BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020897
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28955|NTAN1_PIG Protein N-terminal asparagine amidohydrolase OS=Sus scrofa GN=NTAN1
PE=1 SV=3
Length = 310
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI---V 114
P +YV QRE A P V +G+D+ATTC +V+R+ N T + H D + V
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSVCILGSDDATTCHIVVLRHTGNGATCLTHCDGTDTKAEV 102
Query: 115 DIGLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLV 174
+ + + S DH L V+L+GGF SD S L +L+
Sbjct: 103 SLIMSSIKSF-SDHTQRGRLGVHLVGGF-----------------SDDRQLSQKLTHQLL 144
Query: 175 DTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDE 234
R+++ H+ TL V N + +++ N +PI +G V T + ASF R P+E
Sbjct: 145 SEFDRQEDDIHLVTLCVTELNDREENE-NHFPIIYGIAVNVKTAEIYRASF--PDRGPEE 201
Query: 235 MVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRR 294
+R RV + G ++ YD +T++ I P W H+ LQQ D++IL
Sbjct: 202 ELRAARVLT-------GGPMISIYDAKTEQLRIGPYSWMPFP-HVDFWLQQ-DDKQILEN 252
Query: 295 CSTSPSAEGPDFVENLR 311
STSP AE P FVE++R
Sbjct: 253 LSTSPLAEPPHFVEHIR 269
>sp|Q64311|NTAN1_MOUSE Protein N-terminal asparagine amidohydrolase OS=Mus musculus
GN=Ntan1 PE=2 SV=3
Length = 310
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 35/257 (13%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI---V 114
P +YV QRE A P + +G+D+ATTC +V+R+ N T + H D + V
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIVVLRHTGNGATCLTHCDGSDTKAEV 102
Query: 115 DIGLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLV 174
+ + + S +H L+V+L+GGF SD S L +L+
Sbjct: 103 PLIMSSIKSF-SEHAECGRLEVHLVGGF-----------------SDDRQLSQKLTHQLL 144
Query: 175 DTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDE 234
++ + H+ TL V N + +++ N +PI +G V T + ASF R P+E
Sbjct: 145 SEFDKQDDDIHLVTLCVTELNDREENE-NHFPIIYGIAVNIKTAEIYRASFQ--DRGPEE 201
Query: 235 MVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRR 294
+R R + G ++ YD +T++ I PC WT + LQQ D++IL
Sbjct: 202 QLRAARALA-------GGPMISIYDAKTEQLRIGPCSWTPFP-QVDFWLQQ-DDKQILES 252
Query: 295 CSTSPSAEGPDFVENLR 311
STSP AE P FVE++R
Sbjct: 253 LSTSPLAEPPHFVEHIR 269
>sp|Q96AB6|NTAN1_HUMAN Protein N-terminal asparagine amidohydrolase OS=Homo sapiens
GN=NTAN1 PE=1 SV=3
Length = 310
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 33/256 (12%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI-VDI 116
P +YV QRE A P + +G+D+ATTC +V+R+ N T + H D + ++
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIVVLRHTGNGATCLTHCDGTDTKAEV 102
Query: 117 GLC-QMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVD 175
L + DH L+V+L+GGF SD S L +L+
Sbjct: 103 PLIMNSIKSFSDHAQCGRLEVHLVGGF-----------------SDDRQLSQKLTHQLLS 145
Query: 176 TLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEM 235
R+++ H+ TL V N + +++ N +P+ +G V T + ASF R P+E
Sbjct: 146 EFDRQEDDIHLVTLCVTELNDREENE-NHFPVIYGIAVNIKTAEIYRASFQ--DRGPEEQ 202
Query: 236 VRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRRC 295
+R R + G ++ YD +T++ I P WT H+ L Q D++IL
Sbjct: 203 LRAARTLA-------GGPMISIYDAETEQLRIGPYSWTPFP-HVDFWLHQ-DDKQILENL 253
Query: 296 STSPSAEGPDFVENLR 311
STSP AE P FVE++R
Sbjct: 254 STSPLAEPPHFVEHIR 269
>sp|Q6BGW8|TFB2_DEBHA RNA polymerase II transcription factor B subunit 2 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=TFB2 PE=3 SV=2
Length = 515
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Query: 161 DMDGYSLPLCRKL-VDTLQRRQEKFHVQTLHVLGHNTKRDSQGN---AYPIFHGFLVETC 216
D+D + P RK D+L+R ++ LH++ + DS G+ +P F +
Sbjct: 62 DLDKWCKPTSRKFQFDSLKR------LRALHLI----EEDSSGSHIRLHPTFRQNFRDCL 111
Query: 217 TGSLSPASFDGTSRCPDEMVRRIRVTSSYEDTSWNGKL 254
TGS + +F S PDE I+ S+ W L
Sbjct: 112 TGSQARNAFGNLSTTPDEQSVSIKFLDSFALQKWESIL 149
>sp|C3MVH6|SYI_SULIM Isoleucine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=ileS PE=3 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 6.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 25 DILVALLE-HPVLVSASHSFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVG 83
D+L++LL + +S FKS + KV P+ S + +EY ++ P ++DY+
Sbjct: 851 DVLLSLLNAKDIEISKIEGFKSFSKYKVE-----PNRS----IIGKEYKSMSPKILDYIR 901
Query: 84 TDEATTCVGLVIRNRRNRMTSIAHMDNPEIV 114
+ + ++ N+ +A +DN +++
Sbjct: 902 NNSDIIAIDIL-----NKKQHVARIDNVDVI 927
>sp|C3N5S5|SYI_SULIA Isoleucine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=ileS PE=3 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 6.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 25 DILVALLE-HPVLVSASHSFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVG 83
D+L++LL + +S FKS + KV P+ S + +EY ++ P ++DY+
Sbjct: 851 DVLLSLLNAKDIEISKIEGFKSFSKYKVE-----PNRS----IIGKEYKSMSPKILDYIR 901
Query: 84 TDEATTCVGLVIRNRRNRMTSIAHMDNPEIV 114
+ + ++ N+ +A +DN +++
Sbjct: 902 NNSDIIAIDIL-----NKKQHVARIDNVDVI 927
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,151,781
Number of Sequences: 539616
Number of extensions: 5060942
Number of successful extensions: 12179
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 12162
Number of HSP's gapped (non-prelim): 12
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)