Query 020908
Match_columns 320
No_of_seqs 179 out of 410
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 09:57:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020908.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020908hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kt1a1 a.118.8.1 (A:254-421) 45.9 21 0.0015 27.0 6.3 78 238-318 58-141 (168)
2 d1p5qa1 a.118.8.1 (A:258-427) 45.1 19 0.0014 27.4 6.0 76 240-318 58-139 (170)
3 d2fbna1 a.118.8.1 (A:22-174) P 44.2 22 0.0016 26.5 6.1 76 240-318 63-144 (153)
4 d2f4ma1 d.3.1.4 (A:164-450) Pe 38.7 10 0.00075 33.1 3.6 34 168-201 127-160 (287)
5 d1ihga1 a.118.8.1 (A:197-365) 38.0 27 0.002 26.1 5.8 74 242-318 75-154 (169)
6 d1elwa_ a.118.8.1 (A:) Hop {Hu 29.6 29 0.0021 24.4 4.4 71 245-318 38-114 (117)
7 d1ppjb2 d.185.1.1 (B:236-439) 21.5 1.1E+02 0.0083 23.4 7.1 22 50-71 114-135 (204)
8 d1elra_ a.118.8.1 (A:) Hop {Hu 14.9 30 0.0022 24.8 1.6 61 248-311 8-74 (128)
9 d1hywa_ d.186.1.1 (A:) Head-to 11.2 53 0.0039 21.7 1.7 31 286-316 5-48 (58)
10 d1dxla2 c.3.1.5 (A:153-275) Di 10.5 1E+02 0.0074 22.0 3.5 34 22-55 50-83 (123)
No 1
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=45.87 E-value=21 Score=26.97 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHHHhcccCCCchhhhHhhhhhHHhhhhccC------CchhhHhhhhHHHHHHHHHhhhhccCCcchh
Q 020908 238 TVQMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN------SGDSGLQLASAKAARHRLERGVWNSVRFGDM 311 (320)
Q Consensus 238 s~r~IL~RmL~NLk~~y~~~~~~~s~~l~L~~~~~a~~~dr~~------~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~ 311 (320)
....+...+..|+-.+|...++ ..-++...+-++.+|..+ -+..+.++.....|...+++++-..|+-...
T Consensus 58 ~~~~~~~~~~~Nla~~~~~l~~---~~~Ai~~~~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~ 134 (168)
T d1kt1a1 58 ASESFLLAAFLNLAMCYLKLRE---YTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAA 134 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHH
T ss_pred hcchhHHHHHHhHHHHHHHhhh---cccchhhhhhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 3455677888999999988877 444555555454444443 2337788888899999999999999998877
Q ss_pred Hhhhhcc
Q 020908 312 RCALAGM 318 (320)
Q Consensus 312 ~~~~~~~ 318 (320)
...|..|
T Consensus 135 ~~~l~~~ 141 (168)
T d1kt1a1 135 RLQIFMC 141 (168)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666544
No 2
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.06 E-value=19 Score=27.37 Aligned_cols=76 Identities=16% Similarity=0.040 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHhcccCCCch------hhhHhhhhhHHhhhhccCCchhhHhhhhHHHHHHHHHhhhhccCCcchhHh
Q 020908 240 QMLLEEILRNLKNAFWPFQHDRS------RSLFLRAARAANCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDMRC 313 (320)
Q Consensus 240 r~IL~RmL~NLk~~y~~~~~~~s------~~l~L~~~~~a~~~dr~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~~~ 313 (320)
..+...+..|+-.+|...++... ..+-+.|.+......++ ..+.++.-..-|...++.++-..|+-.++++
T Consensus 58 ~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~~~~a~~~~g---~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~ 134 (170)
T d1p5qa1 58 QALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRG---EAHLAVNDFELARADFQKVLQLYPNNKAAKT 134 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH---HHHHHTTCHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred chhHHHHHHHHHHHHHhhhhcccccchhhhhhhccccchhhhHHHH---HHHHHhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 44556778899999998887332 23333444444444444 4888999999999999999999999999988
Q ss_pred hhhcc
Q 020908 314 ALAGM 318 (320)
Q Consensus 314 ~~~~~ 318 (320)
.|+.|
T Consensus 135 ~l~~~ 139 (170)
T d1p5qa1 135 QLAVC 139 (170)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 3
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=44.20 E-value=22 Score=26.54 Aligned_cols=76 Identities=14% Similarity=0.035 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHhcccCCCchhhhHhhhhhHHhhhhccC------CchhhHhhhhHHHHHHHHHhhhhccCCcchhHh
Q 020908 240 QMLLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN------SGDSGLQLASAKAARHRLERGVWNSVRFGDMRC 313 (320)
Q Consensus 240 r~IL~RmL~NLk~~y~~~~~~~s~~l~L~~~~~a~~~dr~~------~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~~~ 313 (320)
..+...+..|+-.+|...++ ..-++...+-++.+|..+ -|.++..+.-...|...+++++-..|+-.+++.
T Consensus 63 ~~~~~~~~~Nla~~~~~l~~---~~~Al~~~~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~ 139 (153)
T d2fbna1 63 KNIEISCNLNLATCYNKNKD---YPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRN 139 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred hhHHHHHHhhHHHHHHHhcc---cchhhhhhhccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 34556678899999998888 444555555555555444 233777788888999999999999999888877
Q ss_pred hhhcc
Q 020908 314 ALAGM 318 (320)
Q Consensus 314 ~~~~~ 318 (320)
-+.-|
T Consensus 140 ~l~~~ 144 (153)
T d2fbna1 140 SYELC 144 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 4
>d2f4ma1 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.70 E-value=10 Score=33.15 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=31.6
Q ss_pred CccccHHHHHhcCcCchHHHHHHHHHHHHHcCCC
Q 020908 168 PRSLYLHSVLTHRTGSAVMLSLIYSEILKMLRIW 201 (320)
Q Consensus 168 p~Ns~L~~VLerR~GiPIsLsIIYleVArRLGlp 201 (320)
|+.+...++|++|+|.+-=-|.++..++|.+|+|
T Consensus 127 pRy~~p~~ll~tr~G~C~e~a~~~~~~~Ra~g~~ 160 (287)
T d2f4ma1 127 PRYNNPEKLLETRCGRCGEWANCFTLCCRALGFE 160 (287)
T ss_dssp ECCCCHHHHHHHCEESHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHhcCccHHHHHHHHHHHHHHcCCC
Confidence 5666788999999999999999999999999999
No 5
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=38.00 E-value=27 Score=26.10 Aligned_cols=74 Identities=12% Similarity=-0.013 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhcccCCCchhhhHhhhhhHHhhhhccC------CchhhHhhhhHHHHHHHHHhhhhccCCcchhHhhh
Q 020908 242 LLEEILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN------SGDSGLQLASAKAARHRLERGVWNSVRFGDMRCAL 315 (320)
Q Consensus 242 IL~RmL~NLk~~y~~~~~~~s~~l~L~~~~~a~~~dr~~------~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~~~~~ 315 (320)
.....+.|+-.+|...++ ..-++...+-++.+|..+ -|..+.+++-...|...+++++-..|+..+....|
T Consensus 75 ~~~~~~~nla~~~~~~~~---~~~Ai~~~~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l 151 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSD---WQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 151 (169)
T ss_dssp HHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcc---cchhhhhhhhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 456677888888888777 334444444443333333 23488888999999999999999999999888877
Q ss_pred hcc
Q 020908 316 AGM 318 (320)
Q Consensus 316 ~~~ 318 (320)
.-|
T Consensus 152 ~~~ 154 (169)
T d1ihga1 152 LKV 154 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 6
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.57 E-value=29 Score=24.42 Aligned_cols=71 Identities=11% Similarity=0.012 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcccCCCchhhhHhhhhhHHhhhhccC------CchhhHhhhhHHHHHHHHHhhhhccCCcchhHhhhhcc
Q 020908 245 EILRNLKNAFWPFQHDRSRSLFLRAARAANCIDQLN------SGDSGLQLASAKAARHRLERGVWNSVRFGDMRCALAGM 318 (320)
Q Consensus 245 RmL~NLk~~y~~~~~~~s~~l~L~~~~~a~~~dr~~------~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~~~~~~~~ 318 (320)
....|+-.+|...++ ...++...+.+..++..+ -|..+..+.-.+.|...+++++-..|+-.++.+.++-|
T Consensus 38 ~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l 114 (117)
T d1elwa_ 38 VLYSNRSAAYAKKGD---YQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 114 (117)
T ss_dssp HHHHHHHHHHHHHTC---HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hhhhccccccccccc---ccccchhhhhHHHhccchhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 356666777777666 445555555555555444 23367777888999999999999999999988887654
No 7
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.49 E-value=1.1e+02 Score=23.41 Aligned_cols=22 Identities=5% Similarity=-0.097 Sum_probs=17.7
Q ss_pred hcccccHHHHHHHHHHHHHHhh
Q 020908 50 SIGTDTTFAREAREGFYSQIKR 71 (320)
Q Consensus 50 ~~~~~~~~~~~ar~~f~~~l~~ 71 (320)
..||+.....+++..+...+-.
T Consensus 114 ~~~it~~eL~~aK~~l~~~~~~ 135 (204)
T d1ppjb2 114 QGNLSNPDVQAAKNKLKAGYLM 135 (204)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHhHHh
Confidence 5689999999999888777653
No 8
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.88 E-value=30 Score=24.80 Aligned_cols=61 Identities=10% Similarity=0.029 Sum_probs=36.7
Q ss_pred HHHHHHhcccCCCch------hhhHhhhhhHHhhhhccCCchhhHhhhhHHHHHHHHHhhhhccCCcchh
Q 020908 248 RNLKNAFWPFQHDRS------RSLFLRAARAANCIDQLNSGDSGLQLASAKAARHRLERGVWNSVRFGDM 311 (320)
Q Consensus 248 ~NLk~~y~~~~~~~s------~~l~L~~~~~a~~~dr~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~g~~ 311 (320)
.|+=..|...++.+. ..+-+.+.++.....++. .+.++.....|...+++.|.+.|+..+.
T Consensus 8 k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~---~~~~~~~~~~A~~~~~~al~l~~~~~~~ 74 (128)
T d1elra_ 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAA---VYFEKGDYNKCRELCEKAIEVGRENRED 74 (128)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH---HHHHHTCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHH---HHHHcCchHHHHHHHHHHHHhCcccHHH
Confidence 344455555555332 233334444555555555 7777888888888888888877766543
No 9
>d1hywa_ d.186.1.1 (A:) Head-to-tail joining protein W, gpW {Bacteriophage lambda [TaxId: 10710]}
Probab=11.16 E-value=53 Score=21.75 Aligned_cols=31 Identities=32% Similarity=0.455 Sum_probs=23.3
Q ss_pred HhhhhHHHHHHHHHhh-------------hhccCCcchhHhhhh
Q 020908 286 LQLASAKAARHRLERG-------------VWNSVRFGDMRCALA 316 (320)
Q Consensus 286 ~~~~~~~~a~~~l~~~-------------~~~~~~~g~~~~~~~ 316 (320)
..|..||+|.|+|.-| =||....+++|+...
T Consensus 5 ~~L~~aR~A~h~L~tGk~VvsvqKDGr~Veytaasi~eL~~yI~ 48 (58)
T d1hywa_ 5 EELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLKKYIA 48 (58)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECSSCEEEECTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCceeEEEecCCcEEEEeccCHHHHHHHHH
Confidence 4688999999999865 266667777777654
No 10
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=10.54 E-value=1e+02 Score=22.03 Aligned_cols=34 Identities=9% Similarity=0.138 Sum_probs=26.2
Q ss_pred ceeEEeecCCCCcccchhhHHHHHHhhhhccccc
Q 020908 22 RYRVTCCSGSQQKYVASDLKLALHDVLDSIGTDT 55 (320)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 55 (320)
+..|+.++...-+...+|+..+|+..|...||+.
T Consensus 50 ~Vtvi~~~~~~l~~~d~~~~~~l~~~l~~~GI~i 83 (123)
T d1dxla2 50 EVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKF 83 (123)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCE
T ss_pred eEEEEEEccccCchhhhcchhhhhhhhhcccceE
Confidence 3466666666446778899999999999999864
Done!