Query 020906
Match_columns 320
No_of_seqs 183 out of 1691
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 06:05:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020906.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020906hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1444 Nucleotide-sugar trans 100.0 1.4E-38 3E-43 282.1 24.4 266 39-318 8-274 (314)
2 KOG1441 Glucose-6-phosphate/ph 100.0 4.9E-38 1.1E-42 284.5 14.9 262 42-317 16-281 (316)
3 PTZ00343 triose or hexose phos 100.0 1.4E-33 3E-38 263.8 32.4 266 40-318 46-323 (350)
4 KOG1442 GDP-fucose transporter 100.0 6E-36 1.3E-40 257.9 8.5 265 42-317 27-301 (347)
5 TIGR00817 tpt Tpt phosphate/ph 100.0 6.6E-31 1.4E-35 241.5 27.9 260 44-318 3-268 (302)
6 COG5070 VRG4 Nucleotide-sugar 100.0 5.1E-30 1.1E-34 215.3 15.6 255 44-316 7-269 (309)
7 KOG1443 Predicted integral mem 100.0 7.8E-29 1.7E-33 217.3 17.5 263 44-317 17-289 (349)
8 PF08449 UAA: UAA transporter 100.0 1.9E-27 4.1E-32 218.6 27.2 254 48-318 6-272 (303)
9 KOG1581 UDP-galactose transpor 99.9 1.4E-21 3.1E-26 171.9 24.3 234 70-319 47-289 (327)
10 KOG1580 UDP-galactose transpor 99.9 2.2E-22 4.7E-27 170.7 10.2 233 70-318 49-288 (337)
11 KOG1582 UDP-galactose transpor 99.8 2.4E-19 5.1E-24 155.2 16.4 261 42-318 42-307 (367)
12 TIGR00950 2A78 Carboxylate/Ami 99.8 5.6E-16 1.2E-20 139.0 26.7 230 61-318 7-239 (260)
13 PRK11272 putative DMT superfam 99.7 5.8E-15 1.3E-19 135.0 29.8 246 42-318 11-260 (292)
14 PF06027 DUF914: Eukaryotic pr 99.7 1.1E-14 2.3E-19 134.2 26.3 241 60-317 30-279 (334)
15 PRK11453 O-acetylserine/cystei 99.7 4.9E-14 1.1E-18 129.3 29.6 246 44-318 9-262 (299)
16 PLN00411 nodulin MtN21 family 99.7 6.1E-14 1.3E-18 131.3 28.8 248 53-318 23-303 (358)
17 PRK11689 aromatic amino acid e 99.7 6.4E-14 1.4E-18 128.3 27.8 239 44-318 9-262 (295)
18 KOG1583 UDP-N-acetylglucosamin 99.7 1.7E-16 3.7E-21 138.0 7.9 238 63-317 23-288 (330)
19 TIGR00688 rarD rarD protein. T 99.6 5.1E-13 1.1E-17 119.8 27.6 247 44-318 7-255 (256)
20 PF04142 Nuc_sug_transp: Nucle 99.6 5.7E-14 1.2E-18 124.8 20.7 196 118-318 14-228 (244)
21 PF03151 TPT: Triose-phosphate 99.6 6.2E-15 1.4E-19 121.7 12.8 117 202-318 1-128 (153)
22 PRK10532 threonine and homoser 99.6 1.2E-12 2.5E-17 119.9 28.7 235 45-318 18-256 (293)
23 PRK15430 putative chlorampheni 99.6 7.1E-13 1.5E-17 121.5 27.2 246 45-318 14-260 (296)
24 KOG3912 Predicted integral mem 99.5 1.3E-12 2.8E-17 114.2 18.7 196 122-317 87-308 (372)
25 KOG2234 Predicted UDP-galactos 99.4 2.5E-10 5.3E-15 103.8 26.1 193 118-315 89-294 (345)
26 KOG2765 Predicted membrane pro 99.4 4E-12 8.6E-17 115.4 12.8 178 121-302 159-349 (416)
27 COG0697 RhaT Permeases of the 99.4 2.1E-09 4.5E-14 97.2 29.2 241 48-318 16-262 (292)
28 TIGR03340 phn_DUF6 phosphonate 99.3 5.8E-10 1.3E-14 101.5 23.7 189 121-317 63-257 (281)
29 TIGR00776 RhaT RhaT L-rhamnose 99.1 2.5E-08 5.4E-13 91.2 24.0 233 45-317 7-258 (290)
30 KOG4510 Permease of the drug/m 98.9 2.1E-09 4.5E-14 93.8 5.0 225 45-300 41-284 (346)
31 TIGR00803 nst UDP-galactose tr 98.9 3E-08 6.6E-13 87.0 12.0 165 145-318 2-199 (222)
32 COG5006 rhtA Threonine/homoser 98.8 7.1E-06 1.5E-10 71.5 23.2 232 46-317 20-256 (292)
33 PF00892 EamA: EamA-like trans 98.7 1.7E-07 3.6E-12 73.8 10.9 117 59-191 7-124 (126)
34 COG2962 RarD Predicted permeas 98.7 4.4E-05 9.6E-10 68.1 25.7 248 43-317 8-257 (293)
35 KOG4314 Predicted carbohydrate 98.7 5.8E-08 1.3E-12 81.3 6.5 173 121-302 53-235 (290)
36 PF13536 EmrE: Multidrug resis 98.6 2.6E-07 5.7E-12 72.3 8.2 75 122-197 35-110 (113)
37 COG2510 Predicted membrane pro 98.2 9.9E-06 2.2E-10 63.4 9.4 119 59-192 19-138 (140)
38 TIGR00950 2A78 Carboxylate/Ami 98.2 6.5E-05 1.4E-09 67.1 15.4 125 45-188 134-259 (260)
39 KOG2766 Predicted membrane pro 98.1 9.8E-07 2.1E-11 76.8 1.6 228 55-308 30-266 (336)
40 PRK15051 4-amino-4-deoxy-L-ara 97.9 7.5E-05 1.6E-09 58.2 9.2 64 129-192 45-108 (111)
41 PLN00411 nodulin MtN21 family 97.8 0.0009 1.9E-08 63.0 15.1 122 61-193 207-328 (358)
42 PF03151 TPT: Triose-phosphate 97.7 0.0012 2.6E-08 54.0 13.7 136 54-192 11-152 (153)
43 PRK11272 putative DMT superfam 97.7 0.002 4.4E-08 58.9 15.5 110 74-195 177-287 (292)
44 PF06800 Sugar_transport: Suga 97.5 0.015 3.2E-07 52.2 18.3 117 119-239 43-172 (269)
45 PRK10532 threonine and homoser 97.5 0.0057 1.2E-07 55.9 15.3 69 124-192 211-280 (293)
46 PRK11689 aromatic amino acid e 97.4 0.0043 9.4E-08 56.8 14.2 76 118-193 212-287 (295)
47 PRK11453 O-acetylserine/cystei 97.4 0.0066 1.4E-07 55.6 15.4 79 117-195 210-289 (299)
48 PRK02971 4-amino-4-deoxy-L-ara 97.2 0.0021 4.6E-08 51.4 8.5 71 125-195 51-124 (129)
49 TIGR03340 phn_DUF6 phosphonate 97.2 0.0027 5.9E-08 57.6 10.0 66 125-190 215-280 (281)
50 TIGR00817 tpt Tpt phosphate/ph 97.2 0.0062 1.3E-07 55.8 12.0 132 58-193 160-293 (302)
51 PRK10452 multidrug efflux syst 97.1 0.0024 5.1E-08 50.3 7.7 70 124-193 33-103 (120)
52 COG2510 Predicted membrane pro 97.0 0.0066 1.4E-07 47.8 9.1 88 203-296 5-92 (140)
53 PTZ00343 triose or hexose phos 97.0 0.035 7.6E-07 52.1 15.8 64 129-192 284-347 (350)
54 PRK15430 putative chlorampheni 97.0 0.024 5.3E-07 51.8 14.2 117 197-318 4-120 (296)
55 PRK09541 emrE multidrug efflux 97.0 0.0046 1E-07 48.0 7.8 69 125-193 34-103 (110)
56 PRK11431 multidrug efflux syst 96.9 0.0059 1.3E-07 46.9 8.0 68 124-191 32-100 (105)
57 PF08449 UAA: UAA transporter 96.9 0.029 6.3E-07 51.5 13.9 143 44-194 155-298 (303)
58 TIGR00688 rarD rarD protein. T 96.9 0.028 6.2E-07 50.1 13.5 115 201-318 2-117 (256)
59 PF00892 EamA: EamA-like trans 96.9 0.0053 1.1E-07 47.8 7.7 100 211-318 1-101 (126)
60 PRK10650 multidrug efflux syst 96.8 0.0087 1.9E-07 46.3 8.0 67 125-191 39-106 (109)
61 TIGR00776 RhaT RhaT L-rhamnose 96.7 0.052 1.1E-06 49.6 14.0 72 121-192 211-287 (290)
62 COG2076 EmrE Membrane transpor 96.7 0.0099 2.2E-07 45.4 7.4 68 125-192 34-102 (106)
63 COG0697 RhaT Permeases of the 96.6 0.14 3.1E-06 45.7 16.0 77 118-194 211-288 (292)
64 PF06027 DUF914: Eukaryotic pr 96.3 0.048 1E-06 50.7 11.0 60 137-196 249-308 (334)
65 PF00893 Multi_Drug_Res: Small 96.0 0.032 7E-07 41.8 6.9 57 128-184 36-93 (93)
66 PF05653 Mg_trans_NIPA: Magnes 95.9 0.045 9.7E-07 50.3 9.0 68 124-191 52-120 (300)
67 PF10639 UPF0546: Uncharacteri 95.4 0.046 1E-06 42.5 5.7 70 121-191 42-112 (113)
68 PF06800 Sugar_transport: Suga 95.1 0.51 1.1E-05 42.5 12.5 66 124-189 198-267 (269)
69 COG5006 rhtA Threonine/homoser 93.8 0.26 5.7E-06 43.5 7.2 55 135-189 224-278 (292)
70 PRK13499 rhamnose-proton sympo 93.4 6.9 0.00015 36.6 18.8 102 117-218 69-191 (345)
71 TIGR00803 nst UDP-galactose tr 92.4 1.4 3.1E-05 38.2 10.1 62 129-190 160-221 (222)
72 COG2962 RarD Predicted permeas 91.7 4 8.7E-05 37.0 11.9 113 199-317 5-118 (293)
73 PF04657 DUF606: Protein of un 91.4 5.5 0.00012 32.1 11.6 100 203-309 3-102 (138)
74 PF04142 Nuc_sug_transp: Nucle 89.3 15 0.00033 32.6 13.7 128 42-182 113-242 (244)
75 KOG2922 Uncharacterized conser 89.2 1.7 3.7E-05 39.9 7.4 67 125-191 67-134 (335)
76 KOG2765 Predicted membrane pro 86.1 3.7 8E-05 38.5 7.8 135 44-196 252-393 (416)
77 KOG4510 Permease of the drug/m 85.0 1.2 2.7E-05 39.8 4.0 69 122-190 254-322 (346)
78 KOG1441 Glucose-6-phosphate/ph 80.8 5.7 0.00012 36.8 6.8 140 43-193 163-307 (316)
79 PF13536 EmrE: Multidrug resis 76.9 24 0.00051 27.0 8.4 77 238-318 4-81 (113)
80 PRK13499 rhamnose-proton sympo 75.4 73 0.0016 29.9 14.0 69 125-194 264-342 (345)
81 KOG2234 Predicted UDP-galactos 72.1 84 0.0018 29.4 11.8 112 207-318 21-139 (345)
82 PF09930 DUF2162: Predicted tr 71.7 70 0.0015 28.1 11.1 69 120-188 101-172 (224)
83 PF04657 DUF606: Protein of un 67.1 64 0.0014 25.9 13.5 122 53-190 11-138 (138)
84 KOG1444 Nucleotide-sugar trans 62.8 46 0.00099 30.7 8.1 27 194-220 276-302 (314)
85 PF06379 RhaT: L-rhamnose-prot 58.5 66 0.0014 30.1 8.4 105 117-221 69-193 (344)
86 COG5070 VRG4 Nucleotide-sugar 56.2 28 0.00061 30.6 5.3 65 119-183 222-286 (309)
87 PF05297 Herpes_LMP1: Herpesvi 55.6 3.9 8.4E-05 36.9 0.0 97 146-243 48-148 (381)
88 PF10642 Tom5: Mitochondrial i 53.9 17 0.00038 23.7 2.8 44 15-64 5-48 (49)
89 PF03616 Glt_symporter: Sodium 53.9 2E+02 0.0043 27.2 13.9 17 61-78 236-252 (368)
90 COG4975 GlcU Putative glucose 49.7 7.8 0.00017 34.4 1.0 115 121-239 59-186 (288)
91 KOG1580 UDP-galactose transpor 49.1 25 0.00053 31.1 3.9 35 156-190 276-310 (337)
92 PF05817 Ribophorin_II: Oligos 48.4 1.5E+02 0.0032 30.5 9.9 28 12-39 514-542 (636)
93 PF11947 DUF3464: Protein of u 48.2 92 0.002 25.6 6.9 59 40-98 61-119 (153)
94 KOG4831 Unnamed protein [Funct 47.1 41 0.00088 25.8 4.3 69 122-191 54-123 (125)
95 KOG1581 UDP-galactose transpor 39.0 3.2E+02 0.0069 25.3 11.5 72 119-190 239-310 (327)
96 PF13937 DUF4212: Domain of un 30.5 2.1E+02 0.0046 20.7 5.9 47 42-88 12-61 (81)
97 KOG1582 UDP-galactose transpor 29.2 3.2E+02 0.0069 25.0 7.7 40 158-197 297-336 (367)
98 COG3238 Uncharacterized protei 28.8 3.3E+02 0.0071 22.3 10.4 103 200-308 4-106 (150)
99 COG4975 GlcU Putative glucose 27.8 37 0.0008 30.3 1.6 72 118-190 207-282 (288)
100 KOG2447 Oligosaccharyltransfer 25.1 5.2E+02 0.011 23.4 8.8 36 59-94 216-252 (287)
101 PF05399 EVI2A: Ectropic viral 21.6 3.1E+02 0.0066 23.8 5.9 7 7-13 88-94 (227)
No 1
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-38 Score=282.14 Aligned_cols=266 Identities=30% Similarity=0.486 Sum_probs=246.8
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccH
Q 020906 39 AMTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL 118 (320)
Q Consensus 39 ~~~~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (320)
+.+.+.+.+++.|+.+|+.+++.||++++.|+||...++...|.+.+.+.++++++.|.+++|+ +++
T Consensus 8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~-------------l~~ 74 (314)
T KOG1444|consen 8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRP-------------LDL 74 (314)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCC-------------cCh
Confidence 3455668899999999999999999999999998888888899999999999999999988763 567
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCccc
Q 020906 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSF 198 (320)
Q Consensus 119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~ 198 (320)
+..|+|+|++++|.++++++..+++|+|+|+++++|+.+|+++++.|..++|++++...+.++..+.+|...+...|.++
T Consensus 75 ~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf 154 (314)
T KOG1444|consen 75 RTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF 154 (314)
T ss_pred HHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh-hcCCCCcchHHHHHHHHH
Q 020906 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFS 277 (320)
Q Consensus 199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~-~~~~~~~~~~~~~~l~~s 277 (320)
+..||.|++.+.++.+.+.++.|+..+..+.+.+++++|+++++.|.+....+.+||++.. .+++.+.++.++..+.++
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998732 345557778889999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 278 CILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 278 ~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
|++|+..+|++++|.+.+|++|.+++| +|+...+.++++.
T Consensus 235 cv~gf~isy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll 274 (314)
T KOG1444|consen 235 CVMGFGISYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLL 274 (314)
T ss_pred HHHHHHHHHHHHHHHhhccccceeehh-hhhhHHHHHHHHh
Confidence 999999999999999999999999999 8888888777654
No 2
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-38 Score=284.48 Aligned_cols=262 Identities=25% Similarity=0.355 Sum_probs=228.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHH
Q 020906 42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (320)
.+....+..|++++++.++.||++++.++||+|++++.+|+.++.+.....+.+|..+.+.. .++..+
T Consensus 16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~------------~~~~~~ 83 (316)
T KOG1441|consen 16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKI------------SSKLPL 83 (316)
T ss_pred HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcc------------ccccch
Confidence 44567789999999999999999999899999999999999999999988888876543211 122457
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchH
Q 020906 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF 201 (320)
Q Consensus 122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~ 201 (320)
+.++|+|++++++++++|.|++++||+++|++|++.|++++++++++.+|++++..++++++++.|+.+++++|.++|+.
T Consensus 84 ~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~ 163 (316)
T KOG1441|consen 84 RTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLF 163 (316)
T ss_pred HHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh--cCCCCChhhHHHHHHHHHHHHHH-HHHHH-hCChhhhhcCCCCcchHHHHHHHHH
Q 020906 202 GYAVVFLANITTAIYLATIARIG--KSSGLNSFGLMWCNGVICGPLLL-LWTFL-RGDLETTINFPYLLSPGFLVVLCFS 277 (320)
Q Consensus 202 G~~~~l~s~~~~a~~~v~~~~~~--~~~~~~~~~l~~~~~~~~~~~l~-~~~~~-~ge~~~~~~~~~~~~~~~~~~l~~s 277 (320)
|+..++++.+..++++++.|+++ +++++|+.++++|+++++...++ |+... +|+.. .......++..++..++.+
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s 242 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS 242 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH
Confidence 99999999999999999999999 46789999999999999999999 87653 33322 1001112333344444544
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 278 CILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 278 ~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
++++++|.+.|++++++||+|++|.|++|+++.++.||+
T Consensus 243 -v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~ 281 (316)
T KOG1441|consen 243 -VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWL 281 (316)
T ss_pred -HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEee
Confidence 999999999999999999999999999999999999975
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.4e-33 Score=263.77 Aligned_cols=266 Identities=16% Similarity=0.138 Sum_probs=219.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHH
Q 020906 40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLK 119 (320)
Q Consensus 40 ~~~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (320)
...+..+.++.|+++|+..++.||+++++ +|+|++++++|++++++.+.++...+..+.|+.+ ..++
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~ 112 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-----------SLKL 112 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-----------CHHH
Confidence 34577888999999999999999999985 7889999999999998877666554422211100 0235
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccc
Q 020906 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD 199 (320)
Q Consensus 120 ~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~ 199 (320)
++++++|+|+++.......+.|++++++++++++|++.|+++++++++++|||++++++++++++++|+++++.+|.+++
T Consensus 113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~ 192 (350)
T PTZ00343 113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFT 192 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhH
Confidence 77899999999987777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCChhhHHHHHHHHHHHHHHHHHHHhCC--hhhhh-c----CCCCcc
Q 020906 200 FFGYAVVFLANITTAIYLATIARIGKSS-----GLNSFGLMWCNGVICGPLLLLWTFLRGD--LETTI-N----FPYLLS 267 (320)
Q Consensus 200 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~-----~~~~~~l~~~~~~~~~~~l~~~~~~~ge--~~~~~-~----~~~~~~ 267 (320)
+.|+++++++++++|+|+++.||.++++ +.++.++..+..+++.++++|+....+. +...+ + ...+..
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 9999999999999999999999998754 3677777778889999999888764322 11111 1 111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 268 ~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
...+..++.+++..++.|.++|.+++++||+|+++.+++|+++.+++|++.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~ 323 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII 323 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH
Confidence 234456778899999999999999999999999999999999999999853
No 4
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6e-36 Score=257.87 Aligned_cols=265 Identities=23% Similarity=0.290 Sum_probs=238.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc--CCCCchHHHHHHHHHHHHHHHHHHHHc-----ccccccCCCCCCCCCCCCC
Q 020906 42 RRGANAAISYMACAVLLVMFNKAALSS--YNFPCANVITLLQMISSCSFLYFLRRW-----KIINFTMGDSLMTSDSSST 114 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~--~~f~~p~~L~~~q~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 114 (320)
++...++..|..+|+++++.||++++. ...+.|.++++.|++.+..++..+.+. +.+++|..
T Consensus 27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~----------- 95 (347)
T KOG1442|consen 27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSL----------- 95 (347)
T ss_pred hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcc-----------
Confidence 344566788999999999999999985 457899999999999998888776653 22333321
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906 115 FVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194 (320)
Q Consensus 115 ~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~ 194 (320)
++|.+..++++|+++.+.+++.++|.||+|++|++|++-|+++.+|++++.++++|+|.+.....++.+++.|..+..-+
T Consensus 96 ~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdq 175 (347)
T KOG1442|consen 96 QLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQ 175 (347)
T ss_pred cccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccc
Confidence 16678899999999999999999999999999999999999999999999999999999999999999999999887766
Q ss_pred C---cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHH
Q 020906 195 D---LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFL 271 (320)
Q Consensus 195 d---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~ 271 (320)
| ...++.|.++++.++++.|+..+++||.....+-.-+.+.+|||..+....+|...+.||.+..+.+|+..+..||
T Consensus 176 E~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw 255 (347)
T KOG1442|consen 176 EGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFW 255 (347)
T ss_pred ccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHH
Confidence 6 5678999999999999999999999999887777789999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 272 ~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
..+.++|++||.+|+.+.+-||.|||+|++|.|+.|.+.+.++.+.
T Consensus 256 ~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~ 301 (347)
T KOG1442|consen 256 ILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVA 301 (347)
T ss_pred HHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988754
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=6.6e-31 Score=241.45 Aligned_cols=260 Identities=17% Similarity=0.154 Sum_probs=212.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (320)
..+-+..|+++|++.+++||+++++ |++|.+++++|+.++.+...+..+.+..+. .+.++++++.
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 67 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKR-------------LKISSALLKL 67 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCC-------------CCCCHHHHHH
Confidence 4566889999999999999999974 789999999999999887776644332111 1145788999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHHH
Q 020906 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGY 203 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G~ 203 (320)
++|.|++++.+..++|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+++...+|.+++..|+
T Consensus 68 ~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~ 147 (302)
T TIGR00817 68 LLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGF 147 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhh-cCCC---Ccc-hHHHHHHHHHH
Q 020906 204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI-NFPY---LLS-PGFLVVLCFSC 278 (320)
Q Consensus 204 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~-~~~~---~~~-~~~~~~l~~s~ 278 (320)
++++++++++|+|.++.||..++.+.++.+++.|+++.+.+.++|.....++.+... +... ..+ ...+...+..+
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA 227 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence 999999999999999999988766789999999999999999998876554422111 1000 011 12233233333
Q ss_pred H-HHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 279 I-LAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 279 ~-~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
. +....|...|.+++++||++.++.+++|+++.+++|++.
T Consensus 228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~ 268 (302)
T TIGR00817 228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF 268 (302)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhh
Confidence 3 445567777899999999999999999999999998764
No 6
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.97 E-value=5.1e-30 Score=215.28 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=227.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (320)
...+++.|+++|+.+++.|||+++..||+....+.+.|.+++.+.+.+++..|..++| .++.|+
T Consensus 7 ~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----------------~t~aK~ 70 (309)
T COG5070 7 ELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----------------LTKAKK 70 (309)
T ss_pred cchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----------------hhhhhh
Confidence 3567899999999999999999999999999999999999999999999988877765 244689
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-------
Q 020906 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL------- 196 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~------- 196 (320)
|+|.+++...+++.+..+++|+++|.|++.|+++.+.++..+..++|.+.+-.+..+.+++++....+.++|.
T Consensus 71 WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~ 150 (309)
T COG5070 71 WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKA 150 (309)
T ss_pred hcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHH
Q 020906 197 -SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLC 275 (320)
Q Consensus 197 -~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~ 275 (320)
..| .|++|+..+++..|.|....|+..+-.+....+.+||+++++.|+++.+.+..+||+.- +......+.....+.
T Consensus 151 ~~lN-~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ 228 (309)
T COG5070 151 QILN-PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMF 228 (309)
T ss_pred cccC-CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHH
Confidence 345 69999999999999999999998887777889999999999999999999988998642 222223344467889
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhh
Q 020906 276 FSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIW 316 (320)
Q Consensus 276 ~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~ 316 (320)
++|++++...+++-||++.+|..|+|++|++.+...-+-+.
T Consensus 229 ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGl 269 (309)
T COG5070 229 ISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGL 269 (309)
T ss_pred HHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence 99999999999999999999999999999999876655443
No 7
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=7.8e-29 Score=217.28 Aligned_cols=263 Identities=19% Similarity=0.207 Sum_probs=221.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccH-HHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPL-KTLM 122 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 122 (320)
.+.-++.|+++|+++.++||+.-. +|++|.+++.+|+++-++.....++....+.++ .+...+| +++|
T Consensus 17 ~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r---------~r~~~sw~~~Lr 85 (349)
T KOG1443|consen 17 TLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPR---------ARVVLSWRDYLR 85 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCc---------cccCCcHHHHHH
Confidence 344568999999999999999885 578899999999999999888877754332221 1123555 5788
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHH
Q 020906 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFG 202 (320)
Q Consensus 123 ~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G 202 (320)
+..|+++..+.++.++|+|++|+++++|++.|+.+++|+.+++.++.-||+++.-.+.++++.+|+++.++.+.+++..|
T Consensus 86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~G 165 (349)
T KOG1443|consen 86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEG 165 (349)
T ss_pred HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC---CChhhHHHHHHHHHHHHHHHHHH-HhCChh----hhhcCCCCcc-hHHHHH
Q 020906 203 YAVVFLANITTAIYLATIARIGKSSG---LNSFGLMWCNGVICGPLLLLWTF-LRGDLE----TTINFPYLLS-PGFLVV 273 (320)
Q Consensus 203 ~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~l~~~~~~~~~~~l~~~~~-~~ge~~----~~~~~~~~~~-~~~~~~ 273 (320)
+++.++++++.++++.+.|.++++.+ -+|.+.+++..+++...++|... ++|... +.+++.+..+ ......
T Consensus 166 f~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~ 245 (349)
T KOG1443|consen 166 FFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGL 245 (349)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHH
Confidence 99999999999999999999987654 68999999999999998888765 455422 1222222211 112345
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 274 LCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 274 l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
+.+.|.++|.+..+.|.+..+||.+|.|+.|.+|.++++.++.+
T Consensus 246 i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~i 289 (349)
T KOG1443|consen 246 ISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAII 289 (349)
T ss_pred HHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999988764
No 8
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=1.9e-27 Score=218.60 Aligned_cols=254 Identities=20% Similarity=0.270 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHH
Q 020906 48 AISYMACAVLLVMFNKAALSS-YNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLP 126 (320)
Q Consensus 48 ~~~~~~~s~~~~~~NK~ll~~-~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (320)
..+|..+..-. ++++.+..+ ++.++|.++++.|++++.+.........+.+ + .++..++++++
T Consensus 6 ~~i~~~~~~~g-~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~ 69 (303)
T PF08449_consen 6 AGIFGGCCSYG-ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP----K-----------SRKIPLKKYAI 69 (303)
T ss_pred HHHHHHHHHHH-HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc----C-----------CCcChHHHHHH
Confidence 34444444443 455555554 4445899999999999999888776654311 0 01123678899
Q ss_pred HHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcc----cc---
Q 020906 127 LAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS----FD--- 199 (320)
Q Consensus 127 ~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~----~~--- 199 (320)
.++++.++..++|.|++|+|+|++++.|++.|+++++++++++|||++++++++++++++|+++++.+|.+ .+
T Consensus 70 ~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~ 149 (303)
T PF08449_consen 70 LSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSS 149 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998776531 11
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHH--hCChhhhhcCCCCcchHHHHHH
Q 020906 200 ---FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFL--RGDLETTINFPYLLSPGFLVVL 274 (320)
Q Consensus 200 ---~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~ge~~~~~~~~~~~~~~~~~~l 274 (320)
..|+.+.+++.+++|.+.+++||..++++.+++++++|++.++.++.++.... +||..+..++.. .+|..+..+
T Consensus 150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l 228 (303)
T PF08449_consen 150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYL 228 (303)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHH
Confidence 23999999999999999999999999999999999999999999999988877 788766555432 345578889
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
++.+++++..+.+.+.+++++||++.++++++|+.+++++|++.
T Consensus 229 ~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~ 272 (303)
T PF08449_consen 229 LLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVII 272 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999874
No 9
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.4e-21 Score=171.86 Aligned_cols=234 Identities=16% Similarity=0.108 Sum_probs=205.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhH
Q 020906 70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM 149 (320)
Q Consensus 70 ~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~ 149 (320)
+|..|.++.+.|-+.+.++.+.+.++.+.+.+.. .| +++..-+++...++..++..||+|++.|+
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~------------ap---l~~y~~is~tn~~s~~~~yeaLKyvSyPt 111 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGV------------AP---LYKYSLISFTNTLSSWCGYEALKYVSYPT 111 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcccccCCCC------------Cc---hhHHhHHHHHhhcchHHHHHHHHhccchH
Confidence 5889999999999999999988776654332111 12 56778899999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHHH
Q 020906 150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLANITTAIYLATI 220 (320)
Q Consensus 150 ~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------~~~~~G~~~~l~s~~~~a~~~v~~ 220 (320)
.++.|++..+.+++.+.+++|+|++..++++..++.+|+.++...+. ..++.|+.++..+.+++++.+..+
T Consensus 112 q~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQ 191 (327)
T KOG1581|consen 112 QTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQ 191 (327)
T ss_pred HHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHH
Confidence 99999999999999999999999999999999999999988765421 245899999999999999999999
Q ss_pred HHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 020906 221 ARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQ 300 (320)
Q Consensus 221 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~ 300 (320)
+++.+++++++++++++.|+++.+......+..|.+.+...+-. .+|.++..+.+-+.+|.+.+.+.|..+++.+|+++
T Consensus 192 d~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~ 270 (327)
T KOG1581|consen 192 DSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTF 270 (327)
T ss_pred HHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHH
Confidence 99999999999999999999999999888777787766555532 46778999999999999999999999999999999
Q ss_pred HHHhHhhHHHHHhhhhhhc
Q 020906 301 TICGSFYHWTRLDTIWWAS 319 (320)
Q Consensus 301 sv~g~~K~~~~i~~S~~~~ 319 (320)
.++.+.|+++.+++|.++.
T Consensus 271 t~I~ttRk~~si~lS~i~f 289 (327)
T KOG1581|consen 271 TTIMTTRKMVSIMLSCIVF 289 (327)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998763
No 10
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.2e-22 Score=170.73 Aligned_cols=233 Identities=16% Similarity=0.105 Sum_probs=199.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhH
Q 020906 70 NFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPM 149 (320)
Q Consensus 70 ~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~ 149 (320)
.|.+...|.++|+.+..+..-++...+... + +|...-+.+..+++.|.+....+|.+++|+|.|+
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~--~-------------~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT 113 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLIRKKT--E-------------IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPT 113 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheeecccc--c-------------ccCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence 388899999999999998876654432210 0 1111135678899999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-------ccchHHHHHHHHHHHHHHHHHHHHHH
Q 020906 150 YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL-------SFDFFGYAVVFLANITTAIYLATIAR 222 (320)
Q Consensus 150 ~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~-------~~~~~G~~~~l~s~~~~a~~~v~~~~ 222 (320)
..+-|++.|+.+++++.++.+++++|+++++++.+++|++++.+.|- +.-..|-++.++|.-..++....++|
T Consensus 114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdr 193 (337)
T KOG1580|consen 114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDR 193 (337)
T ss_pred HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHH
Confidence 99999999999999999999999999999999999999999866532 22247889999999999999999999
Q ss_pred hhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906 223 IGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302 (320)
Q Consensus 223 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv 302 (320)
+...++-+.-++++|+|+++...+.....++||..+.+.|.. ..|..|+.+.+-++++...+++.|..+...+|+|-||
T Consensus 194 ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~-RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi 272 (337)
T KOG1580|consen 194 IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQ-RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI 272 (337)
T ss_pred HHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHH-hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence 988888899999999999999999888889999766555433 4566788888899999999999999999999999999
Q ss_pred HhHhhHHHHHhhhhhh
Q 020906 303 CGSFYHWTRLDTIWWA 318 (320)
Q Consensus 303 ~g~~K~~~~i~~S~~~ 318 (320)
+.+.|+..+|+.|+++
T Consensus 273 vTTTRKfFTil~SVll 288 (337)
T KOG1580|consen 273 VTTTRKFFTILISVLL 288 (337)
T ss_pred EeehHHHHHHHHHHHH
Confidence 9999999999999875
No 11
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.4e-19 Score=155.22 Aligned_cols=261 Identities=14% Similarity=0.071 Sum_probs=214.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCC-chHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHH
Q 020906 42 RRGANAAISYMACAVLLVMFNKAALSSYNFP-CANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKT 120 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~-~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (320)
.+.+++....++.-+.-=.+..++++..+|. +.+.+|+.|+++-..+.++.... + ++ +++.+||
T Consensus 42 ~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~--~~---------k~r~iP~-- 106 (367)
T KOG1582|consen 42 TQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--I--QT---------KRRVIPW-- 106 (367)
T ss_pred hhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--e--cc---------cceecch--
Confidence 3455555556666665566788999988996 99999999999876555443221 1 11 1123664
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc----
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---- 196 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---- 196 (320)
|.+..++.+-..+..++|.|+.|+|.|...+.|++..+.+++.+.++-|+|+.+..+.+..++++|.++++..|.
T Consensus 107 -rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP 185 (367)
T KOG1582|consen 107 -RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP 185 (367)
T ss_pred -hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC
Confidence 677788888888999999999999999999999999999999999999999999999999999999999988775
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHH
Q 020906 197 SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF 276 (320)
Q Consensus 197 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~ 276 (320)
+||..|+...-.+.+++|+-...+++.++.++-++.|+++|..-++.++++..+..+||....+.+-..+.........+
T Consensus 186 NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~ 265 (367)
T KOG1582|consen 186 NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFL 265 (367)
T ss_pred CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHH
Confidence 67889999999999999999999999999988899999999999999999998889999877666533333334445555
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 277 SCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 277 s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
-+..++....+....|+..+|++...+.+.|+.+++++|.++
T Consensus 266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfll 307 (367)
T KOG1582|consen 266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLL 307 (367)
T ss_pred HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHH
Confidence 566677777777788999999999999999999999999864
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.77 E-value=5.6e-16 Score=139.00 Aligned_cols=230 Identities=17% Similarity=0.096 Sum_probs=175.2
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHH-HHHHHHHHhh
Q 020906 61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAV-AYLLYMVVSV 139 (320)
Q Consensus 61 ~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si-~~~~~~~~~~ 139 (320)
..|+.+++ . ..|..+.+.|++.+.+.+....+.+ + ++++++..+..+. .+.+...+.+
T Consensus 7 ~~k~~~~~-~-~~~~~~~~~r~~~~~l~l~~~~~~~----~---------------~~~~~~~~~~~~~~~~~l~~~~~~ 65 (260)
T TIGR00950 7 VIGQYLEG-Q-VPLYFAVFRRLIFALLLLLPLLRRR----P---------------PLKRLLRLLLLGALQIGVFYVLYF 65 (260)
T ss_pred HHHHHHhc-C-CCHHHHHHHHHHHHHHHHHHHHHhc----c---------------CHhHHHHHHHHHHHHHHHHHHHHH
Confidence 45998874 2 3578899999998887766554332 1 1122344555554 4677888899
Q ss_pred hhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc-CcccchHHHHHHHHHHHHHHHHHH
Q 020906 140 ESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSFDFFGYAVVFLANITTAIYLA 218 (320)
Q Consensus 140 ~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~-d~~~~~~G~~~~l~s~~~~a~~~v 218 (320)
.|+++++++...++.++.|+++.+++.+++|||++++++.++.+.++|+.+.... +.+.+..|+.++++++++++.+.+
T Consensus 66 ~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~ 145 (260)
T TIGR00950 66 VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTV 145 (260)
T ss_pred HHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999886433 345567899999999999999999
Q ss_pred HHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHH-HHHHhhccch
Q 020906 219 TIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYS-IFLNTTLNSA 297 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~-~~~~i~~~Sa 297 (320)
+.|+..++.+.++.....+...++.+++.+.....++... .+...|..++..++++....+. .+..+++.++
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 218 (260)
T TIGR00950 146 LYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDP 218 (260)
T ss_pred HHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999877554445455545677777777777655443211 1334566666677766555444 4888999999
Q ss_pred hHHHHHhHhhHHHHHhhhhhh
Q 020906 298 VTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 298 lt~sv~g~~K~~~~i~~S~~~ 318 (320)
.+.++...+.++..++++++.
T Consensus 219 ~~~s~~~~~~pv~~~ll~~~~ 239 (260)
T TIGR00950 219 SAASILALAEPLVALLLGLLI 239 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999764
No 13
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.74 E-value=5.8e-15 Score=135.04 Aligned_cols=246 Identities=10% Similarity=0.034 Sum_probs=182.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHH
Q 020906 42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTL 121 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (320)
-..+...++|+...+.. |+.+++ . .|..++++|++++.+++......++.+. .+++++
T Consensus 11 ~~~~~~~~iWg~~~~~~----K~~~~~--~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~---------------~~~~~~ 68 (292)
T PRK11272 11 GALFALYIIWGSTYLVI----RIGVES--W-PPLMMAGVRFLIAGILLLAFLLLRGHPL---------------PTLRQW 68 (292)
T ss_pred HHHHHHHHHHhhHHHHH----HHHhcc--C-CHHHHHHHHHHHHHHHHHHHHHHhCCCC---------------CcHHHH
Confidence 34466777888888777 988863 4 4899999999999887766543322110 123455
Q ss_pred HHHHHHHHHH-HHHHHHhhhhh-cCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc-Cccc
Q 020906 122 MHTLPLAVAY-LLYMVVSVESV-RGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR-DLSF 198 (320)
Q Consensus 122 ~~~~~~si~~-~~~~~~~~~sl-~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~-d~~~ 198 (320)
++....+++. .....+.+.+. ++++++...++-.+.|+++.+++.+ +|||++++++.++++.++|+.+...+ +.+.
T Consensus 69 ~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~ 147 (292)
T PRK11272 69 LNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSG 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccccc
Confidence 6666777654 45556677888 9999999999999999999999986 69999999999999999999886533 3455
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHH
Q 020906 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC 278 (320)
Q Consensus 199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~ 278 (320)
+..|+.+.+++++++|.|.++.||..++ ++.....+...++.+.+.+.....++.. ....+...|..+++.+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~l~ 219 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERL-----TALPTLSGFLALGYLA 219 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcc-----cccCCHHHHHHHHHHH
Confidence 6689999999999999999999987542 3445556666777776666654433311 1112344567777777
Q ss_pred HHHHHHHHH-HHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 279 ILAFFLNYS-IFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 279 ~~~~~~~~~-~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+++....+. .+..+++.++.+.++...+.++...+++++.
T Consensus 220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~ 260 (292)
T PRK11272 220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL 260 (292)
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665554 4788999999999999999999999999764
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.71 E-value=1.1e-14 Score=134.16 Aligned_cols=241 Identities=12% Similarity=0.060 Sum_probs=169.6
Q ss_pred HHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhh
Q 020906 60 MFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSV 139 (320)
Q Consensus 60 ~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~ 139 (320)
..+.++-++ +++.|.+-+++-++.-.++-......++ +. ++ ..+..++.+++.+.++++-....++.+
T Consensus 30 ~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~---~~-~~-------~~~~~~~~~w~y~lla~~Dv~aN~~~v 97 (334)
T PF06027_consen 30 TFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRR---GF-KK-------WLKVLKRPWWKYFLLALLDVEANYLVV 97 (334)
T ss_pred HHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcc---cc-cc-------chhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 344555554 7888877666665544332221111111 10 00 000112345667778999999999999
Q ss_pred hhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------ccchHHHHHHHHHH
Q 020906 140 ESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------SFDFFGYAVVFLAN 210 (320)
Q Consensus 140 ~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------~~~~~G~~~~l~s~ 210 (320)
.|++|++++..|++.+.+.+++++++++++|+|+++.+++++++.++|+.+....|. +....|++++++++
T Consensus 98 ~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a 177 (334)
T PF06027_consen 98 LAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGA 177 (334)
T ss_pred HHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988765542 12478999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 020906 211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNYSIFL 290 (320)
Q Consensus 211 ~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~ 290 (320)
+++|+++++.|+..+++ +..+.+....+++.++..+..... |+.+..+++ +++..+..++..+++-+......-.
T Consensus 178 ~lya~~nV~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~--w~~~~~~~~v~~~~~lf~~y~l~p~ 252 (334)
T PF06027_consen 178 ILYAVSNVLEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH--WTSQVIGLLVGYALCLFLFYSLVPI 252 (334)
T ss_pred HHHHHHHHHHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC--CChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999854 778888888888888877655432 444443332 2334444445445444444444466
Q ss_pred HhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 291 NTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 291 ~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
+++.+||+.+++.--.-+.-.++++++
T Consensus 253 ~l~~ssAt~~nLsLLTsd~~ali~~i~ 279 (334)
T PF06027_consen 253 VLRMSSATFFNLSLLTSDFYALIIDIF 279 (334)
T ss_pred HHHhCccceeehHHHHhhHHHHHHHHH
Confidence 789999988887666656665555543
No 15
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.70 E-value=4.9e-14 Score=129.35 Aligned_cols=246 Identities=13% Similarity=0.119 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (320)
.+++.++|+...... |..+++ ++ |..+.++|+.++.+......+. + + .++ +.
T Consensus 9 ~l~~~~~Wg~~~~~~----k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~~-----~---~----------~~~---~~ 60 (299)
T PRK11453 9 ALLVVVVWGLNFVVI----KVGLHN--MP-PLMLAGLRFMLVAFPAIFFVAR-----P---K----------VPL---NL 60 (299)
T ss_pred HHHHHHHHhhhHHHH----HHHHhc--CC-HHHHHHHHHHHHHHHHHHHhcC-----C---C----------Cch---HH
Confidence 467778888888776 988863 54 8999999999876554433211 0 0 122 23
Q ss_pred HHHHHHHH-HHHHHHhhhhhcC-cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC---ccc
Q 020906 124 TLPLAVAY-LLYMVVSVESVRG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD---LSF 198 (320)
Q Consensus 124 ~~~~si~~-~~~~~~~~~sl~~-~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d---~~~ 198 (320)
.+..++.. .....+...++++ .+.+...++-++.|+++.+++++++|||+++++++++++.++|+.+...++ .+.
T Consensus 61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~ 140 (299)
T PRK11453 61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHV 140 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcch
Confidence 44445433 2333355677877 688999999999999999999999999999999999999999998765432 234
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CChhhHHHHHHHHHHHHHHHHHHH-hCChhhhhcCCCCcchHHHHHHHH
Q 020906 199 DFFGYAVVFLANITTAIYLATIARIGKSSG-LNSFGLMWCNGVICGPLLLLWTFL-RGDLETTINFPYLLSPGFLVVLCF 276 (320)
Q Consensus 199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~~-~ge~~~~~~~~~~~~~~~~~~l~~ 276 (320)
+..|+.+++.+++++|.|.++.||..++.+ ........+...++...+...... +++....... ...++..|..++.
T Consensus 141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 219 (299)
T PRK11453 141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL-VTIDMTTILSLMY 219 (299)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh-ccCCHHHHHHHHH
Confidence 567999999999999999999999765432 222334444444443333322222 2222100111 1234566888888
Q ss_pred HHHHHHHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 277 SCILAFFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 277 s~~~~~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
.++++....+.. +..+++.+|.+.++...+.++..+++|++.
T Consensus 220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~ 262 (299)
T PRK11453 220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL 262 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766 677899999999999999999999999864
No 16
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.69 E-value=6.1e-14 Score=131.33 Aligned_cols=248 Identities=11% Similarity=0.032 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHH
Q 020906 53 ACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYL 132 (320)
Q Consensus 53 ~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~ 132 (320)
.+..++..+-|..++ .+.+ |..+.++|+.++.+++..+...++.+.+ +.+.+++++..+...+++..
T Consensus 23 ~~~~~~~~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----------~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 23 TSVVGISTLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRS-----------LPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred HHHHHHHHHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cCcchHHHHHHHHHHHHHHH
Confidence 345556666799996 3664 6779999999998777655432211100 00124566677777777665
Q ss_pred HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHH------hccccCcchhhHHHHHhhhhhhhcc-cCc---------
Q 020906 133 LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFL------AGQKYTPPVVGSVGLIILGAFVAGA-RDL--------- 196 (320)
Q Consensus 133 ~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~------~~~~~s~~~~~sl~li~~Gv~l~~~-~d~--------- 196 (320)
....+.+.+++|++.+...++-++.|+++++++.++ +|||.++++++++++.++|+.+... ++.
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 555588999999999999999999999999999999 6999999999999999999987532 111
Q ss_pred --------------ccc-hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHH-HHhCC-hhhh
Q 020906 197 --------------SFD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGD-LETT 259 (320)
Q Consensus 197 --------------~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~ge-~~~~ 259 (320)
+.+ ..|..+.+.+++++|+|.++.||..+++. +......+...++.....+.. ..+++ ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~- 247 (358)
T PLN00411 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV- 247 (358)
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCccc-
Confidence 112 45999999999999999999999877542 223444454444433333332 22221 111
Q ss_pred hcCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 260 INFPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 260 ~~~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+ ....+... ..+++.++...+....-++++++.+|...++..++.+++.+++|++.
T Consensus 248 ~--~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~ 303 (358)
T PLN00411 248 W--IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF 303 (358)
T ss_pred c--eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH
Confidence 1 11123332 23444555433322234789999999999999999999999999874
No 17
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.68 E-value=6.4e-14 Score=128.35 Aligned_cols=239 Identities=13% Similarity=0.080 Sum_probs=165.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMH 123 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (320)
.+.++++|+...... |..+++ +| |..+.++|+..+.+++....+. +..+ + .+ .+.
T Consensus 9 ~l~a~~~Wg~~~~~~----k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~~-----~~~~---------~-~~---~~~ 63 (295)
T PRK11689 9 GLIAILLWSTMVGLI----RGVSES--LG-PVGGAAMIYSVSGLLLLLTVGF-----PRLR---------Q-FP---KRY 63 (295)
T ss_pred HHHHHHHHHHHHHHH----HHHHcc--CC-hHHHHHHHHHHHHHHHHHHccc-----cccc---------c-cc---HHH
Confidence 356777888776655 998874 44 8999999999988777654321 1000 0 11 123
Q ss_pred HHHHHHHHHHHHHHhhhhhc----CcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---
Q 020906 124 TLPLAVAYLLYMVVSVESVR----GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--- 196 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~----~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~--- 196 (320)
.+..++.+.....+.+.+++ +.+.....++.++.|+++.+++++++|||++++++.++++..+|+++...++.
T Consensus 64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~ 143 (295)
T PRK11689 64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS 143 (295)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence 33334444555555556654 45777788999999999999999999999999999999999999988654432
Q ss_pred --------ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcch
Q 020906 197 --------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP 268 (320)
Q Consensus 197 --------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~ 268 (320)
+.+..|+.+++.+++++|.|.++.||..++ .++....+ ..+...+.+.....++.. ...++
T Consensus 144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~~------~~~~~ 212 (295)
T PRK11689 144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQPA------MVFSL 212 (295)
T ss_pred hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCcc------ccCCH
Confidence 123569999999999999999999998654 35554432 222233333222333221 11233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 269 GFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 269 ~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
..|..+++.++.+....+.-+..+++.+|...++...+.+++.++++++.
T Consensus 213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~ 262 (295)
T PRK11689 213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL 262 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH
Confidence 44656666665544445556889999999999999999999999998764
No 18
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.7e-16 Score=137.98 Aligned_cols=238 Identities=17% Similarity=0.219 Sum_probs=180.9
Q ss_pred HHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhhhh
Q 020906 63 KAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVESV 142 (320)
Q Consensus 63 K~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~sl 142 (320)
+.+.++ +-.....+|+.|+++...--.+.. . +++..+ .++|. |.++..-..|.....++|.++
T Consensus 23 E~L~~~-~pgsgNLITFaqFlFia~eGlif~--s--kf~~~k---------~kipl---k~Y~i~V~mFF~vnv~NN~al 85 (330)
T KOG1583|consen 23 ELLVRN-EPGSGNLITFAQFLFIATEGLIFT--S--KFFTVK---------PKIPL---KDYAITVAMFFIVNVTNNYAL 85 (330)
T ss_pred HHHHHh-CCCCeeehHHHHHHHHHHhceeee--c--cccccC---------CCCch---hhhheehheeeeeeeecccee
Confidence 555543 334567899999998776544432 1 121111 12553 455555555556667999999
Q ss_pred cC-cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc---Ccc--------------cc--hHH
Q 020906 143 RG-VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR---DLS--------------FD--FFG 202 (320)
Q Consensus 143 ~~-~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~---d~~--------------~~--~~G 202 (320)
++ +|+|.+.+.|+.+++.++++++++.|+|++.+++.|++++.+|+++++.. |.. +. ..|
T Consensus 86 ~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iG 165 (330)
T KOG1583|consen 86 KFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIG 165 (330)
T ss_pred eecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHH
Confidence 98 69999999999999999999999999999999999999999999997542 210 11 369
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHH-HHhCChhhhhcC-----C--CCcchHHHHHH
Q 020906 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWT-FLRGDLETTINF-----P--YLLSPGFLVVL 274 (320)
Q Consensus 203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~ge~~~~~~~-----~--~~~~~~~~~~l 274 (320)
+.+..++.+.+|...+++|+..++++-++-|.+||++.+++|..+... -+..++..++.. | +-.-|..|..+
T Consensus 166 i~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL 245 (330)
T KOG1583|consen 166 IALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL 245 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH
Confidence 999999999999999999999999999999999999999999887331 011112222211 1 11236678999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
+.+++..++.--..+.+..+++++|.+++-++|+.+..++|++
T Consensus 246 l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Sii 288 (330)
T KOG1583|consen 246 LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSII 288 (330)
T ss_pred HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheee
Confidence 9999988887777788889999999999999999999999975
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.63 E-value=5.1e-13 Score=119.82 Aligned_cols=247 Identities=9% Similarity=-0.025 Sum_probs=164.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-cccccccCCCCCCCCCCCCCcccHH-HH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKIINFTMGDSLMTSDSSSTFVPLK-TL 121 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 121 (320)
.+.+..+|+...+.. |+ .. +. .|..+.++|++++.+.+..... .++.+... ++ .+..+++ ..
T Consensus 7 ~i~a~~~wg~~~~~~----k~-~~--~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~-~~-------~~~~~~~~~~ 70 (256)
T TIGR00688 7 SLLASFLFGYMYYYS----KL-LK--PL-PATDILGHRMIWSFPFMLLSVTLFRQWAALI-ER-------LKRIQKRPLI 70 (256)
T ss_pred HHHHHHHHHHHHHHH----HH-hc--cC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHH-HH-------HhCcccchHH
Confidence 456677788887766 88 43 34 4889999999998876554332 12110000 00 0001111 12
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchH
Q 020906 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFF 201 (320)
Q Consensus 122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~ 201 (320)
......+++......+.+.++++++++..+++..+.|+++++++.+++|||+++++++++++.++|+++....+.+.+
T Consensus 71 ~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~-- 148 (256)
T TIGR00688 71 LSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP-- 148 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch--
Confidence 334556666778888999999999999999999999999999999999999999999999999999987643322211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (320)
Q Consensus 202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~ 281 (320)
.+++.+++++|.|.+..||..++ +..+.... .....|...+.... +++... +.......|..++..++++
T Consensus 149 --~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~l~~~g~~t 218 (256)
T TIGR00688 149 --WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQ-TDFATV---QQTNPFPIWLLLVLAGLIT 218 (256)
T ss_pred --HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHH-hccCcc---cccCchhHHHHHHHHHHHH
Confidence 35788999999999999887542 22232221 22333333322221 121110 0111112456666666665
Q ss_pred HHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 282 FFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 282 ~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
.......+...++.+|...++...+.++..++++++.
T Consensus 219 ~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 219 GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 5555566888999999999999999999999988753
No 20
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.63 E-value=5.7e-14 Score=124.75 Aligned_cols=196 Identities=12% Similarity=0.056 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-
Q 020906 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL- 196 (320)
Q Consensus 118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~- 196 (320)
+++..++...+++|.+...+.+.++++++.+++|+++.+.+++|+++.++++|||.++++|.++++.++|+.+...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4566777888999999999999999999999999999999999999999999999999999999999999998643211
Q ss_pred --------c--------cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhh
Q 020906 197 --------S--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTI 260 (320)
Q Consensus 197 --------~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~ 260 (320)
+ ....|++..+++++++|+..++.||++|+.+.+.+.........+.++.++.... .++++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~~ 172 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAIS 172 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-ccccccc
Confidence 1 1358999999999999999999999999988888888877788888888766443 2332222
Q ss_pred c--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 261 N--FPYLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 261 ~--~~~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+ +-+.+++..|..+...++.|... -.++|+.+...-.....+--+++.++|+++
T Consensus 173 ~~g~f~G~~~~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~l 228 (244)
T PF04142_consen 173 ESGFFHGYSWWVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLL 228 (244)
T ss_pred cCCchhhcchHHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22234555677777777766555 556788887777777777777777776653
No 21
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.62 E-value=6.2e-15 Score=121.68 Aligned_cols=117 Identities=25% Similarity=0.309 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC-----CCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhc---CCC--C-cchHH
Q 020906 202 GYAVVFLANITTAIYLATIARIGKS-----SGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTIN---FPY--L-LSPGF 270 (320)
Q Consensus 202 G~~~~l~s~~~~a~~~v~~~~~~~~-----~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~---~~~--~-~~~~~ 270 (320)
|+++++.++++.|+|+++.|+.+++ .+.++.++++|+++.+.+++++..+..++.+.... ... . .++..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999999988 68999999999999999999998877766542111 111 1 15567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 271 ~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+..++.+|++++++|++.|.+++++||+|++|+|++|+++++++|+++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~ 128 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF 128 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh
Confidence 888999999999999999999999999999999999999999999874
No 22
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.62 E-value=1.2e-12 Score=119.94 Aligned_cols=235 Identities=17% Similarity=0.050 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (320)
Q Consensus 45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (320)
+++.+.|...+. ..|+.+++ ++ |..+.++|++++.+++....+.++.+ .++++++..
T Consensus 18 ~la~~~~~~~~~----~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~~----------------~~~~~~~~~ 74 (293)
T PRK10532 18 LIAMASIQSGAS----LAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRLR----------------FAKEQRLPL 74 (293)
T ss_pred HHHHHHHHhhHH----HHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhcc----------------CCHHHHHHH
Confidence 455556665555 45999974 44 77899999999988776654321111 234556677
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc---cCcccchH
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFF 201 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~---~d~~~~~~ 201 (320)
+..++++.....+.+.+++++|.+...++..+.|+++.+++ +|++.+ ...+.+.++|+.+... +..+.+..
T Consensus 75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~ 148 (293)
T PRK10532 75 LFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLT 148 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChH
Confidence 77888777778888999999999999999999999999887 355544 4456677888876532 22234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (320)
Q Consensus 202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~ 281 (320)
|+.+++.+++++|.|.+..||..+++ ++.... +...++...+.+.....+. . ...++..|..++..++++
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~~-~~~~~~~~~l~~~~~~~~~-~------~~~~~~~~~~~l~lgv~~ 218 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGAEH--GPATVA-IGSLIAALIFVPIGALQAG-E------ALWHWSILPLGLAVAILS 218 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC--CchHHH-HHHHHHHHHHHHHHHHccC-c------ccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999987643 555554 4455666666665543322 0 112334455556677777
Q ss_pred HHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 282 FFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 282 ~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
....+.. +..+++.+|...++...+.++..++++++.
T Consensus 219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~ 256 (293)
T PRK10532 219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF 256 (293)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH
Confidence 7666654 888999999999999999999999999864
No 23
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.62 E-value=7.1e-13 Score=121.51 Aligned_cols=246 Identities=11% Similarity=-0.039 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (320)
Q Consensus 45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (320)
+++..+|....+.. |.+ . +.+ |..+.++|++++.+.+......++ +.+... ++..++++....
T Consensus 14 l~a~~~wg~~~~~~----k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~--------~~~~~~~~~~~~ 76 (296)
T PRK15430 14 LAAYFIWGIAPAYF----KLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLK--------TLIQTPQKIFML 76 (296)
T ss_pred HHHHHHHHHHHHHH----HHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHH--------HHHcCHHHHHHH
Confidence 45556666666544 875 3 354 889999999998875544332211 000000 000022333323
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccchHHHH
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDFFGYA 204 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~~G~~ 204 (320)
...++.......+.+.+++++|++...++..+.|+++++++++++|||++++++.++++..+|+.+....+.+. ..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~ 152 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PI 152 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cH
Confidence 33344566778899999999999999999999999999999999999999999999999999998864322221 15
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcch-HHHHHHHHHHHHHHH
Q 020906 205 VVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSP-GFLVVLCFSCILAFF 283 (320)
Q Consensus 205 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~-~~~~~l~~s~~~~~~ 283 (320)
+++++++++|.|.++.||..++...+......+..+++.+...+. ..+.. ... ..++ ..+..+...++.+..
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~--~~~~~~~~~~~~~~g~~t~i 225 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSST--SHM--GQNPMSLNLLLIAAGIVTTV 225 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCc--ccc--cCCcHHHHHHHHHHHHHHHH
Confidence 688899999999999988754322222333334444444333211 11100 000 1112 123344445555555
Q ss_pred HHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 284 LNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 284 ~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
..+.-+..+++.+|...++...+..+..++.+|+.
T Consensus 226 ~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~ 260 (296)
T PRK15430 226 PLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTF 260 (296)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666888999999999999999999999999864
No 24
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.52 E-value=1.3e-12 Score=114.21 Aligned_cols=196 Identities=19% Similarity=0.173 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc-----
Q 020906 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL----- 196 (320)
Q Consensus 122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~----- 196 (320)
+..+|.+++=.....+-+.+|.+++.+.+|++|....+|+-+++..+++++...++|+++..+++|++..+..|.
T Consensus 87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~ 166 (372)
T KOG3912|consen 87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD 166 (372)
T ss_pred ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence 346778888777777889999999999999999999999999999999999999999999999999998766543
Q ss_pred -----ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHH-----HhCC---------hh
Q 020906 197 -----SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTF-----LRGD---------LE 257 (320)
Q Consensus 197 -----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-----~~ge---------~~ 257 (320)
+--..|..+.+++.+.-|.+.++.+|.+++++.+|.+..-|...++..++-.... ..|+ ++
T Consensus 167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e 246 (372)
T KOG3912|consen 167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE 246 (372)
T ss_pred CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence 2236899999999999999999999999999999999999999888665543321 1121 11
Q ss_pred hhhc-CC-CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 258 TTIN-FP-YLLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 258 ~~~~-~~-~~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
+..+ +. -...|.....+...-+.-.+.|++...+.|..|+.|.++...+|+.++.++|+.
T Consensus 247 D~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~ 308 (372)
T KOG3912|consen 247 DWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIA 308 (372)
T ss_pred hHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHH
Confidence 1000 00 001122222222222233457999999999999999999999999999998875
No 25
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.42 E-value=2.5e-10 Score=103.80 Aligned_cols=193 Identities=14% Similarity=0.095 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC--
Q 020906 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-- 195 (320)
Q Consensus 118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d-- 195 (320)
+++..++...+++|.+.+-+...++.+.+.++||+.-.+..+.|.++.+++++||.++++|.++++...|+.+...+.
T Consensus 89 ~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 89 PRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred hHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 345667788888999999899999999999999999999999999999999999999999999999999999875211
Q ss_pred ---------cccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh--hcCCC
Q 020906 196 ---------LSFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT--INFPY 264 (320)
Q Consensus 196 ---------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~--~~~~~ 264 (320)
.+-.+.|+...+.+++.+++-.++.+|++|+.+.+.|-.......++.++.+.....+ |++.. ..+-+
T Consensus 169 ~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~ 247 (345)
T KOG2234|consen 169 PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFY 247 (345)
T ss_pred CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccc
Confidence 1234789999999999999999999999999888888888888888888888765543 33222 12334
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhh
Q 020906 265 LLSPGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTI 315 (320)
Q Consensus 265 ~~~~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S 315 (320)
.++...|..++.+++.|...+ .++|+.....-.....+-.+++.+.|
T Consensus 248 G~s~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S 294 (345)
T KOG2234|consen 248 GYSSIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVAS 294 (345)
T ss_pred cccHHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 467777888888888776664 34455543333333333333333333
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.40 E-value=4e-12 Score=115.43 Aligned_cols=178 Identities=19% Similarity=0.182 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc----
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---- 196 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---- 196 (320)
.|.-+-.+.++.+..++.|.||++.+|+..+++.+++-+||..++.++.+||+++.+.+++++-+.|+++.+.+|.
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~ 238 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS 238 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence 3334555566678888999999999999999999999999999999999999999999999999999999887754
Q ss_pred ----ccchHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCChhhHHHHHHHHHHHHHHHHHHH---hCChhhhhcCCCCcc
Q 020906 197 ----SFDFFGYAVVFLANITTAIYLATIARIGKSS--GLNSFGLMWCNGVICGPLLLLWTFL---RGDLETTINFPYLLS 267 (320)
Q Consensus 197 ----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~--~~~~~~l~~~~~~~~~~~l~~~~~~---~ge~~~~~~~~~~~~ 267 (320)
+-...|..+++++++++|+|.++.||...++ ++|--...-|..++.+.++.|..++ +++ +-++.|. +
T Consensus 239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~--e~F~lP~--~ 314 (416)
T KOG2765|consen 239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE--ERFELPS--S 314 (416)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc--CcccCCC--C
Confidence 2237899999999999999999999988766 4555555558888887777764432 222 2234443 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906 268 PGFLVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302 (320)
Q Consensus 268 ~~~~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv 302 (320)
..+-..++.+++..++--|.=.+..-.|||++.++
T Consensus 315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~Tl 349 (416)
T KOG2765|consen 315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTL 349 (416)
T ss_pred ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhhee
Confidence 33333333333333333343355566778776554
No 27
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.37 E-value=2.1e-09 Score=97.25 Aligned_cols=241 Identities=14% Similarity=0.104 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHH
Q 020906 48 AISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127 (320)
Q Consensus 48 ~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (320)
.+.|....... |..... ...+....+.|.....+......+.++.+.+ +.+.+ ..+..+..
T Consensus 16 ~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~ 76 (292)
T COG0697 16 GLLWGLSFIAL----KLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLR-----------PALRP--WLLLLLLA 76 (292)
T ss_pred HHHHHHHHHHH----HHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhccccc-----------ccccc--hHHHHHHH
Confidence 34454444443 555542 2234455566888777663333332211000 00011 12333444
Q ss_pred HHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHH-HHhccccCcchhhHHHHHhhhhhhhcccCcccc---hHHH
Q 020906 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEY-FLAGQKYTPPVVGSVGLIILGAFVAGARDLSFD---FFGY 203 (320)
Q Consensus 128 si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~-~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~---~~G~ 203 (320)
.+.......+.+.++++++++..+++.++.|+++.+++. +++|||++++++.++++...|+.+....+...+ ..|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~ 156 (292)
T COG0697 77 LLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGL 156 (292)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHH
Confidence 455677777889999999999999999999999999997 777999999999999999999999877655432 5899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHH-HHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906 204 AVVFLANITTAIYLATIARIGKSSGLNSFGLMWC-NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (320)
Q Consensus 204 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~ 282 (320)
.+++.+++++|.+.+..|+.. +.++....++ ... ...+........+.. ...+...|..+...++++.
T Consensus 157 ~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~ 225 (292)
T COG0697 157 LLALAAALLWALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGVFST 225 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999887 3456666553 222 111111111111111 1123344666777777776
Q ss_pred HH-HHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 283 FL-NYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 283 ~~-~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
.. .+..+...++.++...+.......+..+..+++.
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~ 262 (292)
T COG0697 226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL 262 (292)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 54 4444788999999999999988888888766653
No 28
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.34 E-value=5.8e-10 Score=101.47 Aligned_cols=189 Identities=17% Similarity=0.125 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC-cccc
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD-LSFD 199 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d-~~~~ 199 (320)
+......++.......+.+.++++.+++....+..+.|+++.+++++++||+++++++.++.+++.|+.+....+ .+.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~ 142 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHR 142 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccc
Confidence 333444445567777788999999999999999999999999999999999999999999999999998865433 2345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChh-hHHHHH---HHHH-HHHHHHHHHHhCChhhhhcCCCCcchHHHHHH
Q 020906 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSF-GLMWCN---GVIC-GPLLLLWTFLRGDLETTINFPYLLSPGFLVVL 274 (320)
Q Consensus 200 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~-~l~~~~---~~~~-~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l 274 (320)
..|+.++++++++++.|.+..|+..++. ++. ....+. .... .+.... ....++.. . ...+...+..+
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~---~~~~~~~~~~~ 214 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAALGV--PAFYSALGYLGIGFLAMGWPFLLL-YLKRHGRS--M---FPYARQILPSA 214 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhccccccch--hcccccHHHHHHHHHHHHHHHHHH-HHHHhccc--h---hhhHHHHHHHH
Confidence 6789999999999999999888764322 222 122222 1121 222221 11112210 0 01111223333
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 275 CFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 275 ~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
...++.+......-+..+++.++...+....+..+..++++++
T Consensus 215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~ 257 (281)
T TIGR03340 215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIW 257 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHH
Confidence 3444444444445578889999988888888888888888865
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.15 E-value=2.5e-08 Score=91.17 Aligned_cols=233 Identities=11% Similarity=0.036 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (320)
Q Consensus 45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (320)
+.+++.|+...+.. |++. +++.+... +..++.++.......- +.+.. .+++.+..-
T Consensus 7 lia~~~wGs~g~~~----k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~--~~~~~------------~~~~~~~~g 62 (290)
T TIGR00776 7 LIPALFWGSFVLIN----VKIG---GGPYSQTL---GTTFGALILSIAIAIF--VLPEF------------WALSIFLVG 62 (290)
T ss_pred HHHHHHHhhhHHHH----hccC---CCHHHHHH---HHHHHHHHHHHHHHHH--hCCcc------------cccHHHHHH
Confidence 56777888888765 6655 45544332 4555554444332211 11100 012223333
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHh-hHHHHHHHHHHHHhccccCcch----hhHHHHHhhhhhhhcccCcc--
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPV----VGSVGLIILGAFVAGARDLS-- 197 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks-~~p~~~~l~~~~~~~~~~s~~~----~~sl~li~~Gv~l~~~~d~~-- 197 (320)
+..++.+.....+...+.++++++....+-. +.+++..+.+.+++||+.++++ +++++++++|+++.+..+.+
T Consensus 63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~ 142 (290)
T TIGR00776 63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA 142 (290)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence 4445557777789999999999999988888 8888999999999999999999 99999999999886543211
Q ss_pred -----cc-hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH---HHH-HHHHHHHHHHhCChhhhhcCCCCcc
Q 020906 198 -----FD-FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG---VIC-GPLLLLWTFLRGDLETTINFPYLLS 267 (320)
Q Consensus 198 -----~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~---~~~-~~~l~~~~~~~ge~~~~~~~~~~~~ 267 (320)
.+ ..|+++++++.++++.|.+..|+. +.+|.+..+... .++ ..++.+. . + + ....+
T Consensus 143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-----~-~~~~~ 208 (290)
T TIGR00776 143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-----A-KPLKK 208 (290)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH---h-c-----c-cchHH
Confidence 33 689999999999999999999875 257777744433 222 2222222 0 0 0 11112
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHhh-ccchhHHHHHhHhhHHHHHhhhhh
Q 020906 268 PGFLVVLCFSCILAFFLNYSI-FLNTT-LNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 268 ~~~~~~l~~s~~~~~~~~~~~-~~~i~-~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
...+ .....|++. ...+.. +...+ +..+.+.++......+..++.|++
T Consensus 209 ~~~~-~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~ 258 (290)
T TIGR00776 209 YAIL-LNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGIL 258 (290)
T ss_pred HHHH-HHHHHHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHH
Confidence 2223 333477774 444434 46677 899999999999999999988875
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.88 E-value=2.1e-09 Score=93.77 Aligned_cols=225 Identities=11% Similarity=0.038 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccccc--ccCCCCCCCCCCCCCcccHHHHH
Q 020906 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIIN--FTMGDSLMTSDSSSTFVPLKTLM 122 (320)
Q Consensus 45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 122 (320)
++..+. ++.+.++++..|-+.. .|..+...++++-.+..+.+.-..+-. .|+. -|
T Consensus 41 ~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g-----------------~R 97 (346)
T KOG4510|consen 41 LLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPVIGPEG-----------------KR 97 (346)
T ss_pred eehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeeeecCCC-----------------cE
Confidence 344444 5555566666666553 366677777655555554433211111 1110 01
Q ss_pred HH-HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc-----ccCc
Q 020906 123 HT-LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG-----ARDL 196 (320)
Q Consensus 123 ~~-~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~-----~~d~ 196 (320)
++ +.=++.........++|++|++++-+.++...+|.||.+++++++||++++...++..+.+.||++.. .||.
T Consensus 98 ~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~ 177 (346)
T KOG4510|consen 98 KWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDT 177 (346)
T ss_pred EEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCC
Confidence 22 22244445666788999999999999999999999999999999999999999999999999998842 2221
Q ss_pred ---------ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcc
Q 020906 197 ---------SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLS 267 (320)
Q Consensus 197 ---------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~ 267 (320)
+.+..|.+.++.++++.|---+..|++-|+. +..-.+.|-+.+..+..++.....|++ ..|+.
T Consensus 178 t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~--h~~msvsyf~~i~lV~s~I~~~~ig~~----~lP~c-- 249 (346)
T KOG4510|consen 178 TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA--HAIMSVSYFSLITLVVSLIGCASIGAV----QLPHC-- 249 (346)
T ss_pred ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc--cEEEEehHHHHHHHHHHHHHHhhccce----ecCcc--
Confidence 2356788888888887776666777776643 444455566667776666655555654 23332
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHhhccchhHH
Q 020906 268 PGFLVVLCFSCILAFFLNYSI--FLNTTLNSAVTQ 300 (320)
Q Consensus 268 ~~~~~~l~~s~~~~~~~~~~~--~~~i~~~Salt~ 300 (320)
...|+.++.-|+.||..++.. -.-+++.+|...
T Consensus 250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvai 284 (346)
T KOG4510|consen 250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAI 284 (346)
T ss_pred ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeeh
Confidence 223556666678888877655 334667776543
No 31
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.86 E-value=3e-08 Score=87.03 Aligned_cols=165 Identities=16% Similarity=0.117 Sum_probs=113.8
Q ss_pred cchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc---------------------------c
Q 020906 145 VNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL---------------------------S 197 (320)
Q Consensus 145 ~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~---------------------------~ 197 (320)
+++|.+...|+..++++++.+....+||++..++++..++..|+......|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 6889999999999999999999999999999999999999999885322221 1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhC----ChhhhhcCC--CCcchHHH
Q 020906 198 FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRG----DLETTINFP--YLLSPGFL 271 (320)
Q Consensus 198 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g----e~~~~~~~~--~~~~~~~~ 271 (320)
..+.|....+.+.++.+.-.++.++..|+++.+ +|.+.+..+...+.....+ +.....+.+ ..++...|
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW 156 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence 235677777888888888889999887655333 5555444444433221111 111111111 12233334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 272 VVLCFSCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 272 ~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
..++.+++ ...+..+++|+.++.+.+++.+++++++.++|++.
T Consensus 157 ~~~~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~ 199 (222)
T TIGR00803 157 IVGLLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRL 199 (222)
T ss_pred HHHHHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444333 34457889999999999999999999999999754
No 32
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.77 E-value=7.1e-06 Score=71.51 Aligned_cols=232 Identities=16% Similarity=0.104 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-cccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906 46 NAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (320)
Q Consensus 46 ~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (320)
..+.++...+. -|.++... -|.-.+++|..++.+++....| ++. +.++++++.+
T Consensus 20 amvsiq~Gas~-----Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~-----------------r~~~~~~~~~ 74 (292)
T COG5006 20 AMVSIQSGASF-----AKSLFPLV---GAAGVTALRLAIAALILLALFRPWRR-----------------RLSKPQRLAL 74 (292)
T ss_pred HHHHHHhhHHH-----HHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHh-----------------ccChhhhHHH
Confidence 34445555554 37777633 3557899999998877665433 221 1345667888
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc---cCcccchH
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA---RDLSFDFF 201 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~---~d~~~~~~ 201 (320)
...++....++.+-+.|++.+|.+....+-.+.|+.+.++.. || .+....+.+.+.|..+..- +..+.|+.
T Consensus 75 ~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~ 148 (292)
T COG5006 75 LAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPV 148 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHH
Confidence 999999999999999999999999999999999999887763 22 3444556677778766432 23467899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH
Q 020906 202 GYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA 281 (320)
Q Consensus 202 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~ 281 (320)
|..+++.+..|++.|.+..||.-+ ..+...-+-+-..++..+.+|+.....+ +...+|.....-+..++++
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlS 219 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLS 219 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHh
Confidence 999999999999999999999875 2245555566677777777777553222 2234566566667778888
Q ss_pred HHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 282 FFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 282 ~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
..+-|+. ....++.++-++++.-.+++..--+.+++
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i 256 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLI 256 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHH
Confidence 8887776 88899999999999999998877766654
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.72 E-value=1.7e-07 Score=73.81 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=90.9
Q ss_pred HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHH-HHHHHHH
Q 020906 59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLYMVV 137 (320)
Q Consensus 59 ~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~-~~~~~~~ 137 (320)
...+|...++ ++ |...+++|+..+.+ ..........+.. ++.+.+++......+++ ......+
T Consensus 7 ~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (126)
T PF00892_consen 7 SVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPF------------KNLSPRQWLWLLFLGLLGTALAYLL 70 (126)
T ss_pred HHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccc------------cCCChhhhhhhhHhhccceehHHHH
Confidence 4567888875 44 77899999999986 4333322111100 11334555666777766 5788889
Q ss_pred hhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 138 ~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
.+.++++.+++..+++..+.|+++.+++++++||+++++++.++++++.|+.+.
T Consensus 71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875
No 34
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.67 E-value=4.4e-05 Score=68.10 Aligned_cols=248 Identities=12% Similarity=0.019 Sum_probs=157.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHccc--ccccCCCCCCCCCCCCCcccHHH
Q 020906 43 RGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKI--INFTMGDSLMTSDSSSTFVPLKT 120 (320)
Q Consensus 43 ~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 120 (320)
..++++.+|..-.. +.++-|.+-. . .+..+...|.+.+...+.......+ .+..+.. + -| +.
T Consensus 8 Gil~~l~Ay~lwG~-lp~y~kll~~---~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~--------~--~p-~~ 71 (293)
T COG2962 8 GILLALLAYLLWGL-LPLYFKLLEP---L-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLL--------K--QP-KT 71 (293)
T ss_pred hhHHHHHHHHHHHH-HHHHHHHHcc---C-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------h--Cc-HH
Confidence 34454554444443 3456677764 2 3678899999988876655433211 1111000 0 11 33
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcccch
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLSFDF 200 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~~~~ 200 (320)
+-.....+++...+.....++...-.+=....-....|++.++++.+++|||.++.+++++.+..+||..-.+.--++++
T Consensus 72 ~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpw 151 (293)
T COG2962 72 LLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPW 151 (293)
T ss_pred HHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 34445555556666666677777766667777778999999999999999999999999999999999997776666776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHH
Q 020906 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCIL 280 (320)
Q Consensus 201 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~ 280 (320)
.... =++.++.|... ||.. ++++.+-......+-.|..+.+....++-.+.. ...++..+..+++.|..
T Consensus 152 val~----la~sf~~Ygl~-RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~aG~v 220 (293)
T COG2962 152 VALA----LALSFGLYGLL-RKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVLAGLV 220 (293)
T ss_pred HHHH----HHHHHHHHHHH-HHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHHhhHH
Confidence 5443 35678888865 4433 456776666666666666666655444433211 11233346666666666
Q ss_pred HHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 281 AFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 281 ~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
+..--..-...-|+.+=-+.-+..-..+..+.+++++
T Consensus 221 TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~ 257 (293)
T COG2962 221 TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVL 257 (293)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5443222233457777778888888888888777765
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.65 E-value=5.8e-08 Score=81.25 Aligned_cols=173 Identities=17% Similarity=0.229 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc--cc
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--SF 198 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~--~~ 198 (320)
+++..|.++++....+....+++.++.+..+.+..+.-.|+.+++++.+|+++...++++.++.+.|+++.++.|- ..
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999887664 34
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH--------HHHHHHHHHHHHHhCChhhhhcCCCCcchHH
Q 020906 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG--------VICGPLLLLWTFLRGDLETTINFPYLLSPGF 270 (320)
Q Consensus 199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~--------~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~ 270 (320)
++.|+.+++.|+...|+|.+..|+...+.++. +.-.+++ ..+.|.+.. .++|- +...++.. .|
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL--~~T~V-E~~qsFA~--~P-- 203 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALIL--AFTGV-EHLQSFAA--AP-- 203 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHH--HHhch-HHHHHHhh--CC--
Confidence 68999999999999999999999998765433 2222222 122222221 23331 11111111 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 020906 271 LVVLCFSCILAFFLNYSIFLNTTLNSAVTQTI 302 (320)
Q Consensus 271 ~~~l~~s~~~~~~~~~~~~~~i~~~Salt~sv 302 (320)
|..+...+.+....|+..+.-+..+.|+-.|+
T Consensus 204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISi 235 (290)
T KOG4314|consen 204 WGCLCGAAGLSLAFNFLINFGIALLNPILISI 235 (290)
T ss_pred chhhhhHHHHHHHHhhheeehhhhhchhhhee
Confidence 55555555566666666655555566655543
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.58 E-value=2.6e-07 Score=72.29 Aligned_cols=75 Identities=11% Similarity=0.209 Sum_probs=65.4
Q ss_pred HHHHHHHHHHH-HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcc
Q 020906 122 MHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS 197 (320)
Q Consensus 122 ~~~~~~si~~~-~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~ 197 (320)
..+...+++.. .+..+...|+++.+ +...++.++.|+++.+++.+++|||++++++.++.++.+|+++..++|.+
T Consensus 35 ~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 35 LWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 34455566554 77889999999999 68889999999999999999999999999999999999999998887754
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.25 E-value=9.9e-06 Score=63.36 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=92.0
Q ss_pred HHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHH-HcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 020906 59 VMFNKAALSSYNFPCANVITLLQMISSCSFLYFLR-RWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVV 137 (320)
Q Consensus 59 ~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~ 137 (320)
.++-|.-+++. .|.+=+.+|.++..+.+.... ..|+.+-+ ..++.|.+..+..-++.-.++..+
T Consensus 19 ~iF~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~~~~------------~~~~~k~~lflilSGla~glswl~ 83 (140)
T COG2510 19 PIFAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNWQAG------------GEIGPKSWLFLILSGLAGGLSWLL 83 (140)
T ss_pred HHHHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCceecc------------cccCcceehhhhHHHHHHHHHHHH
Confidence 45669888743 367788888888776665443 33433221 113444455556666777888889
Q ss_pred hhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 138 SVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 138 ~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
.+.+++.-.+|-..-+..++|+++.+++++++|||++.++++++.++++|+.+.+
T Consensus 84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999998754
No 38
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.20 E-value=6.5e-05 Score=67.11 Aligned_cols=125 Identities=13% Similarity=0.047 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHH
Q 020906 45 ANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHT 124 (320)
Q Consensus 45 ~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (320)
+.+.+.|...+ +.+|...++++. .+..+..+++.++.+.+.........+ .. .+.+.+...
T Consensus 134 l~a~~~~a~~~----~~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~----------~~~~~~~~~ 194 (260)
T TIGR00950 134 LGSGISFALGT----VLYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGPN----PQ----------ALSLQWGAL 194 (260)
T ss_pred HHHHHHHHHHH----HHHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCCC----CC----------cchHHHHHH
Confidence 34444444444 446888765432 234556578888877666554322100 00 123444445
Q ss_pred HHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhh
Q 020906 125 LPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGA 188 (320)
Q Consensus 125 ~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv 188 (320)
+-.+++. .....+.+.++++.+++...++..+.|++++++++++++|++++.++.+..+++.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 5555553 567778999999999999999999999999999999999999999999999999986
No 39
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.12 E-value=9.8e-07 Score=76.83 Aligned_cols=228 Identities=12% Similarity=0.080 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 020906 55 AVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLY 134 (320)
Q Consensus 55 s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~ 134 (320)
+.+..+.|.++-. .+.+.|..=+++.+..-+++-..+..++. + .+. -.+++.+.+++.=.-.
T Consensus 30 ~t~~a~tss~la~-k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~---------------~~~-~~~~hYilla~~DVEa 91 (336)
T KOG2766|consen 30 ITSTAFTSSELAR-KGINAPTSQTFLNYVLLALVYGPIMLFRR-K---------------YIK-AKWRHYILLAFVDVEA 91 (336)
T ss_pred HHcchhhhHHHHh-ccCCCccHHHHHHHHHHHHHHhhHHHhhh-H---------------HHH-HHHHHhhheeEEeecc
Confidence 3444556666655 35677866555554433332222222111 0 011 2345666666655555
Q ss_pred HHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc--------ccchHHHHHH
Q 020906 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL--------SFDFFGYAVV 206 (320)
Q Consensus 135 ~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~--------~~~~~G~~~~ 206 (320)
+++--.+.+|++....+.+-.-..+.+++++++++|.|+.+.++.++++.+.|+++....|. +....|+++.
T Consensus 92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lv 171 (336)
T KOG2766|consen 92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLV 171 (336)
T ss_pred cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEE
Confidence 55566889999999999999999999999999999999999999999999999988655443 2236899999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHHHHHH
Q 020906 207 FLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAFFLNY 286 (320)
Q Consensus 207 l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~~ 286 (320)
++++-++|+-++..+.+.| +.+..+++-...+++.++..+-.+.+.. .... -+ +|+.. ...+...++-| +-+
T Consensus 172 i~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~~--~~~t-l~-w~~~i-~~yl~f~L~MF-llY 243 (336)
T KOG2766|consen 172 IAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFERH--HVST-LH-WDSAI-FLYLRFALTMF-LLY 243 (336)
T ss_pred EecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhcc--ceee-Ee-ehHHH-HHHHHHHHHHH-HHH
Confidence 9999999999999999988 4588899988888888887765332221 1111 11 22221 12222222222 233
Q ss_pred HH-HHHhhccchhHHHHHhHhhH
Q 020906 287 SI-FLNTTLNSAVTQTICGSFYH 308 (320)
Q Consensus 287 ~~-~~~i~~~Salt~sv~g~~K~ 308 (320)
+. =.++|.+|+..+++.--..+
T Consensus 244 sl~pil~k~~~aT~~nlslLTsD 266 (336)
T KOG2766|consen 244 SLAPILIKTNSATMFNLSLLTSD 266 (336)
T ss_pred HhhHHheecCCceEEEhhHhHHH
Confidence 33 45678888877665443333
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.95 E-value=7.5e-05 Score=58.19 Aligned_cols=64 Identities=19% Similarity=0.179 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
+.+....++...+++.+|++....+-++.++++.+.+++++||++++++++++.++++|+++.+
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3467788889999999999999999999999999999999999999999999999999998754
No 41
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.78 E-value=0.0009 Score=63.02 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=81.9
Q ss_pred HHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhhh
Q 020906 61 FNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAYLLYMVVSVE 140 (320)
Q Consensus 61 ~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~~~~~~~~~~ 140 (320)
+.|....+ +|.+..++++|..+..+........- +.++... . ....+...+ .++-.++.-.+...+.|+
T Consensus 207 l~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~--~~~~~~~-----~-~~~~~~~~~-~i~y~~i~t~lay~lw~~ 275 (358)
T PLN00411 207 LQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVV--EKNNPSV-----W-IIHFDITLI-TIVTMAIITSVYYVIHSW 275 (358)
T ss_pred HHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHH--ccCCccc-----c-eeccchHHH-HHHHHHHHHHHHHHHHHH
Confidence 44666553 45556778888887766554332210 0000000 0 000122211 123233433456668999
Q ss_pred hhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 141 SVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 141 sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
++++.+.+...+...+.|++.+++++++++|++++.++++.++++.|+.+...
T Consensus 276 ~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 276 TVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998754
No 42
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.74 E-value=0.0012 Score=54.00 Aligned_cols=136 Identities=13% Similarity=0.066 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhhc-----CCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHHHHHHH
Q 020906 54 CAVLLVMFNKAALSS-----YNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMHTLPL 127 (320)
Q Consensus 54 ~s~~~~~~NK~ll~~-----~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (320)
++..-.++.|..+++ .+.+ |..+..+....+++.+...... +..+..+... +. ..++...+.+.+..++..
T Consensus 11 ~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 87 (153)
T PF03151_consen 11 FSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFS-EI-FGEELSSDPNFIFLLILS 87 (153)
T ss_pred HHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHH-Hh-hhhhhcchHHHHHHHHHH
Confidence 333444556777765 4554 5666666666666665554322 1111000000 00 000000022344555666
Q ss_pred HHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 128 AVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 128 si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
+++.......+...+++++.-+++++.....+++.+++.++++|+++..++.++.+.+.|+.+.+
T Consensus 88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 67777888899999999999999999999999999999999999999999999999999998754
No 43
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.68 E-value=0.002 Score=58.86 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCCCCCCCcccHHHHHHHHHHHHH-HHHHHHHhhhhhcCcchhHHHH
Q 020906 74 ANVITLLQMISSCSFLYFLRRWKIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVA-YLLYMVVSVESVRGVNVPMYTT 152 (320)
Q Consensus 74 p~~L~~~q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~-~~~~~~~~~~sl~~~svs~~~v 152 (320)
+...+.+|+.++...+............ ...+.+.+..+.-.+++ ..+...+.+.++++.+.+...+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERLT------------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCccc------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 4567788988887765554322110000 00123444555555654 3466678999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC
Q 020906 153 LRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD 195 (320)
Q Consensus 153 ~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d 195 (320)
...+.|++.+++++++++|++++.++.+..+++.|+.+....+
T Consensus 245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998865543
No 44
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.53 E-value=0.015 Score=52.21 Aligned_cols=117 Identities=12% Similarity=0.107 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHH-HHHhhHHHHHHHHHHHHhccccCcchhh----HHHHHhhhhhhhcc
Q 020906 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLAGQKYTPPVVG----SVGLIILGAFVAGA 193 (320)
Q Consensus 119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~-v~ks~~p~~~~l~~~~~~~~~~s~~~~~----sl~li~~Gv~l~~~ 193 (320)
+.+..-+..++++.+.......|++++.+|... +.-....+.+.+.++++++|..+...+. +++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 444555777889999999999999998777544 3336778889999999999988776654 88899999999877
Q ss_pred cCccc--------chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH
Q 020906 194 RDLSF--------DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG 239 (320)
Q Consensus 194 ~d~~~--------~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~ 239 (320)
.|.+. ...|+...+++.+.+..|.+..|- .+.|+++..+=.+
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqa 172 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQA 172 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHH
Confidence 65321 256999999999999999998664 3568888776444
No 45
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.46 E-value=0.0057 Score=55.91 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=60.4
Q ss_pred HHHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 124 TLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 124 ~~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
.+-.+++- .+...+.+.++++.+.+...+.-.+.|++..++++++++|+++..++++..+++.|++...
T Consensus 211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 211 GLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 34455543 4566688999999999999999999999999999999999999999999999999988764
No 46
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.43 E-value=0.0043 Score=56.75 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
.+.+-.++-.++...+..++.+.++++.+.+.....-.+.|++..++++++++|+++..++++.++++.|+.+...
T Consensus 212 ~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 212 LPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 3444444545555566777899999999999999999999999999999999999999999999999999987643
No 47
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.43 E-value=0.0066 Score=55.63 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=65.4
Q ss_pred cHHHHHHHHHHHHHH-HHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccC
Q 020906 117 PLKTLMHTLPLAVAY-LLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARD 195 (320)
Q Consensus 117 ~~~~~~~~~~~si~~-~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d 195 (320)
+.+.+..++-++++- .+...+.+.++++.+.........+.|++..++++++++|+++..++++..++++|+.+...+.
T Consensus 210 ~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 210 DMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 344455555555543 4566688899999999999999999999999999999999999999999999999998865443
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.23 E-value=0.0021 Score=51.36 Aligned_cols=71 Identities=15% Similarity=0.230 Sum_probs=61.0
Q ss_pred HHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHH--HhccccCcchhhHHHHHhhhhhhhcccC
Q 020906 125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYF--LAGQKYTPPVVGSVGLIILGAFVAGARD 195 (320)
Q Consensus 125 ~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~--~~~~~~s~~~~~sl~li~~Gv~l~~~~d 195 (320)
+..+ +.+.+..++.+.+++..+++...-..+..+..+.+.++. ++||++++.+++++.++++|+.+...++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 3344 456788889999999999999999999998888888885 8999999999999999999999876543
No 49
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.20 E-value=0.0027 Score=57.61 Aligned_cols=66 Identities=14% Similarity=0.203 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
...++...+...+.+.++++.+++.......+.|++..+++++++||++++.++.+..+++.|+.+
T Consensus 215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 333344556777899999999999999999999999999999999999999999999999999875
No 50
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.16 E-value=0.0062 Score=55.85 Aligned_cols=132 Identities=17% Similarity=0.115 Sum_probs=81.3
Q ss_pred HHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHHHHHHHHH-HHHHHH
Q 020906 58 LVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLMHTLPLAV-AYLLYM 135 (320)
Q Consensus 58 ~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si-~~~~~~ 135 (320)
-.+..|...++.+. .|..++.+|+..+.+.+...... ...+....+. . ...........+...+..++ .+....
T Consensus 160 ~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 160 RNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGF-M--QAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHH-H--HhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 34556777763334 36778899998887666554321 1000000000 0 00000000000111112222 222223
Q ss_pred HHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 136 VVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 136 ~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
.+.+.++++++...+.+.-...|+++.++++++++|+++..++++..+++.|+.+...
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 4566899999999999999999999999999999999999999999999999988654
No 51
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.14 E-value=0.0024 Score=50.32 Aligned_cols=70 Identities=10% Similarity=0.162 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
....-+++.++.++-..+++++|++..-.. .....+.+.+.+.+++||++++.+++++.++++|+...-.
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 455566778888899999999999977766 5699999999999999999999999999999999987643
No 52
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.04 E-value=0.0066 Score=47.78 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (320)
Q Consensus 203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~ 282 (320)
.+|+++++++.++-.++.|--++ +.||...+.-.+.+...++..+...+|.++.. ...++..|..++++|+.+-
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~g 78 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAGG 78 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHHH
Confidence 58999999999999999887655 67888888888888888888888888987543 2345667889999998887
Q ss_pred HHHHHHHHHhhccc
Q 020906 283 FLNYSIFLNTTLNS 296 (320)
Q Consensus 283 ~~~~~~~~~i~~~S 296 (320)
...++-|..++.--
T Consensus 79 lswl~Yf~ALk~G~ 92 (140)
T COG2510 79 LSWLLYFRALKKGK 92 (140)
T ss_pred HHHHHHHHHHhcCC
Confidence 77777888887433
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.01 E-value=0.035 Score=52.15 Aligned_cols=64 Identities=19% Similarity=0.159 Sum_probs=55.9
Q ss_pred HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
+.+.+...+...+++.++...+.+.-.+.|+++.++++++++|+++..++++..+++.|+.+.+
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 3444444445579999999999999999999999999999999999999999999999998754
No 54
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.99 E-value=0.024 Score=51.82 Aligned_cols=117 Identities=8% Similarity=-0.083 Sum_probs=85.2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHH
Q 020906 197 SFDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCF 276 (320)
Q Consensus 197 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~ 276 (320)
+....|+.+.+++.++++...+..|.. . +++|.++.++...++.+++++.....++..+.... ..++..+.....
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 78 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLAV 78 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHHH
Confidence 334589999999999999999999653 3 57999999999999988777765554543321110 112333333344
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 277 SCILAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 277 s~~~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
.++.....+.+.+..++++++...++....-++.+.+++++.
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~ 120 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF 120 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 444445556677999999999999999999999999998764
No 55
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.97 E-value=0.0046 Score=47.96 Aligned_cols=69 Identities=12% Similarity=0.204 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHHHh-hHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTLRR-TTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~ks-~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
...-+.+.++.++-..+++.+|++..-...+ ...+.+.+.+++++||+.++.++.++.++++|++..-.
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3444567778888899999999998877754 89999999999999999999999999999999988643
No 56
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.93 E-value=0.0059 Score=46.91 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
....-+.+..+.++-..+++.+|++..-..- ....+.+.+.+++++||+.++.+++++.+++.|++..
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 3444566778888889999999999655554 5899999999999999999999999999999999874
No 57
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.90 E-value=0.029 Score=51.54 Aligned_cols=143 Identities=11% Similarity=0.112 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCCCCCCCcccHHHHH
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRW-KIINFTMGDSLMTSDSSSTFVPLKTLM 122 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (320)
+.....++.++.......+|.++.+++.+ +..+.++..+.+.+........ ...+..+..++- .+. .+.+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~------~~~-p~~~~ 226 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFI------SAH-PSVLL 226 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHH------HHh-HHHHH
Confidence 45556677777777788899999887765 5566666666666655443322 000111000000 001 13445
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906 123 HTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194 (320)
Q Consensus 123 ~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~ 194 (320)
.++..++.......+-+...+..+.-..++...+--+++++++.+++++++++..|.++.++..|..+....
T Consensus 227 ~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 227 YLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 556666666666666677788888889999999999999999999999999999999999999999876543
No 58
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.89 E-value=0.028 Score=50.10 Aligned_cols=115 Identities=12% Similarity=0.003 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhh-hcCCCCcchHHHHHHHHHHH
Q 020906 201 FGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETT-INFPYLLSPGFLVVLCFSCI 279 (320)
Q Consensus 201 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~-~~~~~~~~~~~~~~l~~s~~ 279 (320)
.|+.+.++++++++...+..|. .. +++|.++.++...++.+.++++....++..+. .+.........+..+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 5899999999999999999887 33 48999999999999988887765444543221 11111111112344566666
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 280 LAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 280 ~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+....+.+.+..++++++.+.+++...-++.+.+++++.
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~ 117 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF 117 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666777888999999999999999999999988753
No 59
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=96.88 E-value=0.0053 Score=47.76 Aligned_cols=100 Identities=20% Similarity=0.166 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHH-HHHHHHHH
Q 020906 211 ITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILA-FFLNYSIF 289 (320)
Q Consensus 211 ~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~-~~~~~~~~ 289 (320)
+++|.+.++.|+..++ .++.+..++....+.+ +++.....+..+ ....++..+......|+++ ...+...+
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAYLLYF 72 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHHHHHH
Confidence 3578888999998875 7999999999999887 655554443322 1112233345555556654 55566668
Q ss_pred HHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 290 LNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 290 ~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
...+++++...++...+..+...+++++.
T Consensus 73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~ 101 (126)
T PF00892_consen 73 YALKYISASIVSILQYLSPVFAAILGWLF 101 (126)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999998764
No 60
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.79 E-value=0.0087 Score=46.29 Aligned_cols=67 Identities=18% Similarity=0.222 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
...-+.+..+.++-..+++++|++..-.. -....+.+.+.+.+++||+.++.+++++.+++.|+...
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 44455667788888999999999965544 45889999999999999999999999999999999763
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.72 E-value=0.052 Score=49.60 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhc-CcchhHHHHHHhhHHHHHHHHHHHHhccccCcchh----hHHHHHhhhhhhhc
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVR-GVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVAG 192 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~-~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~----~sl~li~~Gv~l~~ 192 (320)
....+..++++.+...+...+++ +.+++.+.++-...|+...+.+++++||+.+++++ ++.++++.|+.+.+
T Consensus 211 ~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 211 ILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 33445577777777778889999 99999999999999999999999999999999999 99999999988754
No 62
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.68 E-value=0.0099 Score=45.44 Aligned_cols=68 Identities=15% Similarity=0.188 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhH-HHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhc
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPM-YTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAG 192 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~-~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~ 192 (320)
...-+.+..+.++-..+++++|++. |.+--....+.+.+.+++++||+.+..+++++.++++|+...-
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 4444566777788889999999996 4555678899999999999999999999999999999998653
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.59 E-value=0.14 Score=45.73 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhccc
Q 020906 118 LKTLMHTLPLAVAYL-LYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGAR 194 (320)
Q Consensus 118 ~~~~~~~~~~si~~~-~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~ 194 (320)
.+.+......+++.. ....+.+.+++..+.+.......+.|++..+.++++++|+++..++.+..+++.|+.+....
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 445566666666655 57788899999999999999999999999999999999999999999999999999886543
No 64
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.29 E-value=0.048 Score=50.75 Aligned_cols=60 Identities=18% Similarity=0.260 Sum_probs=52.4
Q ss_pred HhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc
Q 020906 137 VSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL 196 (320)
Q Consensus 137 ~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~ 196 (320)
+....++..+..+..+.-.++.+..++++.+++|+++++..+++.+++++|.++....+.
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 445667888888888888999999999999999999999999999999999999766543
No 65
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.00 E-value=0.032 Score=41.84 Aligned_cols=57 Identities=14% Similarity=0.186 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhhhhhcCcchhHH-HHHHhhHHHHHHHHHHHHhccccCcchhhHHHHH
Q 020906 128 AVAYLLYMVVSVESVRGVNVPMY-TTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLI 184 (320)
Q Consensus 128 si~~~~~~~~~~~sl~~~svs~~-~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li 184 (320)
-..+..+.++-..+++++|++.. .+......+.+.+.+..++||+.|+.++.++.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34678888899999999999976 5556799999999999999999999999998764
No 66
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.95 E-value=0.045 Score=50.30 Aligned_cols=68 Identities=18% Similarity=0.282 Sum_probs=60.4
Q ss_pred HHHHHH-HHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 124 TLPLAV-AYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 124 ~~~~si-~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
.+..|+ .+.++...+..|+.+.|.+..+-+-++..++..+++..++|||.+++.+.++.+++.|..+.
T Consensus 52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 344443 45677788899999999999999999999999999999999999999999999999999764
No 67
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.39 E-value=0.046 Score=42.46 Aligned_cols=70 Identities=11% Similarity=0.161 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
++.+.|..+=.+ .....+..+...++|...-+- +++-++|++.++++.+|..++++++++.+++.|+.++
T Consensus 42 ~~y~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 355566554433 444567788999999877764 8999999999999888888999999999999999764
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.14 E-value=0.51 Score=42.45 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchh----hHHHHHhhhhh
Q 020906 124 TLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAF 189 (320)
Q Consensus 124 ~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~----~sl~li~~Gv~ 189 (320)
-+..++++.....+...|.+.+-++..-.+..+.++...+.+.+++||+-+++++ .+++++++|.+
T Consensus 198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 3677889999989999999999999999999999999999999999999887765 34555555544
No 69
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=93.77 E-value=0.26 Score=43.54 Aligned_cols=55 Identities=13% Similarity=0.145 Sum_probs=51.0
Q ss_pred HHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhh
Q 020906 135 MVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAF 189 (320)
Q Consensus 135 ~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~ 189 (320)
..+.+.+++.+|-+.+.++-++.|.+-.+.+.++++|.++..+|+++..++.+.+
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 3378899999999999999999999999999999999999999999999887765
No 70
>PRK13499 rhamnose-proton symporter; Provisional
Probab=93.39 E-value=6.9 Score=36.65 Aligned_cols=102 Identities=13% Similarity=0.143 Sum_probs=76.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHH-HHhhHHHHHHHHHHHHhcccc---C----cchhhHHHHHhhhh
Q 020906 117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTT-LRRTTVAFTMIMEYFLAGQKY---T----PPVVGSVGLIILGA 188 (320)
Q Consensus 117 ~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v-~ks~~p~~~~l~~~~~~~~~~---s----~~~~~sl~li~~Gv 188 (320)
+.+.+..-+..++++.+.......+.+++.+|...- .-.++.+...++..++++|-. + .....+++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 334455556777888888889999999998887654 445777888888888888644 2 23557888899999
Q ss_pred hhhcc----cCc--------ccc-hHHHHHHHHHHHHHHHHHH
Q 020906 189 FVAGA----RDL--------SFD-FFGYAVVFLANITTAIYLA 218 (320)
Q Consensus 189 ~l~~~----~d~--------~~~-~~G~~~~l~s~~~~a~~~v 218 (320)
++.+. .|. +++ ..|+.+++++.+.++.|..
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 99776 332 122 5799999999999999983
No 71
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=92.42 E-value=1.4 Score=38.21 Aligned_cols=62 Identities=11% Similarity=0.045 Sum_probs=53.7
Q ss_pred HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906 129 VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 129 i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
+.......+-...+++.+.-+..+.-.+.++++.+++.++++++++...+.+..++..|+.+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 34444555667888999888999999999999999999999999999999999999998754
No 72
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=91.72 E-value=4 Score=36.96 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=78.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHH
Q 020906 199 DFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSC 278 (320)
Q Consensus 199 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~ 278 (320)
+..|+++++.+.+.++.--.+.|-+. +.++.|+..+..+++.|+++......+.+.+..+ -..+|..+..+.+++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~a 79 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALTA 79 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHHH
Confidence 34799999999999999888877653 5689999999999999999988777787776654 234565566665555
Q ss_pred HHHHHHHHHH-HHHhhccchhHHHHHhHhhHHHHHhhhhh
Q 020906 279 ILAFFLNYSI-FLNTTLNSAVTQTICGSFYHWTRLDTIWW 317 (320)
Q Consensus 279 ~~~~~~~~~~-~~~i~~~Salt~sv~g~~K~~~~i~~S~~ 317 (320)
.+- ..|+.. -+..+.-..+-.|.==-..+.+.++++++
T Consensus 80 ~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~l 118 (293)
T COG2962 80 LLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRL 118 (293)
T ss_pred HHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHH
Confidence 442 245554 34455555555555555556666655544
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.42 E-value=5.5 Score=32.07 Aligned_cols=100 Identities=18% Similarity=0.118 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH
Q 020906 203 YAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF 282 (320)
Q Consensus 203 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~ 282 (320)
+.+++.+..+.+++.....++-++.+ ||+.-.+.+...+...+..+....++. +..+.. +.+ |+. .+.|++|.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~---~~p-~w~-~lGG~lG~ 75 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASLS---SVP-WWA-YLGGLLGV 75 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhc---cCC-hHH-hccHHHHH
Confidence 56778888888999888888876544 699999998888888888776666553 221111 111 222 23888888
Q ss_pred HHHHHHHHHhhccchhHHHHHhHhhHH
Q 020906 283 FLNYSIFLNTTLNSAVTQTICGSFYHW 309 (320)
Q Consensus 283 ~~~~~~~~~i~~~Salt~sv~g~~K~~ 309 (320)
..-.+....+.+.++....+....-++
T Consensus 76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl 102 (138)
T PF04657_consen 76 FFVLSNIILVPRLGAALTTILIVAGQL 102 (138)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 888888888888888777766554443
No 74
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=89.30 E-value=15 Score=32.59 Aligned_cols=128 Identities=9% Similarity=-0.004 Sum_probs=80.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHH-ccc-ccccCCCCCCCCCCCCCcccHH
Q 020906 42 RRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRR-WKI-INFTMGDSLMTSDSSSTFVPLK 119 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 119 (320)
..+++.+++..++|....+++++++.+.+ .|..+--.|+-...+....... .+. .+.+ ++ ..+..-
T Consensus 113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~--~~--------g~f~G~ 180 (244)
T PF04142_consen 113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAIS--ES--------GFFHGY 180 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccc--cC--------Cchhhc
Confidence 34567788888888888889999998654 4666777776555444443332 211 1111 00 001111
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHH
Q 020906 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVG 182 (320)
Q Consensus 120 ~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~ 182 (320)
....+. +-+.....-..-..-+||.+-=.-....+...+.+.+++..+++.+++....++..
T Consensus 181 ~~~~~~-~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 181 SWWVWI-VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred chHHHH-HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 112222 22334444444556688887778888889999999999999999999988776654
No 75
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.15 E-value=1.7 Score=39.85 Aligned_cols=67 Identities=12% Similarity=0.108 Sum_probs=60.0
Q ss_pred HHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 125 LPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 125 ~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
+-.| +.+.+.-..+..|+.+.|.+..+-+-+++.+...+++..+++||.++.-.+++.+.++|..+.
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 4444 456778888999999999999999999999999999999999999999999999999998764
No 76
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=86.08 E-value=3.7 Score=38.54 Aligned_cols=135 Identities=13% Similarity=0.112 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcC--CCCchHHHHHHHHHHHHHHHH----HHHHcccccccCCCCCCCCCCCCCccc
Q 020906 44 GANAAISYMACAVLLVMFNKAALSSY--NFPCANVITLLQMISSCSFLY----FLRRWKIINFTMGDSLMTSDSSSTFVP 117 (320)
Q Consensus 44 ~~~~~~~~~~~s~~~~~~NK~ll~~~--~f~~p~~L~~~q~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (320)
.+++++.|++-.+.+ |+-.++. +.+-|.++.++..+ +.+++| ++..++.-+++ +.+ ..++
T Consensus 252 aL~sA~~YavY~vll----k~~~~~eg~rvdi~lffGfvGLf-nllllwP~l~iL~~~~~e~F~------lP~--~~q~- 317 (416)
T KOG2765|consen 252 ALLSALLYAVYTVLL----KRKIGDEGERVDIQLFFGFVGLF-NLLLLWPPLIILDFFGEERFE------LPS--STQF- 317 (416)
T ss_pred HHHHHHHHHHHHHHH----HhhcccccccccHHHHHHHHHHH-HHHHHhHHHHHHHHhccCccc------CCC--Ccee-
Confidence 356666676666555 7666654 46667766666633 444444 23334322221 100 0111
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCc
Q 020906 118 LKTLMHTLPLA-VAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDL 196 (320)
Q Consensus 118 ~~~~~~~~~~s-i~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~ 196 (320)
..++..+ +...++=+++-+|.-..+--..++.-+++++..++.+.++.++++|+..+++-+++.+|.+++...+.
T Consensus 318 ----~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 318 ----SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred ----EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 1122222 22345666788888888888889999999999999999999999999999999999999998876544
No 77
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=85.02 E-value=1.2 Score=39.79 Aligned_cols=69 Identities=10% Similarity=0.006 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
.-..-+|++..+..++-..+++---.+=..+.+.+..++..+.+.+++++.+++..|.+.+.++...+.
T Consensus 254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 345667888788888889999888777778889999999999999999999999999888777655544
No 78
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=80.76 E-value=5.7 Score=36.76 Aligned_cols=140 Identities=14% Similarity=0.087 Sum_probs=90.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh--cCCCCchHHHHHHHHHHHHHHHH-HHHH--cccccccCCCCCCCCCCCCCccc
Q 020906 43 RGANAAISYMACAVLLVMFNKAALS--SYNFPCANVITLLQMISSCSFLY-FLRR--WKIINFTMGDSLMTSDSSSTFVP 117 (320)
Q Consensus 43 ~~~~~~~~~~~~s~~~~~~NK~ll~--~~~f~~p~~L~~~q~~~~~l~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 117 (320)
.+...+.++......-.++-|.++. +++.+ +..+...+.-++.+.+. .... .+.. +. ... ....+
T Consensus 163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~-~~~-------~~~~~ 232 (316)
T KOG1441|consen 163 FGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNK-FV-GFL-------TAPWF 232 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccc-ee-eee-------ccccc
Confidence 3455566666666666777788885 34554 55666676666666555 2211 1100 00 000 00012
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcc
Q 020906 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGA 193 (320)
Q Consensus 118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~ 193 (320)
.. ...+...+++....+......+..++.=++++.-...-+++...++++++++.++...++..+.++|+++.+.
T Consensus 233 ~~-~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 233 VT-FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred hh-hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 22 2223444455555566778888888888889888888888889999999999999999999999999988654
No 79
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=76.87 E-value=24 Score=26.96 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhh
Q 020906 238 NGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCILAF-FLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIW 316 (320)
Q Consensus 238 ~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~~~~-~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~ 316 (320)
...++.+.+..+....++..+..+.... ++ +..++..|+++. ..+...+...++.++ ..+.+-.+..+...++|+
T Consensus 4 r~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 4 RYLFSVLFLLIILLIRGRLRDLFRALRR-KP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHh-Cc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence 3445666666666666665443322111 11 334555556555 334444666787775 666888888888888887
Q ss_pred hh
Q 020906 317 WA 318 (320)
Q Consensus 317 ~~ 318 (320)
+.
T Consensus 80 ~~ 81 (113)
T PF13536_consen 80 LF 81 (113)
T ss_pred HH
Confidence 64
No 80
>PRK13499 rhamnose-proton symporter; Provisional
Probab=75.36 E-value=73 Score=29.92 Aligned_cols=69 Identities=12% Similarity=-0.030 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhhhhhcCcchhHHH----HHHhhHHHHHHHHHHHHhccccC------cchhhHHHHHhhhhhhhccc
Q 020906 125 LPLAVAYLLYMVVSVESVRGVNVPMYT----TLRRTTVAFTMIMEYFLAGQKYT------PPVVGSVGLIILGAFVAGAR 194 (320)
Q Consensus 125 ~~~si~~~~~~~~~~~sl~~~svs~~~----v~ks~~p~~~~l~~~~~~~~~~s------~~~~~sl~li~~Gv~l~~~~ 194 (320)
...++.+.....+...+-+.+.+...- +..++..++..+-+. ++||+-+ +..+++++++++|..+...+
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 445556666666666665555444333 333666666666676 4888755 44467777888888776554
No 81
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=72.06 E-value=84 Score=29.42 Aligned_cols=112 Identities=8% Similarity=0.005 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHhhc--CCCCChhhHHHHHHHHHHHHHHHHHHHhCCh--hhhh-cCC--CCcchHHHHHHHHHHH
Q 020906 207 FLANITTAIYLATIARIGK--SSGLNSFGLMWCNGVICGPLLLLWTFLRGDL--ETTI-NFP--YLLSPGFLVVLCFSCI 279 (320)
Q Consensus 207 l~s~~~~a~~~v~~~~~~~--~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~--~~~~-~~~--~~~~~~~~~~l~~s~~ 279 (320)
++..+-.+.+....+...+ +.++.|....+.+=.+=.++.....+.+... +... +.. .+.++...+-+.+-++
T Consensus 21 ~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~ 100 (345)
T KOG2234|consen 21 IVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPAL 100 (345)
T ss_pred HHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHH
Confidence 3333444444444443333 2346677777666666555555544433111 1111 111 1123323345556666
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHhHhhHHHHHhhhhhh
Q 020906 280 LAFFLNYSIFLNTTLNSAVTQTICGSFYHWTRLDTIWWA 318 (320)
Q Consensus 280 ~~~~~~~~~~~~i~~~Salt~sv~g~~K~~~~i~~S~~~ 318 (320)
+...-|.-.|......+|.|++|..++|-..+-+++++.
T Consensus 101 iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~ 139 (345)
T KOG2234|consen 101 IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI 139 (345)
T ss_pred HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH
Confidence 777778777999999999999999999999998887653
No 82
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=71.74 E-value=70 Score=28.07 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHH---HHHHHhccccCcchhhHHHHHhhhh
Q 020906 120 TLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMI---MEYFLAGQKYTPPVVGSVGLIILGA 188 (320)
Q Consensus 120 ~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l---~~~~~~~~~~s~~~~~sl~li~~Gv 188 (320)
.+.-..|+-+++......-.......+++..++-+.+..+|... .+.++.+.+.+....++-..+..|.
T Consensus 101 ~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 101 FLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred hhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 34556888888887777777777888888888888776666543 3333444444555555555555444
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=67.14 E-value=64 Score=25.86 Aligned_cols=122 Identities=12% Similarity=0.158 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccc-cccCCCCCCCCCCCCCcccHHHHHHHHHHHHHH
Q 020906 53 ACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKII-NFTMGDSLMTSDSSSTFVPLKTLMHTLPLAVAY 131 (320)
Q Consensus 53 ~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~si~~ 131 (320)
........+|-.+-+..+ .|..=+++-+..+.+.+.++....+. +.+. .++.|| . ...-+++-
T Consensus 11 ~~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~----------~~~~p~---w-~~lGG~lG 74 (138)
T PF04657_consen 11 ALIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLAS----------LSSVPW---W-AYLGGLLG 74 (138)
T ss_pred HHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccch----------hccCCh---H-HhccHHHH
Confidence 333344556666665443 46666666777777666554443221 1110 111342 2 23356666
Q ss_pred HHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHH----HhccccCcchhhHHHHHhhhhhh
Q 020906 132 LLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYF----LAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 132 ~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~----~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
...+.+.+.+...+.++..+.+. .-..+.-+++|.+ .-++++++.+.+++.++++|+.+
T Consensus 75 ~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 75 VFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77777888899998888776655 4566667777875 35778999999999999999864
No 84
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.79 E-value=46 Score=30.67 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=13.0
Q ss_pred cCcccchHHHHHHHHHHHHHHHHHHHH
Q 020906 194 RDLSFDFFGYAVVFLANITTAIYLATI 220 (320)
Q Consensus 194 ~d~~~~~~G~~~~l~s~~~~a~~~v~~ 220 (320)
+|..+++.|++-.+++.+....|....
T Consensus 276 ~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 276 GDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred CCceechhhhHHHHHHhhhhhHHhhhh
Confidence 444455444444444444444554443
No 85
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=58.49 E-value=66 Score=30.06 Aligned_cols=105 Identities=16% Similarity=0.245 Sum_probs=67.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHH-hhHHHHHHHHHHHHhc-------cccCcchhhHHHHHhhhh
Q 020906 117 PLKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLR-RTTVAFTMIMEYFLAG-------QKYTPPVVGSVGLIILGA 188 (320)
Q Consensus 117 ~~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~k-s~~p~~~~l~~~~~~~-------~~~s~~~~~sl~li~~Gv 188 (320)
|.+.+......+++..+.-...-.+.+|+-+|.-+-+- -++..+=.++-.++.+ ++-.....+++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 44556666778888887777888889998777554322 2222222222222222 233456778999999999
Q ss_pred hhhccc----C-------cccc-hHHHHHHHHHHHHHHHHHHHHH
Q 020906 189 FVAGAR----D-------LSFD-FFGYAVVFLANITTAIYLATIA 221 (320)
Q Consensus 189 ~l~~~~----d-------~~~~-~~G~~~~l~s~~~~a~~~v~~~ 221 (320)
++.+.. | .++| ..|...++++.+++|.++.-.+
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 886431 1 1334 3799999999999999886443
No 86
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=56.17 E-value=28 Score=30.55 Aligned_cols=65 Identities=12% Similarity=-0.002 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHH
Q 020906 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGL 183 (320)
Q Consensus 119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~l 183 (320)
+.+..++.-|++-....+++-++++-++-..+.+.-++.-....+.+.+++++..+...+.++++
T Consensus 222 d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sill 286 (309)
T COG5070 222 DSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILL 286 (309)
T ss_pred HHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHH
Confidence 44455566666666677778888888888888888887777777777777777776666655543
No 87
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=55.62 E-value=3.9 Score=36.85 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=0.0
Q ss_pred chhHHHHHHhhHHHHHHHHHHH-Hhccc-cCcchhhHHHHHhhhhhhhcccCc--ccchHHHHHHHHHHHHHHHHHHHHH
Q 020906 146 NVPMYTTLRRTTVAFTMIMEYF-LAGQK-YTPPVVGSVGLIILGAFVAGARDL--SFDFFGYAVVFLANITTAIYLATIA 221 (320)
Q Consensus 146 svs~~~v~ks~~p~~~~l~~~~-~~~~~-~s~~~~~sl~li~~Gv~l~~~~d~--~~~~~G~~~~l~s~~~~a~~~v~~~ 221 (320)
+-+..+++.+...+.++++-.+ ++||| .-+.-.++++++++-..+...-.. +.-+.|+++.++..++.-.-+.|..
T Consensus 48 t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym~ 127 (381)
T PF05297_consen 48 TQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYMW 127 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555554444433 34444 567777777777776666543322 2235788777776666555555643
Q ss_pred HhhcCCCCChhhHHHHHHHHHH
Q 020906 222 RIGKSSGLNSFGLMWCNGVICG 243 (320)
Q Consensus 222 ~~~~~~~~~~~~l~~~~~~~~~ 243 (320)
++++++-+-|+++.+...+++
T Consensus 128 -lLr~~GAs~WtiLaFcLAF~L 148 (381)
T PF05297_consen 128 -LLRELGASFWTILAFCLAFLL 148 (381)
T ss_dssp ----------------------
T ss_pred -HHHHhhhHHHHHHHHHHHHHH
Confidence 678888888888776554443
No 88
>PF10642 Tom5: Mitochondrial import receptor subunit or translocase; InterPro: IPR019603 This entry represents a short family of yeast proteins. Tom5 is one of three very small translocases of the mitochondrial outer membrane. Tom5 links mitochondrial preprotein receptors to the general import pore []. Although Tom5 has allegedly been identified in vertebrates this could not be confirmed.
Probab=53.95 E-value=17 Score=23.65 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=21.3
Q ss_pred CCCCCCchhhhhhccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 020906 15 EPARGDEGEKERLLKGDEKLFRGSAMTRRGANAAISYMACAVLLVMFNKA 64 (320)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~NK~ 64 (320)
++|..+|.|+.......++. +++....++++| .+-...-+++|.
T Consensus 5 ~~~qpS~eE~k~~e~~A~~T-----vk~a~~~a~~Ly-lsP~~~~~vkk~ 48 (49)
T PF10642_consen 5 PPPQPSEEEIKAAEAQANFT-----VKNAAAAAALLY-LSPFAIDFVKKQ 48 (49)
T ss_pred CCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHH-HhHHHHHHHHhc
Confidence 34455555554443322221 233345556666 556666666654
No 89
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=53.86 E-value=2e+02 Score=27.23 Aligned_cols=17 Identities=0% Similarity=-0.060 Sum_probs=8.8
Q ss_pred HHHHHhhcCCCCchHHHH
Q 020906 61 FNKAALSSYNFPCANVIT 78 (320)
Q Consensus 61 ~NK~ll~~~~f~~p~~L~ 78 (320)
+++++-. .++..|.+..
T Consensus 236 i~~~l~~-~~~~lP~f~~ 252 (368)
T PF03616_consen 236 ISALLKK-IGLTLPLFVG 252 (368)
T ss_pred HHHHHHH-cCcCCchHHH
Confidence 4445443 4566676543
No 90
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=49.74 E-value=7.8 Score=34.40 Aligned_cols=115 Identities=10% Similarity=0.156 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHH-HhhHHHHHHHHHHHHhccccCcchh----hHHHHHhhhhhhhcccC
Q 020906 121 LMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTL-RRTTVAFTMIMEYFLAGQKYTPPVV----GSVGLIILGAFVAGARD 195 (320)
Q Consensus 121 ~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~-ks~~p~~~~l~~~~~~~~~~s~~~~----~sl~li~~Gv~l~~~~d 195 (320)
+-.-+.-++++.........|.+++.+|-+.-+ .....+-+.+++.+.++|..+..+. .++++++.|+.+.++.|
T Consensus 59 ~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 59 FIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred HHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence 333456667778888888999999877755433 3456677888999999998877654 57888999999988876
Q ss_pred cc--------cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHH
Q 020906 196 LS--------FDFFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNG 239 (320)
Q Consensus 196 ~~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~ 239 (320)
.+ .--.|+...+.|.+.+..|.+..|.. +.+.++...-++
T Consensus 139 ~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqA 186 (288)
T COG4975 139 RNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQA 186 (288)
T ss_pred cccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHH
Confidence 31 11469999999999999999887543 355555554433
No 91
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=49.09 E-value=25 Score=31.13 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906 156 TTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 156 ~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
+--.||.+.+.++++...+.++|++..++..|...
T Consensus 276 TRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 276 TRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred hHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 34468889999999999999999999888887654
No 92
>PF05817 Ribophorin_II: Oligosaccharyltransferase subunit Ribophorin II; InterPro: IPR008814 This family consists of several eukaryotic Ribophorin II (RPN2) proteins. The mammalian oligosaccharyltransferase (OST) is a protein complex that effects the cotranslational N-glycosylation of newly synthesised polypeptides, and is composed of at least four rough ER-specific membrane proteins: ribophorins I and II (RI and RII), OST48, and Dadl. The mechanism(s) by which the subunits of this complex are retained in the ER are not well understood [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane, 0008250 oligosaccharyltransferase complex
Probab=48.44 E-value=1.5e+02 Score=30.47 Aligned_cols=28 Identities=21% Similarity=0.251 Sum_probs=12.7
Q ss_pred cccCCCCCCchhhhhhcccc-ccccccch
Q 020906 12 PVSEPARGDEGEKERLLKGD-EKLFRGSA 39 (320)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 39 (320)
|..++|...|.+..-+++++ .|.||.+|
T Consensus 514 ~~~~~~~~~~~~~ry~~kpEI~H~Fr~~e 542 (636)
T PF05817_consen 514 PEDAPPPKYEKPVRYGPKPEIHHIFREPE 542 (636)
T ss_pred CCcCCCCCccccccCCCCCceeeecCCCC
Confidence 33334434433322233333 66777765
No 93
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=48.24 E-value=92 Score=25.59 Aligned_cols=59 Identities=17% Similarity=-0.040 Sum_probs=43.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHHHHHHHcccc
Q 020906 40 MTRRGANAAISYMACAVLLVMFNKAALSSYNFPCANVITLLQMISSCSFLYFLRRWKII 98 (320)
Q Consensus 40 ~~~~~~~~~~~~~~~s~~~~~~NK~ll~~~~f~~p~~L~~~q~~~~~l~~~~~~~~~~~ 98 (320)
|.+|+++.+.+=.+..++.....=++..+..++.|..+++.-.+.++....+-...|.+
T Consensus 61 M~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYGil 119 (153)
T PF11947_consen 61 MLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYGIL 119 (153)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhhhc
Confidence 67888888888888888888888888887667778777776666666555544444443
No 94
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=47.13 E-value=41 Score=25.78 Aligned_cols=69 Identities=14% Similarity=0.170 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCcchhHHH-HHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhhh
Q 020906 122 MHTLPLAVAYLLYMVVSVESVRGVNVPMYT-TLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVA 191 (320)
Q Consensus 122 ~~~~~~si~~~~~~~~~~~sl~~~svs~~~-v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~ 191 (320)
+.++|..+=.+ ...+...-|+..+.+... +..+++-.|+.+.+..+.-|....+..++..+++.|+.++
T Consensus 54 ~Y~iPFllNqc-gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 54 EYLIPFLLNQC-GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHh-hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 34455443333 333455666777666554 3446788899999988766677888889999999998764
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=38.98 E-value=3.2e+02 Score=25.27 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhhHHHHHhhhhhh
Q 020906 119 KTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFV 190 (320)
Q Consensus 119 ~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l 190 (320)
+.++.++..+.+.+....+=..-++.--.=+.+++..+==++..+++.+.++.+.++.+|.++.++..|..+
T Consensus 239 ~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 239 DVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 567778888887776666544445443333334444455567778888999999999999999888877755
No 96
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=30.53 E-value=2.1e+02 Score=20.73 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHHHHH-HHHHHHHhh--cCCCCchHHHHHHHHHHHHHH
Q 020906 42 RRGANAAISYMACAVLL-VMFNKAALS--SYNFPCANVITLLQMISSCSF 88 (320)
Q Consensus 42 ~~~~~~~~~~~~~s~~~-~~~NK~ll~--~~~f~~p~~L~~~q~~~~~l~ 88 (320)
+.+.....+|.++|.+. +++-..+.+ -.|||.+..+..-..+..+++
T Consensus 12 rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fvi 61 (81)
T PF13937_consen 12 RLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVI 61 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHH
Confidence 34556677799999988 666666532 247877766655554444443
No 97
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=29.15 E-value=3.2e+02 Score=24.97 Aligned_cols=40 Identities=23% Similarity=0.345 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhccccCcchhhHHHHHhhhhhhhcccCcc
Q 020906 158 VAFTMIMEYFLAGQKYTPPVVGSVGLIILGAFVAGARDLS 197 (320)
Q Consensus 158 p~~~~l~~~~~~~~~~s~~~~~sl~li~~Gv~l~~~~d~~ 197 (320)
-..|.+++++++.+.++.+-..+..+++.|+.+-.+.+.+
T Consensus 297 KavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 297 KAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred hHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 3457789999999999999999999999999997766643
No 98
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.78 E-value=3.3e+02 Score=22.31 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhCChhhhhcCCCCcchHHHHHHHHHHH
Q 020906 200 FFGYAVVFLANITTAIYLATIARIGKSSGLNSFGLMWCNGVICGPLLLLWTFLRGDLETTINFPYLLSPGFLVVLCFSCI 279 (320)
Q Consensus 200 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ge~~~~~~~~~~~~~~~~~~l~~s~~ 279 (320)
+......+++..+..++.-...|+.+..+ +|.--.+.+...+...+..+........+ ...- ...| |+.. +.|+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~-~~~p--wW~~-~GG~ 77 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPG-LAAV-ASAP--WWAW-IGGL 77 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhc-cCCc--hHHH-Hccc
Confidence 35567788888888888888888876544 67777777777777666665544222221 1110 1111 3333 3457
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHhHhhH
Q 020906 280 LAFFLNYSIFLNTTLNSAVTQTICGSFYH 308 (320)
Q Consensus 280 ~~~~~~~~~~~~i~~~Salt~sv~g~~K~ 308 (320)
+|.++-.++-....+..+.++......-+
T Consensus 78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQ 106 (150)
T COG3238 78 LGAIFVTSSILLAPRLGAATTIALVIAGQ 106 (150)
T ss_pred hhhhhhhhhHHhccchhHHHHHHHHHHHH
Confidence 78777777777777777777766554443
No 99
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=27.84 E-value=37 Score=30.29 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcCcchhHHHHHHhhHHHHHHHHHHHHhccccCcchhh----HHHHHhhhhhh
Q 020906 118 LKTLMHTLPLAVAYLLYMVVSVESVRGVNVPMYTTLRRTTVAFTMIMEYFLAGQKYTPPVVG----SVGLIILGAFV 190 (320)
Q Consensus 118 ~~~~~~~~~~si~~~~~~~~~~~sl~~~svs~~~v~ks~~p~~~~l~~~~~~~~~~s~~~~~----sl~li~~Gv~l 190 (320)
++.+++ ...++.+.....+-..|-+.+-+++.--+..+..+...+.+.+++|||-+++++. ++++++.|..+
T Consensus 207 K~t~~n-ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 207 KYTWLN-IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHH-HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 344454 4557777766666666666666666555666777777888999999998888764 44445555444
No 100
>KOG2447 consensus Oligosaccharyltransferase, delta subunit (ribophorin II) [Posttranslational modification, protein turnover, chaperones]
Probab=25.07 E-value=5.2e+02 Score=23.43 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=18.8
Q ss_pred HHHHHHHhhcCCCCchH-HHHHHHHHHHHHHHHHHHH
Q 020906 59 VMFNKAALSSYNFPCAN-VITLLQMISSCSFLYFLRR 94 (320)
Q Consensus 59 ~~~NK~ll~~~~f~~p~-~L~~~q~~~~~l~~~~~~~ 94 (320)
++-.|...+..++|... .-+.+|...+.+....+..
T Consensus 216 v~W~klg~Nv~n~pss~~s~~~Fh~gi~g~~vL~f~y 252 (287)
T KOG2447|consen 216 VLWLKLGANVSNFPSSPTSTLGFHAGIAGILVLFFVY 252 (287)
T ss_pred HHHHHhhhhhccCCCCCchhhhhhhHHHHHHHHHHHH
Confidence 33445554456676433 5566666655554444433
No 101
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=21.57 E-value=3.1e+02 Score=23.85 Aligned_cols=7 Identities=14% Similarity=0.216 Sum_probs=2.8
Q ss_pred CCCCccc
Q 020906 7 KSPMLPV 13 (320)
Q Consensus 7 ~~~~~~~ 13 (320)
.+++.|.
T Consensus 88 ~~l~tp~ 94 (227)
T PF05399_consen 88 QELYTPS 94 (227)
T ss_pred CCcCCCC
Confidence 3344343
Done!