Query 020893
Match_columns 320
No_of_seqs 145 out of 334
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 05:59:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020893.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020893hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 1E-95 2E-100 695.5 12.0 287 29-317 36-322 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 1.2E-91 2.6E-96 684.2 25.2 283 29-317 14-297 (361)
3 PF00326 Peptidase_S9: Prolyl 95.5 0.019 4.2E-07 51.0 4.6 61 151-217 45-105 (213)
4 KOG1515 Arylacetamide deacetyl 95.4 0.085 1.8E-06 52.0 9.0 44 149-194 145-190 (336)
5 PRK10162 acetyl esterase; Prov 93.7 0.2 4.4E-06 48.1 7.2 44 151-194 132-178 (318)
6 PF10340 DUF2424: Protein of u 92.8 1 2.2E-05 45.2 10.5 109 53-193 107-218 (374)
7 PF00135 COesterase: Carboxyle 91.7 0.69 1.5E-05 46.4 8.1 80 150-236 185-269 (535)
8 PRK10115 protease 2; Provision 91.6 0.14 3.1E-06 54.7 3.2 36 151-186 505-540 (686)
9 PRK13604 luxD acyl transferase 91.4 1.2 2.5E-05 43.6 9.0 51 150-210 91-141 (307)
10 PRK10566 esterase; Provisional 91.2 0.43 9.4E-06 42.9 5.5 35 153-187 90-124 (249)
11 PF07859 Abhydrolase_3: alpha/ 90.1 0.52 1.1E-05 41.4 4.9 42 153-194 51-95 (211)
12 COG1506 DAP2 Dipeptidyl aminop 89.8 0.22 4.8E-06 52.5 2.7 109 152-276 455-563 (620)
13 PF01764 Lipase_3: Lipase (cla 89.1 1.2 2.6E-05 36.6 6.1 40 169-208 63-103 (140)
14 PRK05077 frsA fermentation/res 86.3 5.6 0.00012 39.9 10.1 34 153-186 248-281 (414)
15 TIGR01840 esterase_phb esteras 85.0 1.1 2.5E-05 39.9 4.0 37 152-188 77-113 (212)
16 PF12695 Abhydrolase_5: Alpha/ 84.5 0.99 2.1E-05 36.6 3.1 40 149-189 41-80 (145)
17 cd00312 Esterase_lipase Estera 84.4 1.2 2.7E-05 44.8 4.4 41 150-190 153-196 (493)
18 COG0657 Aes Esterase/lipase [L 84.2 1.9 4.1E-05 40.8 5.4 41 154-194 133-176 (312)
19 PF05677 DUF818: Chlamydia CHL 79.4 6.1 0.00013 39.4 6.9 53 154-209 198-254 (365)
20 PLN02408 phospholipase A1 78.8 6 0.00013 39.6 6.8 63 158-227 188-251 (365)
21 COG2939 Carboxypeptidase C (ca 78.6 22 0.00048 37.0 11.0 141 52-208 87-240 (498)
22 PF00756 Esterase: Putative es 77.8 2 4.4E-05 38.8 3.0 43 152-195 97-140 (251)
23 cd00707 Pancreat_lipase_like P 77.6 5.6 0.00012 37.6 6.0 58 153-213 95-152 (275)
24 TIGR02821 fghA_ester_D S-formy 74.4 3.5 7.6E-05 38.5 3.7 23 168-190 136-158 (275)
25 PLN02802 triacylglycerol lipas 74.3 8.9 0.00019 40.0 6.8 51 170-226 330-380 (509)
26 PF08840 BAAT_C: BAAT / Acyl-C 73.9 8.3 0.00018 35.0 5.9 55 153-211 5-59 (213)
27 cd00519 Lipase_3 Lipase (class 73.2 8.8 0.00019 34.7 5.9 39 169-208 127-165 (229)
28 PF10503 Esterase_phd: Esteras 73.0 4.4 9.6E-05 37.6 3.9 41 153-197 80-120 (220)
29 PF02230 Abhydrolase_2: Phosph 72.8 7.5 0.00016 34.8 5.3 36 153-189 89-124 (216)
30 KOG1282 Serine carboxypeptidas 72.4 19 0.0004 37.2 8.6 141 49-207 56-209 (454)
31 PF12242 Eno-Rase_NADH_b: NAD( 72.2 5.1 0.00011 31.6 3.5 45 151-200 20-66 (78)
32 COG3509 LpqC Poly(3-hydroxybut 71.8 12 0.00026 36.7 6.6 33 154-186 128-160 (312)
33 cd00741 Lipase Lipase. Lipase 70.8 9.5 0.00021 32.2 5.2 28 168-195 26-53 (153)
34 COG1770 PtrB Protease II [Amin 70.5 4 8.8E-05 43.7 3.4 33 150-182 507-539 (682)
35 PLN02454 triacylglycerol lipas 70.2 12 0.00027 38.0 6.6 64 157-227 215-281 (414)
36 TIGR01738 bioH putative pimelo 68.6 42 0.00092 28.5 8.9 50 154-210 52-101 (245)
37 cd07224 Pat_like Patatin-like 68.1 5.7 0.00012 36.8 3.5 32 157-189 17-48 (233)
38 PF03583 LIP: Secretory lipase 67.6 11 0.00024 36.0 5.5 48 165-213 66-115 (290)
39 PF00975 Thioesterase: Thioest 66.6 17 0.00037 32.1 6.2 52 153-207 51-102 (229)
40 PRK10439 enterobactin/ferric e 66.4 7.4 0.00016 39.2 4.2 36 154-189 266-307 (411)
41 cd07198 Patatin Patatin-like p 66.3 6.5 0.00014 34.2 3.4 31 156-189 15-45 (172)
42 KOG4627 Kynurenine formamidase 65.7 6 0.00013 37.2 3.1 32 158-190 125-156 (270)
43 PTZ00472 serine carboxypeptida 65.6 51 0.0011 33.8 10.1 40 154-194 154-195 (462)
44 PF00450 Peptidase_S10: Serine 65.4 43 0.00093 32.5 9.3 128 63-205 38-175 (415)
45 PF05728 UPF0227: Uncharacteri 64.6 13 0.00028 33.6 5.0 35 156-196 47-81 (187)
46 PHA02857 monoglyceride lipase; 64.6 41 0.00089 30.5 8.5 21 258-278 203-223 (276)
47 PLN02442 S-formylglutathione h 64.5 5.1 0.00011 37.8 2.5 22 168-189 141-162 (283)
48 TIGR03100 hydr1_PEP hydrolase, 63.3 10 0.00022 35.4 4.2 36 152-188 83-118 (274)
49 PLN03037 lipase class 3 family 61.5 21 0.00046 37.4 6.5 54 168-227 316-369 (525)
50 cd07222 Pat_PNPLA4 Patatin-lik 60.6 8.6 0.00019 35.9 3.2 32 157-188 17-49 (246)
51 PLN02298 hydrolase, alpha/beta 59.6 25 0.00055 33.2 6.3 36 152-187 116-151 (330)
52 KOG1209 1-Acyl dihydroxyaceton 59.0 11 0.00023 35.8 3.5 66 166-231 4-76 (289)
53 PF06028 DUF915: Alpha/beta hy 58.1 19 0.00042 34.1 5.2 61 149-213 84-146 (255)
54 PF01738 DLH: Dienelactone hyd 58.0 17 0.00037 32.3 4.6 38 151-188 79-116 (218)
55 TIGR03101 hydr2_PEP hydrolase, 57.5 22 0.00048 33.7 5.5 33 153-188 85-117 (266)
56 PF07819 PGAP1: PGAP1-like pro 56.9 14 0.00031 34.0 4.0 33 154-186 66-101 (225)
57 PF12697 Abhydrolase_6: Alpha/ 56.1 35 0.00075 28.4 6.0 37 170-210 66-102 (228)
58 COG2272 PnbA Carboxylesterase 56.0 11 0.00024 39.1 3.4 38 149-186 156-196 (491)
59 cd07218 Pat_iPLA2 Calcium-inde 55.8 12 0.00026 35.1 3.4 31 157-188 18-48 (245)
60 cd07204 Pat_PNPLA_like Patatin 55.8 12 0.00027 34.8 3.4 32 157-188 17-49 (243)
61 PRK11460 putative hydrolase; P 55.6 16 0.00034 33.4 4.0 34 154-187 87-120 (232)
62 PF12740 Chlorophyllase2: Chlo 55.4 14 0.0003 35.3 3.7 40 152-191 65-112 (259)
63 PF08237 PE-PPE: PE-PPE domain 55.0 40 0.00087 31.3 6.6 55 149-207 31-88 (225)
64 PLN02324 triacylglycerol lipas 53.6 35 0.00076 34.8 6.4 38 156-194 201-239 (415)
65 TIGR03712 acc_sec_asp2 accesso 53.4 5.6 0.00012 41.3 0.8 25 165-190 353-377 (511)
66 COG4814 Uncharacterized protei 52.9 14 0.00031 35.6 3.3 45 151-197 119-165 (288)
67 PRK05371 x-prolyl-dipeptidyl a 52.6 28 0.00061 38.1 6.0 36 151-186 305-354 (767)
68 PLN00021 chlorophyllase 52.5 17 0.00037 35.2 3.9 38 154-191 102-147 (313)
69 PRK14875 acetoin dehydrogenase 50.9 86 0.0019 29.6 8.4 18 259-276 309-326 (371)
70 COG0412 Dienelactone hydrolase 50.9 23 0.00049 32.9 4.3 41 151-191 93-133 (236)
71 PLN02211 methyl indole-3-aceta 50.7 41 0.00088 31.3 6.0 24 166-189 83-106 (273)
72 PRK10673 acyl-CoA esterase; Pr 49.9 33 0.00071 30.4 5.1 35 170-208 81-115 (255)
73 TIGR03695 menH_SHCHC 2-succiny 49.7 31 0.00068 29.2 4.7 23 168-190 68-90 (251)
74 PF03403 PAF-AH_p_II: Platelet 49.5 16 0.00035 36.4 3.3 17 169-185 227-243 (379)
75 PLN02310 triacylglycerol lipas 49.4 41 0.00089 34.2 6.2 39 169-208 208-246 (405)
76 KOG1516 Carboxylesterase and r 48.1 24 0.00051 36.2 4.3 35 153-187 175-212 (545)
77 PLN02965 Probable pheophorbida 46.5 40 0.00087 30.4 5.2 34 170-207 72-105 (255)
78 PRK10349 carboxylesterase BioH 46.5 44 0.00096 29.9 5.5 47 156-209 63-109 (256)
79 TIGR00976 /NonD putative hydro 45.5 27 0.00058 36.2 4.3 36 152-188 80-115 (550)
80 TIGR03056 bchO_mg_che_rel puta 45.0 48 0.001 29.5 5.4 35 169-207 94-128 (278)
81 KOG4569 Predicted lipase [Lipi 44.8 49 0.0011 32.4 5.8 68 153-228 156-224 (336)
82 cd07207 Pat_ExoU_VipD_like Exo 44.4 26 0.00056 30.6 3.5 30 156-188 16-45 (194)
83 KOG3101 Esterase D [General fu 44.4 10 0.00023 35.8 1.0 19 168-186 139-157 (283)
84 KOG2237 Predicted serine prote 44.3 19 0.00042 38.7 3.0 34 150-183 529-562 (712)
85 TIGR03230 lipo_lipase lipoprot 44.0 45 0.00097 34.3 5.5 55 153-212 102-158 (442)
86 TIGR03611 RutD pyrimidine util 42.6 35 0.00076 29.5 4.0 21 258-278 192-212 (257)
87 PLN02571 triacylglycerol lipas 42.5 43 0.00093 34.2 5.1 24 171-194 227-250 (413)
88 TIGR02240 PHA_depoly_arom poly 42.4 37 0.0008 31.0 4.3 21 258-278 201-221 (276)
89 PLN00413 triacylglycerol lipas 42.0 35 0.00077 35.4 4.4 35 157-193 273-307 (479)
90 PLN02209 serine carboxypeptida 41.4 2.7E+02 0.0059 28.4 10.7 120 63-194 66-191 (437)
91 PLN02719 triacylglycerol lipas 40.2 47 0.001 34.9 5.0 26 169-194 297-322 (518)
92 PF01734 Patatin: Patatin-like 39.8 22 0.00047 29.6 2.2 19 171-189 28-46 (204)
93 cd07220 Pat_PNPLA2 Patatin-lik 39.7 31 0.00068 32.5 3.4 31 157-187 22-53 (249)
94 PRK15231 fimbrial adhesin prot 39.7 53 0.0012 28.9 4.5 62 49-118 78-139 (150)
95 PLN02894 hydrolase, alpha/beta 39.2 78 0.0017 31.5 6.3 21 169-189 175-195 (402)
96 PLN02753 triacylglycerol lipas 38.9 51 0.0011 34.7 5.0 26 169-194 311-336 (531)
97 PLN02824 hydrolase, alpha/beta 38.9 79 0.0017 29.1 6.0 22 257-278 227-248 (294)
98 cd07230 Pat_TGL4-5_like Triacy 38.8 34 0.00073 34.8 3.7 31 156-189 90-120 (421)
99 TIGR03739 PRTRC_D PRTRC system 38.5 60 0.0013 31.2 5.2 34 167-206 272-305 (320)
100 PF06500 DUF1100: Alpha/beta h 38.4 38 0.00083 34.5 4.0 34 152-185 243-276 (411)
101 PRK00870 haloalkane dehalogena 38.4 84 0.0018 29.1 6.1 37 169-209 114-150 (302)
102 PF05057 DUF676: Putative seri 38.3 31 0.00067 31.3 3.1 46 145-191 54-99 (217)
103 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.7 45 0.00098 28.8 3.8 31 155-188 16-46 (175)
104 PRK04940 hypothetical protein; 36.0 67 0.0015 29.1 4.8 23 170-196 60-82 (180)
105 PLN02733 phosphatidylcholine-s 35.9 54 0.0012 33.6 4.7 34 153-188 147-180 (440)
106 cd07210 Pat_hypo_W_succinogene 35.1 44 0.00095 30.6 3.6 30 156-188 17-46 (221)
107 PLN02934 triacylglycerol lipas 35.0 61 0.0013 34.0 4.9 38 154-193 307-344 (515)
108 PLN02162 triacylglycerol lipas 34.6 68 0.0015 33.4 5.1 125 65-193 163-301 (475)
109 cd07228 Pat_NTE_like_bacteria 34.6 52 0.0011 28.6 3.8 29 156-187 17-45 (175)
110 TIGR02427 protocat_pcaD 3-oxoa 34.5 59 0.0013 27.6 4.1 21 258-278 187-207 (251)
111 COG1752 RssA Predicted esteras 34.5 40 0.00086 32.2 3.3 30 157-189 29-58 (306)
112 KOG2183 Prolylcarboxypeptidase 34.3 54 0.0012 33.8 4.2 50 144-197 134-190 (492)
113 KOG4409 Predicted hydrolase/ac 33.5 81 0.0018 31.7 5.3 51 154-211 147-197 (365)
114 PF00151 Lipase: Lipase; Inte 32.9 83 0.0018 30.9 5.3 89 118-215 103-194 (331)
115 cd07390 MPP_AQ1575 Aquifex aeo 32.6 45 0.00097 28.9 3.1 53 127-180 2-54 (168)
116 COG1075 LipA Predicted acetylt 32.3 1E+02 0.0022 30.1 5.8 41 145-188 105-145 (336)
117 PRK10749 lysophospholipase L2; 32.0 1.4E+02 0.0029 28.5 6.5 21 169-189 130-150 (330)
118 TIGR01392 homoserO_Ac_trn homo 30.9 89 0.0019 30.0 5.1 37 170-210 126-163 (351)
119 PF05448 AXE1: Acetyl xylan es 30.9 48 0.0011 32.3 3.3 117 144-276 148-274 (320)
120 PF05577 Peptidase_S28: Serine 30.4 1.2E+02 0.0025 30.3 6.0 45 168-217 111-155 (434)
121 cd01819 Patatin_and_cPLA2 Pata 30.3 65 0.0014 27.6 3.7 33 155-188 14-46 (155)
122 cd07209 Pat_hypo_Ecoli_Z1214_l 30.3 56 0.0012 29.6 3.4 28 157-187 16-43 (215)
123 KOG3724 Negative regulator of 30.3 1.3E+02 0.0028 33.6 6.5 66 166-234 178-243 (973)
124 cd07225 Pat_PNPLA6_PNPLA7 Pata 30.0 55 0.0012 31.7 3.5 31 156-189 32-62 (306)
125 PLN02847 triacylglycerol lipas 30.0 1E+02 0.0022 33.2 5.6 35 170-205 251-287 (633)
126 PF03575 Peptidase_S51: Peptid 29.6 53 0.0011 28.1 3.0 11 172-182 70-80 (154)
127 TIGR03343 biphenyl_bphD 2-hydr 29.5 68 0.0015 28.9 3.8 22 168-189 99-120 (282)
128 PLN02761 lipase class 3 family 29.5 93 0.002 32.8 5.2 25 170-194 294-318 (527)
129 cd07386 MPP_DNA_pol_II_small_a 29.4 1.8E+02 0.004 26.5 6.7 32 150-181 15-48 (243)
130 KOG1552 Predicted alpha/beta h 29.4 86 0.0019 30.1 4.5 93 151-276 112-204 (258)
131 COG0627 Predicted esterase [Ge 29.4 51 0.0011 32.3 3.1 35 171-210 153-187 (316)
132 PF09752 DUF2048: Uncharacteri 29.1 1E+02 0.0023 30.8 5.2 44 155-205 163-207 (348)
133 cd07208 Pat_hypo_Ecoli_yjju_li 28.9 60 0.0013 30.1 3.4 30 156-187 15-44 (266)
134 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.8 64 0.0014 31.5 3.7 29 157-188 87-115 (298)
135 PF06821 Ser_hydrolase: Serine 28.8 1.5E+02 0.0032 26.1 5.7 35 152-189 40-74 (171)
136 PF04631 Baculo_44: Baculoviru 28.6 32 0.0007 34.4 1.6 50 43-97 94-149 (371)
137 PF01083 Cutinase: Cutinase; 28.1 2E+02 0.0043 25.4 6.5 40 149-190 62-101 (179)
138 PF00091 Tubulin: Tubulin/FtsZ 28.1 1.4E+02 0.0031 26.9 5.7 48 150-197 103-155 (216)
139 PRK10279 hypothetical protein; 28.0 62 0.0014 31.3 3.4 29 157-188 23-51 (300)
140 PF12715 Abhydrolase_7: Abhydr 27.9 61 0.0013 32.9 3.4 56 148-210 202-259 (390)
141 COG4099 Predicted peptidase [G 27.5 70 0.0015 31.8 3.6 44 152-195 251-294 (387)
142 TIGR01836 PHA_synth_III_C poly 27.4 65 0.0014 31.0 3.5 34 153-188 121-154 (350)
143 PRK04123 ribulokinase; Provisi 27.4 1.2E+02 0.0025 31.5 5.5 72 121-201 378-469 (548)
144 cd07231 Pat_SDP1-like Sugar-De 26.8 74 0.0016 31.5 3.7 30 157-189 86-115 (323)
145 PRK10985 putative hydrolase; P 26.7 81 0.0018 30.0 4.0 33 152-186 115-147 (324)
146 PLN02578 hydrolase 26.2 1.3E+02 0.0028 29.0 5.3 21 258-278 290-310 (354)
147 PRK11071 esterase YqiA; Provis 26.2 1E+02 0.0022 27.2 4.3 33 154-188 47-79 (190)
148 KOG4391 Predicted alpha/beta h 25.6 29 0.00063 33.0 0.7 43 153-195 132-174 (300)
149 CHL00024 psbI photosystem II p 25.4 39 0.00086 22.8 1.1 12 104-115 21-32 (36)
150 PRK02655 psbI photosystem II r 25.3 40 0.00086 23.0 1.1 13 104-116 21-33 (38)
151 PRK13917 plasmid segregation p 25.1 1.6E+02 0.0034 28.9 5.7 27 166-197 289-315 (344)
152 COG0031 CysK Cysteine synthase 25.1 85 0.0019 30.7 3.8 57 145-209 238-295 (300)
153 PRK15222 putative pilin struct 25.0 1.1E+02 0.0024 27.2 4.1 63 48-117 78-141 (156)
154 PF00561 Abhydrolase_1: alpha/ 24.8 1.2E+02 0.0026 25.8 4.3 34 154-189 30-63 (230)
155 PLN02385 hydrolase; alpha/beta 24.7 1.1E+02 0.0023 29.4 4.4 18 259-276 274-291 (349)
156 PF11288 DUF3089: Protein of u 24.7 94 0.002 28.8 3.8 34 150-184 76-109 (207)
157 PF04260 DUF436: Protein of un 24.7 66 0.0014 29.0 2.7 26 154-179 3-28 (172)
158 COG4947 Uncharacterized protei 24.5 40 0.00087 31.0 1.3 22 171-196 102-123 (227)
159 TIGR01250 pro_imino_pep_2 prol 24.3 1.9E+02 0.004 25.3 5.6 19 258-276 225-243 (288)
160 PF10081 Abhydrolase_9: Alpha/ 24.2 1.1E+02 0.0025 29.8 4.4 59 150-217 89-149 (289)
161 PRK03592 haloalkane dehalogena 23.7 2.1E+02 0.0046 26.2 6.1 34 170-207 93-126 (295)
162 PLN02872 triacylglycerol lipas 23.6 1.2E+02 0.0025 30.6 4.5 34 149-185 142-175 (395)
163 PF02450 LCAT: Lecithin:choles 23.4 1E+02 0.0022 30.7 4.1 37 152-191 104-140 (389)
164 COG2382 Fes Enterochelin ester 23.2 1.1E+02 0.0024 29.9 4.2 65 147-216 148-218 (299)
165 KOG2564 Predicted acetyltransf 23.2 67 0.0015 31.6 2.6 39 154-197 133-171 (343)
166 PF11187 DUF2974: Protein of u 23.0 1.8E+02 0.004 26.8 5.5 38 153-193 70-107 (224)
167 cd07232 Pat_PLPL Patain-like p 22.6 89 0.0019 31.6 3.5 31 156-189 84-114 (407)
168 cd07227 Pat_Fungal_NTE1 Fungal 22.5 94 0.002 29.7 3.5 30 157-189 28-57 (269)
169 COG0596 MhpC Predicted hydrola 22.1 1.9E+02 0.0042 23.8 5.0 18 258-275 215-232 (282)
170 KOG1553 Predicted alpha/beta h 22.0 1.8E+02 0.0039 29.6 5.4 55 148-209 289-344 (517)
171 PF08538 DUF1749: Protein of u 22.0 1.2E+02 0.0025 29.9 4.0 67 119-193 63-131 (303)
172 PRK03204 haloalkane dehalogena 21.7 1.6E+02 0.0035 27.3 4.9 49 154-208 87-135 (286)
173 cd07221 Pat_PNPLA3 Patatin-lik 21.7 94 0.002 29.3 3.3 32 157-188 18-50 (252)
174 cd07213 Pat17_PNPLA8_PNPLA9_li 21.1 1.3E+02 0.0028 28.5 4.2 38 149-188 13-52 (288)
175 cd07229 Pat_TGL3_like Triacylg 21.1 1E+02 0.0022 31.2 3.6 30 157-189 101-130 (391)
176 PRK13690 hypothetical protein; 21.1 1.1E+02 0.0024 27.9 3.4 28 152-179 8-35 (184)
177 PRK05579 bifunctional phosphop 21.0 1.9E+02 0.0041 29.3 5.4 78 118-205 143-235 (399)
178 PLN03016 sinapoylglucose-malat 20.9 4.6E+02 0.0099 26.8 8.2 119 63-193 64-188 (433)
179 KOG2984 Predicted hydrolase [G 20.8 1.3E+02 0.0028 28.6 3.8 20 257-276 209-228 (277)
180 COG1505 Serine proteases of th 20.3 47 0.001 35.6 1.0 35 148-182 478-512 (648)
181 PLN02652 hydrolase; alpha/beta 20.1 1.4E+02 0.0031 29.8 4.3 34 153-188 193-226 (395)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1e-95 Score=695.47 Aligned_cols=287 Identities=59% Similarity=1.097 Sum_probs=280.5
Q ss_pred ceeeeEEEecCCCCCCccCCCCCCceEEeecCCCCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccC
Q 020893 29 LEVKMTLVQNASVHGAFCLDGSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILS 108 (320)
Q Consensus 29 ~~~~l~ll~~a~~~gA~ClDGSp~~yy~~~g~G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils 108 (320)
+.|+||+|+.|.++||+|||||+||||+.+|+|+|+++|||+|||||||.+..+|..|..|.+|||++|++++.|.||||
T Consensus 36 ~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~GSS~~mek~~~FtGILS 115 (402)
T KOG4287|consen 36 LMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLGSSNYMEKELAFTGILS 115 (402)
T ss_pred ccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhccccccccchhhcceeEEec
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccEEEEecCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 109 NNASLNPDFYNWNRVKIRYCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 109 ~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
+++++||||+|||+|+||||||++|+|+.+.... ++++|||.+||+|||++|+.+||.+|++.||+||||||+|+++|+
T Consensus 116 ~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~-t~l~fRG~rIw~av~~eLl~kGms~Ak~alLsGcSAGGLa~iLhC 194 (402)
T KOG4287|consen 116 NKPSENPDFYNWNRVKVRYCDGASFSGDSENKNA-TQLQFRGARIWLAVMDELLAKGMSNAKQALLSGCSAGGLASILHC 194 (402)
T ss_pred CCcccCCcccccceeEEeecCCCcccCcccccch-hhhhhhHHHHHHHHHHHHHHhhhhHHHHHHhhcCCccchhheeeh
Confidence 9999999999999999999999999998774333 399999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHHHHHHhhcccccccchhhhcCCCCcccccchhhhhccCCCeE
Q 020893 189 DEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIVELQGVEQNLDKNCTKSLYIPELCFFPQYALRYITTPFF 268 (320)
Q Consensus 189 d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~kC~f~q~~~~~i~tP~F 268 (320)
|++|+.||++++|+|++|||||||..|++|...++.+|.+++.+|++.++||+.|++.+ +||+|||||++++.|+||+|
T Consensus 195 D~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~-~p~~CfFpq~v~~~irtP~F 273 (402)
T KOG4287|consen 195 DEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHL-EPSLCFFPQYVLKTIRTPVF 273 (402)
T ss_pred HHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcC-CchhhcchHHHHhhcCCceE
Confidence 99999999999999999999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred EeecchhHhhhhhccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhc
Q 020893 269 ILNSAYDVFQFHHILVPPSADPRGHWNRCKLNPAACNAHQIDVLQGVTC 317 (320)
Q Consensus 269 iv~s~YD~wQl~nil~~~~~~~~~~w~~C~~~~~~C~~~q~~~lq~fr~ 317 (320)
++|++||+|||++.|+|+++||.|.|.+|++|...|++.||+++|+||.
T Consensus 274 ~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~ 322 (402)
T KOG4287|consen 274 LVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRP 322 (402)
T ss_pred ehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999995
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=1.2e-91 Score=684.17 Aligned_cols=283 Identities=50% Similarity=0.937 Sum_probs=272.4
Q ss_pred ceeeeEEEecCCCCCCccCCCCCCceEEeecCCCCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccC
Q 020893 29 LEVKMTLVQNASVHGAFCLDGSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILS 108 (320)
Q Consensus 29 ~~~~l~ll~~a~~~gA~ClDGSp~~yy~~~g~G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils 108 (320)
+.|+||+|++|++++|+|+||||++||+|+|+|++++||||||||||||||.++|..|+.|.+|||+.|++++.+.|||+
T Consensus 14 ~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils 93 (361)
T PF03283_consen 14 DEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILS 93 (361)
T ss_pred cccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhcccccccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccEEEEecCCCcccCCCCcc-ccCCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 109 NNASLNPDFYNWNRVKIRYCDGASFAGNAKF-DNGTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 109 ~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~-~~~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
+++++||+|+|||+|||||||||+|+|+++. .+++.++||||++|++|||+||+++||++|++|||+||||||+||++|
T Consensus 94 ~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~ 173 (361)
T PF03283_consen 94 NDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILH 173 (361)
T ss_pred CCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHH
Confidence 9999999999999999999999999998774 467889999999999999999999889999999999999999999999
Q ss_pred hHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHHHHHHhhcccccccchhhhcCCCCcccccchhhhhccCCCe
Q 020893 188 CDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIVELQGVEQNLDKNCTKSLYIPELCFFPQYALRYITTPF 267 (320)
Q Consensus 188 ~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~kC~f~q~~~~~i~tP~ 267 (320)
+|+||++||+.++|++++|||||+|.++++|...++.++.+++++|++...+|++|.+.+ ++. ||||||++|+|+||+
T Consensus 174 ~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~-~~~-C~f~q~~~~~I~tPl 251 (361)
T PF03283_consen 174 ADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQY-DPE-CFFPQYLYPYIKTPL 251 (361)
T ss_pred HHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhcc-Ccc-ccchHHHHhhcCcce
Confidence 999999999889999999999999999999999999999999999999999999999876 444 999999999999999
Q ss_pred EEeecchhHhhhhhccCCCCCCCCCcccccccCCCCCCHHHHHHHHhhhc
Q 020893 268 FILNSAYDVFQFHHILVPPSADPRGHWNRCKLNPAACNAHQIDVLQGVTC 317 (320)
Q Consensus 268 Fiv~s~YD~wQl~nil~~~~~~~~~~w~~C~~~~~~C~~~q~~~lq~fr~ 317 (320)
||+||+||+|||+|+|+|+. +.|.+|+.++..|+++|+++||+||+
T Consensus 252 Fivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~ 297 (361)
T PF03283_consen 252 FIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRS 297 (361)
T ss_pred eeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999964 99999999999999999999999985
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.47 E-value=0.019 Score=50.99 Aligned_cols=61 Identities=20% Similarity=0.162 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCc
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDIS 217 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~ 217 (320)
..-+.+++++|.++..-++++|.+.|.|+||+.|.+-+- ..|...+ .+++.+|+ .|.....
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~----~~~~~f~-a~v~~~g~-~d~~~~~ 105 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT----QHPDRFK-AAVAGAGV-SDLFSYY 105 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH----HTCCGSS-EEEEESE--SSTTCSB
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhc----ccceeee-eeecccee-cchhccc
Confidence 344677788998877779999999999999999887554 2343211 23455554 4554443
No 4
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.36 E-value=0.085 Score=51.97 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=30.9
Q ss_pred eHHHHHHHHHH--HHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 149 RGQKIWEAIIL--DLLPKGLANARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 149 rG~~n~~avl~--~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
-|-.-++-+++ |+. --.+.++|+|+|.||||--|..=+.++++-
T Consensus 145 D~~~Al~w~~~~~~~~--~~~D~~rv~l~GDSaGGNia~~va~r~~~~ 190 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLK--LGADPSRVFLAGDSAGGNIAHVVAQRAADE 190 (336)
T ss_pred HHHHHHHHHHHhHHHH--hCCCcccEEEEccCccHHHHHHHHHHHhhc
Confidence 34444455555 332 245778899999999999888888888863
No 5
>PRK10162 acetyl esterase; Provisional
Probab=93.73 E-value=0.2 Score=48.08 Aligned_cols=44 Identities=14% Similarity=0.062 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhc--CCC-ccceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 151 QKIWEAIILDLLPK--GLA-NARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 151 ~~n~~avl~~L~~~--~l~-~a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
..-..++++|+.++ .+. ++++|+|.|.||||.-++.-+-.+++.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 34567778888652 233 578999999999999988877777654
No 6
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=92.75 E-value=1 Score=45.19 Aligned_cols=109 Identities=17% Similarity=0.168 Sum_probs=61.4
Q ss_pred ceEEeec-C--CCCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcccccEEEEecCC
Q 020893 53 AYHLHRG-F--GAGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFYNWNRVKIRYCD 129 (320)
Q Consensus 53 ~yy~~~g-~--G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCd 129 (320)
+|++.+. . ...++.+||||=|||++-....+.-.... ...-.|. +-.++.+-|=-
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~------------~i~~~l~----------~~SILvLDYsL 164 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLL------------NIYKLLP----------EVSILVLDYSL 164 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHH------------HHHHHcC----------CCeEEEEeccc
Confidence 4777763 2 13468999999999999876654332110 0111121 01555666632
Q ss_pred CcccCCCCccccCCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 130 GASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 130 Gd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
-.+ +.....++ .+ -.-+-++.++|.+. ...++|+|.|.||||--++--..+++.
T Consensus 165 t~~--~~~~~~yP-tQ-----L~qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 165 TSS--DEHGHKYP-TQ-----LRQLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred ccc--ccCCCcCc-hH-----HHHHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 210 00111122 11 12244556677731 235789999999999988887888876
No 7
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.67 E-value=0.69 Score=46.37 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhhc--CCC-ccceeEEeeeChhhHHHHhhhHHHH--hhCCCCceEEEeccccccccCCCCchhHHHHH
Q 020893 150 GQKIWEAIILDLLPK--GLA-NARKALLSGCSAGGLATFLHCDEFT--KYLPNNASVKCLSDAGFFLDERDISLNHTMRS 224 (320)
Q Consensus 150 G~~n~~avl~~L~~~--~l~-~a~~vllsG~SAGGlga~l~~d~v~--~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~ 224 (320)
|-.-.+++|+|..++ .|+ ++++|.|.|.||||..+.+|.-.=. .++. ++|.-||-.+......... +.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~-----raI~~SGs~~~~~~~~~~~--~~ 257 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH-----RAILQSGSALSPWATSENP--EQ 257 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS-----EEEEES--TTSTTSSBSHH--HH
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccc-----ccccccccccccccccccc--ch
Confidence 555677889999873 566 7999999999999999888766511 2232 4566677444333332222 33
Q ss_pred HHHHHHHhhccc
Q 020893 225 LYKEIVELQGVE 236 (320)
Q Consensus 225 ~~~~~~~~~~~~ 236 (320)
.+..+.+.-++.
T Consensus 258 ~~~~la~~lgc~ 269 (535)
T PF00135_consen 258 QAQKLAKALGCD 269 (535)
T ss_dssp HHHHHHHHTTST
T ss_pred hhhhhhhhhccc
Confidence 444455444443
No 8
>PRK10115 protease 2; Provisional
Probab=91.59 E-value=0.14 Score=54.73 Aligned_cols=36 Identities=22% Similarity=0.143 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHh
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFL 186 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l 186 (320)
..-+.++.++|.++|+-++++|.+.|.||||+-+..
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~ 540 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV 540 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHH
Confidence 456778889999999999999999999999986543
No 9
>PRK13604 luxD acyl transferase; Provisional
Probab=91.39 E-value=1.2 Score=43.56 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 150 GQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 150 G~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
|..-+.++++||+++ ..+++.|.|+|.||.-+++-+. .-+ ++ .++.|||+.
T Consensus 91 g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~~--v~-~lI~~sp~~ 141 (307)
T PRK13604 91 GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EID--LS-FLITAVGVV 141 (307)
T ss_pred cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CCC--CC-EEEEcCCcc
Confidence 578899999999874 3467999999999988655332 111 22 267888875
No 10
>PRK10566 esterase; Provisional
Probab=91.15 E-value=0.43 Score=42.92 Aligned_cols=35 Identities=14% Similarity=0.249 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
-+.+++++|.+++.-+.++|.|.|.|+||+-++.-
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 34567788776555578999999999999998854
No 11
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=90.06 E-value=0.52 Score=41.39 Aligned_cols=42 Identities=24% Similarity=0.139 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhc--CC-CccceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 153 IWEAIILDLLPK--GL-ANARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 153 n~~avl~~L~~~--~l-~~a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
-+.++++|++++ .+ -++++|+|+|.||||.=++.-+-..++.
T Consensus 51 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 51 DVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred ccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh
Confidence 466778888863 11 3588999999999999888888777775
No 12
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=89.81 E-value=0.22 Score=52.52 Aligned_cols=109 Identities=17% Similarity=0.063 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHHHHHH
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIVE 231 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~ 231 (320)
+-+.+.+++|.+.++-++++|.++|.|.||+-|++-.-.-- .+ ..+++.+|.--+...... ... .++...-.
T Consensus 455 ~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f-----~a~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 526 (620)
T COG1506 455 EDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RF-----KAAVAVAGGVDWLLYFGE-STE-GLRFDPEE 526 (620)
T ss_pred HHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hh-----heEEeccCcchhhhhccc-cch-hhcCCHHH
Confidence 44566677776677888889999999999999876433222 22 123344432111111110 000 00000000
Q ss_pred hhcccccccchhhhcCCCCcccccchhhhhccCCCeEEeecchhH
Q 020893 232 LQGVEQNLDKNCTKSLYIPELCFFPQYALRYITTPFFILNSAYDV 276 (320)
Q Consensus 232 ~~~~~~~lp~~C~~~~~~~~kC~f~q~~~~~i~tP~Fiv~s~YD~ 276 (320)
.. .. +.. . .+...=.-|-.-.+.|++|++|||+..|.
T Consensus 527 ~~---~~-~~~-~---~~~~~~~sp~~~~~~i~~P~LliHG~~D~ 563 (620)
T COG1506 527 NG---GG-PPE-D---REKYEDRSPIFYADNIKTPLLLIHGEEDD 563 (620)
T ss_pred hC---CC-ccc-C---hHHHHhcChhhhhcccCCCEEEEeecCCc
Confidence 00 00 110 0 01223445667789999999999999885
No 13
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.14 E-value=1.2 Score=36.65 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=25.3
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhhCC-CCceEEEecccc
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKYLP-NNASVKCLSDAG 208 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~lp-~~a~v~~l~DSG 208 (320)
..+|+++|+|-||.=|.+-+-++.+..+ ...++++++=+.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~ 103 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA 103 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC
Confidence 3789999999999755555555555443 234566665444
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=86.32 E-value=5.6 Score=39.95 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFL 186 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l 186 (320)
..++++++|.....-+.++|.+.|.|.||+-++.
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~ 281 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVR 281 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHH
Confidence 3478999987643336789999999999987764
No 15
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=84.98 E-value=1.1 Score=39.93 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
..++.+++++.++.--++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4467788888764333567999999999999876644
No 16
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=84.53 E-value=0.99 Score=36.59 Aligned_cols=40 Identities=23% Similarity=0.369 Sum_probs=29.6
Q ss_pred eHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 149 RGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
.+...++.+++++.. ...++++|+|.|.|+||..+..-+.
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 344478888888753 2238899999999999997766444
No 17
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=84.40 E-value=1.2 Score=44.83 Aligned_cols=41 Identities=20% Similarity=0.127 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhc--CC-CccceeEEeeeChhhHHHHhhhHH
Q 020893 150 GQKIWEAIILDLLPK--GL-ANARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 150 G~~n~~avl~~L~~~--~l-~~a~~vllsG~SAGGlga~l~~d~ 190 (320)
|..-..++|+|+.++ .+ .++++|.|.|.||||..+.++.-.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 566788889998863 23 489999999999999888776543
No 18
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=84.22 E-value=1.9 Score=40.77 Aligned_cols=41 Identities=20% Similarity=0.094 Sum_probs=33.5
Q ss_pred HHHHHHHHhhcC--CC-ccceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 154 WEAIILDLLPKG--LA-NARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 154 ~~avl~~L~~~~--l~-~a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
+.+++.|+.++. ++ ++++|+|+|+||||.=+..-+...++.
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 567778887532 33 589999999999999999999999986
No 19
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=79.43 E-value=6.1 Score=39.44 Aligned_cols=53 Identities=23% Similarity=0.275 Sum_probs=36.0
Q ss_pred HHHHHHHHhhc-CCCccceeEEeeeChhhHHHHhhhHHHHhh-CC--CCceEEEeccccc
Q 020893 154 WEAIILDLLPK-GLANARKALLSGCSAGGLATFLHCDEFTKY-LP--NNASVKCLSDAGF 209 (320)
Q Consensus 154 ~~avl~~L~~~-~l~~a~~vllsG~SAGGlga~l~~d~v~~~-lp--~~a~v~~l~DSG~ 209 (320)
.+|++++|.++ .=.+|+++++-|.|-||.=+- ..+.+. +. .+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa---~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA---EALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHH---HHHHhcccccCCCeeEEEEecCCc
Confidence 46788888763 335899999999999985322 233332 21 2577778888876
No 20
>PLN02408 phospholipase A1
Probab=78.83 E-value=6 Score=39.63 Aligned_cols=63 Identities=19% Similarity=0.217 Sum_probs=40.5
Q ss_pred HHHHhhcCCCc-cceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHH
Q 020893 158 ILDLLPKGLAN-ARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYK 227 (320)
Q Consensus 158 l~~L~~~~l~~-a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~ 227 (320)
|..|++ ..++ ...|+++|+|-||-=|.+.+.+++..++....|.++.=++ +--|+..+.+.+.
T Consensus 188 I~~ll~-~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGs------PRVGN~~Fa~~~~ 251 (365)
T PLN02408 188 IARLLQ-SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGG------PRVGNRSFRRQLE 251 (365)
T ss_pred HHHHHH-hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCC------CCcccHHHHHHHH
Confidence 344444 2343 3479999999999999999999998876432355555333 3345555555554
No 21
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=78.60 E-value=22 Score=37.01 Aligned_cols=141 Identities=18% Similarity=0.142 Sum_probs=79.5
Q ss_pred CceEEeecC-CCCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcc--cccEEEE--e
Q 020893 52 PAYHLHRGF-GAGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFY--NWNRVKI--R 126 (320)
Q Consensus 52 ~~yy~~~g~-G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--p 126 (320)
+-||...+. ..-++-+++.|.||=-|-+..==. ..+|-+ .+.++ . ++....||.=+ +-++||| |
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l----~elGP~-----rI~~~-~-~P~~~~NP~SW~~~adLvFiDqP 155 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLL----GELGPK-----RIQSG-T-SPSYPDNPGSWLDFADLVFIDQP 155 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhh----hhcCCe-----eeeCC-C-CCCCCCCccccccCCceEEEecC
Confidence 345666553 123578999999998887654211 123322 12211 1 33334699322 3578999 5
Q ss_pred cCCCcccC-CCCcccc---CCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhh---CCCCc
Q 020893 127 YCDGASFA-GNAKFDN---GTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKY---LPNNA 199 (320)
Q Consensus 127 YCdGd~~~-G~~~~~~---~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~---lp~~a 199 (320)
-=||-+.+ |+....+ -+.-+ +..++-+++++-+ -.....+.+|+|.|-||.=...-+..|.+. +...+
T Consensus 156 vGTGfS~a~~~e~~~d~~~~~~D~----~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~ 230 (498)
T COG2939 156 VGTGFSRALGDEKKKDFEGAGKDV----YSFLRLFFDKFPH-YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNV 230 (498)
T ss_pred cccCcccccccccccchhccchhH----HHHHHHHHHHHHH-HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCce
Confidence 66666665 3222111 01111 3345666666654 455567899999999998777777777764 33345
Q ss_pred eEEEecc-cc
Q 020893 200 SVKCLSD-AG 208 (320)
Q Consensus 200 ~v~~l~D-SG 208 (320)
.+..+.+ +|
T Consensus 231 nlssvligng 240 (498)
T COG2939 231 NLSSVLIGNG 240 (498)
T ss_pred EeeeeeecCC
Confidence 5555554 45
No 22
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=77.82 E-value=2 Score=38.76 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCCCccce-eEEeeeChhhHHHHhhhHHHHhhC
Q 020893 152 KIWEAIILDLLPKGLANARK-ALLSGCSAGGLATFLHCDEFTKYL 195 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~-vllsG~SAGGlga~l~~d~v~~~l 195 (320)
-+.+.++.++.+ .++.... ..|+|+|.||++|+..+-+--+.+
T Consensus 97 ~l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 97 FLTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred ehhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 355566666554 4553333 999999999999997554333344
No 23
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=77.62 E-value=5.6 Score=37.60 Aligned_cols=58 Identities=16% Similarity=0.086 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccC
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDE 213 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~ 213 (320)
.+.++|+.|.++.-...++|.|.|+|.||.-+.+-+.++.+++. ++.+|.=+|.++..
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~---~iv~LDPa~p~f~~ 152 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLG---RITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccc---eeEEecCCcccccC
Confidence 34556666665311246789999999999988877665554432 45555546665543
No 24
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=74.45 E-value=3.5 Score=38.48 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=19.4
Q ss_pred ccceeEEeeeChhhHHHHhhhHH
Q 020893 168 NARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d~ 190 (320)
+.+++.|+|+|+||+.++..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999999887654
No 25
>PLN02802 triacylglycerol lipase
Probab=74.28 E-value=8.9 Score=40.01 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=36.0
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHH
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLY 226 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~ 226 (320)
.+|+|||+|-||-=|.+.+.+|+...+....|.++.=++ +--|+..+.+.+
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~ 380 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG------PRVGNRAFADRL 380 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC------CCcccHHHHHHH
Confidence 479999999999999999999998876533455555333 334555555544
No 26
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=73.86 E-value=8.3 Score=35.03 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=36.9
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccc
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFL 211 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fl 211 (320)
-++.+++||.++..-++++|-|.|.|-||--|++ ++..+|.-..|..++.|++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 3688999998754456789999999999998887 455677433466667776654
No 27
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=73.22 E-value=8.8 Score=34.65 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=28.6
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccc
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAG 208 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG 208 (320)
..+|+|+|+|-||.=|.+.+-+++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4579999999999988888888887763 24455555333
No 28
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=73.03 E-value=4.4 Score=37.56 Aligned_cols=41 Identities=15% Similarity=0.277 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCC
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN 197 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~ 197 (320)
.+.++++++..+.--++++|.++|.|+||.-+.. +.-.+|.
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~----la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANV----LACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHH----HHHhCCc
Confidence 4778888888644448899999999999976643 4445664
No 29
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=72.83 E-value=7.5 Score=34.79 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
.+.++|+.+.+++ -.+++|+|.|.|-||.-++.-+=
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l 124 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLAL 124 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHH
Confidence 3556666665544 56789999999999988876543
No 30
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=72.40 E-value=19 Score=37.17 Aligned_cols=141 Identities=18% Similarity=0.196 Sum_probs=85.5
Q ss_pred CCCCceEEeecCC-CCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcccc----cEE
Q 020893 49 GSLPAYHLHRGFG-AGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFYNW----NRV 123 (320)
Q Consensus 49 GSp~~yy~~~g~G-~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~nw----N~V 123 (320)
|..--||+-+..- ..++-+||.|.||=-|-+..- ....+|-.. ....|- .-..|| +.| |++
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G----~~~E~GPf~-----v~~~G~---tL~~N~--ySWnk~aNiL 121 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGG----LFEENGPFR-----VKYNGK---TLYLNP--YSWNKEANIL 121 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchhh----hhhhcCCeE-----EcCCCC---cceeCC--ccccccccEE
Confidence 4445566665531 123559999999998887651 122344211 112222 345677 345 567
Q ss_pred EE--ecCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhhcCCC--ccceeEEeeeChhhHHHHhhhHHHHhhCC---
Q 020893 124 KI--RYCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPKGLA--NARKALLSGCSAGGLATFLHCDEFTKYLP--- 196 (320)
Q Consensus 124 ~v--pYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~~l~--~a~~vllsG~SAGGlga~l~~d~v~~~lp--- 196 (320)
|| |==+|-+++.+... +. ..-.....++.+++++|+.+ ++ +-....++|.|-+|.=+..-++.|.+.=.
T Consensus 122 fLd~PvGvGFSYs~~~~~-~~-~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 122 FLDQPVGVGFSYSNTSSD-YK-TGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred EEecCCcCCccccCCCCc-Cc-CCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 77 66666666665431 11 12223358899999999874 45 35689999999999888888888777532
Q ss_pred -CCceEEEeccc
Q 020893 197 -NNASVKCLSDA 207 (320)
Q Consensus 197 -~~a~v~~l~DS 207 (320)
+...+++++=.
T Consensus 198 ~~~iNLkG~~IG 209 (454)
T KOG1282|consen 198 KPNINLKGYAIG 209 (454)
T ss_pred CCcccceEEEec
Confidence 13456655533
No 31
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=72.24 E-value=5.1 Score=31.59 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhc-CCCccceeEEeeeChh-hHHHHhhhHHHHhhCCCCce
Q 020893 151 QKIWEAIILDLLPK-GLANARKALLSGCSAG-GLATFLHCDEFTKYLPNNAS 200 (320)
Q Consensus 151 ~~n~~avl~~L~~~-~l~~a~~vllsG~SAG-Glga~l~~d~v~~~lp~~a~ 200 (320)
.++++.-+++..++ .+..+++||+.|+|.| |+++ +|...|...+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~ 66 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGAD 66 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--E
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCC
Confidence 56788888888763 4677899999999997 4443 44445544443
No 32
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=71.81 E-value=12 Score=36.69 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=24.7
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHh
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFL 186 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l 186 (320)
++++++.|+.+.=-++.+|+++|-|+||.=+..
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~ 160 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANR 160 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHH
Confidence 677778887643336789999999999964443
No 33
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=70.77 E-value=9.5 Score=32.16 Aligned_cols=28 Identities=21% Similarity=0.094 Sum_probs=22.0
Q ss_pred ccceeEEeeeChhhHHHHhhhHHHHhhC
Q 020893 168 NARKALLSGCSAGGLATFLHCDEFTKYL 195 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d~v~~~l 195 (320)
...+|+|+|+|.||-=|.+-+-++....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 4568999999999977777677776653
No 34
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=70.53 E-value=4 Score=43.65 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhcCCCccceeEEeeeChhhH
Q 020893 150 GQKIWEAIILDLLPKGLANARKALLSGCSAGGL 182 (320)
Q Consensus 150 G~~n~~avl~~L~~~~l~~a~~vllsG~SAGGl 182 (320)
...-+-|+-+.|.+.|+...++++..|.||||+
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhH
Confidence 356678888999999999999999999999996
No 35
>PLN02454 triacylglycerol lipase
Probab=70.25 E-value=12 Score=38.02 Aligned_cols=64 Identities=17% Similarity=0.177 Sum_probs=38.2
Q ss_pred HHHHHhhcCCCccc-eeEEeeeChhhHHHHhhhHHHHhhCC--CCceEEEeccccccccCCCCchhHHHHHHHH
Q 020893 157 IILDLLPKGLANAR-KALLSGCSAGGLATFLHCDEFTKYLP--NNASVKCLSDAGFFLDERDISLNHTMRSLYK 227 (320)
Q Consensus 157 vl~~L~~~~l~~a~-~vllsG~SAGGlga~l~~d~v~~~lp--~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~ 227 (320)
.|..|++ ..++.+ .|++||+|-||.-|.+.+.+++.... ....|.++.=++ +--|+..+.+.+.
T Consensus 215 ~V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGs------PRVGN~~Fa~~~~ 281 (414)
T PLN02454 215 KIKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGS------PQVGNKEFNDRFK 281 (414)
T ss_pred HHHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCC------CcccCHHHHHHHH
Confidence 3444444 234433 69999999999999999988876532 223455544333 2335555554444
No 36
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=68.65 E-value=42 Score=28.52 Aligned_cols=50 Identities=14% Similarity=0.131 Sum_probs=28.5
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
++.+.+++... +. ++++|.|+|.||.-++.-+. ..|..++-.++.++...
T Consensus 52 ~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 52 LADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 44555555431 22 57999999999987765443 33433333344455443
No 37
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=68.14 E-value=5.7 Score=36.76 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=23.2
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
|++.|+++++. ++...++|.|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~-~~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVI-NETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCC-CCCCEEEEEcHHHHHHHHHHc
Confidence 56777776655 234689999999998776654
No 38
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=67.59 E-value=11 Score=35.99 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=32.7
Q ss_pred CCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCce--EEEeccccccccC
Q 020893 165 GLANARKALLSGCSAGGLATFLHCDEFTKYLPNNAS--VKCLSDAGFFLDE 213 (320)
Q Consensus 165 ~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~--v~~l~DSG~fld~ 213 (320)
|+....+|.+.|.|=||.+++.-+ .++..+-+..+ +...+=.|+-.|.
T Consensus 66 gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 66 GLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 566678999999999999997554 45555544455 6666555554443
No 39
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=66.57 E-value=17 Score=32.06 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccc
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDA 207 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DS 207 (320)
.....++.+.+. .++ ...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 444455555441 122 2799999999999998888888777 334555667775
No 40
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=66.37 E-value=7.4 Score=39.25 Aligned_cols=36 Identities=33% Similarity=0.499 Sum_probs=25.1
Q ss_pred HHHHHHHHhh----c--CCCccceeEEeeeChhhHHHHhhhH
Q 020893 154 WEAIILDLLP----K--GLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 154 ~~avl~~L~~----~--~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
.+.++++|++ + -..++++.+|+|.|.||++|+.-+=
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al 307 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGL 307 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHH
Confidence 4445555553 1 2346889999999999999887543
No 41
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=66.34 E-value=6.5 Score=34.16 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=22.9
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
.|++.|.++++. --+++|+|||++-+.+++-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 356677766665 5689999999998766554
No 42
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=65.73 E-value=6 Score=37.19 Aligned_cols=32 Identities=19% Similarity=0.096 Sum_probs=24.1
Q ss_pred HHHHhhcCCCccceeEEeeeChhhHHHHhhhHH
Q 020893 158 ILDLLPKGLANARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 158 l~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~ 190 (320)
++++++ -+++++.++++|+|||+-=++.-.-+
T Consensus 125 v~filk-~~~n~k~l~~gGHSaGAHLa~qav~R 156 (270)
T KOG4627|consen 125 VNFILK-YTENTKVLTFGGHSAGAHLAAQAVMR 156 (270)
T ss_pred HHHHHH-hcccceeEEEcccchHHHHHHHHHHH
Confidence 556665 68999999999999998755544443
No 43
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=65.61 E-value=51 Score=33.78 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=26.7
Q ss_pred HHHHHHHHhhcCCCc--cceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 154 WEAIILDLLPKGLAN--ARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 154 ~~avl~~L~~~~l~~--a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
+..+|+.+++ .++. -..+.|+|.|.||.=+..-+.+|.+.
T Consensus 154 ~~~~l~~f~~-~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 154 MYNFLQAFFG-SHEDLRANDLFVVGESYGGHYAPATAYRINMG 195 (462)
T ss_pred HHHHHHHHHH-hCccccCCCEEEEeecchhhhHHHHHHHHHhh
Confidence 3344444443 2443 36899999999998877777777643
No 44
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=65.36 E-value=43 Score=32.50 Aligned_cols=128 Identities=15% Similarity=0.079 Sum_probs=65.5
Q ss_pred CCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCc--ccccEEEE--ecCCCcccCCCCc
Q 020893 63 GARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDF--YNWNRVKI--RYCDGASFAGNAK 138 (320)
Q Consensus 63 gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f--~nwN~V~v--pYCdGd~~~G~~~ 138 (320)
..+-++|.|+||=-|-+..-- ....|--+. ...+- ..-..||.= ...|+||| |=-+|-++.-+..
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~----f~e~GP~~~-----~~~~~--~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~ 106 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGL----FGENGPFRI-----NPDGP--YTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS 106 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHH----HCTTSSEEE-----ETTST--SEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG
T ss_pred CCccEEEEecCCceecccccc----ccccCceEE-----eeccc--ccccccccccccccceEEEeecCceEEeeccccc
Confidence 467899999999667766422 123332111 10010 112345511 13678999 5566666654433
Q ss_pred cccCCcceEEeHHHHHHHHHHHHhhcCCC--ccceeEEeeeChhhHHHHhhhHHHHhhCCC----CceEEEec
Q 020893 139 FDNGTSSLYFRGQKIWEAIILDLLPKGLA--NARKALLSGCSAGGLATFLHCDEFTKYLPN----NASVKCLS 205 (320)
Q Consensus 139 ~~~~~~~l~frG~~n~~avl~~L~~~~l~--~a~~vllsG~SAGGlga~l~~d~v~~~lp~----~a~v~~l~ 205 (320)
. +. .+.---...+.+.+...+.. ++ +...+.|+|.|-||.=+..-+.+|.+.-.. ...++.|.
T Consensus 107 ~-~~-~~~~~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 107 D-YV-WNDDQAAEDLYEFLQQFFQK--FPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp G-GS--SHHHHHHHHHHHHHHHHHH--SGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred c-cc-chhhHHHHHHHHHHHHhhhh--hhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 1 00 01111122333333333332 44 334799999999999888888888877643 46677665
No 45
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=64.65 E-value=13 Score=33.56 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=21.9
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCC
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLP 196 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp 196 (320)
+.++.++++ .. ++.++|.|+|.||+-|.. ++++++
T Consensus 47 ~~l~~~i~~-~~-~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 47 AQLEQLIEE-LK-PENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHh-CC-CCCeEEEEEChHHHHHHH----HHHHhC
Confidence 444445442 22 233999999999986654 555665
No 46
>PHA02857 monoglyceride lipase; Provisional
Probab=64.56 E-value=41 Score=30.51 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=17.6
Q ss_pred hhhhccCCCeEEeecchhHhh
Q 020893 258 YALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
..++.|+.|++||+..-|.+-
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i~ 223 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEIS 223 (276)
T ss_pred HhcccCCCCEEEEecCCCCcC
Confidence 456788999999999999764
No 47
>PLN02442 S-formylglutathione hydrolase
Probab=64.55 E-value=5.1 Score=37.76 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=18.7
Q ss_pred ccceeEEeeeChhhHHHHhhhH
Q 020893 168 NARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d 189 (320)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 5688999999999999987554
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=63.32 E-value=10 Score=35.40 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
.-+.+++++|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 457788888875 344457899999999999887764
No 49
>PLN03037 lipase class 3 family protein; Provisional
Probab=61.46 E-value=21 Score=37.40 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=36.4
Q ss_pred ccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHH
Q 020893 168 NARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYK 227 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~ 227 (320)
....|+|||+|-||-=|.+++-.++..+|....|.++.=++ +--|+..+.+.+.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs------PRVGN~aFA~~~~ 369 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA------PRVGNLAFKEKLN 369 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC------CCccCHHHHHHHH
Confidence 44579999999999999999999988877432444444333 3335555544443
No 50
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=60.63 E-value=8.6 Score=35.91 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=22.5
Q ss_pred HHHHHhhcCCCcccee-EEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANARKA-LLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a~~v-llsG~SAGGlga~l~~ 188 (320)
|++.|+++|..--+++ .++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 5677776665433333 7899999999877764
No 51
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=59.62 E-value=25 Score=33.17 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
+-+.++++.|....-....+++|.|+|.||.-++..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 457778888764211123469999999999877643
No 52
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.98 E-value=11 Score=35.82 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=40.8
Q ss_pred CCccceeEEeeeChhhHHHHhhhHHHHhhCC------CCceEEEec-cccccccCCCCchhHHHHHHHHHHHH
Q 020893 166 LANARKALLSGCSAGGLATFLHCDEFTKYLP------NNASVKCLS-DAGFFLDERDISLNHTMRSLYKEIVE 231 (320)
Q Consensus 166 l~~a~~vllsG~SAGGlga~l~~d~v~~~lp------~~a~v~~l~-DSG~fld~~~~~g~~~~~~~~~~~~~ 231 (320)
...++.|+++|||-||+|--+--..-++-+- +-.+..-|. |+|++.-.-|++-.+.+..+-.++..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 3567899999999999996664443333221 000112233 88988766677666666666665554
No 53
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=58.06 E-value=19 Score=34.05 Aligned_cols=61 Identities=28% Similarity=0.285 Sum_probs=35.8
Q ss_pred eHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHH--HhhCCCCceEEEeccccccccC
Q 020893 149 RGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEF--TKYLPNNASVKCLSDAGFFLDE 213 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v--~~~lp~~a~v~~l~DSG~fld~ 213 (320)
+-.+=+++||..|.++ -.-+++=+.|+|.||++++...-.- ...+|+-. +++.=+|.|-..
T Consensus 84 ~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~--K~V~Ia~pfng~ 146 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLN--KLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEE--EEEEES--TTTT
T ss_pred HHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcccc--eEEEeccccCcc
Confidence 3455688899999863 3577889999999999987543332 22366433 334445666433
No 54
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=57.97 E-value=17 Score=32.27 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
...+++++++|.+..-...++|.+.|.|.||.-++..+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 44566778888864434789999999999998887543
No 55
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=57.49 E-value=22 Score=33.71 Aligned_cols=33 Identities=18% Similarity=0.047 Sum_probs=23.8
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
-+.+++++|.+. ..++|+|.|.|.||.=++..+
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHH
Confidence 345667777653 256899999999998777543
No 56
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=56.91 E-value=14 Score=33.96 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=23.1
Q ss_pred HHHHHHHHhh---cCCCccceeEEeeeChhhHHHHh
Q 020893 154 WEAIILDLLP---KGLANARKALLSGCSAGGLATFL 186 (320)
Q Consensus 154 ~~avl~~L~~---~~l~~a~~vllsG~SAGGlga~l 186 (320)
+...++.+++ ......++|+|.|+|.||+-+..
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~ 101 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARS 101 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHH
Confidence 4444555554 13567899999999999986544
No 57
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=56.13 E-value=35 Score=28.43 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=24.8
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
++++|.|+|.||.-++..+. ..|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAA----RYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHH----HSGGGEEEEEEESESSS
T ss_pred cccccccccccccccccccc----ccccccccceeeccccc
Confidence 68999999999987776554 35543443445555554
No 58
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=56.00 E-value=11 Score=39.08 Aligned_cols=38 Identities=16% Similarity=0.071 Sum_probs=29.8
Q ss_pred eHHHHHHHHHHHHhhc--CCC-ccceeEEeeeChhhHHHHh
Q 020893 149 RGQKIWEAIILDLLPK--GLA-NARKALLSGCSAGGLATFL 186 (320)
Q Consensus 149 rG~~n~~avl~~L~~~--~l~-~a~~vllsG~SAGGlga~l 186 (320)
-|..-...+|+|..++ .|+ +++.|-|.|.|||+..+..
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT 196 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHH
Confidence 4666777889998863 455 7999999999999987543
No 59
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=55.81 E-value=12 Score=35.05 Aligned_cols=31 Identities=26% Similarity=0.162 Sum_probs=19.6
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
|++.|++++...... .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 455666555321112 3999999999887643
No 60
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=55.79 E-value=12 Score=34.76 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=21.7
Q ss_pred HHHHHhhcCCCccce-eEEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANARK-ALLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a~~-vllsG~SAGGlga~l~~ 188 (320)
|++-|++++..-..+ -.++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 566676666543222 48999999999877544
No 61
>PRK11460 putative hydrolase; Provisional
Probab=55.61 E-value=16 Score=33.41 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
+.++++++..+.--+.++|+|.|.|.||.-++..
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~ 120 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEA 120 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHH
Confidence 3345555554322246799999999999988753
No 62
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=55.37 E-value=14 Score=35.33 Aligned_cols=40 Identities=25% Similarity=0.150 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhc---CC-----CccceeEEeeeChhhHHHHhhhHHH
Q 020893 152 KIWEAIILDLLPK---GL-----ANARKALLSGCSAGGLATFLHCDEF 191 (320)
Q Consensus 152 ~n~~avl~~L~~~---~l-----~~a~~vllsG~SAGGlga~l~~d~v 191 (320)
+.+.++++||.+. .+ .+.++|-|+|+|+||-.++..+-..
T Consensus 65 ~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 65 ASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 3578889998751 12 2557999999999999887655544
No 63
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=54.96 E-value=40 Score=31.26 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=40.1
Q ss_pred eHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCC---CCceEEEeccc
Q 020893 149 RGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLP---NNASVKCLSDA 207 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp---~~a~v~~l~DS 207 (320)
.|..++.+.|+... ...+.|+|.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 47777777777533 366789999999999999998888887432 24566666654
No 64
>PLN02324 triacylglycerol lipase
Probab=53.55 E-value=35 Score=34.83 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=26.8
Q ss_pred HHHHHHhhcCCCcc-ceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 156 AIILDLLPKGLANA-RKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 156 avl~~L~~~~l~~a-~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
+-|..|++ ..++. .+|++||+|-||-=|.+.+-+|...
T Consensus 201 ~eV~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 201 GELKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 33344554 34443 3799999999999888888777653
No 65
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=53.42 E-value=5.6 Score=41.28 Aligned_cols=25 Identities=24% Similarity=0.440 Sum_probs=20.9
Q ss_pred CCCccceeEEeeeChhhHHHHhhhHH
Q 020893 165 GLANARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 165 ~l~~a~~vllsG~SAGGlga~l~~d~ 190 (320)
|| +++++||+|-|+|.+||+++...
T Consensus 353 gF-~~~qLILSGlSMGTfgAlYYga~ 377 (511)
T TIGR03712 353 GF-DHDQLILSGLSMGTFGALYYGAK 377 (511)
T ss_pred CC-CHHHeeeccccccchhhhhhccc
Confidence 44 45689999999999999998764
No 66
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=52.89 E-value=14 Score=35.55 Aligned_cols=45 Identities=24% Similarity=0.199 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh--hCCC
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK--YLPN 197 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~--~lp~ 197 (320)
..=++.+|.+|.++ -+-+++=+.|+|+||+|...+.-.... .+|+
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 45588999999873 334456688999999998776655553 4775
No 67
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=52.60 E-value=28 Score=38.08 Aligned_cols=36 Identities=22% Similarity=0.079 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhcCCC--c------------cceeEEeeeChhhHHHHh
Q 020893 151 QKIWEAIILDLLPKGLA--N------------ARKALLSGCSAGGLATFL 186 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~--~------------a~~vllsG~SAGGlga~l 186 (320)
..-..++|+||..+... + ..+|-+.|.|.||+-+++
T Consensus 305 ~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~ 354 (767)
T PRK05371 305 IESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNA 354 (767)
T ss_pred HHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHH
Confidence 34577899999853211 1 469999999999987764
No 68
>PLN00021 chlorophyllase
Probab=52.55 E-value=17 Score=35.21 Aligned_cols=38 Identities=26% Similarity=0.142 Sum_probs=26.1
Q ss_pred HHHHHHHHhhc--------CCCccceeEEeeeChhhHHHHhhhHHH
Q 020893 154 WEAIILDLLPK--------GLANARKALLSGCSAGGLATFLHCDEF 191 (320)
Q Consensus 154 ~~avl~~L~~~--------~l~~a~~vllsG~SAGGlga~l~~d~v 191 (320)
..++++|+... .-.+.+++.|.|+|+||..++.-+-..
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGK 147 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhc
Confidence 45566666531 113457899999999999988766443
No 69
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=50.95 E-value=86 Score=29.64 Aligned_cols=18 Identities=17% Similarity=0.318 Sum_probs=15.7
Q ss_pred hhhccCCCeEEeecchhH
Q 020893 259 ALRYITTPFFILNSAYDV 276 (320)
Q Consensus 259 ~~~~i~tP~Fiv~s~YD~ 276 (320)
.++.++.|++++++.-|.
T Consensus 309 ~l~~i~~Pvlii~g~~D~ 326 (371)
T PRK14875 309 RLASLAIPVLVIWGEQDR 326 (371)
T ss_pred HHhcCCCCEEEEEECCCC
Confidence 567789999999999995
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=50.88 E-value=23 Score=32.86 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHH
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEF 191 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v 191 (320)
..-+++++++|.......+++|.++|.|.||.=|++.+...
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 45678999999875456889999999999998888876654
No 71
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=50.70 E-value=41 Score=31.33 Aligned_cols=24 Identities=38% Similarity=0.519 Sum_probs=18.5
Q ss_pred CCccceeEEeeeChhhHHHHhhhH
Q 020893 166 LANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 166 l~~a~~vllsG~SAGGlga~l~~d 189 (320)
+...++|+|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 333578999999999997666554
No 72
>PRK10673 acyl-CoA esterase; Provisional
Probab=49.91 E-value=33 Score=30.37 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=22.8
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccc
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAG 208 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG 208 (320)
++++|.|+|.||.-++..+. ..|..++-.++.|++
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~----~~~~~v~~lvli~~~ 115 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTA----LAPDRIDKLVAIDIA 115 (255)
T ss_pred CceEEEEECHHHHHHHHHHH----hCHhhcceEEEEecC
Confidence 56999999999987776543 344434434444544
No 73
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=49.66 E-value=31 Score=29.21 Aligned_cols=23 Identities=22% Similarity=0.270 Sum_probs=18.2
Q ss_pred ccceeEEeeeChhhHHHHhhhHH
Q 020893 168 NARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d~ 190 (320)
..++++|.|.|+||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 34679999999999888776553
No 74
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=49.50 E-value=16 Score=36.39 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=15.2
Q ss_pred cceeEEeeeChhhHHHH
Q 020893 169 ARKALLSGCSAGGLATF 185 (320)
Q Consensus 169 a~~vllsG~SAGGlga~ 185 (320)
.++|.++|+|-||..++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 57899999999998887
No 75
>PLN02310 triacylglycerol lipase
Probab=49.44 E-value=41 Score=34.23 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=29.1
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccc
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAG 208 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG 208 (320)
..+|+|||+|-||-=|.+.+..++..++. ..|.++.=++
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTFGs 246 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISFGA 246 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEecC
Confidence 35799999999999999999888876663 4455554333
No 76
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=48.10 E-value=24 Score=36.18 Aligned_cols=35 Identities=17% Similarity=0.088 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhc--CC-CccceeEEeeeChhhHHHHhh
Q 020893 153 IWEAIILDLLPK--GL-ANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 153 n~~avl~~L~~~--~l-~~a~~vllsG~SAGGlga~l~ 187 (320)
-..+.|+|+.++ .| +++++|.|.|.||||..+-++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 355667787753 34 489999999999999887554
No 77
>PLN02965 Probable pheophorbidase
Probab=46.52 E-value=40 Score=30.43 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=21.8
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccc
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDA 207 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DS 207 (320)
++++|.|+|.||.=+...+. ..|..++-.++.++
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~ 105 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAA 105 (255)
T ss_pred CCEEEEecCcchHHHHHHHH----hCchheeEEEEEcc
Confidence 68999999999985554332 34554443444444
No 78
>PRK10349 carboxylesterase BioH; Provisional
Probab=46.49 E-value=44 Score=29.90 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=28.1
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccc
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGF 209 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~ 209 (320)
...+++...+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+..
T Consensus 63 ~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~~ 109 (256)
T PRK10349 63 DMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASSP 109 (256)
T ss_pred HHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCcc
Confidence 3444444322 368899999999998775443 3454444444556543
No 79
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=45.51 E-value=27 Score=36.20 Aligned_cols=36 Identities=8% Similarity=-0.040 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
.-+.++|+||..+...+ .+|.+.|.|.||.-+++-+
T Consensus 80 ~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred hHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 45678999998654444 6899999999998766543
No 80
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=45.01 E-value=48 Score=29.46 Aligned_cols=35 Identities=17% Similarity=0.006 Sum_probs=22.4
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccc
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDA 207 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DS 207 (320)
.++++|.|.|.||.-++..+. ..|..++..++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLAL----DGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHHH----hCCcccceEEEEcC
Confidence 357899999999988776543 44543443333443
No 81
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=44.80 E-value=49 Score=32.43 Aligned_cols=68 Identities=18% Similarity=0.082 Sum_probs=42.2
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCC-CCceEEEeccccccccCCCCchhHHHHHHHHH
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLP-NNASVKCLSDAGFFLDERDISLNHTMRSLYKE 228 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp-~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 228 (320)
-+++.++.|++ .++ --+|++||+|.||-=|.+-+.++...-. ...+|+++.=++ +-.|+..+.+.+.+
T Consensus 156 ~~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~ 224 (336)
T KOG4569|consen 156 GLDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDE 224 (336)
T ss_pred HHHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHh
Confidence 45666777765 344 4579999999999777777776665533 234555555333 34455555554443
No 82
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=44.44 E-value=26 Score=30.58 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=20.6
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
.|++.|.++++.- =+++|.|||++=+.+.+
T Consensus 16 Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 16 GALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 5566666655442 68999999998665444
No 83
>KOG3101 consensus Esterase D [General function prediction only]
Probab=44.38 E-value=10 Score=35.79 Aligned_cols=19 Identities=26% Similarity=0.337 Sum_probs=16.3
Q ss_pred ccceeEEeeeChhhHHHHh
Q 020893 168 NARKALLSGCSAGGLATFL 186 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l 186 (320)
++.++-++|+|+||.||+.
T Consensus 139 d~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred cchhcceeccccCCCceEE
Confidence 4567899999999999875
No 84
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=44.27 E-value=19 Score=38.66 Aligned_cols=34 Identities=29% Similarity=0.329 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhhcCCCccceeEEeeeChhhHH
Q 020893 150 GQKIWEAIILDLLPKGLANARKALLSGCSAGGLA 183 (320)
Q Consensus 150 G~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlg 183 (320)
+..-+.+..++|.++|+-.++++-+.|.||||+=
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 3456788899999999999999999999999974
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=44.00 E-value=45 Score=34.28 Aligned_cols=55 Identities=13% Similarity=0.054 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhc-CCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCc-eEEEecccccccc
Q 020893 153 IWEAIILDLLPK-GLANARKALLSGCSAGGLATFLHCDEFTKYLPNNA-SVKCLSDAGFFLD 212 (320)
Q Consensus 153 n~~avl~~L~~~-~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a-~v~~l~DSG~fld 212 (320)
.+.++|++|... ++ ..++|.|.|+|.||.-+..-+. +.|..+ ++.+|.=+|+++.
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCccc
Confidence 455667777542 33 5688999999999987776543 344322 4555555666544
No 86
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=42.62 E-value=35 Score=29.52 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=16.9
Q ss_pred hhhhccCCCeEEeecchhHhh
Q 020893 258 YALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
..++.|+.|+++++...|.+.
T Consensus 192 ~~~~~i~~P~l~i~g~~D~~~ 212 (257)
T TIGR03611 192 ARLDRIQHPVLLIANRDDMLV 212 (257)
T ss_pred HHhcccCccEEEEecCcCccc
Confidence 346678999999999999653
No 87
>PLN02571 triacylglycerol lipase
Probab=42.52 E-value=43 Score=34.19 Aligned_cols=24 Identities=17% Similarity=0.210 Sum_probs=20.6
Q ss_pred eeEEeeeChhhHHHHhhhHHHHhh
Q 020893 171 KALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 171 ~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
.|+++|+|-||.=|.+.+..++..
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHh
Confidence 699999999998888888888653
No 88
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=42.45 E-value=37 Score=31.00 Aligned_cols=21 Identities=24% Similarity=0.227 Sum_probs=17.6
Q ss_pred hhhhccCCCeEEeecchhHhh
Q 020893 258 YALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
..++.|+.|++|+....|.+-
T Consensus 201 ~~l~~i~~P~lii~G~~D~~v 221 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPII 221 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCcC
Confidence 346899999999999999744
No 89
>PLN00413 triacylglycerol lipase
Probab=41.97 E-value=35 Score=35.42 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=24.6
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
.+.++++ ..++. +|+|||+|.||-=|.+.+.+++.
T Consensus 273 ~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 273 HLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 3444443 23433 69999999999888888877664
No 90
>PLN02209 serine carboxypeptidase
Probab=41.41 E-value=2.7e+02 Score=28.45 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=59.2
Q ss_pred CCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcc--cccEEEE--ecCCCcccCCCCc
Q 020893 63 GARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFY--NWNRVKI--RYCDGASFAGNAK 138 (320)
Q Consensus 63 gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--pYCdGd~~~G~~~ 138 (320)
..+-++|+|+||=-|-+..-... .+|-...-+. ...|-. ..-..||.-+ ..|+||| |-=+|-++..+..
T Consensus 66 ~~~Pl~lWlnGGPG~SS~~g~f~----e~GP~~~~~~--~~~~~~-~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~ 138 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSCLSGLFF----ENGPLALKNK--VYNGSV-PSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPI 138 (437)
T ss_pred CCCCEEEEECCCCcHHHhhhHHH----hcCCceeccC--CCCCCc-ccceeCCCchhhcCcEEEecCCCCCCccCCCCCC
Confidence 35689999999966655432221 2332211110 000000 1224566221 3567787 4555555543221
Q ss_pred cccCCcceEEeHHHHHHHHHHHHhhcCCCc--cceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 139 FDNGTSSLYFRGQKIWEAIILDLLPKGLAN--ARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 139 ~~~~~~~l~frG~~n~~avl~~L~~~~l~~--a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
. +...+ -....+++.+..++.. +++ ...+.|+|.|-||.=+..-+.+|.+.
T Consensus 139 ~-~~~~~--~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~ 191 (437)
T PLN02209 139 E-RTSDT--SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKG 191 (437)
T ss_pred C-ccCCH--HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhh
Confidence 1 11110 0124444444444432 332 34799999999997766666677553
No 91
>PLN02719 triacylglycerol lipase
Probab=40.24 E-value=47 Score=34.86 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=22.9
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
..+|++||+|-||-=|.+.+.+|+..
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~ 322 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEM 322 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHh
Confidence 35899999999999999999988875
No 92
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=39.81 E-value=22 Score=29.55 Aligned_cols=19 Identities=37% Similarity=0.380 Sum_probs=14.1
Q ss_pred eeEEeeeChhhHHHHhhhH
Q 020893 171 KALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 171 ~vllsG~SAGGlga~l~~d 189 (320)
--+++|.||||+-+.+.+-
T Consensus 28 ~d~i~GtS~Gal~a~~~~~ 46 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLAL 46 (204)
T ss_dssp -SEEEEECCHHHHHHHHHT
T ss_pred ccEEEEcChhhhhHHHHHh
Confidence 3569999999998855443
No 93
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=39.68 E-value=31 Score=32.50 Aligned_cols=31 Identities=26% Similarity=0.195 Sum_probs=19.4
Q ss_pred HHHHHhhcCCC-ccceeEEeeeChhhHHHHhh
Q 020893 157 IILDLLPKGLA-NARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 157 vl~~L~~~~l~-~a~~vllsG~SAGGlga~l~ 187 (320)
|++.|++++.. -.+--.++|+|||++-+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 45666655432 11135678999999987753
No 94
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=39.65 E-value=53 Score=28.89 Aligned_cols=62 Identities=19% Similarity=0.221 Sum_probs=40.8
Q ss_pred CCCCceEEeecCCCCCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcc
Q 020893 49 GSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFY 118 (320)
Q Consensus 49 GSp~~yy~~~g~G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~ 118 (320)
|-.|+.|+-.|.....+++-|=++|.||--|. .. .|-.+.-.....|.=+.+.++..+|+-|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g-----~Giv~~~~eqa~FDVv~DGnQ~V~pD~Y 139 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SG-----IGMVSHSDFTNEFNIYYFGNGDIPVDTY 139 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CC-----CceEeecccceeEEEEEeCCeecCCCeE
Confidence 54567777777766788999999999998776 22 2222211234556666777777777643
No 95
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=39.23 E-value=78 Score=31.49 Aligned_cols=21 Identities=24% Similarity=0.173 Sum_probs=16.8
Q ss_pred cceeEEeeeChhhHHHHhhhH
Q 020893 169 ARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d 189 (320)
.++++|.|+|.||+-++..+-
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~ 195 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYAL 195 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 357999999999998776543
No 96
>PLN02753 triacylglycerol lipase
Probab=38.89 E-value=51 Score=34.72 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=22.9
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
..+|++||+|-||-=|.+.+.+++..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~ 336 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEM 336 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHh
Confidence 45899999999999999999888764
No 97
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=38.87 E-value=79 Score=29.05 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=18.6
Q ss_pred hhhhhccCCCeEEeecchhHhh
Q 020893 257 QYALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 257 q~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
+..++.|+.|++||+..-|.+-
T Consensus 227 ~~~l~~i~~P~lvi~G~~D~~~ 248 (294)
T PLN02824 227 EELLPAVKCPVLIAWGEKDPWE 248 (294)
T ss_pred HHHHhhcCCCeEEEEecCCCCC
Confidence 4567889999999999999754
No 98
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=38.77 E-value=34 Score=34.81 Aligned_cols=31 Identities=29% Similarity=0.600 Sum_probs=21.5
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
-|++.|.++|+.- + +++|+|||++-+.+.+-
T Consensus 90 GVLkaL~E~gl~p-~--vIsGTSaGAivAal~as 120 (421)
T cd07230 90 GVLKALFEANLLP-R--IISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 3556666666643 2 79999999988766553
No 99
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=38.45 E-value=60 Score=31.24 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=24.3
Q ss_pred CccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecc
Q 020893 167 ANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSD 206 (320)
Q Consensus 167 ~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~D 206 (320)
.+.+.|+|+|. |+.+..+++++.+|. +++..+.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999874 344668999999996 55555544
No 100
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=38.39 E-value=38 Score=34.50 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHH
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATF 185 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~ 185 (320)
+-+++||++|.+...-+.++|.+.|-|.||+-++
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 4578999999864333678999999999997654
No 101
>PRK00870 haloalkane dehalogenase; Provisional
Probab=38.35 E-value=84 Score=29.12 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=24.0
Q ss_pred cceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccc
Q 020893 169 ARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGF 209 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~ 209 (320)
.++|+|.|+|.||.=++.-+ ...|..++-.++.+++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLA----AEHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHH----HhChhheeEEEEeCCCC
Confidence 35799999999997665433 33454444445566654
No 102
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=38.27 E-value=31 Score=31.34 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=29.9
Q ss_pred ceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHH
Q 020893 145 SLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEF 191 (320)
Q Consensus 145 ~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v 191 (320)
.+.--|.+.++.+++.+... -....+|++.|+|.||+=+-.-.-.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~-~~~~~~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDY-ESKIRKISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred hhHHHHHHHHHHHHHhcccc-ccccccceEEEecccHHHHHHHHHHh
Confidence 34446777777777776542 11246899999999998654433333
No 103
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.66 E-value=45 Score=28.76 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=22.2
Q ss_pred HHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 155 EAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 155 ~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
-.+++.|.++++. . =+++|.|||++-+.+.+
T Consensus 16 ~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 16 IGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 4567777766653 3 47999999999876655
No 104
>PRK04940 hypothetical protein; Provisional
Probab=35.97 E-value=67 Score=29.07 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=18.8
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCC
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLP 196 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp 196 (320)
+.++|.|+|-||+ ++-++..++.
T Consensus 60 ~~~~liGSSLGGy----yA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGGY----WAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHHH----HHHHHHHHHC
Confidence 5699999999995 7777777765
No 105
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=35.86 E-value=54 Score=33.58 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=22.3
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
.+++.++.+.++ ...++|+|.|+|+||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 344445544431 2356899999999998876533
No 106
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.11 E-value=44 Score=30.64 Aligned_cols=30 Identities=37% Similarity=0.497 Sum_probs=20.9
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
.|++.|.++++. . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 456666665653 2 36999999999876655
No 107
>PLN02934 triacylglycerol lipase
Probab=35.03 E-value=61 Score=34.01 Aligned_cols=38 Identities=24% Similarity=0.256 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
++..|+.+++ ..++ .+|++||+|-||-=|.+.+..++.
T Consensus 307 v~~~lk~ll~-~~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 307 VRSKLKSLLK-EHKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHH-HCCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 5555666665 2344 479999999999888888776654
No 108
>PLN02162 triacylglycerol lipase
Probab=34.59 E-value=68 Score=33.36 Aligned_cols=125 Identities=17% Similarity=0.114 Sum_probs=59.6
Q ss_pred ccEEEEeecccccCChhhhhhhccCCCCCcc-cccc--ccccccccCCCCCCCCCcccccEEEEecCC-CcccCCCCcc-
Q 020893 65 RNWLLQFEGGGWCNDIPSCLERAQTRRGSTR-YMTK--YEIFSGILSNNASLNPDFYNWNRVKIRYCD-GASFAGNAKF- 139 (320)
Q Consensus 65 ~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~-~~~~--~~~~~Gils~~~~~NP~f~nwN~V~vpYCd-Gd~~~G~~~~- 139 (320)
+.|=.+|-|+=-||+.-.=...........+ .-++ ...|-|--+.+. .| -..|.+...+++|+ |-+|.|-...
T Consensus 163 ~~w~m~~v~~y~~wn~~~~~~~TQafv~~d~~~d~~~IVVAFRGT~~~~~-~D-WiTDld~s~~~~~~~GkVH~GF~~A~ 240 (475)
T PLN02162 163 NTWKMDLVGNYDFYNAFQESKLTQAFVFKTSSTNPDLIVVSFRGTEPFEA-AD-WCTDLDLSWYELKNVGKVHAGFSRAL 240 (475)
T ss_pred HhcCccccchhhhhhhhhhhcccceEEEEeccCCCceEEEEEccCCCCcH-HH-HHhhcCcceecCCCCeeeeHHHHHHH
Confidence 6788999999999976532111111111110 0011 122333321110 01 12344445566664 6777775431
Q ss_pred ---ccC---CcceEEeHHH---HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 140 ---DNG---TSSLYFRGQK---IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 140 ---~~~---~~~l~frG~~---n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
.+. ....-.+... -++..+.+++.+ .+ -.++++||+|-||-=|.+.+..++.
T Consensus 241 ~~~~~~~~p~~~~~~~~~~ay~~I~~~L~~lL~k-~p-~~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 241 GLQKDGGWPKENISLLHQYAYYTIRQMLRDKLAR-NK-NLKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HhhhcccccccccchhhhhhHHHHHHHHHHHHHh-CC-CceEEEEecChHHHHHHHHHHHHHH
Confidence 000 0011111112 233334444432 23 3479999999999888888777764
No 109
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.59 E-value=52 Score=28.59 Aligned_cols=29 Identities=24% Similarity=0.429 Sum_probs=19.3
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
-+++.|.++++. -=+++|.|||++-+.+.
T Consensus 17 Gvl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 17 GVLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 345666655553 35889999999955443
No 110
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=34.55 E-value=59 Score=27.63 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=16.9
Q ss_pred hhhhccCCCeEEeecchhHhh
Q 020893 258 YALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
..++.++.|+++++...|..-
T Consensus 187 ~~~~~~~~Pvlii~g~~D~~~ 207 (251)
T TIGR02427 187 DRLGAIAVPTLCIAGDQDGST 207 (251)
T ss_pred HHhhhcCCCeEEEEeccCCcC
Confidence 345778999999999988754
No 111
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.51 E-value=40 Score=32.24 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=21.2
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
||+.|.+.| -+--+|+|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 456666545 445689999999987666554
No 112
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=34.28 E-value=54 Score=33.83 Aligned_cols=50 Identities=22% Similarity=0.181 Sum_probs=36.2
Q ss_pred cceEEeHHHHHHHHHHHHh-------hcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCC
Q 020893 144 SSLYFRGQKIWEAIILDLL-------PKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN 197 (320)
Q Consensus 144 ~~l~frG~~n~~avl~~L~-------~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~ 197 (320)
+...|-|+.+.+.+|++.. ..--.++..||+.|.|-|| +-+.++|-.+|.
T Consensus 134 k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWfRlKYPH 190 (492)
T KOG2183|consen 134 KDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWFRLKYPH 190 (492)
T ss_pred cChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh----HHHHHHHhcChh
Confidence 3566778888887776533 2223367789999999999 567788888884
No 113
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=33.45 E-value=81 Score=31.68 Aligned_cols=51 Identities=25% Similarity=0.122 Sum_probs=32.8
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccc
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFL 211 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fl 211 (320)
++.+=+|-...|+. +.+|.|+|-||+=+..++- .+|..++-.+|+|..=|-
T Consensus 147 vesiE~WR~~~~L~---KmilvGHSfGGYLaa~YAl----KyPerV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 147 VESIEQWRKKMGLE---KMILVGHSFGGYLAAKYAL----KYPERVEKLILVSPWGFP 197 (365)
T ss_pred HHHHHHHHHHcCCc---ceeEeeccchHHHHHHHHH----hChHhhceEEEecccccc
Confidence 34444444444554 8999999999986555443 467777777777763333
No 114
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=32.89 E-value=83 Score=30.87 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=49.6
Q ss_pred ccccEEEEecCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhh-cCCCccceeEEeeeChhhHHHHhhhHHHHh--h
Q 020893 118 YNWNRVKIRYCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLP-KGLANARKALLSGCSAGGLATFLHCDEFTK--Y 194 (320)
Q Consensus 118 ~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~-~~l~~a~~vllsG~SAGGlga~l~~d~v~~--~ 194 (320)
.|.|+|.|-+-.+..- .+... -......|. .+-.+|..|.. .++ ..++|-|.|+|-||--+-+-..++.. .
T Consensus 103 ~d~NVI~VDWs~~a~~-~Y~~a---~~n~~~vg~-~la~~l~~L~~~~g~-~~~~ihlIGhSLGAHvaG~aG~~~~~~~k 176 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASN-NYPQA---VANTRLVGR-QLAKFLSFLINNFGV-PPENIHLIGHSLGAHVAGFAGKYLKGGGK 176 (331)
T ss_dssp S-EEEEEEE-HHHHSS--HHHH---HHHHHHHHH-HHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---
T ss_pred CCceEEEEcchhhccc-cccch---hhhHHHHHH-HHHHHHHHHHhhcCC-ChhHEEEEeeccchhhhhhhhhhccCcce
Confidence 3578888877555421 00000 001112233 23344556653 244 47899999999999988888888877 5
Q ss_pred CCCCceEEEeccccccccCCC
Q 020893 195 LPNNASVKCLSDAGFFLDERD 215 (320)
Q Consensus 195 lp~~a~v~~l~DSG~fld~~~ 215 (320)
++ ++.+|.=||+.+...+
T Consensus 177 i~---rItgLDPAgP~F~~~~ 194 (331)
T PF00151_consen 177 IG---RITGLDPAGPLFENNP 194 (331)
T ss_dssp SS---EEEEES-B-TTTTTS-
T ss_pred ee---EEEecCcccccccCCC
Confidence 54 6889988998876543
No 115
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=32.56 E-value=45 Score=28.85 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=32.2
Q ss_pred cCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChh
Q 020893 127 YCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAG 180 (320)
Q Consensus 127 YCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAG 180 (320)
|+-+|.|.|..........-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 7789999998642111000001112345677777765 5778999999997554
No 116
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=32.31 E-value=1e+02 Score=30.14 Aligned_cols=41 Identities=32% Similarity=0.359 Sum_probs=27.2
Q ss_pred ceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 145 SLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 145 ~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
...=+|..+.+-|-+-|. ...+++|.|.|+|+||+-+.+..
T Consensus 105 ~~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~ry~~ 145 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSRYYL 145 (336)
T ss_pred cccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhHHHH
Confidence 334455555555544443 25669999999999999888433
No 117
>PRK10749 lysophospholipase L2; Provisional
Probab=31.96 E-value=1.4e+02 Score=28.48 Aligned_cols=21 Identities=29% Similarity=0.216 Sum_probs=16.7
Q ss_pred cceeEEeeeChhhHHHHhhhH
Q 020893 169 ARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 169 a~~vllsG~SAGGlga~l~~d 189 (320)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999987765543
No 118
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=30.94 E-value=89 Score=29.98 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=24.2
Q ss_pred ce-eEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 170 RK-ALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 170 ~~-vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
++ ++|.|+|.||.=++..+-. .|..++-.++.|+...
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSAR 163 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCc
Confidence 45 9999999999877665543 3433444455666554
No 119
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=30.93 E-value=48 Score=32.26 Aligned_cols=117 Identities=17% Similarity=0.194 Sum_probs=55.1
Q ss_pred cceEEeHH-HHHHHHHHHHhhcCCC--ccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCC----
Q 020893 144 SSLYFRGQ-KIWEAIILDLLPKGLA--NARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDI---- 216 (320)
Q Consensus 144 ~~l~frG~-~n~~avl~~L~~~~l~--~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~---- 216 (320)
.+.|||+- ......++.|.+ ++ +.++|.++|.|-||.=|++-+- |.+.++ .++++--|+=|.+..
T Consensus 148 e~~yyr~~~~D~~ravd~l~s--lpevD~~rI~v~G~SqGG~lal~~aa-----Ld~rv~-~~~~~vP~l~d~~~~~~~~ 219 (320)
T PF05448_consen 148 EDYYYRRVYLDAVRAVDFLRS--LPEVDGKRIGVTGGSQGGGLALAAAA-----LDPRVK-AAAADVPFLCDFRRALELR 219 (320)
T ss_dssp TT-HHHHHHHHHHHHHHHHHT--STTEEEEEEEEEEETHHHHHHHHHHH-----HSST-S-EEEEESESSSSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHh--CCCcCcceEEEEeecCchHHHHHHHH-----hCcccc-EEEecCCCccchhhhhhcC
Confidence 46788874 333344566654 56 5789999999999976665433 332222 234444455443211
Q ss_pred ---chhHHHHHHHHHHHHhhcccccccchhhhcCCCCcccccchhhhhccCCCeEEeecchhH
Q 020893 217 ---SLNHTMRSLYKEIVELQGVEQNLDKNCTKSLYIPELCFFPQYALRYITTPFFILNSAYDV 276 (320)
Q Consensus 217 ---~g~~~~~~~~~~~~~~~~~~~~lp~~C~~~~~~~~kC~f~q~~~~~i~tP~Fiv~s~YD~ 276 (320)
.+-..++.+++ .......-.+...+.+ .=|=..++.+.|+.|+++--++-|.
T Consensus 220 ~~~~~y~~~~~~~~----~~d~~~~~~~~v~~~L----~Y~D~~nfA~ri~~pvl~~~gl~D~ 274 (320)
T PF05448_consen 220 ADEGPYPEIRRYFR----WRDPHHEREPEVFETL----SYFDAVNFARRIKCPVLFSVGLQDP 274 (320)
T ss_dssp --STTTHHHHHHHH----HHSCTHCHHHHHHHHH----HTT-HHHHGGG--SEEEEEEETT-S
T ss_pred CccccHHHHHHHHh----ccCCCcccHHHHHHHH----hhhhHHHHHHHcCCCEEEEEecCCC
Confidence 00011222221 1100000001111110 1112347789999999999999994
No 120
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=30.37 E-value=1.2e+02 Score=30.30 Aligned_cols=45 Identities=16% Similarity=0.071 Sum_probs=25.4
Q ss_pred ccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCc
Q 020893 168 NARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDIS 217 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~ 217 (320)
...++|+.|+|-|| .-+-++|..+|. .-.-.++-|++..-..++.
T Consensus 111 ~~~pwI~~GgSY~G----~Laaw~r~kyP~-~~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 111 PNSPWIVFGGSYGG----ALAAWFRLKYPH-LFDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp CC--EEEEEETHHH----HHHHHHHHH-TT-T-SEEEEET--CCHCCTTT
T ss_pred CCCCEEEECCcchh----HHHHHHHhhCCC-eeEEEEeccceeeeecccH
Confidence 33478888888777 345678889996 3345566777665544443
No 121
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=30.33 E-value=65 Score=27.63 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=23.0
Q ss_pred HHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 155 EAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 155 ~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
-.|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 14 ~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 34566666655542 3467899999999888776
No 122
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.28 E-value=56 Score=29.59 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=19.6
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
|++.|.+.++ .--+++|.|||++=+.+.
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~ 43 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALI 43 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHH
Confidence 5666666665 334899999999865544
No 123
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.28 E-value=1.3e+02 Score=33.59 Aligned_cols=66 Identities=11% Similarity=0.150 Sum_probs=34.6
Q ss_pred CCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHHHHHHhhc
Q 020893 166 LANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIVELQG 234 (320)
Q Consensus 166 l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~~~~~ 234 (320)
.+.++.|+|.|+|.||+=|..-.- ..+..+..+. .+|.=|. -...++..-...+-++|..+.+.|+
T Consensus 178 ~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sVn-tIITlss-PH~a~Pl~~D~~l~~fy~~vnn~W~ 243 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVARATLT-LKNEVQGSVN-TIITLSS-PHAAPPLPLDRFLLRFYLLVNNYWN 243 (973)
T ss_pred CCCCceEEEEeccchhHHHHHHHh-hhhhccchhh-hhhhhcC-cccCCCCCCcHHHHHHHHHHHHHHH
Confidence 456899999999999985433211 1111111111 1122222 2233444445666677777766654
No 124
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=30.03 E-value=55 Score=31.73 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=22.7
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
.||+.|.++|++ --+++|.|||++=+.+++-
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 456777776664 3578999999987766554
No 125
>PLN02847 triacylglycerol lipase
Probab=29.96 E-value=1e+02 Score=33.18 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=23.2
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhh--CCCCceEEEec
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKY--LPNNASVKCLS 205 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~--lp~~a~v~~l~ 205 (320)
-+|+|+|+|-||-=|.+-+-.+++. ++ +.+...++
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe~~~fs-si~CyAFg 287 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILREQKEFS-STTCVTFA 287 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhcCCCCC-CceEEEec
Confidence 3899999999986666667677753 44 34444443
No 126
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=29.59 E-value=53 Score=28.08 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=9.7
Q ss_pred eEEeeeChhhH
Q 020893 172 ALLSGCSAGGL 182 (320)
Q Consensus 172 vllsG~SAGGl 182 (320)
+++.|.|||+.
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78899999994
No 127
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=29.51 E-value=68 Score=28.88 Aligned_cols=22 Identities=32% Similarity=0.356 Sum_probs=17.9
Q ss_pred ccceeEEeeeChhhHHHHhhhH
Q 020893 168 NARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 168 ~a~~vllsG~SAGGlga~l~~d 189 (320)
..++++|.|+|.||.=++..+.
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHH
Confidence 3468999999999998887654
No 128
>PLN02761 lipase class 3 family protein
Probab=29.49 E-value=93 Score=32.79 Aligned_cols=25 Identities=12% Similarity=0.220 Sum_probs=21.8
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhh
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKY 194 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~ 194 (320)
-+|+++|+|-||-=|.+.+.+|...
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~ 318 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAEL 318 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4899999999999999999888753
No 129
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=29.43 E-value=1.8e+02 Score=26.48 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhhcC--CCccceeEEeeeChhh
Q 020893 150 GQKIWEAIILDLLPKG--LANARKALLSGCSAGG 181 (320)
Q Consensus 150 G~~n~~avl~~L~~~~--l~~a~~vllsG~SAGG 181 (320)
+...++..+++|.... -.+++.||++|-..-.
T Consensus 15 ~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 15 LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred hHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 3457788888876421 1357899999987765
No 130
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=29.38 E-value=86 Score=30.07 Aligned_cols=93 Identities=23% Similarity=0.292 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCchhHHHHHHHHHHH
Q 020893 151 QKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIV 230 (320)
Q Consensus 151 ~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~g~~~~~~~~~~~~ 230 (320)
+.-++|+.++|.+ ..++.++|+|-|.|.|..-++ +++.+.|. +-| +-.|-| .+| ++-++..
T Consensus 112 y~Di~avye~Lr~-~~g~~~~Iil~G~SiGt~~tv----~Lasr~~~-~al--VL~SPf------~S~---~rv~~~~-- 172 (258)
T KOG1552|consen 112 YADIKAVYEWLRN-RYGSPERIILYGQSIGTVPTV----DLASRYPL-AAV--VLHSPF------TSG---MRVAFPD-- 172 (258)
T ss_pred hhhHHHHHHHHHh-hcCCCceEEEEEecCCchhhh----hHhhcCCc-ceE--EEeccc------hhh---hhhhccC--
Confidence 4568999999987 344889999999999987643 34455662 222 223322 232 1111110
Q ss_pred HhhcccccccchhhhcCCCCcccccchhhhhccCCCeEEeecchhH
Q 020893 231 ELQGVEQNLDKNCTKSLYIPELCFFPQYALRYITTPFFILNSAYDV 276 (320)
Q Consensus 231 ~~~~~~~~lp~~C~~~~~~~~kC~f~q~~~~~i~tP~Fiv~s~YD~ 276 (320)
... ..|... |.-..-++.|+.|+.|+++.=|.
T Consensus 173 ----~~~---~~~~d~-------f~~i~kI~~i~~PVLiiHgtdDe 204 (258)
T KOG1552|consen 173 ----TKT---TYCFDA-------FPNIEKISKITCPVLIIHGTDDE 204 (258)
T ss_pred ----cce---EEeecc-------ccccCcceeccCCEEEEecccCc
Confidence 000 012211 11166778899999999998886
No 131
>COG0627 Predicted esterase [General function prediction only]
Probab=29.36 E-value=51 Score=32.26 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=25.2
Q ss_pred eeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 171 KALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 171 ~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
+--++|.|.||.||+..+-+--++++ .+.+.||+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~-----~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFK-----SASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhc-----eeccccccc
Confidence 78899999999999985544434443 456677764
No 132
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=29.12 E-value=1e+02 Score=30.77 Aligned_cols=44 Identities=30% Similarity=0.345 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCc-eEEEec
Q 020893 155 EAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNA-SVKCLS 205 (320)
Q Consensus 155 ~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a-~v~~l~ 205 (320)
++.++||.++|+. ++-|+|-|.||. ++.-.....|+.+ .|-+++
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~pv~~vp~ls 207 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRPVALVPCLS 207 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCceeEEEeec
Confidence 4667888876554 899999999996 4444555666532 344443
No 133
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.89 E-value=60 Score=30.10 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhh
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLH 187 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~ 187 (320)
.||+.|.++++. +==+++|.|||++=+.+.
T Consensus 15 Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 15 GVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 456667666665 233789999999876653
No 134
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.83 E-value=64 Score=31.46 Aligned_cols=29 Identities=28% Similarity=0.415 Sum_probs=20.2
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
|++.|.++++.. =+++|.|||++-+.+.+
T Consensus 87 vl~aL~e~~l~~---~~i~GtSaGAi~aa~~~ 115 (298)
T cd07206 87 VVKALWEQDLLP---RVISGSSAGAIVAALLG 115 (298)
T ss_pred HHHHHHHcCCCC---CEEEEEcHHHHHHHHHH
Confidence 445555555542 26999999999887766
No 135
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=28.78 E-value=1.5e+02 Score=26.08 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
..|.+.|+.-+. .. .+.++|.|+|.|.+.++.+..
T Consensus 40 ~~W~~~l~~~i~-~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 40 DEWVQALDQAID-AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHHCCH-C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 346666665443 22 334999999999999988876
No 136
>PF04631 Baculo_44: Baculovirus hypothetical protein; InterPro: IPR006725 This family includes several hypothetical baculoviral proteins, with predicted molecular weights of approximately 44 kDa.
Probab=28.58 E-value=32 Score=34.42 Aligned_cols=50 Identities=14% Similarity=0.333 Sum_probs=33.7
Q ss_pred CCccCCCCCCceEEeecCCCCCccEEE---EeecccccCCh---hhhhhhccCCCCCcccc
Q 020893 43 GAFCLDGSLPAYHLHRGFGAGARNWLL---QFEGGGWCNDI---PSCLERAQTRRGSTRYM 97 (320)
Q Consensus 43 gA~ClDGSp~~yy~~~g~G~gs~kwlI---~leGGG~C~~~---~tC~~r~~t~lGSs~~~ 97 (320)
-++|.|.|...||+.+. +|++| .|.-||||-.. ..|.....-.+-|.+.|
T Consensus 94 t~iC~n~sA~yf~V~~~-----dkfvvng~~L~~GgYCttnsvPrnCNreTSvvl~slNqW 149 (371)
T PF04631_consen 94 TSICDNPSAVYFFVGEH-----DKFVVNGQRLSPGGYCTTNSVPRNCNRETSVVLHSLNQW 149 (371)
T ss_pred hhhcCCCcceEEEecCC-----ceEEEcCcCccCCccccCCCcccccCccceEEEEcCCcE
Confidence 46899999877777665 57776 48899999843 47874322234454444
No 137
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=28.13 E-value=2e+02 Score=25.41 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=28.9
Q ss_pred eHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHH
Q 020893 149 RGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDE 190 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~ 190 (320)
.|..++...|++...+ -++ .+++|+|.|-|+.-+......
T Consensus 62 ~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 62 AGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 5777888888877653 343 489999999999876555443
No 138
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=28.11 E-value=1.4e+02 Score=26.92 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhhc--CCCccceeEEeeeChhhHHH---HhhhHHHHhhCCC
Q 020893 150 GQKIWEAIILDLLPK--GLANARKALLSGCSAGGLAT---FLHCDEFTKYLPN 197 (320)
Q Consensus 150 G~~n~~avl~~L~~~--~l~~a~~vllsG~SAGGlga---~l~~d~v~~~lp~ 197 (320)
|...++.+++.+.+. .....+-++|.-+-+||.|+ .+-++.+++.+|.
T Consensus 103 ~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~ 155 (216)
T PF00091_consen 103 GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPK 155 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTT
T ss_pred ccccccccccccchhhccccccccceecccccceeccccccccchhhhccccc
Confidence 344778888877652 44788999999888888764 5668889999985
No 139
>PRK10279 hypothetical protein; Provisional
Probab=28.01 E-value=62 Score=31.34 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=21.6
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
||+.|.+.|++ --+++|+|||++=+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 56777776774 368899999998766555
No 140
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=27.88 E-value=61 Score=32.89 Aligned_cols=56 Identities=18% Similarity=0.296 Sum_probs=32.7
Q ss_pred EeHHHHHH--HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccccc
Q 020893 148 FRGQKIWE--AIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFF 210 (320)
Q Consensus 148 frG~~n~~--avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~f 210 (320)
+-|..+++ .++|+|.+.-.-++++|-++|.|.||+=+++- ..|.. +|++.+=+|++
T Consensus 202 ~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L-----aALDd--RIka~v~~~~l 259 (390)
T PF12715_consen 202 LAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL-----AALDD--RIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH-----HHH-T--T--EEEEES-B
T ss_pred HHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH-----HHcch--hhHhHhhhhhh
Confidence 34444443 36778875444478999999999999876653 23433 34444445654
No 141
>COG4099 Predicted peptidase [General function prediction only]
Probab=27.50 E-value=70 Score=31.81 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhC
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYL 195 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~l 195 (320)
.-++.+.+.|.+.---+-.++.++|-|-||+|++.-...+-+.|
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhh
Confidence 34566666666632224569999999999999998665444444
No 142
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=27.45 E-value=65 Score=30.99 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=25.5
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
-+.++++++.++ ...+++.+.|+|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 367778888753 2457899999999998776543
No 143
>PRK04123 ribulokinase; Provisional
Probab=27.41 E-value=1.2e+02 Score=31.50 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=43.6
Q ss_pred cEEEEecCCCcccCCCCccc-cC-------CcceEEeHHHHHHHHHHHHh-----------hcCCCccceeEEeeeChhh
Q 020893 121 NRVKIRYCDGASFAGNAKFD-NG-------TSSLYFRGQKIWEAIILDLL-----------PKGLANARKALLSGCSAGG 181 (320)
Q Consensus 121 N~V~vpYCdGd~~~G~~~~~-~~-------~~~l~frG~~n~~avl~~L~-----------~~~l~~a~~vllsG~SAGG 181 (320)
-.+|+||= .|.+... ++ |.++.+.=..+++|+++=+. +.+. ..++|+++| ||
T Consensus 378 gl~f~P~l-----~Ger~P~~~~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~e~l~~~g~-~~~~i~~~G---Gg 448 (548)
T PRK04123 378 GLVALDWF-----NGRRTPLADQRLKGVITGLTLGTDAPDIYRALIEATAFGTRAIMECFEDQGV-PVEEVIAAG---GI 448 (548)
T ss_pred ceEEcccc-----cCCCCCCCCCCCceEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcceEEEeC---CC
Confidence 35899984 4544431 11 34555555667888777322 2132 467888887 45
Q ss_pred -HHHHhhhHHHHhhCCCCceE
Q 020893 182 -LATFLHCDEFTKYLPNNASV 201 (320)
Q Consensus 182 -lga~l~~d~v~~~lp~~a~v 201 (320)
--.-+|.+-+++.+...+.+
T Consensus 449 ~s~s~~w~Qi~ADv~g~pV~~ 469 (548)
T PRK04123 449 ARKNPVLMQIYADVLNRPIQV 469 (548)
T ss_pred cccCHHHHHHHHHhcCCceEe
Confidence 45678888888888754433
No 144
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=26.76 E-value=74 Score=31.48 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=20.6
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
|++-|.++|+.. -+++|+|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHc
Confidence 455566656642 259999999998766554
No 145
>PRK10985 putative hydrolase; Provisional
Probab=26.66 E-value=81 Score=29.99 Aligned_cols=33 Identities=15% Similarity=-0.009 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFL 186 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l 186 (320)
.-+.++++++.++ ++ .+++++.|.|.||.=+..
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHH
Confidence 3467778888752 33 356999999999964433
No 146
>PLN02578 hydrolase
Probab=26.23 E-value=1.3e+02 Score=28.99 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=17.8
Q ss_pred hhhhccCCCeEEeecchhHhh
Q 020893 258 YALRYITTPFFILNSAYDVFQ 278 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~wQ 278 (320)
..++.|+.|+.+|+...|.|-
T Consensus 290 ~~l~~i~~PvLiI~G~~D~~v 310 (354)
T PLN02578 290 SLLSKLSCPLLLLWGDLDPWV 310 (354)
T ss_pred HHhhcCCCCEEEEEeCCCCCC
Confidence 457889999999999999653
No 147
>PRK11071 esterase YqiA; Provisional
Probab=26.21 E-value=1e+02 Score=27.20 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=22.2
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
+.+.+++++++ +. .++++|.|+|.||.=++.-+
T Consensus 47 ~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 47 AAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 45555666542 22 35799999999998766543
No 148
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=25.57 E-value=29 Score=33.03 Aligned_cols=43 Identities=21% Similarity=0.197 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhC
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYL 195 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~l 195 (320)
--+++|++|..+-.-+-++++|.|-|-||.-|+.-+...++++
T Consensus 132 Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri 174 (300)
T KOG4391|consen 132 DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRI 174 (300)
T ss_pred cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhe
Confidence 3679999999765556678999999999976655554444443
No 149
>CHL00024 psbI photosystem II protein I
Probab=25.41 E-value=39 Score=22.80 Aligned_cols=12 Identities=50% Similarity=0.747 Sum_probs=11.2
Q ss_pred ccccCCCCCCCC
Q 020893 104 SGILSNNASLNP 115 (320)
Q Consensus 104 ~Gils~~~~~NP 115 (320)
-|.+|+|+..||
T Consensus 21 fGFlsnDp~RnP 32 (36)
T CHL00024 21 FGFLSNDPGRNP 32 (36)
T ss_pred ccccCCCCCCCC
Confidence 599999999999
No 150
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=25.29 E-value=40 Score=22.99 Aligned_cols=13 Identities=38% Similarity=0.646 Sum_probs=11.6
Q ss_pred ccccCCCCCCCCC
Q 020893 104 SGILSNNASLNPD 116 (320)
Q Consensus 104 ~Gils~~~~~NP~ 116 (320)
-|.+|+|+..||.
T Consensus 21 FGflsnDP~RnP~ 33 (38)
T PRK02655 21 FGFLSSDPTRNPG 33 (38)
T ss_pred cccCCCCCCCCCC
Confidence 5999999999993
No 151
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=25.13 E-value=1.6e+02 Score=28.91 Aligned_cols=27 Identities=11% Similarity=0.434 Sum_probs=21.0
Q ss_pred CCccceeEEeeeChhhHHHHhhhHHHHhhCCC
Q 020893 166 LANARKALLSGCSAGGLATFLHCDEFTKYLPN 197 (320)
Q Consensus 166 l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~ 197 (320)
..+.++|+|+|.+|- +..++|++.+|.
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999997763 356999999984
No 152
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=25.09 E-value=85 Score=30.71 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=38.5
Q ss_pred ceEEeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCC-CceEEEeccccc
Q 020893 145 SLYFRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN-NASVKCLSDAGF 209 (320)
Q Consensus 145 ~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~-~a~v~~l~DSG~ 209 (320)
.++.....-.-+...+|.+ ++=++.|.|.|+ ++.-+-.+++.+++ ..-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLAR------EEGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHH------HhCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 4555555555566666764 245788888886 45556678888874 445788899985
No 153
>PRK15222 putative pilin structural protein SafD; Provisional
Probab=24.96 E-value=1.1e+02 Score=27.17 Aligned_cols=63 Identities=27% Similarity=0.398 Sum_probs=40.4
Q ss_pred CCCCCceEEeecCCCCCccEEEEeecccccCChhhhhhhccCCCC-CccccccccccccccCCCCCCCCCc
Q 020893 48 DGSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQTRRG-STRYMTKYEIFSGILSNNASLNPDF 117 (320)
Q Consensus 48 DGSp~~yy~~~g~G~gs~kwlI~leGGG~C~~~~tC~~r~~t~lG-Ss~~~~~~~~~~Gils~~~~~NP~f 117 (320)
+|-.|+.|+-.|.....+++-|=++|.||--|..+ -.| .+..-+++..|.=+.+.++..+|+-
T Consensus 78 ~gg~p~~Yil~G~~ds~h~LrVRl~G~GW~pd~~~-------g~Giv~~~~e~~~~FdVv~DGnQ~v~~d~ 141 (156)
T PRK15222 78 AGNTPTVLLLSGQQDPRHHIQVRLEGEGWQPDTVS-------GRGAILRTAADNASFSVVVDGNQEVPADT 141 (156)
T ss_pred cCCCccEEEEECCCCCcceEEEEecCCCccCCCCC-------CceeEEecCCcceEEEEEEeCCEecCCCe
Confidence 45455666666655567899999999999887752 222 1222233455666667777777754
No 154
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=24.82 E-value=1.2e+02 Score=25.79 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=21.8
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
+.+.++.+++ .++..+ +.+.|.|.||.=++..+.
T Consensus 30 ~~~~~~~~~~-~l~~~~-~~~vG~S~Gg~~~~~~a~ 63 (230)
T PF00561_consen 30 LAADLEALRE-ALGIKK-INLVGHSMGGMLALEYAA 63 (230)
T ss_dssp HHHHHHHHHH-HHTTSS-EEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCCC-eEEEEECCChHHHHHHHH
Confidence 4444444544 223333 999999999987776654
No 155
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=24.68 E-value=1.1e+02 Score=29.40 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=15.3
Q ss_pred hhhccCCCeEEeecchhH
Q 020893 259 ALRYITTPFFILNSAYDV 276 (320)
Q Consensus 259 ~~~~i~tP~Fiv~s~YD~ 276 (320)
.++.|+.|++||+..-|.
T Consensus 274 ~l~~i~~P~Lii~G~~D~ 291 (349)
T PLN02385 274 QLEEVSLPLLILHGEADK 291 (349)
T ss_pred hcccCCCCEEEEEeCCCC
Confidence 356789999999999995
No 156
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=24.67 E-value=94 Score=28.75 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHH
Q 020893 150 GQKIWEAIILDLLPKGLANARKALLSGCSAGGLAT 184 (320)
Q Consensus 150 G~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga 184 (320)
++.-+++.+++.+. +..+-.-+||+|+|-|+.-.
T Consensus 76 ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~l 109 (207)
T PF11288_consen 76 AYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMHL 109 (207)
T ss_pred hHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHHH
Confidence 45556666776665 45666679999999999643
No 157
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=24.67 E-value=66 Score=29.03 Aligned_cols=26 Identities=19% Similarity=0.401 Sum_probs=17.4
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeCh
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSA 179 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SA 179 (320)
+++++++|++..--++.+++|.|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67888999876556778999999995
No 158
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.55 E-value=40 Score=31.00 Aligned_cols=22 Identities=32% Similarity=0.638 Sum_probs=14.9
Q ss_pred eeEEeeeChhhHHHHhhhHHHHhhCC
Q 020893 171 KALLSGCSAGGLATFLHCDEFTKYLP 196 (320)
Q Consensus 171 ~vllsG~SAGGlga~l~~d~v~~~lp 196 (320)
..+++|||.||+= +-.+.=+.|
T Consensus 102 s~~~sgcsmGayh----A~nfvfrhP 123 (227)
T COG4947 102 STIVSGCSMGAYH----AANFVFRHP 123 (227)
T ss_pred Cccccccchhhhh----hhhhheeCh
Confidence 3789999999964 444444445
No 159
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=24.31 E-value=1.9e+02 Score=25.26 Aligned_cols=19 Identities=21% Similarity=0.333 Sum_probs=16.3
Q ss_pred hhhhccCCCeEEeecchhH
Q 020893 258 YALRYITTPFFILNSAYDV 276 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD~ 276 (320)
..++.|+.|+++++...|.
T Consensus 225 ~~l~~i~~P~lii~G~~D~ 243 (288)
T TIGR01250 225 DKLSEIKVPTLLTVGEFDT 243 (288)
T ss_pred HHhhccCCCEEEEecCCCc
Confidence 3567899999999999995
No 160
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.19 E-value=1.1e+02 Score=29.75 Aligned_cols=59 Identities=19% Similarity=0.210 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhhcCCCcc--ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCCc
Q 020893 150 GQKIWEAIILDLLPKGLANA--RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDIS 217 (320)
Q Consensus 150 G~~n~~avl~~L~~~~l~~a--~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~~ 217 (320)
|+.-+++|-+++. .++.. -+++|.|.|-|++|+---.+.+.++..+ .|..++.-.+..+
T Consensus 89 ~~aL~~aV~~~~~--~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~-------vdGalw~GpP~~s 149 (289)
T PF10081_consen 89 ARALFEAVYARWS--TLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDR-------VDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHHHH--hCCcccCCeEEEeccCccccchhhhhccHHHhhhh-------cceEEEeCCCCCC
Confidence 4566777777665 46654 4799999999999987777777766542 3445554444433
No 161
>PRK03592 haloalkane dehalogenase; Provisional
Probab=23.74 E-value=2.1e+02 Score=26.21 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=22.9
Q ss_pred ceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccc
Q 020893 170 RKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDA 207 (320)
Q Consensus 170 ~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DS 207 (320)
++++|.|.|.||.=++..+ ...|..++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998776543 345654444444454
No 162
>PLN02872 triacylglycerol lipase
Probab=23.59 E-value=1.2e+02 Score=30.55 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=26.1
Q ss_pred eHHHHHHHHHHHHhhcCCCccceeEEeeeChhhHHHH
Q 020893 149 RGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATF 185 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~ 185 (320)
.+..-+.++|+++++. . .+++.+.|+|.||.-++
T Consensus 142 ~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 142 LALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHH
Confidence 4445788999998752 2 36899999999998765
No 163
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=23.38 E-value=1e+02 Score=30.67 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHH
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEF 191 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v 191 (320)
..+++.|+.+... +-++|+|.|+|.||+=+..-..+.
T Consensus 104 ~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhc
Confidence 4566677766542 267999999999998776655544
No 164
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=23.24 E-value=1.1e+02 Score=29.92 Aligned_cols=65 Identities=25% Similarity=0.299 Sum_probs=44.1
Q ss_pred EEeHHHHHHHHHHHHhhc------CCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccccccCCCC
Q 020893 147 YFRGQKIWEAIILDLLPK------GLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGFFLDERDI 216 (320)
Q Consensus 147 ~frG~~n~~avl~~L~~~------~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~fld~~~~ 216 (320)
+|.=..-++.+..+|++. -.+.++.=+|+|.|-||+.+++-.-.-=++| -.+++=||.|.+.+..
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~F-----G~V~s~Sps~~~~~~~ 218 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERF-----GHVLSQSGSFWWTPLD 218 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhh-----ceeeccCCccccCccc
Confidence 334455677777787752 3446788899999999999887543322333 3567888988877654
No 165
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=23.23 E-value=67 Score=31.65 Aligned_cols=39 Identities=28% Similarity=0.416 Sum_probs=24.6
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCC
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN 197 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~ 197 (320)
+-+++..|.. ....+|+|.|+|.||-=+ -.-.....+|.
T Consensus 133 ~~~~i~~~fg---e~~~~iilVGHSmGGaIa--v~~a~~k~lps 171 (343)
T KOG2564|consen 133 FGAVIKELFG---ELPPQIILVGHSMGGAIA--VHTAASKTLPS 171 (343)
T ss_pred HHHHHHHHhc---cCCCceEEEeccccchhh--hhhhhhhhchh
Confidence 3366666653 345679999999998544 22234456674
No 166
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=22.99 E-value=1.8e+02 Score=26.83 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=22.7
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
...+-++.++. ..++ .++|+|+|=||.=|.+-+-.+.+
T Consensus 70 ~A~~yl~~~~~-~~~~--~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 70 SALAYLKKIAK-KYPG--KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHH-hCCC--CEEEEEechhhHHHHHHHHHccH
Confidence 33344444443 2333 59999999999766555554333
No 167
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.64 E-value=89 Score=31.64 Aligned_cols=31 Identities=32% Similarity=0.567 Sum_probs=21.9
Q ss_pred HHHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 156 AIILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 156 avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
-|++.|.++++. + =+++|.|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p--~iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-P--NVISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-C--CEEEEECHHHHHHHHHHc
Confidence 456777766654 2 259999999998776654
No 168
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=22.52 E-value=94 Score=29.67 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=21.5
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
||+.|.++|++ -=+++|.|||++=+.+.+-
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 45666666665 4578999999987766654
No 169
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=22.14 E-value=1.9e+02 Score=23.78 Aligned_cols=18 Identities=39% Similarity=0.482 Sum_probs=15.6
Q ss_pred hhhhccCCCeEEeecchh
Q 020893 258 YALRYITTPFFILNSAYD 275 (320)
Q Consensus 258 ~~~~~i~tP~Fiv~s~YD 275 (320)
...+.++.|++++...+|
T Consensus 215 ~~~~~~~~P~l~i~g~~d 232 (282)
T COG0596 215 AALARITVPTLIIHGEDD 232 (282)
T ss_pred hhhccCCCCeEEEecCCC
Confidence 456777899999999999
No 170
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=22.00 E-value=1.8e+02 Score=29.63 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=36.4
Q ss_pred EeHHHHHHHHHHHHhhcCCC-ccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEeccccc
Q 020893 148 FRGQKIWEAIILDLLPKGLA-NARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAGF 209 (320)
Q Consensus 148 frG~~n~~avl~~L~~~~l~-~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG~ 209 (320)
+.-..-+++|+..... .++ ..+.+||-|.|-||+-+. +.+..+|. ++- ++-|+-|
T Consensus 289 ~n~~nA~DaVvQfAI~-~Lgf~~edIilygWSIGGF~~~----waAs~YPd-Vka-vvLDAtF 344 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQ-VLGFRQEDIILYGWSIGGFPVA----WAASNYPD-VKA-VVLDATF 344 (517)
T ss_pred ccchHHHHHHHHHHHH-HcCCCccceEEEEeecCCchHH----HHhhcCCC-ceE-EEeecch
Confidence 3345567788877665 344 567899999999998765 45667883 442 2346643
No 171
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.96 E-value=1.2e+02 Score=29.86 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=38.0
Q ss_pred cccEEEEecCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhhc--CCCccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 119 NWNRVKIRYCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPK--GLANARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 119 nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~--~l~~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
+|..|.+.-.+ +|.|-.... | =|=..-+.+.+++|... |..+.++|+|.|+|-|..-++........
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~S-----L-~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTSS-----L-DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S-------H-HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcch-----h-hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 69998888655 344433210 0 01144578889999874 34578999999999999988876665543
No 172
>PRK03204 haloalkane dehalogenase; Provisional
Probab=21.75 E-value=1.6e+02 Score=27.32 Aligned_cols=49 Identities=14% Similarity=0.113 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhhHHHHhhCCCCceEEEecccc
Q 020893 154 WEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKCLSDAG 208 (320)
Q Consensus 154 ~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d~v~~~lp~~a~v~~l~DSG 208 (320)
+.+.+.+++++ + +.++++|.|+|.||.=++..+- ..|..++-.++.+++
T Consensus 87 ~~~~~~~~~~~-~-~~~~~~lvG~S~Gg~va~~~a~----~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 87 HARVIGEFVDH-L-GLDRYLSMGQDWGGPISMAVAV----ERADRVRGVVLGNTW 135 (286)
T ss_pred HHHHHHHHHHH-h-CCCCEEEEEECccHHHHHHHHH----hChhheeEEEEECcc
Confidence 44445555542 2 3367999999999975544332 334333333444544
No 173
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.72 E-value=94 Score=29.26 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=19.4
Q ss_pred HHHHHhhcCCCcc-ceeEEeeeChhhHHHHhhh
Q 020893 157 IILDLLPKGLANA-RKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 157 vl~~L~~~~l~~a-~~vllsG~SAGGlga~l~~ 188 (320)
|++-|++++..-- +--.++|.|||++-+...+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 4555555432211 1246899999999877664
No 174
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.14 E-value=1.3e+02 Score=28.48 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=22.7
Q ss_pred eHHHHHHHHHHHHhhcCCCccc--eeEEeeeChhhHHHHhhh
Q 020893 149 RGQKIWEAIILDLLPKGLANAR--KALLSGCSAGGLATFLHC 188 (320)
Q Consensus 149 rG~~n~~avl~~L~~~~l~~a~--~vllsG~SAGGlga~l~~ 188 (320)
|| ..--.+|+.|.+++ ++.. ==+++|.||||+=+...+
T Consensus 13 RG-i~~~~vL~~Le~~~-~~~~~~fD~i~GTSaGaiia~~la 52 (288)
T cd07213 13 KG-IVQLVLLKRLAEEF-PSFLDQIDLFAGTSAGSLIALGLA 52 (288)
T ss_pred HH-HHHHHHHHHHHHhC-cccccceeEEEEeCHHHHHHHHHH
Confidence 44 23445666776542 2211 237899999998765543
No 175
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=21.08 E-value=1e+02 Score=31.20 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=20.1
Q ss_pred HHHHHhhcCCCccceeEEeeeChhhHHHHhhhH
Q 020893 157 IILDLLPKGLANARKALLSGCSAGGLATFLHCD 189 (320)
Q Consensus 157 vl~~L~~~~l~~a~~vllsG~SAGGlga~l~~d 189 (320)
|++-|.++|+.-- +++|+|||++=+.+.+.
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 4555665554432 59999999987666554
No 176
>PRK13690 hypothetical protein; Provisional
Probab=21.07 E-value=1.1e+02 Score=27.91 Aligned_cols=28 Identities=25% Similarity=0.399 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhhcCCCccceeEEeeeCh
Q 020893 152 KIWEAIILDLLPKGLANARKALLSGCSA 179 (320)
Q Consensus 152 ~n~~avl~~L~~~~l~~a~~vllsG~SA 179 (320)
..++.++++|++..--++.+++|.|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 4577888899875555677899999984
No 177
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=20.96 E-value=1.9e+02 Score=29.26 Aligned_cols=78 Identities=21% Similarity=0.160 Sum_probs=46.1
Q ss_pred ccccEEEEecCCCcccCCCCccccCCcceEEeHHHHHHHHHHHHhhcCCCccceeEEeee---------------ChhhH
Q 020893 118 YNWNRVKIRYCDGASFAGNAKFDNGTSSLYFRGQKIWEAIILDLLPKGLANARKALLSGC---------------SAGGL 182 (320)
Q Consensus 118 ~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~L~~~~l~~a~~vllsG~---------------SAGGl 182 (320)
.+|..++||=..|.+--|+.-.. -.=-=..|+..+...|.++.+ .-++|++||. |.|.+
T Consensus 143 ~~~G~~ii~P~~g~la~~~~g~g-----r~~~~~~I~~~~~~~~~~~~l-~gk~vlITgG~T~E~ID~VR~isN~SSG~~ 216 (399)
T PRK05579 143 RSRGVEIIGPASGRLACGDVGPG-----RMAEPEEIVAAAERALSPKDL-AGKRVLITAGPTREPIDPVRYITNRSSGKM 216 (399)
T ss_pred HHCCCEEECCCCccccCCCcCCC-----CCCCHHHHHHHHHHHhhhccc-CCCEEEEeCCCccccccceeeeccCCcchH
Confidence 46778888877776655543210 000114566666665543334 3468999999 99988
Q ss_pred HHHhhhHHHHhhCCCCceEEEec
Q 020893 183 ATFLHCDEFTKYLPNNASVKCLS 205 (320)
Q Consensus 183 ga~l~~d~v~~~lp~~a~v~~l~ 205 (320)
|..+--. .....++|.++.
T Consensus 217 G~aiA~~----l~~~Ga~V~~v~ 235 (399)
T PRK05579 217 GYALARA----AARRGADVTLVS 235 (399)
T ss_pred HHHHHHH----HHHCCCEEEEeC
Confidence 8665332 222367777664
No 178
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=20.86 E-value=4.6e+02 Score=26.75 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=57.9
Q ss_pred CCccEEEEeecccccCChhhhhhhccCCCCCccccccccccccccCCCCCCCCCcc--cccEEEE--ecCCCcccCCCCc
Q 020893 63 GARNWLLQFEGGGWCNDIPSCLERAQTRRGSTRYMTKYEIFSGILSNNASLNPDFY--NWNRVKI--RYCDGASFAGNAK 138 (320)
Q Consensus 63 gs~kwlI~leGGG~C~~~~tC~~r~~t~lGSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--pYCdGd~~~G~~~ 138 (320)
..+-++|.|+||=-|-+..-... .+|--.....+.. | -...-..||.=+ ..|+||| |-=+|-++.-+..
T Consensus 64 ~~~P~~lWlnGGPG~SS~~g~~~----e~GP~~~~~~~~~--~-~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~ 136 (433)
T PLN03016 64 KEDPLLIWLNGGPGCSCLGGIIF----ENGPVGLKFEVFN--G-SAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPI 136 (433)
T ss_pred ccCCEEEEEcCCCcHHHHHHHHH----hcCCceeeccccC--C-CCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCC
Confidence 46789999999966665443322 2332211000000 1 001234466211 2566777 3333444332211
Q ss_pred cccCCcceEEeHHHHHHHHHHHHhhcCCC--ccceeEEeeeChhhHHHHhhhHHHHh
Q 020893 139 FDNGTSSLYFRGQKIWEAIILDLLPKGLA--NARKALLSGCSAGGLATFLHCDEFTK 193 (320)
Q Consensus 139 ~~~~~~~l~frG~~n~~avl~~L~~~~l~--~a~~vllsG~SAGGlga~l~~d~v~~ 193 (320)
. +.+. . -....+.+.+..++.. ++ ....+.|+|.|-||.=+..-+.+|.+
T Consensus 137 ~-~~~d-~-~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 137 D-KTGD-I-SEVKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred C-ccCC-H-HHHHHHHHHHHHHHHh--ChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 0 1100 0 1113445555555532 33 24579999999999766666666654
No 179
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=20.75 E-value=1.3e+02 Score=28.55 Aligned_cols=20 Identities=20% Similarity=0.381 Sum_probs=17.4
Q ss_pred hhhhhccCCCeEEeecchhH
Q 020893 257 QYALRYITTPFFILNSAYDV 276 (320)
Q Consensus 257 q~~~~~i~tP~Fiv~s~YD~ 276 (320)
-..+|.|+-|.||++-.-|.
T Consensus 209 r~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 209 RLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred hhhcccccCCeeEeeCCcCC
Confidence 36789999999999998875
No 180
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=20.32 E-value=47 Score=35.61 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=32.3
Q ss_pred EeHHHHHHHHHHHHhhcCCCccceeEEeeeChhhH
Q 020893 148 FRGQKIWEAIILDLLPKGLANARKALLSGCSAGGL 182 (320)
Q Consensus 148 frG~~n~~avl~~L~~~~l~~a~~vllsG~SAGGl 182 (320)
++..+-+.||.++|..+|...|+++=+-|.|=|||
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGL 512 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGL 512 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCce
Confidence 45677899999999999999999999999999997
No 181
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=20.08 E-value=1.4e+02 Score=29.80 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcCCCccceeEEeeeChhhHHHHhhh
Q 020893 153 IWEAIILDLLPKGLANARKALLSGCSAGGLATFLHC 188 (320)
Q Consensus 153 n~~avl~~L~~~~l~~a~~vllsG~SAGGlga~l~~ 188 (320)
-+.++++.+..+ .+ -.+++|.|+|.||+-++..+
T Consensus 193 Dl~~~l~~l~~~-~~-~~~i~lvGhSmGG~ial~~a 226 (395)
T PLN02652 193 DTEAFLEKIRSE-NP-GVPCFLFGHSTGGAVVLKAA 226 (395)
T ss_pred HHHHHHHHHHHh-CC-CCCEEEEEECHHHHHHHHHH
Confidence 456667766542 22 23699999999999887644
Done!