Query 020891
Match_columns 320
No_of_seqs 259 out of 655
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 09:42:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020891.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020891hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zrna_ c.108.1.1 (A:) L-2-Hal 52.8 33 0.0024 26.0 8.9 73 46-120 97-173 (220)
2 d2hdoa1 c.108.1.6 (A:1-207) Ph 33.3 87 0.0063 23.3 8.4 61 59-120 97-161 (207)
3 d1qq5a_ c.108.1.1 (A:) L-2-Hal 27.7 66 0.0048 24.5 6.8 62 59-122 108-173 (245)
4 d1u7pa_ c.108.1.17 (A:) Magnes 26.9 49 0.0036 24.4 5.6 73 47-121 51-123 (164)
5 d1v71a1 c.79.1.1 (A:6-323) Hyp 26.1 22 0.0016 29.8 3.5 35 71-107 283-317 (318)
6 d1r5la1 a.5.3.1 (A:25-90) Alph 22.6 26 0.0019 22.9 2.6 28 270-298 37-66 (66)
7 d2hsza1 c.108.1.6 (A:1-224) Ph 22.0 1.3E+02 0.0092 22.2 7.4 72 47-120 100-175 (224)
8 d1bh9b_ a.22.1.3 (B:) TAF(II)2 19.7 33 0.0024 24.0 2.8 37 275-313 52-88 (89)
9 d2auwa2 d.331.1.1 (A:4-87) Hyp 19.6 52 0.0038 22.4 3.9 26 115-140 5-30 (84)
10 d2gfha1 c.108.1.6 (A:1-247) N- 17.8 1.9E+02 0.013 21.8 7.7 69 49-120 116-188 (247)
No 1
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}
Probab=52.75 E-value=33 Score=26.04 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=49.0
Q ss_pred ccHHHHHHHHHcCCCEEEEEecccHHHHHHHHHHhcC----ccceEEEcccCCCCCCHHHHHHHHHHhCCCCCCeEEEE
Q 020891 46 PNLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLN----LEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYE 120 (320)
Q Consensus 46 ~~l~~l~ev~~~~~kkvafvGtPCQI~aLr~~~~~l~----~~~l~~Igl~C~G~~s~~~~~~~L~~~~~~~~~V~~~~ 120 (320)
+....++.+++.+.+-..++..++ ...+.+....+ .+..+..+-....-|+++.++..++.+|++|+++..+.
T Consensus 97 ~~~~~l~~l~~~~~~~~i~tn~~~--~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~Vg 173 (220)
T d1zrna_ 97 EVPDSLRELKRRGLKLAILSNGSP--QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVA 173 (220)
T ss_dssp THHHHHHHHHHTTCEEEEEESSCH--HHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEE
T ss_pred hhHHHHHHHHhcCCeEEeecchHH--HHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEEEe
Confidence 445566666665333334444443 34444444333 25677777888889999999999999999999887775
No 2
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}
Probab=33.31 E-value=87 Score=23.35 Aligned_cols=61 Identities=13% Similarity=0.029 Sum_probs=39.5
Q ss_pred CCEEEEEecccHHHHHHHHHHhcCccceEEEcccC----CCCCCHHHHHHHHHHhCCCCCCeEEEE
Q 020891 59 VKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNC----VDNGTREGLDKFLKAASSEPETVLHYE 120 (320)
Q Consensus 59 ~kkvafvGtPCQI~aLr~~~~~l~~~~l~~Igl~C----~G~~s~~~~~~~L~~~~~~~~~V~~~~ 120 (320)
+.+++++ |.+....++...+.++....+-.-+.| .+-|.+..++..++.++.+|+++..+.
T Consensus 97 ~~~~~iv-T~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~Vg 161 (207)
T d2hdoa1 97 ELRLGIV-TSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIG 161 (207)
T ss_dssp TSEEEEE-CSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred ccccccc-ccccccccccccccccccccccccccccccccchhhhhhhcccccceeeeccceeEec
Confidence 4555444 444566666666666665544333333 234678899999999999888777665
No 3
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}
Probab=27.66 E-value=66 Score=24.50 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=40.8
Q ss_pred CCEEEEEecccHHHHHHHHHHhcCc----cceEEEcccCCCCCCHHHHHHHHHHhCCCCCCeEEEEEe
Q 020891 59 VKRLLFCGVGCQVQALRSVEHHLNL----EKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEFM 122 (320)
Q Consensus 59 ~kkvafvGtPCQI~aLr~~~~~l~~----~~l~~Igl~C~G~~s~~~~~~~L~~~~~~~~~V~~~~fR 122 (320)
.+..+++.++.. .++.+....+. +.+++-+-.-..-|.++.+...++.+|++|+++..+.=+
T Consensus 108 ~~~~v~s~~~~~--~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~VgD~ 173 (245)
T d1qq5a_ 108 LKRAILSNGAPD--MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173 (245)
T ss_dssp SEEEEEESSCHH--HHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred hceeEEeccchH--HHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEEEeCC
Confidence 344455555554 34444444443 345555555556799999999999999999988877643
No 4
>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.89 E-value=49 Score=24.41 Aligned_cols=73 Identities=5% Similarity=0.071 Sum_probs=45.3
Q ss_pred cHHHHHHHHHcCCCEEEEEecccHHHHHHHHHHhcCccceEEEcccCCCCCCHHHHHHHHHHhCCCCCCeEEEEE
Q 020891 47 NLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLKAASSEPETVLHYEF 121 (320)
Q Consensus 47 ~l~~l~ev~~~~~kkvafvGtPCQI~aLr~~~~~l~~~~l~~Igl~C~G~~s~~~~~~~L~~~~~~~~~V~~~~f 121 (320)
+.+.++.++++ +-+++++-.-++....+.+.+.++.... ...+.+...|.++.+...++.++.+++++.-+.=
T Consensus 51 v~e~L~~L~~~-G~~~~v~S~~~~~~~~~~~l~~~~~~~~-~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD 123 (164)
T d1u7pa_ 51 VPEVLGRLQSL-GVPVAAASRTSEIQGANQLLELFDLGKY-FIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDD 123 (164)
T ss_dssp HHHHHHHHHHT-TCCEEEEECCSCHHHHHHHHHHTTCGGG-CSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEES
T ss_pred HHHHHHHHHHC-CCcEEEEeccccchhhccchhccccccc-ceeeecccCCChHHHHHHHHHhCCChHHEEEEcC
Confidence 45666666665 4455554434454444555454554332 2223467789999999999999998887765543
No 5
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=26.14 E-value=22 Score=29.76 Aligned_cols=35 Identities=20% Similarity=0.157 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCccceEEEcccCCCCCCHHHHHHHHH
Q 020891 71 VQALRSVEHHLNLEKLYVLGTNCVDNGTREGLDKFLK 107 (320)
Q Consensus 71 I~aLr~~~~~l~~~~l~~Igl~C~G~~s~~~~~~~L~ 107 (320)
++|++.+...+.-+++. =+.|.||.+++.++++|+
T Consensus 283 lAa~~~~~~~~~~~~Vv--~il~GGN~d~~~~~~~~~ 317 (318)
T d1v71a1 283 FAAARAMKEKLKNKRIG--IIISGGNVDIERYAHFLS 317 (318)
T ss_dssp HHHHHHTGGGGTTCEEE--EEECBCCCCHHHHHHHHT
T ss_pred HHHHHHhHHHcCCCcEE--EEeCCCCCCHHHHHHHHc
Confidence 56666665443333433 347999999999988875
No 6
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.65 E-value=26 Score=22.88 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=22.4
Q ss_pred hhhh--hHHHHHHHHHHhhcchhhhhhcCch
Q 020891 270 YSLD--YHTIRNYLHVNRAWGKKRADKHMPS 298 (320)
Q Consensus 270 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~ 298 (320)
+.+| .+.|+||+..|.++| +-...+.|.
T Consensus 37 f~~~ka~~~l~~y~~~R~~~p-eif~~l~P~ 66 (66)
T d1r5la1 37 FDLDLAWRLLKNYYKWRAECP-EISADLHPR 66 (66)
T ss_dssp TCHHHHHHHHHHHHHHHHHCH-HHHSCCCGG
T ss_pred CCHHHHHHHHHHHHHHHHHCH-HHccCCCCC
Confidence 5555 478999999999995 688888774
No 7
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}
Probab=21.99 E-value=1.3e+02 Score=22.24 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=41.7
Q ss_pred cHHHHHHHHHcCCCEEEEEecccHHHHHHHHHHhcCccceE--EEcccCCC--CCCHHHHHHHHHHhCCCCCCeEEEE
Q 020891 47 NLNTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKLY--VLGTNCVD--NGTREGLDKFLKAASSEPETVLHYE 120 (320)
Q Consensus 47 ~l~~l~ev~~~~~kkvafvGtPCQI~aLr~~~~~l~~~~l~--~Igl~C~G--~~s~~~~~~~L~~~~~~~~~V~~~~ 120 (320)
+...+..+++. +-+++++ |.+.-..++...+.+|..+.+ +++-.-++ -|.++.+...++..+.+++++..+.
T Consensus 100 ~~~~L~~L~~~-g~~~~i~-tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~ig 175 (224)
T d2hsza1 100 VKETLEALKAQ-GYILAVV-TNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVG 175 (224)
T ss_dssp HHHHHHHHHHT-TCEEEEE-CSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHhcc-CCccccc-ccccHHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhhhhhccchhc
Confidence 34556666655 4444433 445555555555566765543 22222222 3667788888888888887776654
No 8
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.74 E-value=33 Score=23.99 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhcchhhhhhcCchHHHHHHHhhhcCchh
Q 020891 275 HTIRNYLHVNRAWGKKRADKHMPSYAKKIVEMYNQNGQI 313 (320)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~y~~~~~~ 313 (320)
..|+.-+-|+.+|+ ...-+-|.|+...+..|.+.|.|
T Consensus 52 EiVE~A~~V~~~~~--e~~PL~P~HireA~rrl~~~g~~ 88 (89)
T d1bh9b_ 52 EVVEEALDVCEKWG--EMPPLQPKHMREAVRRLKSKGQI 88 (89)
T ss_dssp HHHHHHHHHHHHTT--CCSSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhc--cCCCCCcHHHHHHHHHHHHcCCC
Confidence 34666777888885 36679999999999999999975
No 9
>d2auwa2 d.331.1.1 (A:4-87) Hypothetical protein NE0471 N-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=19.64 E-value=52 Score=22.39 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=22.7
Q ss_pred CeEEEEEecCcEEEEEEeCCcEEeec
Q 020891 115 TVLHYEFMQDYKVHLKHLDGHIEEVP 140 (320)
Q Consensus 115 ~V~~~~fR~~~~~~i~~~dG~~~~~~ 140 (320)
+|++++-.+++++.+++.||....++
T Consensus 5 kv~~V~~l~~y~L~v~F~dG~~~~~D 30 (84)
T d2auwa2 5 KLTAVEALAPYRLRTTWSTGEVLEVD 30 (84)
T ss_dssp CEEEEEECSTTEEEEEETTSCEEEEE
T ss_pred ceEEEEECCCcEEEEEEcCCCEEEEE
Confidence 58899999999999999999987653
No 10
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.82 E-value=1.9e+02 Score=21.79 Aligned_cols=69 Identities=10% Similarity=-0.017 Sum_probs=42.5
Q ss_pred HHHHHHHHcCCCEEEEEecccHHHHHHHHHHhcCccce--EEEcccCC--CCCCHHHHHHHHHHhCCCCCCeEEEE
Q 020891 49 NTLALVEAAGVKRLLFCGVGCQVQALRSVEHHLNLEKL--YVLGTNCV--DNGTREGLDKFLKAASSEPETVLHYE 120 (320)
Q Consensus 49 ~~l~ev~~~~~kkvafvGtPCQI~aLr~~~~~l~~~~l--~~Igl~C~--G~~s~~~~~~~L~~~~~~~~~V~~~~ 120 (320)
..++.++ + +-+++ +.|-++...++...+..|.... .++.--.. +-|+++.++..++.++.+++++..+.
T Consensus 116 ~~L~~L~-~-~~~l~-i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iG 188 (247)
T d2gfha1 116 AMLTELR-K-EVRLL-LLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG 188 (247)
T ss_dssp HHHHHHH-T-TSEEE-EEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHhh-c-ccceE-EeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcceec
Confidence 3444444 3 34443 4566777777776665665432 12222222 46788999999999999888766553
Done!