVTLWYRAP 175
Query: 218 EVFKHRK-YDKKVDVFSFAMILYEML 242
E+ K Y VD++S I EM+
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + S +G G++G + A+ G VA+K++ + +R
Sbjct: 14 NKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAV 143
E+ LL ++H N++ L T + L + + +L G DL+ +K + L+
Sbjct: 71 -ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQ 128
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
I RG+ Y+H+ IIHRDLKP N L VN + LK+ DF L++ H
Sbjct: 129 FLIYQILRGLKYIHSAD--IIHRDLKPSN-LAVNEDCE-LKILDFYLAR-------HTDD 177
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEG 244
+MTG + Y APE+ + Y++ VD++S I+ E+L G
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 84 IQDFRH----EVNLLVKLR-HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALS 138
+Q+ R EV++L K+ HPNI+Q L+ + ++ G+L YL EK LS
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS 122
Query: 139 PSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQN 198
+ + LH I+HRDLKP N+LL + ++K+ DFG S +
Sbjct: 123 EKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGE 178
Query: 199 SHDVYKMTGETGSYRYMAPEVFK------HRKYDKKVDVFSFAMILYEMLEGEPPLANYE 252
K+ G+ Y+APE+ + H Y K+VD++S +I+Y +L G PP + +
Sbjct: 179 -----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 253 PYEAAKYVAEGHRPF 267
+ + G+ F
Sbjct: 234 QMLMLRMIMSGNYQF 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L + +K+GDFGL+ ++ +D +
Sbjct: 151 VLGCQYLHR--NRVIHRDLKLGNLFL--NEDLEVKIGDFGLATKVE----YDGERKKVLC 202
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 260
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 261 PKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 90 EVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDI 149
E+++ L H ++V F G + + ++ E R L + K + AL+ A + I
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 150 ARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGET 209
G YLH N +IHRDLK N+ L N + +K+GDFGL+ ++ +D +
Sbjct: 149 VLGCQYLHR--NRVIHRDLKLGNLFL-NEDLE-VKIGDFGLATKVE----YDGERKKVLC 200
Query: 210 GSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
G+ Y+APEV + + +VDV+S I+Y +L G+PP E Y+ +
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--YLRIKKNEYSI 258
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDIL 299
K P L +K D RP+ ++L
Sbjct: 259 PKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 46 SSAIIGKGSFGEIL-KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-HPNIV 103
S I+G GS G ++ + ++G PVA+KR+L D L+ E+ LL + HPN++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHPNVI 90
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS-------TAVNFALDIARGMAYL 156
++ + T + L + E L +L ++ K + ++ IA G+A+L
Sbjct: 91 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 157 HNEPNVIIHRDLKPRNVLLVNSS---------ADHLK--VGDFGLSKLIKVQNSHDVYKM 205
H+ IIHRDLKP+N+L+ SS A++L+ + DFGL K + +
Sbjct: 150 HSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 206 TGETGSYRYMAPEVFKH---RKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVA 261
+G+ + APE+ + R+ + +D+FS + Y +L +G+ P + Y +
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNII 265
Query: 262 EG-----HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
G + E +L + D +RP+ + +L+
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF--------------LGAVTERK 113
VAIK+I+ L+D + V R E+ ++ +L H NIV+ +G++TE
Sbjct: 39 VAIKKIV--LTDPQSVKHALR-EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95
Query: 114 PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNV 173
+ ++ EY+ DL L E+G L A F + RG+ Y+H+ ++HRDLKP N
Sbjct: 96 SVYIVQEYMET-DLANVL-EQGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPAN- 150
Query: 174 LLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE-VFKHRKYDKKVDVF 232
L +N+ LK+GDFGL++++ SH + G + Y +P + Y K +D++
Sbjct: 151 LFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW-YRSPRLLLSPNNYTKAIDMW 209
Query: 233 SFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
+ I EML G+ A E + + E
Sbjct: 210 AAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 40/284 (14%)
Query: 46 SSAIIGKGSFGEIL-KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-HPNIV 103
S I+G GS G ++ + ++G PVA+KR+L D L+ E+ LL + HPN++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHPNVI 90
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS-------TAVNFALDIARGMAYL 156
++ + T + L + E L +L ++ K + ++ IA G+A+L
Sbjct: 91 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 157 HNEPNVIIHRDLKPRNVLLVNSS---------ADHLK--VGDFGLSKLIKVQNSHDVYKM 205
H+ IIHRDLKP+N+L+ SS A++L+ + DFGL K + +
Sbjct: 150 HSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 206 TGETGSYRYMAPEVFKH---RKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAAKYVA 261
+G+ + APE+ + R+ + +D+FS + Y +L +G+ P + Y +
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNII 265
Query: 262 EG-----HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
G + E +L + D +RP+ + +L+
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 110/226 (48%), Gaps = 30/226 (13%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRI---LPSLSDDRLVIQ 85
NK WE+ P L +G G++G + AY VA+K++ SL R +
Sbjct: 20 NKTVWEV-PQRL--QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR 76
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPS 140
+ R LL L+H N++ L T + + + L G DL+ +K + ALS
Sbjct: 77 ELR----LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ-ALSDE 131
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+ RG+ Y+H+ IIHRDLKP NV VN ++ L++ DFGL++ +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNV-AVNEDSE-LRILDFGLARQADEE--- 184
Query: 201 DVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGE 245
MTG + Y APE+ + Y++ VD++S I+ E+L+G+
Sbjct: 185 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 30/226 (13%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRI---LPSLSDDRLVIQ 85
NK WE+ P L +G G++G + AY VA+K++ SL R +
Sbjct: 12 NKTVWEV-PQRL--QGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR 68
Query: 86 DFRHEVNLLVKLRHPNIVQFLGAVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPS 140
+ R LL L+H N++ L T + + + L G DL+ +K + ALS
Sbjct: 69 ELR----LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ-ALSDE 123
Query: 141 TAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+ RG+ Y+H+ IIHRDLKP NV VN + L++ DFGL++ +
Sbjct: 124 HVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNV-AVNEDCE-LRILDFGLARQADEE--- 176
Query: 201 DVYKMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGE 245
MTG + Y APE+ + Y++ VD++S I+ E+L+G+
Sbjct: 177 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR--- 98
+ A IG G++G + KA G VA+K + ++ L I R EV LL +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 99 HPNIVQFLGAV----TERK-PLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
HPN+V+ + T+R+ + L+ E++ DL YL + L T + R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
G+ +LH N I+HRDLKP N+L+ +S +K+ DFGL+++ Q + + +
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMA-----LAPVVVT 174
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
Y APEV Y VD++S I EM +P
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 35/271 (12%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-------HP 100
IG+G++G + K + G +A+KRI ++ D + + LL+ L P
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--------DEKEQKQLLMDLDVVMRSSDCP 81
Query: 101 NIVQFLGAVTERKPLMLITEYLRGG--DLHKYLKEKGALSPSTAVNFALDIARGMAYLHN 158
IVQF GA+ + E + +KY+ + + +A A H
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 159 EPNV-IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
+ N+ IIHRD+KP N+LL S ++K+ DFG+S + D T + G YMAP
Sbjct: 142 KENLKIIHRDIKPSNILLDRSG--NIKLCDFGISGQLV-----DSIAKTRDAGCRPYMAP 194
Query: 218 EVF----KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEP-YEAAKYVAEGHRPFF---R 269
E + YD + DV+S + LYE+ G P + ++ V +G P
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254
Query: 270 AKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+ F+P C D ++RP + ++LK
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 13/164 (7%)
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
++++ +ARGM +L + IHRDL RN+LL S + +K+ DFGL++ I +N V
Sbjct: 202 ISYSFQVARGMEFLSSRK--CIHRDLAARNILL--SENNVVKICDFGLARDI-YKNPDYV 256
Query: 203 YKMTGETG-SYRYMAPEVFKHRKYDKKVDVFSFAMILYEM--LEGEPPLANYEPYEAAKY 259
K G+T ++MAPE + Y K DV+S+ ++L+E+ L G P +
Sbjct: 257 RK--GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR 314
Query: 260 VAEGHRPFFRAKGF-TPELRELTEKCWAADMNQRPSFLDILKRL 302
+ EG R RA + TPE+ ++ CW D +RP F +++++L
Sbjct: 315 LREGMR--MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRILPSLSDDRLVIQDF 87
WE L S +G+G+FG++++A G VA+K + + +
Sbjct: 22 WEFARERLKLGKS--LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEY--KAL 77
Query: 88 RHEVNLLVKL-RHPNIVQFLGAVTERK-PLMLITEYLRGGDLHKYLKEKGAL 137
E+ +L + H N+V LGA T++ PLM+I EY + G+L YLK K L
Sbjct: 78 MTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 44/288 (15%)
Query: 46 SSAIIGKGSFGEIL-KAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-HPNIV 103
S I+G GS G ++ + ++G PVA+KR+L D L+ E+ LL + HPN++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHPNVI 72
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPS-------TAVNFALDIARGMAYL 156
++ + T + L + E L +L ++ K + ++ IA G+A+L
Sbjct: 73 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 157 HNEPNVIIHRDLKPRNVLLVNSS---------ADHLK--VGDFGLSKLIKVQNSHDVYKM 205
H+ IIHRDLKP+N+L+ SS A++L+ + DFGL K + +
Sbjct: 132 HSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 206 TGETGSYRYMAPEVFKH-------RKYDKKVDVFSFAMILYEML-EGEPPLANYEPYEAA 257
+G+ + APE+ + R+ + +D+FS + Y +L +G+ P + Y
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRE 247
Query: 258 KYVAEG-----HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDILK 300
+ G + E +L + D +RP+ + +L+
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR--- 98
+ A IG G++G + KA G VA+K + ++ L I R EV LL +L
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAFE 64
Query: 99 HPNIVQFLGAV----TERK-PLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIAR 151
HPN+V+ + T+R+ + L+ E++ DL YL + L T + R
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 152 GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGS 211
G+ +LH N I+HRDLKP N+L+ +S +K+ DFGL+++ Q + + +
Sbjct: 124 GLDFLHA--NCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMA-----LFPVVVT 174
Query: 212 YRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
Y APEV Y VD++S I EM +P
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 24/223 (10%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFR 88
K WE+ D +G G++G + A G VAIK++ + + +R
Sbjct: 17 TKTAWEVRAVYRDLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR 73
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEY-----LRGGDLHKYLKEKGALSPSTAV 143
E+ LL +RH N++ L T + L T++ G DL K +K + L
Sbjct: 74 -ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE-KLGEDRIQ 131
Query: 144 NFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY 203
+ +G+ Y+H IIHRDLKP N L VN + LK+ DFGL++ +
Sbjct: 132 FLVYQMLKGLRYIHAAG--IIHRDLKPGN-LAVNEDCE-LKILDFGLARQADSE------ 181
Query: 204 KMTGETGSYRYMAPEVFKH-RKYDKKVDVFSFAMILYEMLEGE 245
M G + Y APEV + +Y + VD++S I+ EM+ G+
Sbjct: 182 -MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 30/220 (13%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLR-HPNIVQFL 106
+GKG++G + K+ R G VA+K+I + + + FR E+ +L +L H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 107 GAV--TERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ + + L+ +Y+ DLH ++ L P + + + YLH+ ++
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIR-ANILEPVHKQYVVYQLIKVIKYLHSGG--LL 131
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSK----LIKVQNS-------------HDVYKMTG 207
HRD+KP N+LL ++ H+KV DFGLS+ + +V N+ D +T
Sbjct: 132 HRDMKPSNILL--NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 208 ETGSYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APE+ KY K +D++S IL E+L G+P
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 100
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 161 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 216
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 217 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 41/230 (17%)
Query: 43 DFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF A++G+G+FG+++KA AIK+I + ++ EV LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVMLLASLNHQ 62
Query: 101 NIVQFLGAVTERK-------------PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL 147
+V++ A ER+ L + EY L+ + + L+ + L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN-LNQQRDEYWRL 121
Query: 148 --DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK- 204
I ++Y+H++ IIHRDLKP N+ + S ++K+GDFGL+K V S D+ K
Sbjct: 122 FRQILEALSYIHSQG--IIHRDLKPMNIFIDESR--NVKIGDFGLAK--NVHRSLDILKL 175
Query: 205 -----------MTGETGSYRYMAPEVFKHR-KYDKKVDVFSFAMILYEML 242
+T G+ Y+A EV Y++K+D++S +I +EM+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL++ + D
Sbjct: 196 ICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLAR--DIYKDPDY 249
Query: 203 YKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYE-PYEAAKYV 260
+ ++MAPE R Y + DV+SF ++L+E+ G P + E + +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 261 AEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 310 KEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 17 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 75 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 20/256 (7%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDF---RHEVNLLVKLRHPNIVQ 104
IG G F ++ A G VAIK + D + D + E+ L LRH +I Q
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-----IMDKNTLGSDLPRIKTEIEALKNLRHQHICQ 72
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVII 164
+ + ++ EY GG+L Y+ + LS I +AY+H++
Sbjct: 73 LYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA-- 130
Query: 165 HRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRK 224
HRDLKP N+L LK+ DFGL K + + D Y + GS Y APE+ + +
Sbjct: 131 HRDLKPENLLF--DEYHKLKLIDFGLCA--KPKGNKD-YHLQTCCGSLAYAAPELIQGKS 185
Query: 225 Y-DKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEK 283
Y + DV+S ++LY ++ G P + K + G + K +P L ++
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG--KYDVPKWLSPSSILLLQQ 243
Query: 284 CWAADMNQRPSFLDIL 299
D +R S ++L
Sbjct: 244 MLQVDPKKRISMKNLL 259
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + + S +G G++G + A + G VAIK++ + + +R
Sbjct: 16 NKTAWELPKT---YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR 72
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL------MLITEYLRGGDLHKYLKEKGALSPSTA 142
E+ LL ++H N++ L T L L+ +++ DL K + K S
Sbjct: 73 -ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLK--FSEEKI 128
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ +G+ Y+H+ ++HRDLKP N L VN + LK+ DFGL++ H
Sbjct: 129 QYLVYQMLKGLKYIHSAG--VVHRDLKPGN-LAVNEDCE-LKILDFGLAR-------HAD 177
Query: 203 YKMTGETGSYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGE 245
+MTG + Y APEV Y++ VD++S I+ EML G+
Sbjct: 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL++ + D
Sbjct: 194 ICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLAR--DIYKDPDY 247
Query: 203 YKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYE-PYEAAKYV 260
+ ++MAPE R Y + DV+SF ++L+E+ G P + E + +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 261 AEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 308 KEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 15 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 72
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 73 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 78
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 139 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 194
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 195 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL++ + D
Sbjct: 201 ICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLAR--DIYKDPDY 254
Query: 203 YKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYE-PYEAAKYV 260
+ ++MAPE R Y + DV+SF ++L+E+ G P + E + +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 261 AEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 315 KEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKA---------YWRGTPVAIKRILPSLSDDRLVIQ 85
WE L +G+G+FG++++A R V + + + S+ R ++
Sbjct: 22 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 80 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 78
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 79 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 139 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 194
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 195 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 36 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 85
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 86 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 146 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 201
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 202 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ ++ +A+GM +L + IHRDL RN+LL S + +K+ DFGL++ + D
Sbjct: 203 ICYSFQVAKGMEFLASRK--CIHRDLAARNILL--SEKNVVKICDFGLAR--DIYKDPDY 256
Query: 203 YKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLE-GEPPLANYE-PYEAAKYV 260
+ ++MAPE R Y + DV+SF ++L+E+ G P + E + +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 261 AEGHRPFFRAKGFT-PELRELTEKCWAADMNQRPSFLDILKRL 302
EG R RA +T PE+ + CW + +QRP+F ++++ L
Sbjct: 317 KEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 35 WEIDPSELDFSSSAIIGKGSFGEILKAYWRGT-------PVAIKRIL--PSLSDDRLVIQ 85
WE L +G+G+FG++++A G VA+K + + S+ R ++
Sbjct: 24 WEFPRDRLKLGKP--LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 81
Query: 86 DFRHEVNLLVKL-RHPNIVQFLGAVTE-RKPLMLITEYLRGGDLHKYLKEK 134
E+ +L+ + H N+V LGA T+ PLM+I E+ + G+L YL+ K
Sbjct: 82 ----ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 66
Query: 94 LVKLRHPNIVQ---FLGAVTERKPLM---LITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K ++ L+ +Y+ Y + K L
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 127 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 182
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 183 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+D E+D ++IGKGSFG+++KAY R VAIK I + + + + EV LL
Sbjct: 53 MDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLL 104
Query: 95 VKLRHPN------IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFA 146
+ + IV R L L+ E L +L+ L+ +S + FA
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFA 163
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ + +L IIH DLKP N+LL N +K+ DFG S Q +Y+
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQX- 218
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
S Y +PEV YD +D++S IL EM GEP + + + E
Sbjct: 219 --IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 66
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 127 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 182
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 183 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 66
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 127 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 182
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 183 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 25 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 74
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 75 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 135 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 190
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 191 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 18 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 67
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 68 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 128 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 183
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 184 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 45 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 94
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 95 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 155 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 210
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 211 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+D E+D ++IGKGSFG+++KAY R VAIK I + + + + EV LL
Sbjct: 34 MDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLL 85
Query: 95 VKLRHPN------IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFA 146
+ + IV R L L+ E L +L+ L+ +S + FA
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFA 144
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ + +L IIH DLKP N+LL N +K+ DFG S Q +Y+
Sbjct: 145 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS----CQLGQRIYQX- 199
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
S Y +PEV YD +D++S IL EM GEP + + + E
Sbjct: 200 --IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 55 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 104
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 105 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 165 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 220
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 221 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 21 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 70
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 71 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 131 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSX 186
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 187 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 87 FRHEVNLLVKLR-HPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF 145
FR EV +L + + H N+++ + E L+ E +RGG + ++ ++ + A
Sbjct: 58 FR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSH---D 201
D+A + +LHN+ I HRDLKP N+L + + +K+ DF L IK+
Sbjct: 117 VQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 202 VYKMTGETGSYRYMAPEVFKHRK-----YDKKVDVFSFAMILYEMLEGEPPLAN 250
++ GS YMAPEV + YDK+ D++S +ILY +L G PP
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 51 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 100
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 161 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 216
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 217 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 53 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 102
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 103 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 163 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 218
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 219 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 55
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E + DL ++ E+GAL
Sbjct: 56 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 168
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 169 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 220
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 221 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 22 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 71
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 72 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 132 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 187
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 188 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 96 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 145
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGG---DLHKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 146 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 206 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 261
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 262 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 26/236 (11%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLL 94
+D E+D ++IGKGSFG+++KAY R VAIK I + + + + EV LL
Sbjct: 53 MDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKII----KNKKAFLNQAQIEVRLL 104
Query: 95 VKLRHPN------IVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFA 146
+ + IV R L L+ E L +L+ L+ +S + FA
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFA 163
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ + +L IIH DLKP N+LL N +K+ DFG S Q +Y+
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS----CQLGQRIYQX- 218
Query: 207 GETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAE 262
S Y +PEV YD +D++S IL EM GEP + + + E
Sbjct: 219 --IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 30 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 79
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 80 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 140 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 195
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 196 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 29/221 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRH-EVNLLV 95
P E+ ++ + +IG GSFG + +A G VAIK++L + F++ E+ ++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 96 KLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVNFA 146
KL H NIV+ F + E+K L L+ +Y+ Y + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V +
Sbjct: 129 YQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSXIC 184
Query: 207 GETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 185 ----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFR---HEVNL 93
P E+ ++ + +IG GSFG + +A G VAIK++L QD R E+ +
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----------QDKRFKNRELQI 66
Query: 94 LVKLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVN 144
+ KL H NIV+ F + E+K L L+ +Y+ Y + K L
Sbjct: 67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
+ + R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V
Sbjct: 127 YMYQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSY 182
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 183 IC----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 31 NKCDWEIDPSELDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFR 88
NK WE+ + + S +G G++G + A + G VAIK++ + + +R
Sbjct: 34 NKTAWELPKT---YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR 90
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPL------MLITEYLRGGDLHKYLKEKGALSPSTA 142
E+ LL ++H N++ L T L L+ +++ DL K + + S
Sbjct: 91 -ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGME--FSEEKI 146
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDV 202
+ +G+ Y+H+ ++HRDLKP N L VN + LK+ DFGL++ H
Sbjct: 147 QYLVYQMLKGLKYIHSAG--VVHRDLKPGN-LAVNEDCE-LKILDFGLAR-------HAD 195
Query: 203 YKMTGETGSYRYMAPEV-FKHRKYDKKVDVFSFAMILYEMLEGE 245
+MTG + Y APEV Y++ VD++S I+ EML G+
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 44 FSSSAIIGKGSFGEILKAY--WRGTPVAIKRI-LPSLSDDR--LVIQDFRHEVNLLVKLR 98
+ A IG G++G + KA G VA+K + +P+ L I R EV LL +L
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRRLE 69
Query: 99 ---HPNIVQFLGAV----TERK-PLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALD 148
HPN+V+ + T+R+ + L+ E++ DL YL + L T +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 149 IARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGE 208
RG+ +LH N I+HRDLKP N+L+ +S +K+ DFGL+++ Q + +T
Sbjct: 129 FLRGLDFLHA--NCIVHRDLKPENILV--TSGGTVKLADFGLARIYSYQMA-----LTPV 179
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEP 246
+ Y APEV Y VD++S I EM +P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 50 IGKGSFG--EILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
+G+G F ++++ G A+KRIL DR ++ + E ++ HPNI++ +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHPNILRLVA 93
Query: 108 -AVTERKP---LMLITEYLRGGDLH---KYLKEKGA-LSPSTAVNFALDIARGMAYLHNE 159
+ ER L+ + + G L + LK+KG L+ + L I RG+ +H +
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGL--SKLIKVQNSHDVYKM---TGETGSYRY 214
HRDLKP N+LL + L D G I V+ S + + + Y
Sbjct: 154 GYA--HRDLKPTNILLGDEGQPVLM--DLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 215 MAPEVFK---HRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAAKYVAEGHRPFFRA 270
APE+F H D++ DV+S +LY M+ GE P ++ ++ + ++
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQS 269
Query: 271 KGFTPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDHHWNIF 318
+ L +L D +QRP +L +LE ++ P H I
Sbjct: 270 PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 50 IGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLV------IQDFRHEVNLLVKLRHPNIV 103
IG+GS+G + A T R + ++ +++ ++ + EV L+ KL HPNI
Sbjct: 34 IGQGSYGVVRVAIENQTRAI--RAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 104 QFLGAVTERKPLMLITEYLRGGDLHKYLKE--------------KGALSPS-----TAVN 144
+ + + + L+ E GG L L K + P A+N
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 145 FAL---------------------DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHL 183
++ I + YLHN+ I HRD+KP N L + + +
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG--ICHRDIKPENFLFSTNKSFEI 209
Query: 184 KVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK--HRKYDKKVDVFSFAMILYEM 241
K+ DFGLSK N+ + Y MT + G+ ++APEV + Y K D +S ++L+ +
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 242 LEGEPPL 248
L G P
Sbjct: 270 LMGAVPF 276
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 54
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 55 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 114
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 115 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 167
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 168 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 219
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 220 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 83
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 196
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 197 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 248
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 249 -IGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 56
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 117 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 169
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 170 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 221
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 222 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 98
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 211
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 212 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 263
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 264 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 83
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 196
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 197 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 248
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 249 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 83
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 196
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 197 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 248
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 249 -IGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 84
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 197
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 198 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 249
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 250 -IGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 50 IGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH---PNIVQ 104
+G+G++G + K G A+KRI +++ + R +L + R P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQ----EQKRLLXDLDISXRTVDCPFTVT 97
Query: 105 FLGAVTERKPLMLITEYLRGGDLHKYLKE---KGALSPSTAVN-FALDIARGMAYLHNEP 160
F GA+ + + E L L K+ K+ KG P + A+ I + + +LH++
Sbjct: 98 FYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE-- 218
+VI HRD+KP NVL+ ++ +K DFG+S + + D+ + G Y APE
Sbjct: 157 SVI-HRDVKPSNVLI--NALGQVKXCDFGISGYLVDDVAKDI-----DAGCKPYXAPERI 208
Query: 219 --VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANY-EPYEAAKYVAEGHRPFFRAKGFTP 275
+ Y K D++S + E+ P ++ P++ K V E P A F+
Sbjct: 209 NPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA 268
Query: 276 ELRELTEKCWAADMNQRPSF 295
E + T +C + +RP++
Sbjct: 269 EFVDFTSQCLKKNSKERPTY 288
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 90
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 151 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 203
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 204 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 255
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 256 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 29/221 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRH-EVNLLV 95
P E+ ++ + +IG GSFG + +A G VAIK++L + F++ E+ ++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 96 KLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVNFA 146
KL H NIV+ F + E+K L L+ +Y+ Y + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V +
Sbjct: 129 YQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSYIC 184
Query: 207 GETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 185 ----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 84
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 197
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 198 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 249
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 250 -IGGQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 70
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 183
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 184 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 235
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 236 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 29/221 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKAYW--RGTPVAIKRILPSLSDDRLVIQDFRH-EVNLLV 95
P E+ ++ + +IG GSFG + +A G VAIK++L + F++ E+ ++
Sbjct: 17 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMR 68
Query: 96 KLRHPNIVQ---FLGAVTERKP---LMLITEYLRGGDL---HKYLKEKGALSPSTAVNFA 146
KL H NIV+ F + E+K L L+ +Y+ Y + K L +
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 147 LDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT 206
+ R +AY+H+ I HRD+KP+N+LL +A LK+ DFG +K + V+ +V +
Sbjct: 129 YQLFRSLAYIHS--FGICHRDIKPQNLLLDPDTA-VLKLCDFGSAKQL-VRGEPNVSYIC 184
Query: 207 GETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
S Y APE +F Y +DV+S +L E+L G+P
Sbjct: 185 ----SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 71
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 184
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 185 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 236
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 237 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 84
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 197
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 198 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 249
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 250 -IGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 103
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 164 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 216
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 217 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 268
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 269 IRG-QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 84
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 145 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 197
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 198 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 249
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 250 -IGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 78
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 79 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 139 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 191
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 192 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 243
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 244 IRG-QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 56
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 117 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 169
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 170 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 221
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 222 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 56
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 117 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 169
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 170 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 221
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 222 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 55
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 56 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 116 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 168
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 169 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 220
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 221 IRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 98
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 159 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 211
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 212 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 263
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 264 IRG-QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 29/285 (10%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH- 99
D + +G G+ G++ K +R T +A+K++ S + + ++ R ++L V L+
Sbjct: 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE----ENKRILMDLDVVLKSH 81
Query: 100 --PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTAVNFALDIARGMAY 155
P IVQ G + + E + G + LK++ G + + I + + Y
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
L E + +IHRD+KP N+LL +K+ DFG+S + + D G YM
Sbjct: 140 L-KEKHGVIHRDVKPSNILL--DERGQIKLCDFGISGRLVDDKAKDR-----SAGCAAYM 191
Query: 216 APEVF-----KHRKYDKKVDVFSFAMILYEMLEGEPPLANYEP-YEAAKYVAEGHRPFFR 269
APE YD + DV+S + L E+ G+ P N + +E V + P
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP 251
Query: 270 AK-GFTPELRELTEKCWAADMNQRPSFLDILK-RLEKIKETLPTD 312
GF+ + + + C D +RP + +L+ K ETL D
Sbjct: 252 GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVD 296
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 83
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 144 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 196
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E
Sbjct: 197 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI------ 248
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 249 -IGGQVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 71
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 184
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 185 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 236
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 237 IRG-QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 70
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 131 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 183
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 184 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 235
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A + RP+F +I
Sbjct: 236 IRG-QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 43 DFSSSAIIGKGSFGEI-----LKAYWRGTPVAIKRIL-PSLSDDRLVIQDFRHEVNLLVK 96
+F ++G G++G++ + + G A+K + ++ + R E +L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 97 LRH-PNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAY 155
+R P +V A L LI +Y+ GG+L +L ++ + + +I + +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 156 LHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYM 215
LH II+RD+K N+LL S H+ + DFGLSK + Y G + YM
Sbjct: 175 LHKLG--IIYRDIKLENILL--DSNGHVVLTDFGLSKEFVADETERAYDFCG---TIEYM 227
Query: 216 APEVFK--HRKYDKKVDVFSFAMILYEMLEGEPPLA 249
AP++ + +DK VD +S +++YE+L G P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 37 IDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSD-DRLVIQDFRHEVNL 93
++ EL ++ +G F + +A G A+KR+L + + +R +IQ EV
Sbjct: 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ----EVCF 78
Query: 94 LVKLR-HPNIVQFLGAV--------TERKPLMLITEYLRGG--DLHKYLKEKGALSPSTA 142
+ KL HPNIVQF A T + +L+TE +G + K ++ +G LS T
Sbjct: 79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138
Query: 143 VNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLI-------- 194
+ R + ++H + IIHRDLK N+LL N +K+ DFG + I
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT--IKLCDFGSATTISHYPDYSW 196
Query: 195 KVQNSHDVYKMTGETGSYRYMAPEV---FKHRKYDKKVDVFSFAMILY 239
Q V + + Y PE+ + + +K D+++ ILY
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 38/278 (13%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH---- 89
E +P E + ++G G FG + PVAIK + DR I D+
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNG 71
Query: 90 -----EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPST 141
EV LL K+ +++ L +LI E DL ++ E+GAL
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A +F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K
Sbjct: 132 ARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DT 184
Query: 202 VYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYV 260
VY T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + +
Sbjct: 185 VY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEI 236
Query: 261 AEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
G + FFR + + E + L C A RP+F +I
Sbjct: 237 IRG-QVFFRQR-VSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTPVAIKRILPSL----------SDDRLVIQ----DFR 88
D+ + +G F +I+ A+K+ SL ++D++ I+ DF+
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91
Query: 89 HEVNLLVKLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHKY-------LKEKGALSPST 141
+E+ ++ +++ + G +T + +I EY+ + K+ K P
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 142 AVNFAL-DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSH 200
+ + + +Y+HNE N I HRD+KP N+L+ +K+ DFG S+ + +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILM--DKNGRVKLSDFGESEYMVDK--- 205
Query: 201 DVYKMTGETGSYRYMAPEVFKHR-KYD-KKVDVFSFAMILYEMLEGEPPLA 249
K+ G G+Y +M PE F + Y+ KVD++S + LY M P +
Sbjct: 206 ---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 41/230 (17%)
Query: 43 DFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF A++G+G+FG+++KA AIK+I + ++ EV LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVXLLASLNHQ 62
Query: 101 NIVQFLGAVTERK-------------PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL 147
+V++ A ER+ L + EY L+ + + L+ + L
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-LNQQRDEYWRL 121
Query: 148 --DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK- 204
I ++Y+H++ IIHR+LKP N+ + S ++K+GDFGL+K V S D+ K
Sbjct: 122 FRQILEALSYIHSQG--IIHRNLKPXNIFIDESR--NVKIGDFGLAK--NVHRSLDILKL 175
Query: 205 -----------MTGETGSYRYMAPEVFKHR-KYDKKVDVFSFAMILYEML 242
+T G+ Y+A EV Y++K+D +S +I +E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH------- 89
P E + ++G G FG + PVAIK + DR I D+
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNGTRV 54
Query: 90 --EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPSTAVN 144
EV LL K+ +++ L +LI E DL ++ E+GAL A +
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K VY
Sbjct: 115 FFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DTVY- 166
Query: 205 MTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
T G+ Y PE + HR + + V+S ++LY+M+ G+ P + E G
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIG 218
Query: 264 HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
+ FFR + + E + L C A + RP+F +I
Sbjct: 219 GQVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH------- 89
P E + ++G G FG + PVAIK + DR I D+
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNGTRV 54
Query: 90 --EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPSTAVN 144
EV LL K+ +++ L +LI E DL ++ E+GAL A +
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K VY
Sbjct: 115 FFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DTVY- 166
Query: 205 MTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + + G
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEIIRG 219
Query: 264 HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
+ FFR + + E + L C A + RP+F +I
Sbjct: 220 -QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 114/253 (45%), Gaps = 37/253 (14%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGA 108
I +G FG + KA VA+K I P D+ Q R E+ ++H N++QF+ A
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVK-IFPL--QDKQSWQSER-EIFSTPGMKHENLLQFIAA 77
Query: 109 VTERK----PLMLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNE----- 159
L LIT + G L YLK ++ + + A ++RG++YLH +
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLK-GNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 160 -----PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRY 214
P+ I HRD K +NVLL + L DFGL+ ++ + G+ G+ RY
Sbjct: 137 GEGHKPS-IAHRDFKSKNVLLKSDLTAVL--ADFGLA--VRFEPGKPPGDTHGQVGTRRY 191
Query: 215 MAPEVFK-----HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFR 269
MAPEV + R ++D+++ ++L+E++ A V E PF
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS--------RCKAADGPVDEYMLPFEE 243
Query: 270 AKGFTPELRELTE 282
G P L EL E
Sbjct: 244 EIGQHPSLEELQE 256
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 39 PSELDFSSSAIIGKGSFGEILKA--YWRGTPVAIKRILPSLSDDRLVIQDFRH------- 89
P E + ++G G FG + PVAIK + DR I D+
Sbjct: 1 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV----EKDR--ISDWGELPNGTRV 54
Query: 90 --EVNLLVKLRH--PNIVQFLGAVTERKPLMLITEYLRG-GDLHKYLKEKGALSPSTAVN 144
EV LL K+ +++ L +LI E DL ++ E+GAL A +
Sbjct: 55 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 145 FALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYK 204
F + + + HN ++HRD+K N+L ++ + LK+ DFG L+K VY
Sbjct: 115 FFWQVLEAVRHCHNXG--VLHRDIKDENIL-IDLNRGELKLIDFGSGALLK----DTVY- 166
Query: 205 MTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEG 263
T G+ Y PE + HR + + V+S ++LY+M+ G+ P+E + + G
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------PFEHDEEIIRG 219
Query: 264 HRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
+ FFR + + E + L C A + RP+F +I
Sbjct: 220 -QVFFRQR-VSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP------NI 102
+IGKGSFG+++KAY V L + +++ + E+ +L LR N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTAVNFALDIARGMAYLHNEP 160
+ L T R + + E L +L++ +K+ S FA I + + LH
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK-- 218
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
N IIH DLKP N+LL +KV DFG S ++ ++ S Y APEV
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------CYEHQRVYTXIQSRFYRAPEVI 271
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+Y +D++S IL E+L G P L
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP------NI 102
+IGKGSFG+++KAY V L + +++ + E+ +L LR N+
Sbjct: 104 VIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTAVNFALDIARGMAYLHNEP 160
+ L T R + + E L +L++ +K+ S FA I + + LH
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK-- 218
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
N IIH DLKP N+LL +KV DFG S ++ ++ S Y APEV
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------CYEHQRVYTXIQSRFYRAPEVI 271
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+Y +D++S IL E+L G P L
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +IG+G+FGE+ + T A+K + R FR E ++LV
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIARGMAYLHNE 159
I A + L L+ +Y GGDL L + P F + ++ + +H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 160 PNVIIHRDLKPRNVLL-VNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
V HRD+KP NVLL VN H+++ DFG +K+ + V G+ Y++PE
Sbjct: 211 HYV--HRDIKPDNVLLDVNG---HIRLADFG--SCLKMNDDGTVQSSVA-VGTPDYISPE 262
Query: 219 VFKHR-----KYDKKVDVFSFAMILYEMLEGEPPL 248
+ + KY + D +S + +YEML GE P
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +IG+G+FGE+ + T A+K + R FR E ++LV
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIARGMAYLHNE 159
I A + L L+ +Y GGDL L + P F + ++ + +H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 160 PNVIIHRDLKPRNVLL-VNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPE 218
V HRD+KP NVLL VN H+++ DFG +K+ + V G+ Y++PE
Sbjct: 195 HYV--HRDIKPDNVLLDVNG---HIRLADFG--SCLKMNDDGTVQSSVA-VGTPDYISPE 246
Query: 219 VFKHR-----KYDKKVDVFSFAMILYEMLEGEPPL 248
+ + KY + D +S + +YEML GE P
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAY-WRGTPVAIKRILPSLSDDRLV--------IQD 86
E+ + ++ I GS+G + G PVAIKR+ ++SD R V +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTE-RKPLM----LITEYLRGGDLHKYLKEKGALSPST 141
E+ LL HPNI+ +P M L+TE +R ++ +SP
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
F I G+ LH ++HRDL P N+LL ++ + + + DF L++ +++ D
Sbjct: 136 IQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADN--NDITICDFNLAR----EDTAD 187
Query: 202 VYKMTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEML 242
K T + Y APE V + + + K VD++S ++ EM
Sbjct: 188 ANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 36 EIDPSELDFSSSAIIGKGSFGEILKAY-WRGTPVAIKRILPSLSDDRLV--------IQD 86
E+ + ++ I GS+G + G PVAIKR+ ++SD R V +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 87 FRHEVNLLVKLRHPNIVQFLGAVTE-RKPLM----LITEYLRGGDLHKYLKEKGALSPST 141
E+ LL HPNI+ +P M L+TE +R ++ +SP
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
F I G+ LH ++HRDL P N+LL ++ + + + DF L++ +++ D
Sbjct: 136 IQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADN--NDITICDFNLAR----EDTAD 187
Query: 202 VYKMTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEML 242
K T + Y APE V + + + K VD++S ++ EM
Sbjct: 188 ANKTHYVTHRW-YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 36/222 (16%)
Query: 41 ELDFSSSAIIGKGSFGEILKA-YWRGTPVAIKRILPSLSDDRLVIQDFR---HEVNLLVK 96
E+ +++ +IG GSFG + +A VAIK++L QD R E+ ++
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----------QDKRFKNRELQIMRI 88
Query: 97 LRHPNIVQ---FLGAVTERKP---LMLITEYL-----RGGDLHKYLKEKGALSPSTAVNF 145
++HPN+V F + ++K L L+ EY+ R Y K K + +
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS--RHYAKLKQTMPMLLIKLY 146
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+ R +AY+H+ I HRD+KP+N LL++ + LK+ DFG +K++ + +V +
Sbjct: 147 MYQLLRSLAYIHS--IGICHRDIKPQN-LLLDPPSGVLKLIDFGSAKIL-IAGEPNVSXI 202
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEP 246
S Y APE +F Y +D++S ++ E+++G+P
Sbjct: 203 C----SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP 240
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 38/275 (13%)
Query: 41 ELDFSSSAIIGKGSFGEILKAYWRGT---PVAIK-----RIL--PSLSDDRLVIQDFRHE 90
E ++ ++GKG FG + + R T VAIK R+L LSD E
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL----E 84
Query: 91 VNLLVKLR----HPNIVQFLGAVTERKPLMLITEY-LRGGDLHKYLKEKGALSPSTAVNF 145
V LL K+ HP +++ L ++ ML+ E L DL Y+ EKG L + F
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCF 144
Query: 146 ALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
+ + + H+ ++HRD+K N+ L++ K+ DFG L+ HD
Sbjct: 145 FGQVVAAIQHCHS--RGVVHRDIKDENI-LIDLRRGCAKLIDFGSGALL-----HD-EPY 195
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGH 264
T G+ Y PE + +H+ + V+S ++LY+M+ G+ P+E + + E
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD------IPFERDQEILEAE 249
Query: 265 RPFFRAKGFTPELRELTEKCWAADMNQRPSFLDIL 299
F +P+ L +C A + RPS +IL
Sbjct: 250 LHF--PAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 49 IIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP------NI 102
+IGKG FG+++KAY V L + +++ + E+ +L LR N+
Sbjct: 104 VIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 103 VQFLGAVTERKPLMLITEYLRGGDLHKYLKEK--GALSPSTAVNFALDIARGMAYLHNEP 160
+ L T R + + E L +L++ +K+ S FA I + + LH
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK-- 218
Query: 161 NVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVF 220
N IIH DLKP N+LL +KV DFG S ++ ++ S Y APEV
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------CYEHQRVYXXIQSRFYRAPEVI 271
Query: 221 KHRKYDKKVDVFSFAMILYEMLEGEPPL 248
+Y +D++S IL E+L G P L
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 43 DFSSSAIIGKGSFGEI--LKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +IG+G+F E+ +K G A+K + R + FR E ++LV
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRR 121
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIARGMAYLHNE 159
I Q A + L L+ EY GGDL L + G P+ F L +I + +H
Sbjct: 122 WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL 181
Query: 160 PNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEV 219
V HRD+KP N+LL H+++ DFG +K++ V + G+ Y++PE+
Sbjct: 182 GYV--HRDIKPDNILL--DRCGHIRLADFG--SCLKLRADGTVRSLVA-VGTPDYLSPEI 234
Query: 220 FK-------HRKYDKKVDVFSFAMILYEMLEGEPPL 248
+ Y + D ++ + YEM G+ P
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 84 IQDFRHEVNLLVKLRHPNIVQFLGAVTE--RKPLMLITEYLRGGDLHKYLKEKGALSPST 141
I+ E+ +L KL HPN+V+ + + + L ++ E + G + + K LS
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQ 138
Query: 142 AVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHD 201
A + D+ +G+ YLH + IIHRD+KP N+L+ H+K+ DFG+S K ++
Sbjct: 139 ARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLV--GEDGHIKIADFGVSNEFKGSDAL- 193
Query: 202 VYKMTGETGSYRYMAPEVFKHRK---YDKKVDVFSFAMILYEMLEGEPPLAN 250
++ G+ +MAPE + K +DV++ + LY + G+ P +
Sbjct: 194 ---LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 126 DLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKV 185
DL ++ E+GAL A +F + + + HN ++HRD+K N+L ++ + LK+
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHN--CGVLHRDIKDENIL-IDLNRGELKL 199
Query: 186 GDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFK-HRKYDKKVDVFSFAMILYEMLEG 244
DFG L+K VY T G+ Y PE + HR + + V+S ++LY+M+ G
Sbjct: 200 IDFGSGALLK----DTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 245 EPPLANYEPYEAAKYVAEGHRPFFRAKGFTPELRELTEKCWAADMNQRPSFLDI 298
+ P+E + + G + FFR + + E + L C A + RP+F +I
Sbjct: 254 DI------PFEHDEEIIRG-QVFFRQR-VSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 38 DPS------ELDFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRH 89
DPS + F + +G GS+GE+ K + G A+KR + + +
Sbjct: 47 DPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKL-A 105
Query: 90 EVNLLVKL-RHPNIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAV-NFAL 147
EV K+ +HP V+ A E L L TE L G L ++ + GA P V +
Sbjct: 106 EVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLR 164
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTG 207
D +A+LH++ ++H D+KP N+ L K+GDFGL + + +V
Sbjct: 165 DTLLALAHLHSQ--GLVHLDVKPANIFL--GPRGRCKLGDFGLLVELGTAGAGEV----- 215
Query: 208 ETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPLANYE-PY--EAAKYVAEGH 264
+ G RYMAPE+ + Y DVFS + + E+ N E P+ E + + +G+
Sbjct: 216 QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEV------ACNMELPHGGEGWQQLRQGY 268
Query: 265 RPFFRAKGFTPELREL 280
P G + ELR +
Sbjct: 269 LPPEFTAGLSSELRSV 284
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 68 VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQF--LGAVTERKPLMLITEYLRGG 125
VA+K +LS D + + E +L+ P++V G + + L + + G
Sbjct: 62 VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ--LYVDXRLINGV 119
Query: 126 DLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKV 185
DL L+ +G L+P AV I G A HRD+KP N+L+ S+ D +
Sbjct: 120 DLAAXLRRQGPLAPPRAVAIVRQI--GSALDAAHAAGATHRDVKPENILV--SADDFAYL 175
Query: 186 GDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGE 245
DFG++ + ++ G+ Y APE F + D+++ +LYE L G
Sbjct: 176 VDFGIAS---ATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGS 232
Query: 246 PP 247
PP
Sbjct: 233 PP 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 44 FSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ A IG+G+FGE+ KA R G VA+K++L + I R E+ +L L+H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 78
Query: 102 IVQFLGAV-TERKP-------LMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIAR- 151
+V + T+ P + L+ ++ + L + V F L +I R
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRV 130
Query: 152 ------GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
G+ Y+H N I+HRD+K NVL+ LK+ DFGL++ + + +
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRY 186
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAA 257
+ Y PE + R Y +D++ I+ EM P + N E ++ A
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 44 FSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ A IG+G+FGE+ KA R G VA+K++L + I R E+ +L L+H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 78
Query: 102 IVQFLGAV-TERKP-------LMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIAR- 151
+V + T+ P + L+ ++ + L + V F L +I R
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRV 130
Query: 152 ------GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
G+ Y+H N I+HRD+K NVL+ LK+ DFGL++ + + +
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRY 186
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAA 257
+ Y PE + R Y +D++ I+ EM P + N E ++ A
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 44 FSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ A IG+G+FGE+ KA R G VA+K++L + I R E+ +L L+H N
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 78
Query: 102 IVQFLGAV-TERKP-------LMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIAR- 151
+V + T+ P + L+ ++ + L + V F L +I R
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRV 130
Query: 152 ------GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
G+ Y+H N I+HRD+K NVL+ LK+ DFGL++ + + +
Sbjct: 131 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRY 186
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAA 257
+ Y PE + R Y +D++ I+ EM P + N E ++ A
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 44 FSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPN 101
+ A IG+G+FGE+ KA R G VA+K++L + I R E+ +L L+H N
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHEN 77
Query: 102 IVQFLGAV-TERKP-------LMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL-DIAR- 151
+V + T+ P + L+ ++ + L + V F L +I R
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRV 129
Query: 152 ------GMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKM 205
G+ Y+H N I+HRD+K NVL+ LK+ DFGL++ + + +
Sbjct: 130 MQMLLNGLYYIHR--NKILHRDMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRY 185
Query: 206 TGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEMLEGEPPL-ANYEPYEAA 257
+ Y PE + R Y +D++ I+ EM P + N E ++ A
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 239
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G FG + K R G AIKR L+ R V +H ++V++
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 74
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEK----GALSPSTAVNFALDIARGMAYLHNEPNVI 163
A E +++ EY GG L + E + + L + RG+ Y+H+ +
Sbjct: 75 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 132
Query: 164 IHRDLKPRNVLLV-----NSSADHLKVGDFGLSKLI-KVQNSHDVYKMTG---ETGSYRY 214
+H D+KP N+ + N++++ D+ +K++ K+ + V +++ E G R+
Sbjct: 133 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 192
Query: 215 MAPEVFKHR-KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+A EV + + K D+F+ A+ + EP N + + + +G P +
Sbjct: 193 LANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHE---IRQGRLPRI-PQVL 248
Query: 274 TPELRELTEKCWAADMNQRPSFLDILK 300
+ E EL + D +RPS + ++K
Sbjct: 249 SQEFTELLKVMIHPDPERRPSAMALVK 275
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G FG + K R G AIKR L+ R V +H ++V++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEK----GALSPSTAVNFALDIARGMAYLHNEPNVI 163
A E +++ EY GG L + E + + L + RG+ Y+H+ +
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 134
Query: 164 IHRDLKPRNVLLV-----NSSADHLKVGDFGLSKLI-KVQNSHDVYKMTG---ETGSYRY 214
+H D+KP N+ + N++++ D+ +K++ K+ + V +++ E G R+
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 194
Query: 215 MAPEVFKHR-KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+A EV + + K D+F+ A+ + EP N + + + +G P +
Sbjct: 195 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---IRQGRLPRI-PQVL 250
Query: 274 TPELRELTEKCWAADMNQRPSFLDILK 300
+ E EL + D +RPS + ++K
Sbjct: 251 SQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G FG + K R G AIKR L+ R V +H ++V++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 76
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEK----GALSPSTAVNFALDIARGMAYLHNEPNVI 163
A E +++ EY GG L + E + + L + RG+ Y+H+ +
Sbjct: 77 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 134
Query: 164 IHRDLKPRNVLLV-----NSSADHLKVGDFGLSKLI-KVQNSHDVYKMTG---ETGSYRY 214
+H D+KP N+ + N++++ D+ +K++ K+ + V +++ E G R+
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 194
Query: 215 MAPEVFKHR-KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+A EV + + K D+F+ A+ + EP N + + + +G P +
Sbjct: 195 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---IRQGRLPRI-PQVL 250
Query: 274 TPELRELTEKCWAADMNQRPSFLDILK 300
+ E EL + D +RPS + ++K
Sbjct: 251 SQEFTELLKVMIHPDPERRPSAMALVK 277
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 42/211 (19%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRH-PNIVQ 104
+S ++G G G++L+ + + T K L L D R EV L + P+IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQE--KFALKMLQD----CPKARREVELHWRASQCPHIVR 75
Query: 105 FLGAVTE----RKPLMLITEYLRGGDLHKYLKEKG--ALSPSTAVNFALDIARGMAYLHN 158
+ RK L+++ E L GG+L ++++G A + A I + YLH+
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 159 EPNVIIHRDLKPRNVLLVNSSADH-LKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
I HRD+KP N+L + + LK+ DFG +K + TGE
Sbjct: 136 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTGE--------- 173
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPL 248
KYDK D++S +I+Y +L G PP
Sbjct: 174 ------KYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 50 IGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G FG + K R G AIKR L+ R V +H ++V++
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFS 78
Query: 108 AVTERKPLMLITEYLRGGDLHKYLKEK----GALSPSTAVNFALDIARGMAYLHNEPNVI 163
A E +++ EY GG L + E + + L + RG+ Y+H+ +
Sbjct: 79 AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--L 136
Query: 164 IHRDLKPRNVLLV-----NSSADHLKVGDFGLSKLI-KVQNSHDVYKMTG---ETGSYRY 214
+H D+KP N+ + N++++ D+ +K++ K+ + V +++ E G R+
Sbjct: 137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 196
Query: 215 MAPEVFKHR-KYDKKVDVFSFAMILYEMLEGEPPLANYEPYEAAKYVAEGHRPFFRAKGF 273
+A EV + + K D+F+ A+ + EP N + + + +G P +
Sbjct: 197 LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---IRQGRLPRI-PQVL 252
Query: 274 TPELRELTEKCWAADMNQRPSFLDILK 300
+ E EL + D +RPS + ++K
Sbjct: 253 SQEFTELLKVMIHPDPERRPSAMALVK 279
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 43 DFSSSAIIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +IG+G+FGE+ + A+K + R FR E ++LV
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNF-------ALDIARGM 153
I A + L L+ +Y GGDL L + P F A+D +
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 154 AYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYR 213
Y +HRD+KP N+L+ H+++ DFG +K+ V G+
Sbjct: 195 HY--------VHRDIKPDNILM--DMNGHIRLADFG--SCLKLMEDGTVQSSVA-VGTPD 241
Query: 214 YMAPEVFKHR-----KYDKKVDVFSFAMILYEMLEGEPPL 248
Y++PE+ + +Y + D +S + +YEML GE P
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGALSP---STAVNFALDIARGMAYLH 157
N V L + + L + + R +L ++ + +L ++ + IA + +LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 158 NEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMT---------GE 208
++ ++HRDLKP N+ + D +KVGDFGL + Q+ + +T G+
Sbjct: 182 SKG--LMHRDLKPSNIFF--TMDDVVKVGDFGLVTAMD-QDEEEQTVLTPMPAYATHXGQ 236
Query: 209 TGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEML 242
G+ YM+PE Y KVD+FS +IL+E+L
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 43 DFSSSAIIGKGSFGEILKAYWR--GTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHP 100
DF +G+G FG + +A + AIKRI L + L + EV L KL HP
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLEHP 64
Query: 101 NIVQFLGAVTERKP 114
IV++ A E P
Sbjct: 65 GIVRYFNAWLETPP 78
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + LK+ DFGL++ + + MT E + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLAR-----TAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 38/239 (15%)
Query: 34 DWEIDPSELDFSSSAIIGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEV 91
DW+I P + +IG GS+G + +AY VAIK+IL + +D + + E+
Sbjct: 48 DWQI-PDRYEIRH--LIGTGSYGHVCEAYDKLEKRVVAIKKIL-RVFEDLIDCKRILREI 103
Query: 92 NLLVKLRHPNIVQFLGAV----TERKPLMLITEYLRGGDLHKYLKEKGALSPSTAVNFAL 147
+L +L H ++V+ L V E+ + + + D K + L+
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 148 DIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSK--------------- 192
++ G+ Y+H+ I+HRDLKP N L+ + +KV DFGL++
Sbjct: 164 NLLVGVKYVHSAG--ILHRDLKPANCLVNQDCS--VKVCDFGLARTVDYPENGNSQLPIS 219
Query: 193 -------LIKVQNSHDVYK-MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEML 242
L+ ++ ++ + +TG + Y APE + Y + +DV+S I E+L
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 49 IIGKGSFGEILKAYWRGTP--VAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFL 106
+IG+GS+G + AY + T VAIK++ + +D + + E+ +L +L+ I++
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 107 GAVTERKPL----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
+ L + I + DL K K L+ ++ G ++H
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG-- 149
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVY------------------K 204
IIHRDLKP N LL + +KV DFGL++ I + ++ +
Sbjct: 150 IIHRDLKPANCLLNQDCS--VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 205 MTGETGSYRYMAPE-VFKHRKYDKKVDVFSFAMILYEML 242
+T + Y APE + Y K +D++S I E+L
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G ++ AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S +I+ EM++G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 34/292 (11%)
Query: 46 SSAIIGKGSFGEILKAYWRGTPVAIKRILPSLSDDRLVIQDFR----HEVNLL-VKLRHP 100
+S +G+G F + + + T + R QD R HE+ +L + P
Sbjct: 33 TSKELGRGKFAVVRQCISKSTG---QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 101 NIVQFLGAVTERKPLMLITEYLRGGDLHKYLKEKGA--LSPSTAVNFALDIARGMAYLHN 158
++ ++LI EY GG++ + A +S + + I G+ YLH
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 159 EPNVIIHRDLKPRNVLLVN-SSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAP 217
N I+H DLKP+N+LL + +K+ DFG+S+ K+ ++ ++ ++ G+ Y+AP
Sbjct: 150 --NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREI---MGTPEYLAP 202
Query: 218 EVFKHRKYDKKVDVFSFAMILYEMLEGEPPLA---NYEPY------------EAAKYVAE 262
E+ + D+++ +I Y +L P N E Y E V++
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
Query: 263 GHRPFFRAKGF-TPELRELTEKCWAADMNQRPSFLDILKRLEKIKETLPTDH 313
F ++ PE R E C + Q+ F ++ E + DH
Sbjct: 263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDH 314
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S +I+ EM++G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLN 91
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 147
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + LK+ DFGL++ + + MT + Y APEV
Sbjct: 148 IIHRDLKPSNIVVKSDCT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDCT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 50 IGKGSFGEILKAY--WRGTPVAIKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLG 107
IG G+ G + AY VAIK++ + + +R E+ L+ + H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLN 90
Query: 108 AVTERKPL-----MLITEYLRGGDLHKYLKEKGALSPSTAVNFALDIARGMAYLHNEPNV 162
T +K L + I L +L + ++ + L + G+ +LH+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 163 IIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKH 222
IIHRDLKP N+++ + + LK+ DFGL++ + + MT + Y APEV
Sbjct: 147 IIHRDLKPSNIVVKSDAT--LKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 223 RKYDKKVDVFSFAMILYEMLEG 244
Y + VD++S I+ EM++G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,838,855
Number of Sequences: 62578
Number of extensions: 413840
Number of successful extensions: 4853
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 328
Number of HSP's that attempted gapping in prelim test: 1069
Number of HSP's gapped (non-prelim): 1131
length of query: 320
length of database: 14,973,337
effective HSP length: 99
effective length of query: 221
effective length of database: 8,778,115
effective search space: 1939963415
effective search space used: 1939963415
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)