Your job contains 1 sequence.
>020903
MATKVQSLARPVSEQRAILGPTGNRVRASQDPKRKTEVPKRPKKPAPKIPEPVIRNNASV
DSSCSSESSTSSAASAKRMENSRRSVTAKRNGVKNMKVVPHASAEIPEASPMNSGPIKRC
DWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFDN
FDISSVSQFTEKKLLSLKVNGSLLLSEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFVNH
APVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCFRY
QQCNADAKKDLKTKIEEMKN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020903
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 862 3.3e-86 1
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 617 2.3e-62 2
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 602 2.9e-62 2
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 593 4.2e-61 2
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 506 1.8e-48 1
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 491 6.9e-47 1
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 491 6.9e-47 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 447 3.2e-42 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 446 4.0e-42 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 413 1.3e-38 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 359 6.7e-33 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 352 3.7e-32 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 350 6.0e-32 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 330 7.9e-30 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 330 7.9e-30 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 309 1.3e-27 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 282 9.7e-25 1
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 167/321 (52%), Positives = 212/321 (66%)
Query: 1 MATKVQSLARPVSEQRAILGPTGNRVRASQ-DPKRKTEVXXXXXXXXXXXXXXVIRNNXX 59
+ +K++S +P+ E RAIL TGNR + ++ + +K ++ +N
Sbjct: 3 IVSKLRSPVKPIDESRAILCSTGNRFKVTKTEMTKKPQLNPRVTKSPATKKPD---SNFS 59
Query: 60 XXXXXXXXXXXXXXXXXKRMENSRRSVT-AKRNGVKNMKVVPHASAEIPEASPMNSGPIK 118
NS + T +KRNGV+ + V + A + + SP GP+K
Sbjct: 60 VSTDDSSSSSSSSERSSVNTTNSGKVTTPSKRNGVEKLNNVVASVAVVEDISPKIPGPVK 119
Query: 119 RCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLF 178
RC WITPNSDP+Y+ FHDEEWGVPV DD+KLFELLVFSQALAE SWP+IL RRD FRKLF
Sbjct: 120 RCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKLF 179
Query: 179 DNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFV 238
+ FD S+++QFTE E KLRAIVENAK +LKV+QEFGSFS YCW FV
Sbjct: 180 EEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRFV 239
Query: 239 NHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCF 298
NH P+RNG+RY RQVPVK+PKAE ISKD+MQ+GFRCVGPTV+YSF+Q SGIVNDHL CF
Sbjct: 240 NHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTACF 299
Query: 299 RYQQCNADAKKDLKTKIEEMK 319
RYQ+CN + +++ K+ E K
Sbjct: 300 RYQECNVETERETKSHETETK 320
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 617 (222.3 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 115/210 (54%), Positives = 148/210 (70%)
Query: 94 KNMKVVPHASAEIPEASPMNSGPIKRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELL 153
K VV + + P P S KRC W+TPNSDP YI FHDEEWGVPV+DD++LFELL
Sbjct: 133 KPRSVVSEGALDSP---PNGSETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELL 189
Query: 154 VFSQALAELSWPAILSRRDIFRKLFDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAI 213
V S ALAE +WP ILS+R FR++F +FD +++ + E + KLRA+
Sbjct: 190 VLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAV 249
Query: 214 VENAKQMLKVQQEFGSFSKYCWNFVNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFR 273
+ENA+Q+LKV +E+GSF KY W+FV + + + FRY RQVP KTPKAE+ISKDL+++GFR
Sbjct: 250 IENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFR 309
Query: 274 CVGPTVVYSFMQVSGIVNDHLLTCFRYQQC 303
VGPTVVYSFMQ +GI NDHL +CFR+ C
Sbjct: 310 SVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339
Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 2 ATKVQSLARPVSEQRAILGPTGNR 25
A +VQS+ +E R+ LG T +
Sbjct: 4 APRVQSMNVAEAETRSTLGSTAKK 27
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 602 (217.0 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 111/203 (54%), Positives = 144/203 (70%)
Query: 118 KRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKL 177
KRC WITP +DP Y++FHDEEWGVPV+DD+KLFELL S ALAELSW ILSRR I R++
Sbjct: 145 KRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREV 204
Query: 178 FDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNF 237
F +FD +V++ + E K+R+I++N++ + K+ E GS KY WNF
Sbjct: 205 FMDFDPVAVAELNDKKLTAPGTAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNF 264
Query: 238 VNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
VN+ P ++ FRY RQVPVKT KAE ISKDL+++GFR V PTV+YSFMQ +G+ NDHL+ C
Sbjct: 265 VNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGC 324
Query: 298 FRYQQCNADAKKDLKTKIEEMKN 320
FRYQ C DA+ TK ++ KN
Sbjct: 325 FRYQDCCVDAETTTTTKAKK-KN 346
Score = 52 (23.4 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 14 EQRAILGPTGNRVRASQDPKRKTE 37
E R++LGPTGN+++ + P K E
Sbjct: 16 EFRSVLGPTGNKLQR-KPPGMKLE 38
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 593 (213.8 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 109/186 (58%), Positives = 134/186 (72%)
Query: 118 KRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKL 177
KRC WITP SD YI+FHDEEWGVPV+DD++LFELL S ALAELSW ILS+R +FR++
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193
Query: 178 FDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNF 237
F +FD ++S+ T E KLR+I+ENA Q+ K+ FGSF KY WNF
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253
Query: 238 VNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
VN P ++ FRY RQVPVKT KAELISKDL+++GFR V PTV+YSFMQ +G+ NDHL C
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCC 313
Query: 298 FRYQQC 303
FR+ C
Sbjct: 314 FRHHDC 319
Score = 50 (22.7 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 4 KVQSLARPVSEQRAILGPTGNRVRASQDPKRK 35
+V+S+ E R++LGP GN+++ Q P K
Sbjct: 6 RVRSVDSSDREFRSVLGPAGNKLQ--QKPLSK 35
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 89/192 (46%), Positives = 131/192 (68%)
Query: 118 KRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKL 177
KRC+WIT SD +Y+ FHD++WGVPVYDD LFE L S L + +W IL R++ FR+
Sbjct: 115 KRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFREA 174
Query: 178 FDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNF 237
F FD + V++ E E+++R IV+NAK + KV EFGSFS + W F
Sbjct: 175 FCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWGF 234
Query: 238 VNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
+++ P+ N F+Y+R VP+++PKAE+ISKD++++GFR VGP +V+SFMQ +G+ DHL+ C
Sbjct: 235 MDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVDC 294
Query: 298 FRYQQCNADAKK 309
FR+ C + A++
Sbjct: 295 FRHGDCVSLAER 306
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 90/203 (44%), Positives = 133/203 (65%)
Query: 102 ASAEIPEASPMNSGPI-KRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALA 160
+S +P +P N P +RC ++TP SDP+Y+++HDEEWGVPV+DD+ LFELL S A
Sbjct: 106 SSKVVPLLNP-NPNPHPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQV 164
Query: 161 ELSWPAILSRRDIFRKLFDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQM 220
W + L +R +RK F F+ V++ TE +K+R +VENAK++
Sbjct: 165 GSDWTSTLRKRHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEM--SKVRGVVENAKKI 222
Query: 221 LKVQQEFGSFSKYCWNFVNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVV 280
+++++ F S KY W FVNH P+ ++ ++PVKT K+E ISKD++++GFR VGPTVV
Sbjct: 223 VEIKKAFVSLEKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVV 282
Query: 281 YSFMQVSGIVNDHLLTCFRYQQC 303
+SFMQ +G+ NDHL+TC R+ C
Sbjct: 283 HSFMQAAGLTNDHLITCCRHAPC 305
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 88/190 (46%), Positives = 129/190 (67%)
Query: 118 KRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKL 177
KRC +IT +SDP+Y+++HD+EWGVPV+DD LFELLV + A W ++L RR+ FR+
Sbjct: 164 KRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREA 223
Query: 178 FDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNF 237
F F+ V+ F E + + A+V+NAKQ+LKV+++ GSF+KY W F
Sbjct: 224 FSGFEAELVADFNEKKIQSIVNDYGINLSQ--VLAVVDNAKQILKVKRDLGSFNKYIWGF 281
Query: 238 VNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
+ H PV + +++PVKT K+E ISKD++++GFR VGPTV++S MQ +G+ NDHL+TC
Sbjct: 282 MKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITC 341
Query: 298 FRYQQCNADA 307
R+ +C A A
Sbjct: 342 PRHLECTAMA 351
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 79/187 (42%), Positives = 124/187 (66%)
Query: 116 PIKRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFR 175
P +RC W++ +DPLYI +HD EWGVP+YDDR LFE L+ A LSW IL +R+ +R
Sbjct: 17 PKERCAWVS--NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYR 74
Query: 176 KLFDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCW 235
F+NFD S +S++ + K++A + NAK L+V++E+ +FS Y W
Sbjct: 75 DSFNNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEVKKEWRNFSDYIW 134
Query: 236 NFVNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLL 295
+FV+ P++N ++ A+Q+P ++ ++++SKDL ++GF+ VG T+ Y+FMQ G+VNDH
Sbjct: 135 HFVDGHPIQNQWKNAKQIPTRSAISDVLSKDLKKRGFKFVGSTICYAFMQAVGMVNDHTT 194
Query: 296 TCFRYQQ 302
CFRY++
Sbjct: 195 NCFRYEE 201
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 77/186 (41%), Positives = 119/186 (63%)
Query: 117 IKRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRK 176
I+RC+W +DPLY+++HD EWGVP +DDR LFE+L+ A A LSW IL +R+ +R+
Sbjct: 2 IQRCEWC--GTDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRR 59
Query: 177 LFDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWN 236
F FD +V+ ++E K+ + + NA+ +LK+++EFGS Y W
Sbjct: 60 AFAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKIREEFGSLDAYLWR 119
Query: 237 FVNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLT 296
FV+HAP N +R +P +T +++ +SKDL ++GF VG T+ Y+FMQ G+VNDH++
Sbjct: 120 FVDHAPRHNAWRSLTDIPARTEQSDAMSKDLKRRGFNFVGSTICYAFMQAVGMVNDHVVH 179
Query: 297 CFRYQQ 302
CFR+ +
Sbjct: 180 CFRHDE 185
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 72/182 (39%), Positives = 116/182 (63%)
Query: 119 RCDWI-TPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKL 177
RC W+ T D Y+ +HDEEWGVPVY+D+K+FE LV A A LSW IL +R+ +RKL
Sbjct: 8 RCPWLDTSKLD--YVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKREGYRKL 65
Query: 178 FDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNF 237
F +F+++ V++FT+ K+ A + NA + +++Q EFGSF+K+ W++
Sbjct: 66 FADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEFGSFTKFIWSY 125
Query: 238 VNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
VN+ + N + +P ++ ++KDL ++GF+ +GPT +YS +Q +G++NDH +C
Sbjct: 126 VNNETIVNNLDTIKDYVATSPISDALAKDLKKRGFKFLGPTTLYSHLQATGLINDHSNSC 185
Query: 298 FR 299
FR
Sbjct: 186 FR 187
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 68/184 (36%), Positives = 103/184 (55%)
Query: 117 IKRCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRK 176
++RC W++ DPLYI++HD EWGVP D +KLFE++ A LSW +L +R+ +R
Sbjct: 1 MERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRA 58
Query: 177 LFDNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWN 236
F FD V+ E K++AI+ NA+ L+++Q F + W+
Sbjct: 59 CFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWS 118
Query: 237 FVNHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLT 296
FVNH P ++P T ++ +SK L ++GF+ VG T+ YSFMQ G+VNDH++
Sbjct: 119 FVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVG 178
Query: 297 CFRY 300
C Y
Sbjct: 179 CCCY 182
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 120 CDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFD 179
C W P +DP+Y ++HDEEWGVP D R L+E L A LSW IL +R+ R+ FD
Sbjct: 7 CGW-APVTDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIREEFD 65
Query: 180 NFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFVN 239
FD ++++T K+ A++ NA+ L + + FS YCW +V
Sbjct: 66 EFDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNARSYLSMMEAGDDFSDYCWGYVG 125
Query: 240 HAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCFR 299
PV N ++ R+ P T + +S+DL ++GF+ VGPT+VY++ Q G+VNDH + C R
Sbjct: 126 GKPVVNKWKNFREAPTSTDWSAAMSRDLKKRGFKFVGPTIVYAWAQAVGMVNDHEVGCPR 185
Query: 300 YQ 301
++
Sbjct: 186 HK 187
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 68/185 (36%), Positives = 100/185 (54%)
Query: 119 RCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLF 178
RC+W++ DPLY +HD WG PVYD ++LF L A LSW IL ++ + + F
Sbjct: 5 RCNWVS--DDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAF 62
Query: 179 DNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFV 238
+F+ + ++ F + K+ +I+ NAK L + FS + W+FV
Sbjct: 63 ADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSFV 122
Query: 239 NHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCF 298
P N F Q+P +TP++E +SK L + GF VGPT+ Y+FMQ G+VNDHL+ C
Sbjct: 123 GGKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDCV 182
Query: 299 RYQQC 303
Y C
Sbjct: 183 AYDAC 187
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 69/187 (36%), Positives = 100/187 (53%)
Query: 120 CDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFD 179
C W + PL +HD+EWG V+DD KLFE L A A LSW +L +R+ +R+ F
Sbjct: 9 CAWAM--NHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 180 NFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFVN 239
+D+ ++Q E K+ ++ NA+ L +QQEFGS W FV
Sbjct: 67 GYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVG 126
Query: 240 HAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCFR 299
P N + VP T +++ +SK L ++GF+ VG T+ Y+FMQ G+VNDHL+ C
Sbjct: 127 GQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPN 186
Query: 300 YQQCNAD 306
+ NAD
Sbjct: 187 HS--NAD 191
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 69/187 (36%), Positives = 100/187 (53%)
Query: 120 CDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFD 179
C W + PL +HD+EWG V+DD KLFE L A A LSW +L +R+ +R+ F
Sbjct: 9 CAWAM--NHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 180 NFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFVN 239
+D+ ++Q E K+ ++ NA+ L +QQEFGS W FV
Sbjct: 67 GYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVG 126
Query: 240 HAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTCFR 299
P N + VP T +++ +SK L ++GF+ VG T+ Y+FMQ G+VNDHL+ C
Sbjct: 127 GQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPN 186
Query: 300 YQQCNAD 306
+ NAD
Sbjct: 187 HS--NAD 191
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 63/179 (35%), Positives = 94/179 (52%)
Query: 119 RCDWITPNSDPLYISFHDEEWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLF 178
RC W NS P + +HD EWG PV DDR+LFE L + LSW IL++R+ FR F
Sbjct: 13 RCRWC--NSAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTILAKRENFRAAF 70
Query: 179 DNFDISSVSQFTEXXXXXXXXXXXXXXXEAKLRAIVENAKQMLKVQQEFGSFSKYCWNFV 238
D FD + ++ + K+ A++ NA++M + E GS + Y W++
Sbjct: 71 DGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHGSLAAYVWSY- 129
Query: 239 NHAPVRNGFRYARQVPVKTPKAELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
P + + P + +SKDL ++G++ VGPT V++FMQ G+VNDH C
Sbjct: 130 --EPKPEDLPEPQTASI-IPASTAMSKDLKKRGWKFVGPTTVFAFMQAMGLVNDHARGC 185
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 76/230 (33%), Positives = 112/230 (48%)
Query: 83 RRSVTAKRNGVKNMKVVPHASAEIPEASPMNSG--PI---KRCDWITPNSDPLYISFHDE 137
+++ K N +KN KV ++ +A G P+ KRC WI+ D YI +HD
Sbjct: 52 KKTTNIKNNKIKNKKV-EEGGEDLLKAPIEKKGFKPLDSKKRCFWISLTKDEEYIHYHDN 110
Query: 138 EWGVPVYDDRKLFELLVFSQALAELSWPAILSRRDIFRKLFDNFDISS-VSQFT-EXXXX 195
EWG D ++LFE + A LSW +L +R +R F NFD V T E
Sbjct: 111 EWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYRDSFYNFDPKLIVDNITPEVIEN 170
Query: 196 XXXXXXXXXXXEAKLRAIVENAKQMLKVQ-QEFGSFSKYCWNFVNHAPVRNGFRYARQVP 254
KL+AIV+NA+ LK++ Q+ FS + W+FVN+ G R
Sbjct: 171 SLMKNTGLIRNRLKLQAIVDNARAYLKMRDQDKIEFSTFIWSFVNNKS-SIGQRVTGDTS 229
Query: 255 VKTPK-------AELISKDLMQKGFRCVGPTVVYSFMQVSGIVNDHLLTC 297
V+ + ++ +S L +KGF+ +G T +Y+FMQ GI+NDH C
Sbjct: 230 VQGSRPLTRNEVSDAMSVALKKKGFKFIGTTTLYAFMQSVGIINDHCKDC 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 272 0.00099 114 3 11 22 0.47 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 602 (64 KB)
Total size of DFA: 200 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.03u 0.13s 20.16t Elapsed: 00:00:01
Total cpu time: 20.03u 0.13s 20.16t Elapsed: 00:00:01
Start: Mon May 20 16:37:22 2013 End: Mon May 20 16:37:23 2013