Query 020909
Match_columns 320
No_of_seqs 181 out of 1180
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 06:06:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1.7E-76 3.8E-81 553.9 25.5 301 1-313 151-453 (454)
2 PLN02213 sinapoylglucose-malat 100.0 1.1E-69 2.4E-74 497.9 27.6 283 1-310 34-319 (319)
3 PLN03016 sinapoylglucose-malat 100.0 2.6E-66 5.7E-71 490.0 26.7 283 1-310 148-433 (433)
4 PLN02209 serine carboxypeptida 100.0 2E-65 4.3E-70 484.1 26.5 285 1-310 150-437 (437)
5 PF00450 Peptidase_S10: Serine 100.0 1.6E-65 3.5E-70 488.0 16.7 288 1-307 119-415 (415)
6 PTZ00472 serine carboxypeptida 100.0 4E-63 8.7E-68 473.6 22.6 285 1-311 154-462 (462)
7 KOG1283 Serine carboxypeptidas 100.0 2E-43 4.4E-48 307.9 10.0 298 2-306 106-412 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 5.1E-37 1.1E-41 285.2 12.2 284 2-309 180-492 (498)
9 TIGR03343 biphenyl_bphD 2-hydr 97.0 0.0025 5.3E-08 57.0 7.6 60 218-306 222-281 (282)
10 PRK03204 haloalkane dehalogena 96.7 0.0025 5.4E-08 57.7 5.2 59 219-305 227-285 (286)
11 PLN02679 hydrolase, alpha/beta 96.7 0.0059 1.3E-07 57.2 7.6 65 219-308 292-357 (360)
12 TIGR01738 bioH putative pimelo 96.7 0.0046 1E-07 53.0 6.5 60 217-305 186-245 (245)
13 TIGR02427 protocat_pcaD 3-oxoa 96.6 0.0067 1.5E-07 52.2 7.1 60 218-306 192-251 (251)
14 TIGR03056 bchO_mg_che_rel puta 96.5 0.0056 1.2E-07 54.2 6.1 59 219-306 220-278 (278)
15 TIGR03611 RutD pyrimidine util 96.5 0.0077 1.7E-07 52.3 6.6 59 219-306 198-256 (257)
16 PRK10349 carboxylesterase BioH 96.4 0.0076 1.6E-07 53.2 6.4 61 217-306 194-254 (256)
17 PRK10673 acyl-CoA esterase; Pr 96.4 0.0078 1.7E-07 52.8 6.1 60 219-307 195-254 (255)
18 PRK00870 haloalkane dehalogena 96.3 0.0098 2.1E-07 54.0 6.7 69 213-308 233-301 (302)
19 KOG4178 Soluble epoxide hydrol 96.2 0.0076 1.6E-07 54.7 5.0 62 217-306 256-318 (322)
20 PRK07581 hypothetical protein; 96.2 0.013 2.8E-07 54.3 6.7 60 218-306 274-334 (339)
21 PRK03592 haloalkane dehalogena 96.2 0.0082 1.8E-07 54.3 5.2 64 219-310 228-291 (295)
22 PLN03084 alpha/beta hydrolase 96.1 0.01 2.3E-07 56.1 5.6 58 219-306 325-382 (383)
23 TIGR01250 pro_imino_pep_2 prol 96.0 0.021 4.6E-07 50.3 6.8 63 214-306 226-288 (288)
24 TIGR01392 homoserO_Ac_trn homo 95.9 0.026 5.6E-07 52.6 7.6 63 219-306 288-351 (351)
25 PHA02857 monoglyceride lipase; 95.8 0.022 4.7E-07 50.8 6.4 63 218-308 208-273 (276)
26 TIGR02240 PHA_depoly_arom poly 95.8 0.019 4.1E-07 51.4 6.0 66 219-314 207-272 (276)
27 PLN02824 hydrolase, alpha/beta 95.8 0.017 3.7E-07 52.1 5.6 60 219-307 234-293 (294)
28 PRK08775 homoserine O-acetyltr 95.6 0.013 2.9E-07 54.4 4.3 61 219-307 277-338 (343)
29 PLN02965 Probable pheophorbida 95.6 0.024 5.2E-07 50.1 5.6 60 218-306 192-251 (255)
30 KOG1454 Predicted hydrolase/ac 95.4 0.029 6.4E-07 51.9 5.7 60 219-307 264-323 (326)
31 PRK00175 metX homoserine O-ace 95.3 0.049 1.1E-06 51.4 6.9 65 219-308 309-374 (379)
32 PLN02578 hydrolase 95.2 0.052 1.1E-06 50.7 6.8 59 219-307 296-354 (354)
33 PLN03087 BODYGUARD 1 domain co 95.1 0.059 1.3E-06 52.5 7.0 67 212-307 410-478 (481)
34 PLN02385 hydrolase; alpha/beta 95.0 0.041 8.8E-07 51.2 5.4 63 219-308 279-345 (349)
35 PRK06765 homoserine O-acetyltr 94.9 0.1 2.2E-06 49.5 7.9 65 218-307 322-387 (389)
36 PF08386 Abhydrolase_4: TAP-li 94.9 0.1 2.3E-06 39.5 6.4 65 219-312 34-98 (103)
37 PRK10749 lysophospholipase L2; 94.6 0.098 2.1E-06 48.3 6.9 68 219-308 259-329 (330)
38 PF12697 Abhydrolase_6: Alpha/ 94.5 0.064 1.4E-06 45.0 4.9 54 217-299 174-227 (228)
39 PLN02298 hydrolase, alpha/beta 94.5 0.11 2.4E-06 47.8 6.8 63 219-308 251-317 (330)
40 PLN02894 hydrolase, alpha/beta 94.3 0.08 1.7E-06 50.4 5.6 59 219-306 325-383 (402)
41 PRK14875 acetoin dehydrogenase 94.3 0.1 2.2E-06 48.5 6.2 59 217-307 312-370 (371)
42 PRK11126 2-succinyl-6-hydroxy- 93.8 0.15 3.4E-06 44.1 6.1 30 277-306 211-240 (242)
43 PRK06489 hypothetical protein; 93.7 0.2 4.3E-06 46.9 6.9 60 219-307 292-356 (360)
44 TIGR03695 menH_SHCHC 2-succiny 93.3 0.17 3.7E-06 43.1 5.4 59 218-306 193-251 (251)
45 PF00326 Peptidase_S9: Prolyl 92.7 0.27 5.9E-06 42.0 5.8 49 218-291 143-191 (213)
46 PLN02652 hydrolase; alpha/beta 92.5 0.21 4.6E-06 47.5 5.2 63 219-308 324-387 (395)
47 TIGR01607 PST-A Plasmodium sub 92.2 0.37 8E-06 44.6 6.3 62 219-307 270-332 (332)
48 PRK11460 putative hydrolase; P 91.8 0.44 9.5E-06 41.7 6.1 63 218-305 147-209 (232)
49 PF03583 LIP: Secretory lipase 91.3 0.96 2.1E-05 41.1 7.9 68 219-312 219-289 (290)
50 PLN02511 hydrolase 91.2 0.23 4.9E-06 47.1 3.9 72 218-318 297-375 (388)
51 PF00561 Abhydrolase_1: alpha/ 90.8 0.41 8.9E-06 40.6 4.8 56 218-302 174-229 (230)
52 PRK10566 esterase; Provisional 90.7 0.53 1.2E-05 41.1 5.6 62 219-307 186-247 (249)
53 KOG4409 Predicted hydrolase/ac 89.3 1.1 2.4E-05 41.4 6.4 71 207-306 292-362 (365)
54 PLN02980 2-oxoglutarate decarb 89.1 0.91 2E-05 51.1 6.9 75 217-309 1566-1640(1655)
55 PF07519 Tannase: Tannase and 88.2 2.3 4.9E-05 41.5 8.2 89 208-313 342-432 (474)
56 PRK05855 short chain dehydroge 87.9 0.51 1.1E-05 46.7 3.6 59 219-307 233-291 (582)
57 PF02230 Abhydrolase_2: Phosph 87.6 1.1 2.4E-05 38.5 5.2 59 219-306 155-213 (216)
58 TIGR03100 hydr1_PEP hydrolase, 86.0 1.7 3.6E-05 39.0 5.6 72 213-306 201-273 (274)
59 COG0400 Predicted esterase [Ge 84.6 2.3 4.9E-05 36.6 5.5 60 218-307 145-204 (207)
60 PLN02872 triacylglycerol lipas 83.8 2.1 4.6E-05 40.7 5.4 61 219-307 325-388 (395)
61 KOG2382 Predicted alpha/beta h 83.8 0.91 2E-05 41.4 2.8 30 277-306 282-311 (315)
62 PLN02211 methyl indole-3-aceta 82.3 3 6.5E-05 37.3 5.6 59 219-307 211-269 (273)
63 TIGR01249 pro_imino_pep_1 prol 82.2 5 0.00011 36.4 7.1 51 219-300 248-298 (306)
64 PF12695 Abhydrolase_5: Alpha/ 81.0 2.5 5.4E-05 33.0 4.2 32 214-245 99-130 (145)
65 COG1506 DAP2 Dipeptidyl aminop 79.6 5.1 0.00011 40.5 6.7 60 219-305 551-610 (620)
66 COG0596 MhpC Predicted hydrola 79.1 4.6 9.9E-05 33.9 5.5 62 216-305 218-279 (282)
67 TIGR01836 PHA_synth_III_C poly 76.3 5.5 0.00012 36.9 5.5 62 218-307 285-349 (350)
68 PF00326 Peptidase_S9: Prolyl 76.2 7 0.00015 33.2 5.8 54 7-70 53-106 (213)
69 PRK13604 luxD acyl transferase 75.6 5.8 0.00012 36.3 5.2 58 219-304 202-259 (307)
70 PRK10985 putative hydrolase; P 74.8 9.5 0.00021 34.9 6.6 46 219-293 255-300 (324)
71 KOG1552 Predicted alpha/beta h 72.7 6.4 0.00014 34.9 4.6 60 219-307 192-251 (258)
72 PF01764 Lipase_3: Lipase (cla 72.7 6.3 0.00014 30.9 4.3 54 4-63 53-106 (140)
73 PLN02454 triacylglycerol lipas 71.7 7.6 0.00017 37.0 5.2 60 3-65 214-273 (414)
74 KOG1515 Arylacetamide deacetyl 71.5 14 0.00031 34.3 6.8 54 8-67 158-211 (336)
75 PF12697 Abhydrolase_6: Alpha/ 70.8 5.4 0.00012 33.0 3.8 49 4-65 55-103 (228)
76 PRK05077 frsA fermentation/res 70.7 6.7 0.00014 37.5 4.7 51 4-64 251-301 (414)
77 PF11144 DUF2920: Protein of u 68.7 8.3 0.00018 36.5 4.7 54 3-66 168-222 (403)
78 PF05728 UPF0227: Uncharacteri 65.7 5.4 0.00012 33.7 2.6 38 17-67 58-95 (187)
79 TIGR01838 PHA_synth_I poly(R)- 65.5 7.9 0.00017 38.4 4.1 25 219-243 415-439 (532)
80 PF07859 Abhydrolase_3: alpha/ 64.9 8.9 0.00019 32.3 3.9 45 15-65 68-112 (211)
81 COG2267 PldB Lysophospholipase 64.4 15 0.00032 33.5 5.4 65 217-308 226-294 (298)
82 PF00681 Plectin: Plectin repe 64.4 4.4 9.5E-05 25.6 1.4 32 61-92 12-43 (45)
83 TIGR01250 pro_imino_pep_2 prol 63.9 7.3 0.00016 33.8 3.3 41 14-64 92-132 (288)
84 TIGR03611 RutD pyrimidine util 63.8 5 0.00011 34.3 2.1 49 4-65 69-117 (257)
85 TIGR03695 menH_SHCHC 2-succiny 62.7 11 0.00023 31.7 4.0 38 16-63 68-105 (251)
86 PHA02857 monoglyceride lipase; 61.9 14 0.00031 32.5 4.8 41 15-65 94-134 (276)
87 PRK10162 acetyl esterase; Prov 61.1 11 0.00023 34.6 4.0 46 16-65 152-197 (318)
88 PF00975 Thioesterase: Thioest 61.0 16 0.00035 31.1 4.9 38 19-63 67-104 (229)
89 KOG1455 Lysophospholipase [Lip 60.1 8.8 0.00019 34.9 3.0 25 219-243 246-270 (313)
90 TIGR01607 PST-A Plasmodium sub 59.9 13 0.00027 34.4 4.2 46 17-64 141-186 (332)
91 PLN02211 methyl indole-3-aceta 58.4 17 0.00036 32.4 4.6 48 4-63 75-122 (273)
92 cd00519 Lipase_3 Lipase (class 58.1 20 0.00043 31.0 4.9 43 17-64 127-169 (229)
93 PLN02571 triacylglycerol lipas 58.1 22 0.00048 33.9 5.5 61 3-64 212-276 (413)
94 COG1506 DAP2 Dipeptidyl aminop 57.9 10 0.00022 38.3 3.5 53 3-67 459-511 (620)
95 PRK03204 haloalkane dehalogena 57.8 17 0.00038 32.5 4.7 40 15-64 98-137 (286)
96 KOG2551 Phospholipase/carboxyh 57.8 26 0.00057 30.4 5.4 57 219-305 163-221 (230)
97 PF08840 BAAT_C: BAAT / Acyl-C 55.9 19 0.0004 31.0 4.3 46 6-62 10-55 (213)
98 TIGR03056 bchO_mg_che_rel puta 55.3 16 0.00035 31.7 4.0 48 5-65 85-132 (278)
99 PRK05077 frsA fermentation/res 55.0 25 0.00055 33.6 5.5 57 219-307 355-411 (414)
100 PRK10566 esterase; Provisional 53.0 16 0.00034 31.6 3.5 31 7-37 96-126 (249)
101 cd00741 Lipase Lipase. Lipase 52.6 27 0.00059 27.9 4.6 42 17-63 27-68 (153)
102 PF10340 DUF2424: Protein of u 51.7 18 0.0004 34.0 3.8 46 16-66 193-238 (374)
103 PLN02385 hydrolase; alpha/beta 51.0 22 0.00047 32.8 4.3 42 13-64 157-198 (349)
104 PRK07868 acyl-CoA synthetase; 50.8 25 0.00054 37.8 5.2 65 219-312 297-365 (994)
105 PLN02442 S-formylglutathione h 50.8 64 0.0014 28.9 7.2 49 217-290 215-264 (283)
106 PLN02298 hydrolase, alpha/beta 50.1 32 0.0007 31.3 5.2 41 15-65 131-171 (330)
107 PF11288 DUF3089: Protein of u 49.9 19 0.00041 31.0 3.3 33 3-37 82-114 (207)
108 PLN02442 S-formylglutathione h 49.9 25 0.00053 31.6 4.3 45 12-66 137-181 (283)
109 PF06500 DUF1100: Alpha/beta h 48.3 9.1 0.0002 36.5 1.2 53 2-64 245-297 (411)
110 KOG1838 Alpha/beta hydrolase [ 46.6 40 0.00086 32.2 5.1 45 9-63 192-236 (409)
111 TIGR02240 PHA_depoly_arom poly 46.2 22 0.00047 31.4 3.3 40 15-64 88-127 (276)
112 PF03096 Ndr: Ndr family; Int 46.0 10 0.00022 34.2 1.2 34 277-310 248-281 (283)
113 PF07849 DUF1641: Protein of u 45.9 7.7 0.00017 24.1 0.2 17 165-181 15-31 (42)
114 PLN02719 triacylglycerol lipas 43.5 46 0.00099 32.7 5.2 62 3-64 281-346 (518)
115 PF10503 Esterase_phd: Esteras 42.3 35 0.00075 29.7 3.9 28 219-246 169-196 (220)
116 TIGR02821 fghA_ester_D S-formy 42.2 50 0.0011 29.4 5.0 41 15-65 135-175 (275)
117 COG2267 PldB Lysophospholipase 41.9 51 0.0011 30.0 5.1 53 5-67 93-146 (298)
118 PLN02652 hydrolase; alpha/beta 41.9 34 0.00074 32.5 4.1 41 17-65 207-247 (395)
119 PLN02753 triacylglycerol lipas 41.5 53 0.0012 32.4 5.3 62 3-64 295-360 (531)
120 PRK04940 hypothetical protein; 41.1 18 0.0004 30.3 1.9 37 18-67 60-96 (180)
121 PRK11071 esterase YqiA; Provis 40.9 61 0.0013 27.1 5.1 55 218-306 135-189 (190)
122 KOG4569 Predicted lipase [Lipi 40.8 48 0.001 30.7 4.8 53 6-64 162-214 (336)
123 TIGR01840 esterase_phb esteras 40.6 42 0.00091 28.4 4.1 32 220-251 169-200 (212)
124 PLN00413 triacylglycerol lipas 40.1 25 0.00055 34.1 2.9 35 4-41 273-307 (479)
125 PRK00870 haloalkane dehalogena 38.5 27 0.00059 31.3 2.7 47 3-62 103-149 (302)
126 PRK10749 lysophospholipase L2; 38.1 44 0.00096 30.5 4.2 39 16-64 129-167 (330)
127 PF06821 Ser_hydrolase: Serine 37.6 50 0.0011 27.3 4.0 43 219-291 114-156 (171)
128 COG2945 Predicted hydrolase of 36.5 43 0.00092 28.6 3.3 60 215-305 145-204 (210)
129 TIGR02427 protocat_pcaD 3-oxoa 35.0 31 0.00067 28.9 2.4 22 16-37 77-98 (251)
130 COG1073 Hydrolases of the alph 34.9 1.1E+02 0.0023 26.6 6.0 60 220-306 233-295 (299)
131 PF10230 DUF2305: Uncharacteri 34.6 82 0.0018 28.1 5.2 67 165-245 181-247 (266)
132 PF11187 DUF2974: Protein of u 34.4 69 0.0015 27.9 4.5 49 3-61 73-121 (224)
133 TIGR01738 bioH putative pimelo 34.2 23 0.00051 29.6 1.5 36 17-62 64-99 (245)
134 PF03959 FSH1: Serine hydrolas 33.6 49 0.0011 28.3 3.4 48 219-295 161-208 (212)
135 KOG3043 Predicted hydrolase re 33.5 95 0.0021 27.2 5.0 79 212-306 157-238 (242)
136 PRK03592 haloalkane dehalogena 33.1 49 0.0011 29.4 3.5 48 5-65 83-130 (295)
137 PLN02578 hydrolase 32.9 41 0.0009 31.1 3.1 45 5-62 142-186 (354)
138 TIGR00976 /NonD putative hydro 32.8 64 0.0014 32.1 4.5 50 5-65 85-134 (550)
139 PLN02965 Probable pheophorbida 32.7 49 0.0011 28.8 3.4 46 5-63 61-107 (255)
140 PF00561 Abhydrolase_1: alpha/ 32.3 28 0.00062 29.0 1.7 48 3-63 32-79 (230)
141 PF05414 DUF1717: Viral domain 31.9 28 0.0006 25.1 1.3 12 218-229 39-50 (101)
142 PF08060 NOSIC: NOSIC (NUC001) 31.8 26 0.00057 22.9 1.1 15 2-16 20-35 (53)
143 PRK11071 esterase YqiA; Provis 31.7 42 0.0009 28.1 2.6 32 3-37 49-80 (190)
144 TIGR03343 biphenyl_bphD 2-hydr 31.6 47 0.001 29.0 3.1 44 5-61 91-134 (282)
145 PLN02934 triacylglycerol lipas 31.6 97 0.0021 30.5 5.3 35 4-41 310-344 (515)
146 PLN02162 triacylglycerol lipas 31.3 46 0.001 32.3 3.0 33 5-40 268-300 (475)
147 PLN02408 phospholipase A1 31.1 92 0.002 29.3 5.0 56 4-64 187-242 (365)
148 PLN00021 chlorophyllase 30.8 49 0.0011 30.4 3.1 44 16-64 124-167 (313)
149 PF01738 DLH: Dienelactone hyd 30.5 2.2E+02 0.0048 23.9 7.1 35 212-246 138-172 (218)
150 PLN02324 triacylglycerol lipas 30.1 1.1E+02 0.0023 29.4 5.2 60 4-64 202-266 (415)
151 KOG4391 Predicted alpha/beta h 28.7 50 0.0011 28.8 2.5 52 4-65 135-186 (300)
152 KOG2931 Differentiation-relate 28.1 83 0.0018 28.7 3.9 34 277-310 275-308 (326)
153 PLN02894 hydrolase, alpha/beta 27.5 55 0.0012 31.1 3.0 38 16-63 174-211 (402)
154 PF07389 DUF1500: Protein of u 27.3 44 0.00095 24.3 1.7 32 2-41 10-41 (100)
155 PLN02761 lipase class 3 family 27.1 1.2E+02 0.0025 30.0 5.0 62 3-64 276-343 (527)
156 PRK10349 carboxylesterase BioH 27.1 40 0.00087 29.2 1.8 36 16-61 72-107 (256)
157 COG3571 Predicted hydrolase of 26.8 43 0.00094 27.8 1.7 26 15-40 86-111 (213)
158 cd00707 Pancreat_lipase_like P 26.7 76 0.0016 28.4 3.6 38 15-62 109-146 (275)
159 PF03403 PAF-AH_p_II: Platelet 26.4 60 0.0013 30.7 2.9 38 19-67 229-266 (379)
160 PLN02802 triacylglycerol lipas 26.1 1.2E+02 0.0026 29.9 4.9 55 5-64 318-372 (509)
161 PLN02824 hydrolase, alpha/beta 25.6 61 0.0013 28.8 2.8 47 4-63 91-137 (294)
162 TIGR00190 thiC thiamine biosyn 25.6 54 0.0012 31.1 2.4 31 279-310 258-288 (423)
163 PF05577 Peptidase_S28: Serine 25.2 1.4E+02 0.0031 28.4 5.4 63 3-75 98-160 (434)
164 PF08840 BAAT_C: BAAT / Acyl-C 25.1 46 0.001 28.5 1.8 48 219-289 115-163 (213)
165 TIGR03101 hydr2_PEP hydrolase, 25.1 1.1E+02 0.0025 27.3 4.3 40 17-66 98-137 (266)
166 smart00250 PLEC Plectin repeat 24.4 38 0.00083 20.2 0.8 26 61-86 12-37 (38)
167 PRK14875 acetoin dehydrogenase 24.2 57 0.0012 30.0 2.4 39 14-62 193-231 (371)
168 COG4569 MhpF Acetaldehyde dehy 23.9 69 0.0015 27.5 2.5 26 268-294 258-283 (310)
169 PLN02847 triacylglycerol lipas 23.5 1.1E+02 0.0025 30.7 4.3 48 5-60 241-288 (633)
170 COG0429 Predicted hydrolase of 23.3 1.4E+02 0.003 27.7 4.5 40 16-62 146-185 (345)
171 KOG2183 Prolylcarboxypeptidase 22.7 1E+02 0.0023 29.5 3.7 32 4-39 153-184 (492)
172 TIGR03100 hydr1_PEP hydrolase, 22.7 2.3E+02 0.0051 25.0 6.0 42 11-65 95-136 (274)
173 COG4474 Uncharacterized protei 22.2 1.2E+02 0.0027 25.1 3.6 32 208-246 31-62 (180)
174 PRK05371 x-prolyl-dipeptidyl a 21.8 3.3E+02 0.0071 28.5 7.5 29 218-246 454-482 (767)
175 PRK14567 triosephosphate isome 21.7 1.3E+02 0.0029 26.7 4.0 54 2-66 185-238 (253)
176 TIGR01840 esterase_phb esteras 21.4 79 0.0017 26.7 2.5 39 15-63 92-130 (212)
177 PRK11126 2-succinyl-6-hydroxy- 21.3 69 0.0015 27.2 2.2 46 5-62 56-101 (242)
178 PRK10115 protease 2; Provision 21.3 2.8E+02 0.006 28.6 6.8 28 219-246 605-633 (686)
179 COG4757 Predicted alpha/beta h 20.7 57 0.0012 28.8 1.4 18 16-33 103-120 (281)
180 PLN02511 hydrolase 20.7 2.2E+02 0.0047 26.8 5.6 25 5-32 163-187 (388)
181 COG0657 Aes Esterase/lipase [L 20.7 1.7E+02 0.0036 26.4 4.7 46 16-67 150-195 (312)
182 KOG3253 Predicted alpha/beta h 20.3 1.9E+02 0.0041 29.2 5.0 33 213-245 298-330 (784)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-76 Score=553.92 Aligned_cols=301 Identities=41% Similarity=0.746 Sum_probs=260.5
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcC
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHG 80 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~g 80 (320)
+|.||++||++||||++|||||+||||||||||.||++|++.|+....+.|||||++||||++|+..|..++.+|++.||
T Consensus 151 ~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~ 230 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHG 230 (454)
T ss_pred HHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcc
Confidence 48999999999999999999999999999999999999999997544568999999999999999999999999999999
Q ss_pred CCChHHHHHHHccCCCCCccCCCCCCCCcchHHHHHHHHHHhCCCCCcccCCCcCCCCchHHHHHHHhhhhhccccCccc
Q 020909 81 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 160 (320)
Q Consensus 81 li~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
||++++++.+++.|.............+..|.++++.........++.|+++.+.|....... .....+..+++
T Consensus 231 liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~------~~~~~~~~~~~ 304 (454)
T KOG1282|consen 231 LISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYEL------KKPTDCYGYDP 304 (454)
T ss_pred cCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHHHhccCchhhhcchhhccccccc------cccccccccCC
Confidence 999999999999998753211111133678999999987555458899999989997521100 00112345688
Q ss_pred ccchhhhhccCchHHHHHhCCCCCCccccccccccccccCCCCCCCCcHHHHHHHHhCC-ccEEEEecCCCcccCcccHH
Q 020909 161 CMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNG-IPVWVFSGDQDSVVPLLGSR 239 (320)
Q Consensus 161 c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~LL~~~-irVLiY~Gd~D~i~n~~G~~ 239 (320)
|.....+.|||+++||+||||+....| +|+.||+.+...+.+...++++.+..++.++ +|||||+||.|++||+.||+
T Consensus 305 c~~~~~~~ylN~~~VrkALh~~~~~~~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~ 383 (454)
T KOG1282|consen 305 CLSDYAEKYLNRPEVRKALHANKTSIG-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQ 383 (454)
T ss_pred chhhhHHHhcCCHHHHHHhCCCCCCCC-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhH
Confidence 988777999999999999999876544 8999999998777788889999999999865 99999999999999999999
Q ss_pred HHHHHHHHhcCCcccccccccccC-CeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCCCCC
Q 020909 240 TLIRELARDLNFEVTVPYGAWFHK-QQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRLPNN 313 (320)
Q Consensus 240 ~~i~~l~~~~~~~~~~~~~~w~~~-~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~~~~ 313 (320)
+||+.| +++...+|+||+++ +|+|||+++|++ |+|+||+|||||||+|||++|++||++||.|++++..
T Consensus 384 ~~i~~L----~~~~~~~~~pW~~~~~qvaG~~~~Y~~-ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 384 AWIKSL----NLSITDEWRPWYHKGGQVAGYTKTYGG-LTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred HHHHhc----cCccccCccCCccCCCceeeeEEEecC-EEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999966 57788999999995 899999999999 9999999999999999999999999999999999764
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.1e-69 Score=497.90 Aligned_cols=283 Identities=24% Similarity=0.461 Sum_probs=232.4
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcC
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHG 80 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~g 80 (320)
++.||++||++||+|+++||||+||||||||||+||++|+++|+....++||||||+||||||+|..|..++.+|+|.+|
T Consensus 34 ~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~g 113 (319)
T PLN02213 34 THEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMG 113 (319)
T ss_pred HHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchhHhhHHHhcC
Confidence 47899999999999999999999999999999999999999887544568999999999999999999999999999999
Q ss_pred CCChHHHHHHHccCCCCCccCCCCCCCCcchHHHHHHHHHHhCCCCCcccCCCcCCCCchHHHHHHHhhhhhccccCccc
Q 020909 81 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 160 (320)
Q Consensus 81 li~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
||++++++.+.+.|...... ...+...|.+++.......+ .+|+||++.+.|.... . ..+.
T Consensus 114 li~~~~~~~~~~~c~~~~~~---~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~--~~~~ 174 (319)
T PLN02213 114 LISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKCTA-KINIHHILTPDCDVTN-------------V--TSPD 174 (319)
T ss_pred CCCHHHHHHHHHhcCCCccC---CCCCcHHHHHHHHHHHHHHh-cCCHhhcccCcccCcc-------------C--CCCC
Confidence 99999999999999643211 11345679988776554443 6899999866564210 0 1124
Q ss_pred ccc---hhhhhccCchHHHHHhCCCCCCccccccccccccccCCCCCCCCcHHHHHHHHhCCccEEEEecCCCcccCccc
Q 020909 161 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 237 (320)
Q Consensus 161 c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G 237 (320)
|.. ..+..|||+++||+||||+... +..|+.||..+.+. .|.. +..+.+..+|.+|+||||||||.|++||+.|
T Consensus 175 c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~v~~~-~d~~-~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g 251 (319)
T PLN02213 175 CYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLA 251 (319)
T ss_pred cccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcccccc-cccc-cchHHHHHHHhcCceEEEEECCcCeeCCcHh
Confidence 542 3579999999999999997532 14899999887632 4554 4455555566679999999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 238 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 238 ~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
+++|+++|+|. ...+|++|+.+++++||+|+|+++|||++|+||||||| +||++|++||++||.++++
T Consensus 252 ~~~wi~~L~w~----~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 252 TQAWIRSLNYS----PIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred HHHHHHhcCCC----CCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 99999988654 34569999999999999999974599999999999998 7999999999999999764
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.6e-66 Score=490.01 Aligned_cols=283 Identities=24% Similarity=0.459 Sum_probs=233.6
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcC
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHG 80 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~g 80 (320)
+++||++||++||+|+++||||+||||||||||.+|++|++.|+....++||||||+||||+++|..|..++.+|+|.+|
T Consensus 148 ~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~g 227 (433)
T PLN03016 148 THEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMG 227 (433)
T ss_pred HHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcC
Confidence 47899999999999999999999999999999999999999887544568999999999999999999999999999999
Q ss_pred CCChHHHHHHHccCCCCCccCCCCCCCCcchHHHHHHHHHHhCCCCCcccCCCcCCCCchHHHHHHHhhhhhccccCccc
Q 020909 81 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 160 (320)
Q Consensus 81 li~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
||++++++.+++.|...... ...+...|..++..+....+ .+|+||++.+.|.... . ..+.
T Consensus 228 lI~~~~~~~i~~~c~~~~~~---~~~~~~~C~~~~~~~~~~~~-~~n~yni~~~~~~~~~-------------~--~~~~ 288 (433)
T PLN03016 228 LISDEIYEPMKRICNGNYYN---VDPSNTQCLKLTEEYHKCTA-KINIHHILTPDCDVTN-------------V--TSPD 288 (433)
T ss_pred CCCHHHHHHHHHHhcccccc---CCCchHHHHHHHHHHHHHhc-CCChhhccCCcccccc-------------c--CCCc
Confidence 99999999999999643211 11345679988876654443 7899999866674210 0 1124
Q ss_pred ccc---hhhhhccCchHHHHHhCCCCCCccccccccccccccCCCCCCCCcHHHHHHHHhCCccEEEEecCCCcccCccc
Q 020909 161 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 237 (320)
Q Consensus 161 c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G 237 (320)
|.. ..++.|||+++||+||||+.... ..|..||..+.+. .|.+ +..+.+..++.+|+|||||+||.|++||+.|
T Consensus 289 c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~~-~d~~-~~~~~~~~~l~~~irVLiY~Gd~D~icn~~G 365 (433)
T PLN03016 289 CYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPYN-HDIV-SSIPYHMNNSISGYRSLIYSGDHDIAVPFLA 365 (433)
T ss_pred ccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccccc-cccc-hhhHHHHHHHhcCceEEEEECCccccCCcHh
Confidence 543 35789999999999999975322 4799999887632 4544 4455555666679999999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 238 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 238 ~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
+++|+++|+|. ...+|++|+.+++++||+|+|+++|||++|+||||||| +||++|++|+++||.|+++
T Consensus 366 t~~wi~~L~w~----~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 366 TQAWIRSLNYS----PIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred HHHHHHhCCCC----CCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999988544 45679999999999999999974499999999999998 7999999999999999865
No 4
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2e-65 Score=484.06 Aligned_cols=285 Identities=24% Similarity=0.443 Sum_probs=229.1
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcC
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHG 80 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~g 80 (320)
+++||++||++||+|+++||||+||||||||||.||++|+++|++...++||||||+|||||+||..|..++.+|++.+|
T Consensus 150 ~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~g 229 (437)
T PLN02209 150 IHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMS 229 (437)
T ss_pred HHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccC
Confidence 47899999999999999999999999999999999999999886544568999999999999999999999999999999
Q ss_pred CCChHHHHHHHccCCCCCccCCCCCCCCcchHHHHHHHHHHhCCCCCcccCCCcCCCCchHHHHHHHhhhhhccccCccc
Q 020909 81 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELRLRKMATKMSVGVDV 160 (320)
Q Consensus 81 li~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 160 (320)
||++++++.+++.|...... ....+..|.+++..+.... ..+|.|++....|..... ......
T Consensus 230 lI~~~~~~~~~~~c~~~~~~---~~~~~~~C~~~i~~~~~~~-~~~~~~~~~~~~c~~~~~-------------~~~~~~ 292 (437)
T PLN02209 230 LISDELYESLKRICKGNYFS---VDPSNKKCLKLVEEYHKCT-DNINSHHTLIANCDDSNT-------------QHISPD 292 (437)
T ss_pred CCCHHHHHHHHHhccccccc---CCCChHHHHHHHHHHHHHh-hcCCcccccccccccccc-------------ccCCCC
Confidence 99999999999999642111 1133567988877654333 357777765555743210 011234
Q ss_pred ccc---hhhhhccCchHHHHHhCCCCCCccccccccccccccCCCCCCCCcHHHHHHHHhCCccEEEEecCCCcccCccc
Q 020909 161 CMT---LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLG 237 (320)
Q Consensus 161 c~~---~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G 237 (320)
|.+ ..+..|||+++||+||||+.... ..|..|+..+.. ..|.+ ++.+.+-.+|.+|+|||||+||.|++||+.|
T Consensus 293 c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~~-~~d~~-~~~~~~~~~l~~girVLiY~GD~D~icn~~G 369 (437)
T PLN02209 293 CYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIPY-KSDIR-SSIPYHMNNSINGYRSLIFSGDHDITMPFQA 369 (437)
T ss_pred cccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhhc-ccchh-hhHHHHHHHHhcCceEEEEECCccccCCcHh
Confidence 533 35789999999999999974322 479999865432 24544 3445455556679999999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 238 SRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 238 ~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
+++|+++|+|. ...+|++|+.+++++||+|+|+|+|||++|+||||||| +||++|++||++||.++++
T Consensus 370 te~wi~~L~w~----~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 370 TQAWIKSLNYS----IIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred HHHHHHhcCCc----cCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 99999988554 45579999999999999999984499999999999998 7999999999999999875
No 5
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.6e-65 Score=487.99 Aligned_cols=288 Identities=32% Similarity=0.561 Sum_probs=226.4
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcC
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHG 80 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~g 80 (320)
+++||++||.+||+|+++||||+||||||||||.+|.+|+++|+....++||||||+||||++||..|+.++.+|+|.+|
T Consensus 119 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~g 198 (415)
T PF00450_consen 119 LYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHG 198 (415)
T ss_dssp HHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccccccceeecccccccC
Confidence 47899999999999999999999999999999999999999998654568999999999999999999999999999999
Q ss_pred CCChHHHHHHHccCCCCCccCCCCCCCCcchHHHHHHHHHH-----hCCCCCcccCCCcCCCCchHHHHHHHhhhhhccc
Q 020909 81 MISDEIGLTIMSDCDFDDYVSGTSHNMTNSCIEAITEANKI-----VGDYINNYDVILDVCYPTIVEQELRLRKMATKMS 155 (320)
Q Consensus 81 li~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~~~~~~~-----~~~~~n~ydi~~~~c~~~~~~~~~~~~~~~~~~~ 155 (320)
+|++++++.+.+.|..... .......|.+.+..+... ....+|+||++.++|... .......
T Consensus 199 li~~~~~~~~~~~~~~~~~----~~~~~~~c~~~~~~~~~~~~~~~~~~~~n~Ydi~~~~~~~~---------~~~~~~~ 265 (415)
T PF00450_consen 199 LIDDQQYDDLNKACEACPQ----CQKAITECAAALDELSCQYAISQCNGGINPYDIRQPCYNPS---------RSSYDNS 265 (415)
T ss_dssp SS-HHHHHHHHHHHTTSHS----SSCCHHHHHHHHHHHHHHCHHHHHHTTSETTSTTSEETT-S---------HCTTCCC
T ss_pred cccHHHHHHHHHHhhcccc----ccchhhHHHHHHHhhhhhcccccccCCcceeeeeccccccc---------ccccccc
Confidence 9999999999988864311 123457798888776542 124899999998755311 0000111
Q ss_pred cCcccccchhhhhccCchHHHHHhCCCCCCcccccccccccc-ccC-CCCCCCCcHHHHHHHHhCCccEEEEecCCCccc
Q 020909 156 VGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVL-NYS-DTDSNINILPVLKRIIQNGIPVWVFSGDQDSVV 233 (320)
Q Consensus 156 ~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v-~~~-~~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~ 233 (320)
...+++....+..|||+++||+||||+... ..+|+.|++.| ... ..|.+.++.+.++.||++++|||||+||.|++|
T Consensus 266 ~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~-~~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~ 344 (415)
T PF00450_consen 266 PSNDPPDDDYLEAYLNRPDVREALHVPVDS-NVNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLIC 344 (415)
T ss_dssp CTTTTTCHHHHHHHHTSHHHHHHTT-STTT-SSS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS
T ss_pred ccccccchhhHHHHhccHHHHHhhCCCccc-CCcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEE
Confidence 122233345789999999999999997322 25999999977 333 367889999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHhcCCccccccccccc--CCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhcC
Q 020909 234 PLLGSRTLIRELARDLNFEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVHG 307 (320)
Q Consensus 234 n~~G~~~~i~~l~~~~~~~~~~~~~~w~~--~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~ 307 (320)
|+.|+++||++|+ +....+|+.|.. +++++||+|+++| |||++|+|||||||+|||++|++||++||+|
T Consensus 345 n~~Gt~~~i~~L~----w~~~~~f~~~~~~~~~~~~G~~k~~~~-ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 345 NFLGTERWIDNLN----WSGKDGFRQWPRKVNGQVAGYVKQYGN-LTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp -HHHHHHHHHCTE----CTEEEEEEEEEEETTCSEEEEEEEETT-EEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred Eeccchhhhhccc----cCcccccccccccccccccceeEEecc-EEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 9999999999764 445567778876 8999999999999 9999999999999999999999999999986
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=4e-63 Score=473.65 Aligned_cols=285 Identities=25% Similarity=0.403 Sum_probs=235.0
Q ss_pred ChHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHH--
Q 020909 1 MHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWS-- 78 (320)
Q Consensus 1 ~~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~-- 78 (320)
+++||+.||++||+|++++|||+||||||+|||.+|.+|+++|+.+..++||||||+|||||+||..|+.++.+|+|.
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~ 233 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWC 233 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcc
Confidence 478999999999999999999999999999999999999999876555789999999999999999999999999996
Q ss_pred -----cCCCChHHHHHHHc---cCCCCCccCCC-CCCCCcchHHHHHHHHHH----hCCCCCcccCCCcCCCCchHHHHH
Q 020909 79 -----HGMISDEIGLTIMS---DCDFDDYVSGT-SHNMTNSCIEAITEANKI----VGDYINNYDVILDVCYPTIVEQEL 145 (320)
Q Consensus 79 -----~gli~~~~~~~~~~---~c~~~~~~~~~-~~~~~~~C~~~~~~~~~~----~~~~~n~ydi~~~~c~~~~~~~~~ 145 (320)
+|+|++++++.+.+ .|......+.. .......|..+...|... ...++|+||++.. |..
T Consensus 234 ~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~~------- 305 (462)
T PTZ00472 234 KEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CIG------- 305 (462)
T ss_pred cccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHhcCCChhheecc-CCC-------
Confidence 47999999988764 34210000000 001223465444333221 1236899999865 632
Q ss_pred HHhhhhhccccCcccccc-hhhhhccCchHHHHHhCCCCCCccccccccccccccCC-CCCCCCcHHHHHHHHhCCccEE
Q 020909 146 RLRKMATKMSVGVDVCMT-LERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSNINILPVLKRIIQNGIPVW 223 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~c~~-~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~-~d~~~~~~~~~~~LL~~~irVL 223 (320)
+.|.+ ..++.|||+++||+||||+. .+|+.|++.|...+ .|.+.++.+.++.||++|+|||
T Consensus 306 -------------~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVL 368 (462)
T PTZ00472 306 -------------PLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVM 368 (462)
T ss_pred -------------CCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEE
Confidence 24544 46899999999999999973 48999999887766 6888889999999999999999
Q ss_pred EEecCCCcccCcccHHHHHHHHHHhcC-Cccccccccc-ccCCeeeeEEEEeC-----CeeEEEEEcCCcccCccCCcHH
Q 020909 224 VFSGDQDSVVPLLGSRTLIRELARDLN-FEVTVPYGAW-FHKQQVGGWGTEYG-----NLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 224 iY~Gd~D~i~n~~G~~~~i~~l~~~~~-~~~~~~~~~w-~~~~~~~G~~~~~~-----~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
||+||.|++||+.|+++|+++|+|... .+.+++|++| ..+++++||+|+++ + |+|++|++||||||+|||++
T Consensus 369 iYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~-l~~~~V~~AGH~vp~d~P~~ 447 (462)
T PTZ00472 369 IYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSG-FSFVQVYNAGHMVPMDQPAV 447 (462)
T ss_pred EEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCC-eEEEEECCCCccChhhHHHH
Confidence 999999999999999999999998742 3357899999 56889999999999 8 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCC
Q 020909 297 ALHLFSSFVHGRRLP 311 (320)
Q Consensus 297 a~~m~~~fl~~~~~~ 311 (320)
+++|+++|+.|++++
T Consensus 448 ~~~~i~~fl~~~~~~ 462 (462)
T PTZ00472 448 ALTMINRFLRNRPLS 462 (462)
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999998763
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-43 Score=307.85 Aligned_cols=298 Identities=19% Similarity=0.206 Sum_probs=224.8
Q ss_pred hHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHHHHHcCC
Q 020909 2 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEFFWSHGM 81 (320)
Q Consensus 2 ~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~~~~~gl 81 (320)
...|+.||..||||+.+||||+-|||||+..|.+|..+.+..+++ +++.|+.|+++|+.||+|..-..+..+|++..++
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G-~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~ 184 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG-EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSR 184 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-ceeecceeEEccCcccChhHhhhcchHHHHhhhh
Confidence 578999999999999999999999999999999999999998875 5789999999999999999999999999999999
Q ss_pred CChHHHHHHHc---cCCCCCccCCCCCCCCcchHHHHHHHHHHhCCCCCcccCCCcCCCCchHHHHHH---H-hhhhhcc
Q 020909 82 ISDEIGLTIMS---DCDFDDYVSGTSHNMTNSCIEAITEANKIVGDYINNYDVILDVCYPTIVEQELR---L-RKMATKM 154 (320)
Q Consensus 82 i~~~~~~~~~~---~c~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~n~ydi~~~~c~~~~~~~~~~---~-~~~~~~~ 154 (320)
+|++..+...+ .|... ...+.+..+.......-+.+... .+.+|.||+.+++-..+....... . ...++..
T Consensus 185 LDD~GLds~ns~A~k~~~~-v~~g~~~~AT~~Wg~~e~li~~~-sn~VdfYNil~~t~~d~~~~ss~~~~~~~~~~rrl~ 262 (414)
T KOG1283|consen 185 LDDNGLDSSNSGAEKGKGG-VDGGKWGGATGGWGGGENLISRE-SNGVDFYNILTKTLGDQYSLSSRAAMTPEEVMRRLL 262 (414)
T ss_pred hcccCccchhhhHHhhccc-ccCCccccccccccCcCcceeec-ccCcceeeeeccCCCcchhhhhhhhcchHHHHHHHH
Confidence 99988776543 34211 11222333322222222222222 347899999876543221111100 0 0000000
Q ss_pred ccCcccccchhhhhccCchHHHHHhCCCCCCccccccccccccccCC-CCCCCCcHHHHHHHHhCCccEEEEecCCCccc
Q 020909 155 SVGVDVCMTLERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD-TDSNINILPVLKRIIQNGIPVWVFSGDQDSVV 233 (320)
Q Consensus 155 ~~~~~~c~~~~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~-~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~ 233 (320)
....-+-..+.++++||-| ||++|+|.+.++ .|-.-+..++-.. .|+|+|+...+.+||++|++|.||||++|.||
T Consensus 263 ~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~--~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc 339 (414)
T KOG1283|consen 263 VRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGV--KWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLIC 339 (414)
T ss_pred hccCcchhHHHHHHHhccc-ccccccccCCCC--cccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhh
Confidence 0000000124589999998 999999987664 8999887776555 89999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHhcCC-cccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHHHHHHHHhc
Q 020909 234 PLLGSRTLIRELARDLNF-EVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRALHLFSSFVH 306 (320)
Q Consensus 234 n~~G~~~~i~~l~~~~~~-~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 306 (320)
++.|+++|+..|.|...- ....+|...+..-..+||.|+|+| |+|.+|..||||||.|+|+.|.+|++-+.+
T Consensus 340 ~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktykn-l~f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 340 ATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKN-LSFFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred cccchhhhhhheecCCCCccccceeeeccceeecchhhhhhcc-ceeEEeecccCcccCCCHHHHhhheeeccc
Confidence 999999999999987432 234455555556688999999999 999999999999999999999999986653
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-37 Score=285.24 Aligned_cols=284 Identities=23% Similarity=0.323 Sum_probs=215.6
Q ss_pred hHHHHHHHHhCCCCCCC--ceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCC-CCCCCCcchhHHHHHHH
Q 020909 2 HVFMMNWYEKFPEFKSR--ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP-LLRLDQDVPAIYEFFWS 78 (320)
Q Consensus 2 ~~fL~~F~~~fP~~~~~--~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg-~~~p~~q~~~~~~~~~~ 78 (320)
+.|++.||+.||++.+. ++||+||||||+|+|.||.+|+++|... +-.+||++++|||| +|+|..|+..+..+++.
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~-~~~~nlssvligng~~t~Pl~~~~~y~~~a~~ 258 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL-NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAE 258 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc-CCceEeeeeeecCCcccChhHHHHHhhhhHhh
Confidence 57999999999999988 9999999999999999999999986332 33699999999999 99999999999999986
Q ss_pred cC----CCChHHHHHHHccCCCCC---ccCCCCC-CCCcchHHHHHHHHHHh--------CCCCCcccCCCcCCCCchHH
Q 020909 79 HG----MISDEIGLTIMSDCDFDD---YVSGTSH-NMTNSCIEAITEANKIV--------GDYINNYDVILDVCYPTIVE 142 (320)
Q Consensus 79 ~g----li~~~~~~~~~~~c~~~~---~~~~~~~-~~~~~C~~~~~~~~~~~--------~~~~n~ydi~~~~c~~~~~~ 142 (320)
.+ ..+.+.++.+.+.|.... ...+++. .....|..+...|.... ++..|.||++.. |....
T Consensus 259 ~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g-- 335 (498)
T COG2939 259 KGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE-CRDPG-- 335 (498)
T ss_pred cCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccccccccccchhh-cCCCC--
Confidence 54 556777788888775431 2222222 23456777666553211 224788888754 53210
Q ss_pred HHHHHhhhhhccccCcccccch--hhhhccCchHHHHHhCCCCCCccccccccccccccCC----CCCCCCcHHHHHHHH
Q 020909 143 QELRLRKMATKMSVGVDVCMTL--ERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSD----TDSNINILPVLKRII 216 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~c~~~--~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~----~d~~~~~~~~~~~LL 216 (320)
..-.|++. ....|++-..+++++.... ..|..|+..+...+ .++..+....+..++
T Consensus 336 --------------~~~~~y~~~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~l 397 (498)
T COG2939 336 --------------LGGSCYDTLSTSLDYFNFDPEQEVNDPEV----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLL 397 (498)
T ss_pred --------------cccccccceeeccccccccchhccccccc----cchhccchHHHHhhhhhcCCcccccHHHHhhhh
Confidence 01134442 4678888777888887542 37999997664433 677888899999999
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhc--CCccccccccccc--CCeeeeEEEEeCCeeEEEEEcCCcccCccC
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDL--NFEVTVPYGAWFH--KQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 292 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~--~~~~~~~~~~w~~--~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~d 292 (320)
.+++.+++|.||.|.+||+.|++.|..+|+|.. ++...+ -.+|.. ..+..|-.++++| |+|+.++.||||||.|
T Consensus 398 v~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~-~~~~~~~~t~e~~~~~~s~~n-~~~~r~y~aGHMvp~d 475 (498)
T COG2939 398 VNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDAS-TPFFWSRLTLEEMGGYKSYRN-LTFLRIYEAGHMVPYD 475 (498)
T ss_pred hcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhc-CCCcccccchhhcccccccCC-ceEEEEecCcceeecC
Confidence 999999999999999999999999999998753 333222 233432 4556666677788 9999999999999999
Q ss_pred CcHHHHHHHHHHhcCCC
Q 020909 293 QPSRALHLFSSFVHGRR 309 (320)
Q Consensus 293 qP~~a~~m~~~fl~~~~ 309 (320)
+|+.+++|++.|+.+..
T Consensus 476 ~P~~~~~~~~~~~~~~~ 492 (498)
T COG2939 476 RPESSLEMVNLWINGYG 492 (498)
T ss_pred ChHHHHHHHHHHHhhcc
Confidence 99999999999998743
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=96.99 E-value=0.0025 Score=56.99 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
-.++||+..|..|.+++..-.+.+.+.+ .+ ..++.|.+|||+++.++|+..
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~----------------------------~~-~~~~~i~~agH~~~~e~p~~~ 272 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNM----------------------------PD-AQLHVFSRCGHWAQWEHADAF 272 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhC----------------------------CC-CEEEEeCCCCcCCcccCHHHH
Confidence 3789999999999999875555444311 12 667889999999999999999
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
.+++..||.
T Consensus 273 ~~~i~~fl~ 281 (282)
T TIGR03343 273 NRLVIDFLR 281 (282)
T ss_pred HHHHHHHhh
Confidence 999999985
No 10
>PRK03204 haloalkane dehalogenase; Provisional
Probab=96.70 E-value=0.0025 Score=57.67 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=46.4
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+|||..|+.|.+++.......+.+. ..+ .++.++.+|||+++.++|++..
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~---------------------------ip~-~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRAT---------------------------FPD-HVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHh---------------------------cCC-CeEEEcCCCcccccccCHHHHH
Confidence 799999999999988755433333211 123 7778899999999999999999
Q ss_pred HHHHHHh
Q 020909 299 HLFSSFV 305 (320)
Q Consensus 299 ~m~~~fl 305 (320)
+++.+|+
T Consensus 279 ~~i~~~~ 285 (286)
T PRK03204 279 AAIIERF 285 (286)
T ss_pred HHHHHhc
Confidence 9999997
No 11
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=96.67 E-value=0.0059 Score=57.22 Aligned_cols=65 Identities=23% Similarity=0.393 Sum_probs=50.8
Q ss_pred CccEEEEecCCCcccCcccH-HHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGS-RTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~-~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
.++|||..|+.|.++|..+. ..+++.+.. ...+ .++.+|.+|||+++.++|++.
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~~------------------------~ip~-~~l~~i~~aGH~~~~E~Pe~~ 346 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLPS------------------------QLPN-VTLYVLEGVGHCPHDDRPDLV 346 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhhc------------------------cCCc-eEEEEcCCCCCCccccCHHHH
Confidence 68999999999999998753 234443310 1123 777889999999999999999
Q ss_pred HHHHHHHhcCC
Q 020909 298 LHLFSSFVHGR 308 (320)
Q Consensus 298 ~~m~~~fl~~~ 308 (320)
.+.+.+|+...
T Consensus 347 ~~~I~~FL~~~ 357 (360)
T PLN02679 347 HEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHhc
Confidence 99999999753
No 12
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.67 E-value=0.0046 Score=53.04 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=47.1
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
+-..+|||.+|..|.+++....+.+.+.+ .+ -++..+.++||+++.++|+.
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLA----------------------------PH-SELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHH
Confidence 33689999999999999976655443311 12 45677889999999999999
Q ss_pred HHHHHHHHh
Q 020909 297 ALHLFSSFV 305 (320)
Q Consensus 297 a~~m~~~fl 305 (320)
..+.+..||
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999886
No 13
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=96.61 E-value=0.0067 Score=52.15 Aligned_cols=60 Identities=25% Similarity=0.383 Sum_probs=47.8
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
-..+||+.+|+.|.++|....+.+.+.+ .+ .++.++.++||+++.++|++.
T Consensus 192 ~~~Pvlii~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~p~~~ 242 (251)
T TIGR02427 192 IAVPTLCIAGDQDGSTPPELVREIADLV----------------------------PG-ARFAEIRGAGHIPCVEQPEAF 242 (251)
T ss_pred cCCCeEEEEeccCCcCChHHHHHHHHhC----------------------------CC-ceEEEECCCCCcccccChHHH
Confidence 4689999999999999976554443311 22 566788999999999999999
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
.+.+..|+.
T Consensus 243 ~~~i~~fl~ 251 (251)
T TIGR02427 243 NAALRDFLR 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999974
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.50 E-value=0.0056 Score=54.20 Aligned_cols=59 Identities=24% Similarity=0.357 Sum_probs=47.8
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++|||.+|+.|.++|....+.+.+.+ .+ ..++.+.++||+++.++|++..
T Consensus 220 ~~P~lii~g~~D~~vp~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~p~~~~ 270 (278)
T TIGR03056 220 TIPLHLIAGEEDKAVPPDESKRAATRV----------------------------PT-ATLHVVPGGGHLVHEEQADGVV 270 (278)
T ss_pred CCCEEEEEeCCCcccCHHHHHHHHHhc----------------------------cC-CeEEEECCCCCcccccCHHHHH
Confidence 689999999999999987666655411 12 4456778999999999999999
Q ss_pred HHHHHHhc
Q 020909 299 HLFSSFVH 306 (320)
Q Consensus 299 ~m~~~fl~ 306 (320)
+.+.+|+.
T Consensus 271 ~~i~~f~~ 278 (278)
T TIGR03056 271 GLILQAAE 278 (278)
T ss_pred HHHHHHhC
Confidence 99999984
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=96.46 E-value=0.0077 Score=52.28 Aligned_cols=59 Identities=20% Similarity=0.258 Sum_probs=47.9
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+||+.+|+.|.+||....+.+.+.+ .+ ..+..+.++||+.+.++|+...
T Consensus 198 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~~~~~~~~ 248 (257)
T TIGR03611 198 QHPVLLIANRDDMLVPYTQSLRLAAAL----------------------------PN-AQLKLLPYGGHASNVTDPETFN 248 (257)
T ss_pred CccEEEEecCcCcccCHHHHHHHHHhc----------------------------CC-ceEEEECCCCCCccccCHHHHH
Confidence 689999999999999987665544311 12 4566788999999999999999
Q ss_pred HHHHHHhc
Q 020909 299 HLFSSFVH 306 (320)
Q Consensus 299 ~m~~~fl~ 306 (320)
+.+.+||.
T Consensus 249 ~~i~~fl~ 256 (257)
T TIGR03611 249 RALLDFLK 256 (257)
T ss_pred HHHHHHhc
Confidence 99999985
No 16
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.44 E-value=0.0076 Score=53.19 Aligned_cols=61 Identities=20% Similarity=0.178 Sum_probs=47.6
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
.-.++|||..|..|.++|....+...+.+ .+ -.++.+.++||+++.++|+.
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i----------------------------~~-~~~~~i~~~gH~~~~e~p~~ 244 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLW----------------------------PH-SESYIFAKAAHAPFISHPAE 244 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCCccccCHHH
Confidence 34789999999999999876554333211 23 66788999999999999999
Q ss_pred HHHHHHHHhc
Q 020909 297 ALHLFSSFVH 306 (320)
Q Consensus 297 a~~m~~~fl~ 306 (320)
..+.+.+|-.
T Consensus 245 f~~~l~~~~~ 254 (256)
T PRK10349 245 FCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHhc
Confidence 9999988854
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=96.38 E-value=0.0078 Score=52.80 Aligned_cols=60 Identities=17% Similarity=0.285 Sum_probs=47.6
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+||+..|+.|..++....+.+.+. ..+ .++.++.++||+.+.++|+...
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~----------------------------~~~-~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQ----------------------------FPQ-ARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHh----------------------------CCC-cEEEEeCCCCCeeeccCHHHHH
Confidence 57999999999988875444433321 023 7778899999999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+.+.+|+..
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999964
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.34 E-value=0.0098 Score=54.03 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=50.4
Q ss_pred HHHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccC
Q 020909 213 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA 292 (320)
Q Consensus 213 ~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~d 292 (320)
..+.+-.++|||..|..|.+++... +.+.+.+ + .-.+ ..++.+.++||+++.+
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~----------~---------------~~~~-~~~~~i~~~gH~~~~e 285 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRI----------P---------------GAAG-QPHPTIKGAGHFLQED 285 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhc----------c---------------cccc-cceeeecCCCccchhh
Confidence 3344558999999999999999643 3322211 0 0011 4567889999999999
Q ss_pred CcHHHHHHHHHHhcCC
Q 020909 293 QPSRALHLFSSFVHGR 308 (320)
Q Consensus 293 qP~~a~~m~~~fl~~~ 308 (320)
+|+.....+..|+...
T Consensus 286 ~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 286 SGEELAEAVLEFIRAT 301 (302)
T ss_pred ChHHHHHHHHHHHhcC
Confidence 9999999999999754
No 19
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.20 E-value=0.0076 Score=54.75 Aligned_cols=62 Identities=31% Similarity=0.461 Sum_probs=47.2
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCee-EEEEEcCCcccCccCCcH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLL-TFVTVRGAAHMVPYAQPS 295 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~L-tf~~V~~AGHmvP~dqP~ 295 (320)
+-.++|+++.|++|.+++........+. ..| + | .-+.+.|+||.|++++|+
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk---------~vp---~----------------l~~~vv~~~~gH~vqqe~p~ 307 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRK---------DVP---R----------------LTERVVIEGIGHFVQQEKPQ 307 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHH---------hhc---c----------------ccceEEecCCcccccccCHH
Confidence 3468999999999999999933332221 111 1 2 346788999999999999
Q ss_pred HHHHHHHHHhc
Q 020909 296 RALHLFSSFVH 306 (320)
Q Consensus 296 ~a~~m~~~fl~ 306 (320)
+..+++..|++
T Consensus 308 ~v~~~i~~f~~ 318 (322)
T KOG4178|consen 308 EVNQAILGFIN 318 (322)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 20
>PRK07581 hypothetical protein; Validated
Probab=96.18 E-value=0.013 Score=54.25 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=49.3
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCccCCcHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSR 296 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~~ 296 (320)
-.++||+..|+.|.++|....+.+.+.+ .+ ..+++|.+ |||+++.++|..
T Consensus 274 I~~PtLvI~G~~D~~~p~~~~~~l~~~i----------------------------p~-a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 274 ITAKTFVMPISTDLYFPPEDCEAEAALI----------------------------PN-AELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEeCCCCCccccccCcHH
Confidence 3689999999999999988776655421 11 55678898 999999999999
Q ss_pred HHHHHHHHhc
Q 020909 297 ALHLFSSFVH 306 (320)
Q Consensus 297 a~~m~~~fl~ 306 (320)
...++++||.
T Consensus 325 ~~~~~~~~~~ 334 (339)
T PRK07581 325 DIAFIDAALK 334 (339)
T ss_pred HHHHHHHHHH
Confidence 9999999985
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=96.16 E-value=0.0082 Score=54.25 Aligned_cols=64 Identities=13% Similarity=0.247 Sum_probs=50.4
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++|||.+|+.|.+++......++..+. .+ -++..+.+|||+++.++|++..
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~---------------------------~~-~~~~~i~~~gH~~~~e~p~~v~ 279 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP---------------------------NQ-LEITVFGAGLHFAQEDSPEEIG 279 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh---------------------------hh-cceeeccCcchhhhhcCHHHHH
Confidence 7899999999999997666666664221 12 4556778999999999999999
Q ss_pred HHHHHHhcCCCC
Q 020909 299 HLFSSFVHGRRL 310 (320)
Q Consensus 299 ~m~~~fl~~~~~ 310 (320)
+.+..|+.....
T Consensus 280 ~~i~~fl~~~~~ 291 (295)
T PRK03592 280 AAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHHhcc
Confidence 999999975443
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=96.07 E-value=0.01 Score=56.06 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=47.2
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++|||..|+.|.+++....+.+.+. -+ ..+++|.+|||+++.++|++..
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~-----------------------------~~-a~l~vIp~aGH~~~~E~Pe~v~ 374 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKS-----------------------------SQ-HKLIELPMAGHHVQEDCGEELG 374 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHh-----------------------------cC-CeEEEECCCCCCcchhCHHHHH
Confidence 67999999999998887655444430 01 5567899999999999999999
Q ss_pred HHHHHHhc
Q 020909 299 HLFSSFVH 306 (320)
Q Consensus 299 ~m~~~fl~ 306 (320)
..+.+|+.
T Consensus 375 ~~I~~Fl~ 382 (383)
T PLN03084 375 GIISGILS 382 (383)
T ss_pred HHHHHHhh
Confidence 99999986
No 23
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=95.96 E-value=0.021 Score=50.26 Aligned_cols=63 Identities=17% Similarity=0.349 Sum_probs=45.8
Q ss_pred HHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCC
Q 020909 214 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 293 (320)
Q Consensus 214 ~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dq 293 (320)
.|.+-+++||+..|+.|.+ +....+.+.+.+ .+ ..++.+.++||+++.++
T Consensus 226 ~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~~e~ 275 (288)
T TIGR01250 226 KLSEIKVPTLLTVGEFDTM-TPEAAREMQELI----------------------------AG-SRLVVFPDGSHMTMIED 275 (288)
T ss_pred HhhccCCCEEEEecCCCcc-CHHHHHHHHHhc----------------------------cC-CeEEEeCCCCCCcccCC
Confidence 3444579999999999985 334443333211 11 44567889999999999
Q ss_pred cHHHHHHHHHHhc
Q 020909 294 PSRALHLFSSFVH 306 (320)
Q Consensus 294 P~~a~~m~~~fl~ 306 (320)
|++..+.+.+|++
T Consensus 276 p~~~~~~i~~fl~ 288 (288)
T TIGR01250 276 PEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999984
No 24
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.93 E-value=0.026 Score=52.60 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=49.7
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEc-CCcccCccCCcHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~-~AGHmvP~dqP~~a 297 (320)
..++|+..|+.|.++|....+...+.+... . -. .+|+.|. +|||+++.++|+..
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-------~-----------------~~-v~~~~i~~~~GH~~~le~p~~~ 342 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALPAA-------G-----------------LR-VTYVEIESPYGHDAFLVETDQV 342 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHhhc-------C-----------------Cc-eEEEEeCCCCCcchhhcCHHHH
Confidence 689999999999999998887776644210 0 00 4566664 89999999999999
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
.+.+.+|++
T Consensus 343 ~~~l~~FL~ 351 (351)
T TIGR01392 343 EELIRGFLR 351 (351)
T ss_pred HHHHHHHhC
Confidence 999999984
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=95.85 E-value=0.022 Score=50.83 Aligned_cols=63 Identities=13% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcH--
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS-- 295 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~-- 295 (320)
-..+|||..|+.|.+||....+.+.+.+. .+ -++.++.++||++..++|+
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~---------------------------~~-~~~~~~~~~gH~~~~e~~~~~ 259 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHAN---------------------------CN-REIKIYEGAKHHLHKETDEVK 259 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHcc---------------------------CC-ceEEEeCCCcccccCCchhHH
Confidence 36899999999999999998888776331 11 5677889999999999984
Q ss_pred -HHHHHHHHHhcCC
Q 020909 296 -RALHLFSSFVHGR 308 (320)
Q Consensus 296 -~a~~m~~~fl~~~ 308 (320)
++++-+.+||.+.
T Consensus 260 ~~~~~~~~~~l~~~ 273 (276)
T PHA02857 260 KSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHHHHh
Confidence 4566666788764
No 26
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=95.84 E-value=0.019 Score=51.37 Aligned_cols=66 Identities=20% Similarity=0.374 Sum_probs=49.7
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++|||..|+.|-++|....+...+.+ .+ .+++++. +|||.+.++|++..
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~----------------------------~~-~~~~~i~-~gH~~~~e~p~~~~ 256 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRI----------------------------PN-AELHIID-DGHLFLITRAEAVA 256 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhC----------------------------CC-CEEEEEc-CCCchhhccHHHHH
Confidence 689999999999999887665544311 11 4555665 59999999999999
Q ss_pred HHHHHHhcCCCCCCCC
Q 020909 299 HLFSSFVHGRRLPNNT 314 (320)
Q Consensus 299 ~m~~~fl~~~~~~~~~ 314 (320)
+.+.+|+.+..-..-|
T Consensus 257 ~~i~~fl~~~~~~~~~ 272 (276)
T TIGR02240 257 PIIMKFLAEERQRAVM 272 (276)
T ss_pred HHHHHHHHHhhhhccC
Confidence 9999999875443333
No 27
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=95.81 E-value=0.017 Score=52.12 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=48.0
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++|||..|..|.++|....++ +.++ . .+ ..++.+.+|||+++.++|++..
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~-~~~~------~---------------------~~-~~~~~i~~~gH~~~~e~p~~~~ 284 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRA-YANF------D---------------------AV-EDFIVLPGVGHCPQDEAPELVN 284 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHH-HHhc------C---------------------Cc-cceEEeCCCCCChhhhCHHHHH
Confidence 7899999999999998765544 3211 0 11 5667889999999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+.+.+|+.+
T Consensus 285 ~~i~~fl~~ 293 (294)
T PLN02824 285 PLIESFVAR 293 (294)
T ss_pred HHHHHHHhc
Confidence 999999964
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.63 E-value=0.013 Score=54.37 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=49.1
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCccCCcHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~~a 297 (320)
..++||..|+.|.++|....+.+.+.+. .+ -.+++|.+ |||+++.++|++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~---------------------------p~-a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG---------------------------PR-GSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC---------------------------CC-CeEEEEeCCccHHHHhcCHHHH
Confidence 6799999999999999877666655220 12 45677774 9999999999999
Q ss_pred HHHHHHHhcC
Q 020909 298 LHLFSSFVHG 307 (320)
Q Consensus 298 ~~m~~~fl~~ 307 (320)
..++..||..
T Consensus 329 ~~~l~~FL~~ 338 (343)
T PRK08775 329 DAILTTALRS 338 (343)
T ss_pred HHHHHHHHHh
Confidence 9999999964
No 29
>PLN02965 Probable pheophorbidase
Probab=95.59 E-value=0.024 Score=50.12 Aligned_cols=60 Identities=8% Similarity=0.176 Sum_probs=47.8
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
-.+++|+..|..|.++|....++..+.+ .+ -.++.+.+|||++...+|++.
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~----------------------------~~-a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENW----------------------------PP-AQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhC----------------------------Cc-ceEEEecCCCCchhhcCHHHH
Confidence 3789999999999999886554444311 12 456778899999999999999
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
..++.+|+.
T Consensus 243 ~~~l~~~~~ 251 (255)
T PLN02965 243 FQYLLQAVS 251 (255)
T ss_pred HHHHHHHHH
Confidence 999999975
No 30
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.41 E-value=0.029 Score=51.85 Aligned_cols=60 Identities=30% Similarity=0.511 Sum_probs=49.3
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
+.+|||..|+.|.++|....+...+ + ..| ..+..|.+|||.+..++|++..
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~----~------------------------~pn-~~~~~I~~~gH~~h~e~Pe~~~ 314 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKK----K------------------------LPN-AELVEIPGAGHLPHLERPEEVA 314 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHh----h------------------------CCC-ceEEEeCCCCcccccCCHHHHH
Confidence 4789999999999999884333332 1 123 8899999999999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
..+..|+..
T Consensus 315 ~~i~~Fi~~ 323 (326)
T KOG1454|consen 315 ALLRSFIAR 323 (326)
T ss_pred HHHHHHHHH
Confidence 999999964
No 31
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.28 E-value=0.049 Score=51.40 Aligned_cols=65 Identities=17% Similarity=0.183 Sum_probs=51.5
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEc-CCcccCccCCcHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVPYAQPSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~-~AGHmvP~dqP~~a 297 (320)
..++||..|+.|.++|....++..+.+... . .. .+++.|. ++||+.+.++|++.
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~a------~------------------~~-~~l~~i~~~~GH~~~le~p~~~ 363 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLAA------G------------------AD-VSYAEIDSPYGHDAFLLDDPRY 363 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHhc------C------------------CC-eEEEEeCCCCCchhHhcCHHHH
Confidence 689999999999999988777666544210 0 11 5677775 89999999999999
Q ss_pred HHHHHHHhcCC
Q 020909 298 LHLFSSFVHGR 308 (320)
Q Consensus 298 ~~m~~~fl~~~ 308 (320)
.+.+.+|+...
T Consensus 364 ~~~L~~FL~~~ 374 (379)
T PRK00175 364 GRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHhh
Confidence 99999999753
No 32
>PLN02578 hydrolase
Probab=95.22 E-value=0.052 Score=50.70 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=45.3
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++||+.+|+.|.+|+....+.+.+.+ .+ -.++.+ ++||+.+.++|++..
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~----------------------------p~-a~l~~i-~~GH~~~~e~p~~~~ 345 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFY----------------------------PD-TTLVNL-QAGHCPHDEVPEQVN 345 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEe-CCCCCccccCHHHHH
Confidence 789999999999988876554433210 12 445556 699999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+.+..|+.+
T Consensus 346 ~~I~~fl~~ 354 (354)
T PLN02578 346 KALLEWLSS 354 (354)
T ss_pred HHHHHHHhC
Confidence 999999853
No 33
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=95.14 E-value=0.059 Score=52.48 Aligned_cols=67 Identities=12% Similarity=0.178 Sum_probs=51.8
Q ss_pred HHHHHh-CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCc
Q 020909 212 LKRIIQ-NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 290 (320)
Q Consensus 212 ~~~LL~-~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP 290 (320)
++.+++ -.++|||..|+.|.++|....+...+.+ .+ -.++.+.+|||+.+
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i----------------------------P~-a~l~vI~~aGH~~~ 460 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV----------------------------PR-ARVKVIDDKDHITI 460 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEeCCCCCcch
Confidence 445553 3789999999999999988776654411 11 45678999999999
Q ss_pred c-CCcHHHHHHHHHHhcC
Q 020909 291 Y-AQPSRALHLFSSFVHG 307 (320)
Q Consensus 291 ~-dqP~~a~~m~~~fl~~ 307 (320)
. ++|+...+.+..|...
T Consensus 461 v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 461 VVGRQKEFARELEEIWRR 478 (481)
T ss_pred hhcCHHHHHHHHHHHhhc
Confidence 6 8999999999999854
No 34
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=95.02 E-value=0.041 Score=51.22 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=48.9
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH--
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR-- 296 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~-- 296 (320)
.+++||.+|..|.+|+....+.+.+.+. . .+ -++..+.++||+...++|++
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~--------~------------------~~-~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKAS--------S------------------SD-KKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcC--------C------------------CC-ceEEEeCCCeeecccCCChhhH
Confidence 6899999999999999877766555220 0 12 56677899999999999987
Q ss_pred --HHHHHHHHhcCC
Q 020909 297 --ALHLFSSFVHGR 308 (320)
Q Consensus 297 --a~~m~~~fl~~~ 308 (320)
++..+.+||...
T Consensus 332 ~~v~~~i~~wL~~~ 345 (349)
T PLN02385 332 FQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHHHHh
Confidence 777788898754
No 35
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=94.92 E-value=0.1 Score=49.49 Aligned_cols=65 Identities=12% Similarity=0.064 Sum_probs=51.4
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcC-CcccCccCCcHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRG-AAHMVPYAQPSR 296 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~-AGHmvP~dqP~~ 296 (320)
-..+||+..|+.|.++|..-.++..+.+... . .+ .++..|.+ +||+.+.++|+.
T Consensus 322 I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~------~------------------~~-a~l~~I~s~~GH~~~le~p~~ 376 (389)
T PRK06765 322 IEANVLMIPCKQDLLQPPRYNYKMVDILQKQ------G------------------KY-AEVYEIESINGHMAGVFDIHL 376 (389)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHHhhhc------C------------------CC-eEEEEECCCCCcchhhcCHHH
Confidence 3789999999999999987766655533100 0 13 77888985 999999999999
Q ss_pred HHHHHHHHhcC
Q 020909 297 ALHLFSSFVHG 307 (320)
Q Consensus 297 a~~m~~~fl~~ 307 (320)
....+.+|+..
T Consensus 377 ~~~~I~~FL~~ 387 (389)
T PRK06765 377 FEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHcc
Confidence 99999999975
No 36
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.88 E-value=0.1 Score=39.55 Aligned_cols=65 Identities=28% Similarity=0.417 Sum_probs=51.4
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+||+.+|..|.++|+.+.+...+.| ++ =..+++.|+||-+-...-.-+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l----------------------------~~-s~lvt~~g~gHg~~~~~s~C~~ 84 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL----------------------------PG-SRLVTVDGAGHGVYAGGSPCVD 84 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC----------------------------CC-ceEEEEeccCcceecCCChHHH
Confidence 489999999999999999998888743 12 3468899999999854445667
Q ss_pred HHHHHHhcCCCCCC
Q 020909 299 HLFSSFVHGRRLPN 312 (320)
Q Consensus 299 ~m~~~fl~~~~~~~ 312 (320)
+++.+|+....+|.
T Consensus 85 ~~v~~yl~~G~lP~ 98 (103)
T PF08386_consen 85 KAVDDYLLDGTLPA 98 (103)
T ss_pred HHHHHHHHcCCCCC
Confidence 88888888777764
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=94.65 E-value=0.098 Score=48.29 Aligned_cols=68 Identities=15% Similarity=0.188 Sum_probs=49.6
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCc---H
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP---S 295 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP---~ 295 (320)
.++|||.+|..|.+++..+++.+.+.+...... ..+ -.++.+.||||++..++| +
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~---------------------~~~-~~l~~~~gagH~~~~E~~~~r~ 316 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHP---------------------CEG-GKPLVIKGAYHEILFEKDAMRS 316 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC---------------------CCC-ceEEEeCCCcchhhhCCcHHHH
Confidence 689999999999999999988887755311100 012 567889999999999887 4
Q ss_pred HHHHHHHHHhcCC
Q 020909 296 RALHLFSSFVHGR 308 (320)
Q Consensus 296 ~a~~m~~~fl~~~ 308 (320)
.+++-+..||...
T Consensus 317 ~v~~~i~~fl~~~ 329 (330)
T PRK10749 317 VALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHhhc
Confidence 4555566677643
No 38
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=94.49 E-value=0.064 Score=45.03 Aligned_cols=54 Identities=31% Similarity=0.528 Sum_probs=39.4
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
.-+.+|++..|+.|.+++ ...++.+... ..+ ..++++.++||+++.++|++
T Consensus 174 ~~~~pvl~i~g~~D~~~~----~~~~~~~~~~------------------------~~~-~~~~~~~~~gH~~~~~~p~~ 224 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVP----PESAEELADK------------------------LPN-AELVVIPGAGHFLFLEQPDE 224 (228)
T ss_dssp GSSSEEEEEEETTSSSSH----HHHHHHHHHH------------------------STT-EEEEEETTSSSTHHHHSHHH
T ss_pred ccCCCeEEeecCCCCCCC----HHHHHHHHHH------------------------CCC-CEEEEECCCCCccHHHCHHH
Confidence 347999999999999999 3333333111 023 67788999999999999987
Q ss_pred HHH
Q 020909 297 ALH 299 (320)
Q Consensus 297 a~~ 299 (320)
..+
T Consensus 225 ~~~ 227 (228)
T PF12697_consen 225 VAE 227 (228)
T ss_dssp HHH
T ss_pred Hhc
Confidence 643
No 39
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=94.46 E-value=0.11 Score=47.79 Aligned_cols=63 Identities=25% Similarity=0.328 Sum_probs=48.1
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH--
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR-- 296 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~-- 296 (320)
.++|||.+|+.|.+||....+.+.+.+. . .+ -++..+.|+||++..++|..
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~--------~------------------~~-~~l~~~~~a~H~~~~e~pd~~~ 303 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAK--------S------------------ED-KTIKIYDGMMHSLLFGEPDENI 303 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhc--------c------------------CC-ceEEEcCCcEeeeecCCCHHHH
Confidence 6899999999999999988877766431 0 12 56677889999999999854
Q ss_pred --HHHHHHHHhcCC
Q 020909 297 --ALHLFSSFVHGR 308 (320)
Q Consensus 297 --a~~m~~~fl~~~ 308 (320)
....+.+||...
T Consensus 304 ~~~~~~i~~fl~~~ 317 (330)
T PLN02298 304 EIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHHHHHHh
Confidence 555666787654
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=94.28 E-value=0.08 Score=50.43 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=42.3
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++||+..|+.|.+++ ...+++.+.+ . .. -.++.|.+|||+++.|+|+...
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~----~-----------------------~~-~~~~~i~~aGH~~~~E~P~~f~ 375 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRM----K-----------------------VP-CEIIRVPQGGHFVFLDNPSGFH 375 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHc----C-----------------------CC-CcEEEeCCCCCeeeccCHHHHH
Confidence 6899999999998765 3333332211 0 11 4567899999999999999977
Q ss_pred HHHHHHhc
Q 020909 299 HLFSSFVH 306 (320)
Q Consensus 299 ~m~~~fl~ 306 (320)
+++.+|+.
T Consensus 376 ~~l~~~~~ 383 (402)
T PLN02894 376 SAVLYACR 383 (402)
T ss_pred HHHHHHHH
Confidence 77776665
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=94.26 E-value=0.1 Score=48.54 Aligned_cols=59 Identities=25% Similarity=0.419 Sum_probs=46.7
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
+-.++||+.+|+.|.+||.... +.+ +++ .++..+.++||+...++|+.
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~----~~l---------------------------~~~-~~~~~~~~~gH~~~~e~p~~ 359 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHA----QGL---------------------------PDG-VAVHVLPGAGHMPQMEAAAD 359 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHH----hhc---------------------------cCC-CeEEEeCCCCCChhhhCHHH
Confidence 3478999999999999875421 100 123 77788999999999999999
Q ss_pred HHHHHHHHhcC
Q 020909 297 ALHLFSSFVHG 307 (320)
Q Consensus 297 a~~m~~~fl~~ 307 (320)
..+.+..|+++
T Consensus 360 ~~~~i~~fl~~ 370 (371)
T PRK14875 360 VNRLLAEFLGK 370 (371)
T ss_pred HHHHHHHHhcc
Confidence 99999999964
No 42
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=93.80 E-value=0.15 Score=44.12 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=27.7
Q ss_pred eEEEEEcCCcccCccCCcHHHHHHHHHHhc
Q 020909 277 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 306 (320)
Q Consensus 277 Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 306 (320)
..++.|.++||+++.++|++..+.+..|+.
T Consensus 211 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 211 LPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred CeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 677889999999999999999999999985
No 43
>PRK06489 hypothetical protein; Provisional
Probab=93.66 E-value=0.2 Score=46.86 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=45.0
Q ss_pred CccEEEEecCCCcccCcccHH-HHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCC----cccCccCC
Q 020909 219 GIPVWVFSGDQDSVVPLLGSR-TLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGA----AHMVPYAQ 293 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~-~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~A----GHmvP~dq 293 (320)
..+|||.+|+.|.++|....+ +++.+. . .+ -.+++|.+| ||++. ++
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~-----i----------------------p~-a~l~~i~~a~~~~GH~~~-e~ 342 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKR-----V----------------------KH-GRLVLIPASPETRGHGTT-GS 342 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHh-----C----------------------cC-CeEEEECCCCCCCCcccc-cC
Confidence 689999999999999876541 222211 0 12 566888886 99986 89
Q ss_pred cHHHHHHHHHHhcC
Q 020909 294 PSRALHLFSSFVHG 307 (320)
Q Consensus 294 P~~a~~m~~~fl~~ 307 (320)
|++..+.+.+|+..
T Consensus 343 P~~~~~~i~~FL~~ 356 (360)
T PRK06489 343 AKFWKAYLAEFLAQ 356 (360)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999964
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=93.29 E-value=0.17 Score=43.10 Aligned_cols=59 Identities=24% Similarity=0.415 Sum_probs=42.8
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
-..+||+.+|..|..++- ..+.+. +...+ .+++++.++||+++.++|++.
T Consensus 193 ~~~P~l~i~g~~D~~~~~-----~~~~~~------------------------~~~~~-~~~~~~~~~gH~~~~e~~~~~ 242 (251)
T TIGR03695 193 LTIPVLYLCGEKDEKFVQ-----IAKEMQ------------------------KLLPN-LTLVIIANAGHNIHLENPEAF 242 (251)
T ss_pred CCCceEEEeeCcchHHHH-----HHHHHH------------------------hcCCC-CcEEEEcCCCCCcCccChHHH
Confidence 468999999999965421 111111 00123 677788999999999999999
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
.+.+..|++
T Consensus 243 ~~~i~~~l~ 251 (251)
T TIGR03695 243 AKILLAFLE 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999984
No 45
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=92.73 E-value=0.27 Score=42.03 Aligned_cols=49 Identities=22% Similarity=0.306 Sum_probs=38.6
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCcc
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 291 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~ 291 (320)
...+|||.+|+.|.+||...+..+.+.|... + .. ..+++..++||-...
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g-----------------------~~-~~~~~~p~~gH~~~~ 191 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-G-----------------------KP-VELLIFPGEGHGFGN 191 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-T-----------------------SS-EEEEEETT-SSSTTS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-C-----------------------CC-EEEEEcCcCCCCCCC
Confidence 3679999999999999999999999988511 1 12 788899999996553
No 46
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=92.48 E-value=0.21 Score=47.47 Aligned_cols=63 Identities=21% Similarity=0.260 Sum_probs=49.2
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccC-CcHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYA-QPSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~d-qP~~a 297 (320)
++++||.+|+.|.++|...++.+.+++. .+ . =++..+.|++|++..+ .|+.+
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~--------~~------------------~-k~l~~~~ga~H~l~~e~~~e~v 376 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAA--------SR------------------H-KDIKLYDGFLHDLLFEPEREEV 376 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcC--------CC------------------C-ceEEEECCCeEEeccCCCHHHH
Confidence 6899999999999999999988877331 00 0 2234568899999776 79999
Q ss_pred HHHHHHHhcCC
Q 020909 298 LHLFSSFVHGR 308 (320)
Q Consensus 298 ~~m~~~fl~~~ 308 (320)
++.+..||.+.
T Consensus 377 ~~~I~~FL~~~ 387 (395)
T PLN02652 377 GRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHH
Confidence 99999999753
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=92.18 E-value=0.37 Score=44.62 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=47.6
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCC-cHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ-PSRA 297 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dq-P~~a 297 (320)
.+++|+.+|+.|.+++..+++.+.+++ .. .+ -++..+.|++|++..+. ++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~----~~----------------------~~-~~l~~~~g~~H~i~~E~~~~~v 322 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKL----SI----------------------SN-KELHTLEDMDHVITIEPGNEEV 322 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhc----cC----------------------CC-cEEEEECCCCCCCccCCCHHHH
Confidence 689999999999999998888776532 10 11 45566788999999875 5778
Q ss_pred HHHHHHHhcC
Q 020909 298 LHLFSSFVHG 307 (320)
Q Consensus 298 ~~m~~~fl~~ 307 (320)
++-+..||.+
T Consensus 323 ~~~i~~wL~~ 332 (332)
T TIGR01607 323 LKKIIEWISN 332 (332)
T ss_pred HHHHHHHhhC
Confidence 8888889854
No 48
>PRK11460 putative hydrolase; Provisional
Probab=91.83 E-value=0.44 Score=41.70 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
.+.+||+.+|..|.++|..-++...+.|+.. + .+ .++.+..++||.++.+.-+.+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~-g-----------------------~~-~~~~~~~~~gH~i~~~~~~~~ 201 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISL-G-----------------------GD-VTLDIVEDLGHAIDPRLMQFA 201 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHC-C-----------------------CC-eEEEEECCCCCCCCHHHHHHH
Confidence 4689999999999999999998888866311 1 12 677788999999986656666
Q ss_pred HHHHHHHh
Q 020909 298 LHLFSSFV 305 (320)
Q Consensus 298 ~~m~~~fl 305 (320)
.+.|.+++
T Consensus 202 ~~~l~~~l 209 (232)
T PRK11460 202 LDRLRYTV 209 (232)
T ss_pred HHHHHHHc
Confidence 66666555
No 49
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=91.31 E-value=0.96 Score=41.09 Aligned_cols=68 Identities=24% Similarity=0.458 Sum_probs=52.0
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeC-CeeEEEEEcCCcccCc--cCCcH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYG-NLLTFVTVRGAAHMVP--YAQPS 295 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~-~~Ltf~~V~~AGHmvP--~dqP~ 295 (320)
+.+|+||+|..|-++|+..+...++++-.. | ..++|.++.+++|+.. ...|
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~-------------------------G~a~V~~~~~~~~~H~~~~~~~~~- 272 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAA-------------------------GGADVEYVRYPGGGHLGAAFASAP- 272 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHc-------------------------CCCCEEEEecCCCChhhhhhcCcH-
Confidence 579999999999999999999888855211 2 1288999999999975 3555
Q ss_pred HHHHHHHHHhcCCCCCC
Q 020909 296 RALHLFSSFVHGRRLPN 312 (320)
Q Consensus 296 ~a~~m~~~fl~~~~~~~ 312 (320)
.++..++.-+.|++.++
T Consensus 273 ~a~~Wl~~rf~G~~~~~ 289 (290)
T PF03583_consen 273 DALAWLDDRFAGKPATS 289 (290)
T ss_pred HHHHHHHHHHCCCCCCC
Confidence 55666666777887755
No 50
>PLN02511 hydrolase
Probab=91.23 E-value=0.23 Score=47.11 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=48.9
Q ss_pred CCccEEEEecCCCcccCcccHHH-HHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRT-LIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~-~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
-.+++||.+|+.|.++|...... .++ ...+ ..++++.++||+...++|..
T Consensus 297 I~vPtLiI~g~dDpi~p~~~~~~~~~~----------------------------~~p~-~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 297 VRVPLLCIQAANDPIAPARGIPREDIK----------------------------ANPN-CLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred CCCCeEEEEcCCCCcCCcccCcHhHHh----------------------------cCCC-EEEEECCCcceeccccCCCC
Confidence 36899999999999998754321 111 1134 78899999999999999865
Q ss_pred ------HHHHHHHHhcCCCCCCCCCCCC
Q 020909 297 ------ALHLFSSFVHGRRLPNNTRPAI 318 (320)
Q Consensus 297 ------a~~m~~~fl~~~~~~~~~~~~~ 318 (320)
+.+.+.+|+....-.....|||
T Consensus 348 ~~~~~w~~~~i~~Fl~~~~~~~~~~~~~ 375 (388)
T PLN02511 348 PFGAPWTDPVVMEFLEALEEGKSSTPAF 375 (388)
T ss_pred CCCCccHHHHHHHHHHHHHHhccccccc
Confidence 3566666775433333444554
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=90.80 E-value=0.41 Score=40.61 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=45.2
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
-.+++|+.+|..|.++|....+...+.+ .+ -.++.+.++||....+.|+..
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~GH~~~~~~~~~~ 224 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLI----------------------------PN-SQLVLIEGSGHFAFLEGPDEF 224 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHS----------------------------TT-EEEEEETTCCSTHHHHSHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhc----------------------------CC-CEEEECCCCChHHHhcCHHhh
Confidence 4789999999999999988776643311 22 667789999999999999998
Q ss_pred HHHHH
Q 020909 298 LHLFS 302 (320)
Q Consensus 298 ~~m~~ 302 (320)
.+++.
T Consensus 225 ~~~i~ 229 (230)
T PF00561_consen 225 NEIII 229 (230)
T ss_dssp HHHHH
T ss_pred hhhhc
Confidence 88875
No 52
>PRK10566 esterase; Provisional
Probab=90.71 E-value=0.53 Score=41.08 Aligned_cols=62 Identities=29% Similarity=0.375 Sum_probs=44.6
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+||+.+|..|.++|...++.+.+.+... +. ..+ +++++..|+||.+. | ..+
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~-g~---------------------~~~-~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRER-GL---------------------DKN-LTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhc-CC---------------------Ccc-eEEEecCCCCCccC---H-HHH
Confidence 468999999999999998888877756311 11 023 88899999999975 3 345
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+-..+||..
T Consensus 239 ~~~~~fl~~ 247 (249)
T PRK10566 239 DAGVAFFRQ 247 (249)
T ss_pred HHHHHHHHh
Confidence 555557753
No 53
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.32 E-value=1.1 Score=41.36 Aligned_cols=71 Identities=20% Similarity=0.301 Sum_probs=49.2
Q ss_pred CcHHHHHHHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCc
Q 020909 207 NILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAA 286 (320)
Q Consensus 207 ~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AG 286 (320)
++.+.+..| +..++|++..|+.|++--..|.+. ...+ .. .. -..+.|.+||
T Consensus 292 Pm~~r~~~l-~~~~pv~fiyG~~dWmD~~~g~~~-~~~~-------~~-------------------~~-~~~~~v~~aG 342 (365)
T KOG4409|consen 292 PMIQRLREL-KKDVPVTFIYGDRDWMDKNAGLEV-TKSL-------MK-------------------EY-VEIIIVPGAG 342 (365)
T ss_pred hHHHHHHhh-ccCCCEEEEecCcccccchhHHHH-HHHh-------hc-------------------cc-ceEEEecCCC
Confidence 445555444 457999999999998755555433 2211 00 11 5678899999
Q ss_pred ccCccCCcHHHHHHHHHHhc
Q 020909 287 HMVPYAQPSRALHLFSSFVH 306 (320)
Q Consensus 287 HmvP~dqP~~a~~m~~~fl~ 306 (320)
|.|-.|+|+.=-+.+..+++
T Consensus 343 HhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 343 HHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred ceeecCCHHHHHHHHHHHHh
Confidence 99999999887777777764
No 54
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=89.12 E-value=0.91 Score=51.06 Aligned_cols=75 Identities=15% Similarity=0.227 Sum_probs=49.3
Q ss_pred hCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHH
Q 020909 217 QNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSR 296 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~ 296 (320)
.-..++|+..|+.|.+++ .-.+++.+.+. - ..+. +.- ..... ..+++|.+|||+++.++|+.
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~----~--a~~~------~~~----~~~~~-a~lvvI~~aGH~~~lE~Pe~ 1627 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIG----K--SKES------GND----KGKEI-IEIVEIPNCGHAVHLENPLP 1627 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHcc----c--cccc------ccc----ccccc-eEEEEECCCCCchHHHCHHH
Confidence 336899999999998775 22233332221 0 0000 000 00122 57889999999999999999
Q ss_pred HHHHHHHHhcCCC
Q 020909 297 ALHLFSSFVHGRR 309 (320)
Q Consensus 297 a~~m~~~fl~~~~ 309 (320)
..+.+.+|+.+..
T Consensus 1628 f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1628 VIRALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998644
No 55
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.24 E-value=2.3 Score=41.51 Aligned_cols=89 Identities=19% Similarity=0.319 Sum_probs=65.3
Q ss_pred cHHHHHHHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcc
Q 020909 208 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAH 287 (320)
Q Consensus 208 ~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGH 287 (320)
.-+.|....++|=|+|+|+|..|.+++..++..+-+++....+-.. ..+-.| +-|..|.|.||
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~----------~~v~dF-------~RlF~vPGm~H 404 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGAL----------ADVDDF-------YRLFMVPGMGH 404 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhccccc----------ccccce-------eEEEecCCCcc
Confidence 3456777778899999999999999999999999998853332210 011111 67788999999
Q ss_pred cC--ccCCcHHHHHHHHHHhcCCCCCCC
Q 020909 288 MV--PYAQPSRALHLFSSFVHGRRLPNN 313 (320)
Q Consensus 288 mv--P~dqP~~a~~m~~~fl~~~~~~~~ 313 (320)
-. |...|-.++.-|.+|+.+..-|+.
T Consensus 405 C~gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 405 CGGGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred cCCCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 85 445677888888889987655543
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=87.86 E-value=0.51 Score=46.68 Aligned_cols=59 Identities=22% Similarity=0.251 Sum_probs=43.7
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..++||.+|+.|.++|....+.+.+ +. .+ ..++++ ++||+.+.+.|++..
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~-------------~~---------------~~-~~~~~~-~~gH~~~~e~p~~~~ 282 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSR-------------WV---------------PR-LWRREI-KAGHWLPMSHPQVLA 282 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccc-------------cC---------------Cc-ceEEEc-cCCCcchhhChhHHH
Confidence 5799999999999999654332211 00 12 444555 479999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+.+..|+..
T Consensus 283 ~~i~~fl~~ 291 (582)
T PRK05855 283 AAVAEFVDA 291 (582)
T ss_pred HHHHHHHHh
Confidence 999999975
No 57
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=87.57 E-value=1.1 Score=38.51 Aligned_cols=59 Identities=24% Similarity=0.428 Sum_probs=40.2
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
+.+|++.+|+.|.++|....+...+.|+.. + .+ ++|.+..|.||-++ .+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~-~-----------------------~~-v~~~~~~g~gH~i~----~~~~ 205 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA-G-----------------------AN-VEFHEYPGGGHEIS----PEEL 205 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT-T------------------------G-EEEEEETT-SSS------HHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc-C-----------------------CC-EEEEEcCCCCCCCC----HHHH
Confidence 679999999999999999888877766311 0 12 88888899999997 3555
Q ss_pred HHHHHHhc
Q 020909 299 HLFSSFVH 306 (320)
Q Consensus 299 ~m~~~fl~ 306 (320)
..+.+||.
T Consensus 206 ~~~~~~l~ 213 (216)
T PF02230_consen 206 RDLREFLE 213 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666764
No 58
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=85.97 E-value=1.7 Score=38.97 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=46.8
Q ss_pred HHHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccC-cc
Q 020909 213 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV-PY 291 (320)
Q Consensus 213 ~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmv-P~ 291 (320)
+.|.+-+.++|+..|+.|.. ...+.+.+... .. |.. .+ ...+ .+++++.+|||.+ +.
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~-----~~~~~~~~~~~------~~---~~~--~l-----~~~~-v~~~~~~~~~H~l~~e 258 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLT-----AQEFADSVLGE------PA---WRG--AL-----EDPG-IERVEIDGADHTFSDR 258 (274)
T ss_pred HHHHhcCCcEEEEEcCcchh-----HHHHHHHhccC------hh---hHH--Hh-----hcCC-eEEEecCCCCcccccH
Confidence 44445589999999999986 23444322100 00 100 00 1134 8899999999999 56
Q ss_pred CCcHHHHHHHHHHhc
Q 020909 292 AQPSRALHLFSSFVH 306 (320)
Q Consensus 292 dqP~~a~~m~~~fl~ 306 (320)
+.|+...+.+.+||.
T Consensus 259 ~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 259 VWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHHHHHHHHHh
Confidence 666899999999985
No 59
>COG0400 Predicted esterase [General function prediction only]
Probab=84.63 E-value=2.3 Score=36.65 Aligned_cols=60 Identities=23% Similarity=0.341 Sum_probs=42.5
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
++.+|++.+|..|.+||..-+++..+.|.. .+. + ..+.++. .||.+|.. .
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~-~g~-----------------------~-v~~~~~~-~GH~i~~e----~ 194 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTA-SGA-----------------------D-VEVRWHE-GGHEIPPE----E 194 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHH-cCC-----------------------C-EEEEEec-CCCcCCHH----H
Confidence 489999999999999999999988886642 121 1 4555555 99999853 3
Q ss_pred HHHHHHHhcC
Q 020909 298 LHLFSSFVHG 307 (320)
Q Consensus 298 ~~m~~~fl~~ 307 (320)
++.+++|+.+
T Consensus 195 ~~~~~~wl~~ 204 (207)
T COG0400 195 LEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHh
Confidence 4444446643
No 60
>PLN02872 triacylglycerol lipase
Probab=83.83 E-value=2.1 Score=40.72 Aligned_cols=61 Identities=13% Similarity=0.313 Sum_probs=45.8
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCccc---CccCCcH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHM---VPYAQPS 295 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHm---vP~dqP~ 295 (320)
+++|+|+.|..|.+++....+++.+.+. - . -.+..+.++||+ ...+.|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp----~--~----------------------~~l~~l~~~gH~dfi~~~eape 376 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELP----S--K----------------------PELLYLENYGHIDFLLSTSAKE 376 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCC----C--c----------------------cEEEEcCCCCCHHHHhCcchHH
Confidence 6899999999999999888877776431 0 0 123446789996 3558899
Q ss_pred HHHHHHHHHhcC
Q 020909 296 RALHLFSSFVHG 307 (320)
Q Consensus 296 ~a~~m~~~fl~~ 307 (320)
..++-+..|+..
T Consensus 377 ~V~~~Il~fL~~ 388 (395)
T PLN02872 377 DVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHHHHHHH
Confidence 888888889863
No 61
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=83.76 E-value=0.91 Score=41.42 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=26.4
Q ss_pred eEEEEEcCCcccCccCCcHHHHHHHHHHhc
Q 020909 277 LTFVTVRGAAHMVPYAQPSRALHLFSSFVH 306 (320)
Q Consensus 277 Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 306 (320)
.-+..+.+|||+|..|+|+..++.+..|+.
T Consensus 282 ~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 282 VEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred hheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 556677789999999999999999999885
No 62
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=82.30 E-value=3 Score=37.32 Aligned_cols=59 Identities=15% Similarity=0.176 Sum_probs=45.5
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.+++++..|..|.++|..-.+++++.+ + + -.++++. +||+....+|+...
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~----------~-----------------~--~~~~~l~-~gH~p~ls~P~~~~ 260 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRW----------P-----------------P--SQVYELE-SDHSPFFSTPFLLF 260 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhC----------C-----------------c--cEEEEEC-CCCCccccCHHHHH
Confidence 679999999999999987666666522 0 1 2345564 89999999999999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
.++..+...
T Consensus 261 ~~i~~~a~~ 269 (273)
T PLN02211 261 GLLIKAAAS 269 (273)
T ss_pred HHHHHHHHH
Confidence 999887643
No 63
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=82.21 E-value=5 Score=36.38 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=35.8
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.+++||.+|+.|.+||...++.+.+.+ .+ -.++++.++||+.. .|+...
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~----------------------------~~-~~~~~~~~~gH~~~--~~~~~~ 296 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF----------------------------PE-AELKVTNNAGHSAF--DPNNLA 296 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CEEEEECCCCCCCC--ChHHHH
Confidence 589999999999999997665554421 12 55677889999974 444433
Q ss_pred HH
Q 020909 299 HL 300 (320)
Q Consensus 299 ~m 300 (320)
++
T Consensus 297 ~i 298 (306)
T TIGR01249 297 AL 298 (306)
T ss_pred HH
Confidence 33
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=80.99 E-value=2.5 Score=33.05 Aligned_cols=32 Identities=31% Similarity=0.497 Sum_probs=24.0
Q ss_pred HHHhCCccEEEEecCCCcccCcccHHHHHHHH
Q 020909 214 RIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 245 (320)
Q Consensus 214 ~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l 245 (320)
.+-...++|++..|..|.+++....+.+.+.+
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~ 130 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEAL 130 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHH
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHc
Confidence 33355789999999999999887777766644
No 65
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=79.63 E-value=5.1 Score=40.53 Aligned_cols=60 Identities=18% Similarity=0.387 Sum_probs=45.8
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.-++||.+|..|..|+..-++++.+.|+. .+. + .-+++.++.||-.+. |+...
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g~-----------------------~-~~~~~~p~e~H~~~~--~~~~~ 603 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGK-----------------------P-VELVVFPDEGHGFSR--PENRV 603 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHH-cCc-----------------------e-EEEEEeCCCCcCCCC--chhHH
Confidence 45899999999999999999999998852 121 1 667888999999987 65555
Q ss_pred HHHHHHh
Q 020909 299 HLFSSFV 305 (320)
Q Consensus 299 ~m~~~fl 305 (320)
++++.++
T Consensus 604 ~~~~~~~ 610 (620)
T COG1506 604 KVLKEIL 610 (620)
T ss_pred HHHHHHH
Confidence 5544443
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=79.08 E-value=4.6 Score=33.88 Aligned_cols=62 Identities=26% Similarity=0.464 Sum_probs=42.5
Q ss_pred HhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcH
Q 020909 216 IQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 295 (320)
Q Consensus 216 L~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~ 295 (320)
.....++|+..|+.|.+.+......+.+.+ + + . ..++++.++||+...++|+
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~----------~-----------~------~-~~~~~~~~~gH~~~~~~p~ 269 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAAL----------P-----------N------D-ARLVVIPGAGHFPHLEAPE 269 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhC----------C-----------C------C-ceEEEeCCCCCcchhhcHH
Confidence 344799999999999555544322222211 0 0 2 7788899999999999999
Q ss_pred HHHHHHHHHh
Q 020909 296 RALHLFSSFV 305 (320)
Q Consensus 296 ~a~~m~~~fl 305 (320)
...+.+..++
T Consensus 270 ~~~~~i~~~~ 279 (282)
T COG0596 270 AFAAALLAFL 279 (282)
T ss_pred HHHHHHHHHH
Confidence 7776666644
No 67
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=76.25 E-value=5.5 Score=36.92 Aligned_cols=62 Identities=15% Similarity=0.237 Sum_probs=43.6
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCc---
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--- 294 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP--- 294 (320)
-..+||+..|..|.++|...++.+.+.+. . .+ .++.++ .+||+.+.+.|
T Consensus 285 i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--------~------------------~~-~~~~~~-~~gH~~~~~~~~~~ 336 (350)
T TIGR01836 285 IKMPILNIYAERDHLVPPDASKALNDLVS--------S------------------ED-YTELSF-PGGHIGIYVSGKAQ 336 (350)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHHHcC--------C------------------CC-eEEEEc-CCCCEEEEECchhH
Confidence 36899999999999999988877766331 0 11 444444 48999988766
Q ss_pred HHHHHHHHHHhcC
Q 020909 295 SRALHLFSSFVHG 307 (320)
Q Consensus 295 ~~a~~m~~~fl~~ 307 (320)
+.+..-+..||..
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 5566666677753
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=76.17 E-value=7 Score=33.18 Aligned_cols=54 Identities=17% Similarity=0.109 Sum_probs=37.1
Q ss_pred HHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcch
Q 020909 7 NWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVP 70 (320)
Q Consensus 7 ~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~ 70 (320)
+++..-+......+.|.|.||||+-+-.++. +. +-.++.++.++|.+|+.....
T Consensus 53 ~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~----~~------~~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 53 EYLIKQYYIDPDRIGIMGHSYGGYLALLAAT----QH------PDRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp HHHHHTTSEEEEEEEEEEETHHHHHHHHHHH----HT------CCGSSEEEEESE-SSTTCSBH
T ss_pred HHHhccccccceeEEEEcccccccccchhhc----cc------ceeeeeeeccceecchhcccc
Confidence 4444444566788999999999975554443 22 134799999999999876554
No 69
>PRK13604 luxD acyl transferase; Provisional
Probab=75.56 E-value=5.8 Score=36.33 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=43.0
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+||+++|+.|.+||..+++.+.+++. . ++ -.+..+.||+|.... .+...-
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~-------s-------------------~~-kkl~~i~Ga~H~l~~-~~~~~~ 253 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR-------S-------------------EQ-CKLYSLIGSSHDLGE-NLVVLR 253 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc-------c-------------------CC-cEEEEeCCCccccCc-chHHHH
Confidence 5899999999999999999998887431 0 22 677889999999864 454444
Q ss_pred HHHHHH
Q 020909 299 HLFSSF 304 (320)
Q Consensus 299 ~m~~~f 304 (320)
.+.++.
T Consensus 254 ~~~~~~ 259 (307)
T PRK13604 254 NFYQSV 259 (307)
T ss_pred HHHHHH
Confidence 444443
No 70
>PRK10985 putative hydrolase; Provisional
Probab=74.78 E-value=9.5 Score=34.94 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=33.5
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCC
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQ 293 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dq 293 (320)
.+++|+.+|+.|.+++....+.+.+ + ..+ ..++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~-~---------------------------~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPES-L---------------------------PPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHH-h---------------------------CCC-eEEEECCCCCceeeCCC
Confidence 6799999999999998654433211 1 023 77888999999988753
No 71
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.74 E-value=6.4 Score=34.86 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=43.7
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
..+|||++|..|-++|+.-..+..+.. .. . .-..+|+||||--..--| .-+
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~--------k~-------------------~-~epl~v~g~gH~~~~~~~-~yi 242 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERC--------KE-------------------K-VEPLWVKGAGHNDIELYP-EYI 242 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhc--------cc-------------------c-CCCcEEecCCCcccccCH-HHH
Confidence 459999999999999998776655421 11 1 445789999999887555 566
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
+.+++|+..
T Consensus 243 ~~l~~f~~~ 251 (258)
T KOG1552|consen 243 EHLRRFISS 251 (258)
T ss_pred HHHHHHHHH
Confidence 777777753
No 72
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=72.74 E-value=6.3 Score=30.88 Aligned_cols=54 Identities=28% Similarity=0.419 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
.|++..+++| +..+.|+|+|-||-..-.+|..+.+..... ..+++-+..|.|-+
T Consensus 53 ~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~---~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 53 ALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS---SSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS---TTTEEEEEES-S--
T ss_pred HHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc---ccceeeeecCCccc
Confidence 3455555566 578999999999999998988888755321 46788888888876
No 73
>PLN02454 triacylglycerol lipase
Probab=71.73 E-value=7.6 Score=36.99 Aligned_cols=60 Identities=17% Similarity=0.294 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
..++...+++|+.+ ..++|+|+|-||--.-..|..|...... ...++++.+..|.|-+..
T Consensus 214 ~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 214 AKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 44566667777653 3699999999998777777677654221 124567889999887753
No 74
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=71.46 E-value=14 Score=34.28 Aligned_cols=54 Identities=24% Similarity=0.324 Sum_probs=40.6
Q ss_pred HHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 8 WYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 8 F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
|....=++. .++|+|.|=||.-+-.+|.++.+.. ..++.|+|+++--|++....
T Consensus 158 ~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 158 WLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred HHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecccCCCC
Confidence 554443442 3999999999999999999888754 12578999999999886543
No 75
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=70.81 E-value=5.4 Score=32.98 Aligned_cols=49 Identities=20% Similarity=0.268 Sum_probs=35.0
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
.+..+++.... .+++|.|.|+||..+-.++.+ . +-.++|+++-++....
T Consensus 55 ~l~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 55 DLAELLDALGI---KKVILVGHSMGGMIALRLAAR----Y------PDRVKGLVLLSPPPPL 103 (228)
T ss_dssp HHHHHHHHTTT---SSEEEEEETHHHHHHHHHHHH----S------GGGEEEEEEESESSSH
T ss_pred hhhhccccccc---ccccccccccccccccccccc----c------ccccccceeecccccc
Confidence 45566665433 789999999999876666642 2 2268999999888753
No 76
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=70.71 E-value=6.7 Score=37.55 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=38.5
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
.+.+|+...|.....++.|.|.|+||.+++.+|.. . +-.++++++.+|.++
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~----~------p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYL----E------PPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHh----C------CcCceEEEEECCccc
Confidence 45567777787778899999999999988887752 1 125788888877654
No 77
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=68.67 E-value=8.3 Score=36.53 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=38.5
Q ss_pred HHHHHHHHhCCCCCC-CceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCC
Q 020909 3 VFMMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 66 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~-~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~ 66 (320)
.+|..-..+||...+ .|....|-|||| |+..++.+|. +-.+.||+=-++|.-|.
T Consensus 168 NAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 168 NALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 456666678999986 899999999998 6666666553 34567776666666553
No 78
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=65.67 E-value=5.4 Score=33.73 Aligned_cols=38 Identities=26% Similarity=0.487 Sum_probs=28.9
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
...+.|.|-|-||-|.-.+|.+ .+++. ++.||.+.|..
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~------------~~~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAER------------YGLPA-VLINPAVRPYE 95 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHH------------hCCCE-EEEcCCCCHHH
Confidence 3459999999999998888763 34455 67799998854
No 79
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=65.47 E-value=7.9 Score=38.36 Aligned_cols=25 Identities=16% Similarity=0.392 Sum_probs=22.0
Q ss_pred CccEEEEecCCCcccCcccHHHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIR 243 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~ 243 (320)
.+++|+..|..|.++|+..++.+.+
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~ 439 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAA 439 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHH
Confidence 5899999999999999998876655
No 80
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=64.92 E-value=8.9 Score=32.31 Aligned_cols=45 Identities=27% Similarity=0.335 Sum_probs=36.8
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+...+++|+|+|=||+.+-.++..+.+... ..++++++-.|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 556789999999999999988877766431 348999999998876
No 81
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=64.38 E-value=15 Score=33.51 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=48.9
Q ss_pred hCCccEEEEecCCCcccC-cccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCc-
Q 020909 217 QNGIPVWVFSGDQDSVVP-LLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP- 294 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n-~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP- 294 (320)
...++|||.+|..|.++. ..+..++.+++ +. .+ -+++.+.||.|.+-.+.+
T Consensus 226 ~~~~PvLll~g~~D~vv~~~~~~~~~~~~~----~~----------------------~~-~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 226 AIALPVLLLQGGDDRVVDNVEGLARFFERA----GS----------------------PD-KELKVIPGAYHELLNEPDR 278 (298)
T ss_pred cccCCEEEEecCCCccccCcHHHHHHHHhc----CC----------------------CC-ceEEecCCcchhhhcCcch
Confidence 357999999999999999 57777776633 21 12 566778889999987765
Q ss_pred --HHHHHHHHHHhcCC
Q 020909 295 --SRALHLFSSFVHGR 308 (320)
Q Consensus 295 --~~a~~m~~~fl~~~ 308 (320)
+++++.+..|+...
T Consensus 279 ~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 279 AREEVLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 47788888888654
No 82
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=64.35 E-value=4.4 Score=25.57 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=25.5
Q ss_pred CCCCCCCcchhHHHHHHHcCCCChHHHHHHHc
Q 020909 61 PLLRLDQDVPAIYEFFWSHGMISDEIGLTIMS 92 (320)
Q Consensus 61 g~~~p~~q~~~~~~~~~~~gli~~~~~~~~~~ 92 (320)
|.+||.+...-..+=|+..|+||.+....+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 77888887776778899999999999887653
No 83
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=63.87 E-value=7.3 Score=33.81 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=29.7
Q ss_pred CCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 14 EFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 14 ~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
++..++++|.|.|+||..+..+|.. . +-.++++++.++...
T Consensus 92 ~~~~~~~~liG~S~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 92 KLGLDKFYLLGHSWGGMLAQEYALK----Y------GQHLKGLIISSMLDS 132 (288)
T ss_pred HcCCCcEEEEEeehHHHHHHHHHHh----C------ccccceeeEeccccc
Confidence 3445679999999999877776652 1 245789988887653
No 84
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=63.78 E-value=5 Score=34.34 Aligned_cols=49 Identities=14% Similarity=0.122 Sum_probs=33.3
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
.+..|.+. +...+++|.|.|+||..+..+|... +-.++++++-+|+..+
T Consensus 69 ~~~~~i~~---~~~~~~~l~G~S~Gg~~a~~~a~~~----------~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 69 DVLQLLDA---LNIERFHFVGHALGGLIGLQLALRY----------PERLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHH---hCCCcEEEEEechhHHHHHHHHHHC----------hHHhHHheeecCCCCC
Confidence 34455543 3446799999999998777776531 1246888888887654
No 85
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=62.74 E-value=11 Score=31.75 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=27.9
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
..++++|.|+|+||..+..+|.+ + +-.++++++-++..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~----~------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ----Y------PERVQGLILESGSP 105 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh----C------chheeeeEEecCCC
Confidence 45789999999999866666653 2 13578888877754
No 86
>PHA02857 monoglyceride lipase; Provisional
Probab=61.92 E-value=14 Score=32.53 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=28.6
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+...+++|.|.|.||.-+..+|. .. +-+++|+++.+|.+++
T Consensus 94 ~~~~~~~lvG~S~GG~ia~~~a~----~~------p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 94 YPGVPVFLLGHSMGATISILAAY----KN------PNLFTAMILMSPLVNA 134 (276)
T ss_pred CCCCCEEEEEcCchHHHHHHHHH----hC------ccccceEEEecccccc
Confidence 34578999999999964433332 21 2358999999998764
No 87
>PRK10162 acetyl esterase; Provisional
Probab=61.07 E-value=11 Score=34.58 Aligned_cols=46 Identities=20% Similarity=0.066 Sum_probs=33.4
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
....+.|+|+|.||+-.-.++..+-+... ....++|+++..|+++.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 34679999999999988777766644321 12457888888888763
No 88
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=61.03 E-value=16 Score=31.06 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=30.5
Q ss_pred ceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 19 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 19 ~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
|++|+|-|+||.-.=.+|.++.+.. ...+.+++-|+..
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred CeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 9999999999998888888777653 4578888888654
No 89
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=60.10 E-value=8.8 Score=34.88 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=23.1
Q ss_pred CccEEEEecCCCcccCcccHHHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIR 243 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~ 243 (320)
.+++||.+|..|.+|-..+++...+
T Consensus 246 tvPflilHG~dD~VTDp~~Sk~Lye 270 (313)
T KOG1455|consen 246 TVPFLILHGTDDKVTDPKVSKELYE 270 (313)
T ss_pred cccEEEEecCCCcccCcHHHHHHHH
Confidence 6899999999999999999988876
No 90
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=59.85 E-value=13 Score=34.36 Aligned_cols=46 Identities=24% Similarity=0.350 Sum_probs=29.0
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+.|++|.|+|.||--+-.++...-+..... -+..++|+++-.|.+.
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~--~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENN--DKLNIKGCISLSGMIS 186 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccc--cccccceEEEeccceE
Confidence 689999999999975554444332211000 0246899987777764
No 91
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=58.35 E-value=17 Score=32.43 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
.+..+.+... ...+++|.|.||||.-+-.++.. . +-.++++++-++..
T Consensus 75 ~l~~~i~~l~--~~~~v~lvGhS~GG~v~~~~a~~----~------p~~v~~lv~~~~~~ 122 (273)
T PLN02211 75 PLIDFLSSLP--ENEKVILVGHSAGGLSVTQAIHR----F------PKKICLAVYVAATM 122 (273)
T ss_pred HHHHHHHhcC--CCCCEEEEEECchHHHHHHHHHh----C------hhheeEEEEecccc
Confidence 4555555432 24799999999999855555432 1 12467777766654
No 92
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=58.09 E-value=20 Score=30.95 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=33.1
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+.+++++|+|-||-..-.+|..+.+.. ...+++.+..|.|-+.
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCC
Confidence 567999999999998877777776543 1356888999988763
No 93
>PLN02571 triacylglycerol lipase
Probab=58.07 E-value=22 Score=33.94 Aligned_cols=61 Identities=10% Similarity=0.080 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcC----CCCCceeeeEEEEeCCCCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAH----SKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~----~~~~~inLkGi~IGNg~~~ 64 (320)
..++.+.+++|.. ..+++|+|+|-||-..-..|..|....-. .....+++..+..|.|-+.
T Consensus 212 ~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 212 NEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred HHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 3456667777765 45799999999999887778777653111 0112356778888887775
No 94
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=57.94 E-value=10 Score=38.33 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
.++. |+++.|..-...+.|+|-||||- ++..++.+. . .++..+...|.++...
T Consensus 459 ~~~~-~l~~~~~~d~~ri~i~G~SyGGy----mtl~~~~~~------~-~f~a~~~~~~~~~~~~ 511 (620)
T COG1506 459 AAVD-ALVKLPLVDPERIGITGGSYGGY----MTLLAATKT------P-RFKAAVAVAGGVDWLL 511 (620)
T ss_pred HHHH-HHHhCCCcChHHeEEeccChHHH----HHHHHHhcC------c-hhheEEeccCcchhhh
Confidence 4566 88899999889999999999994 444444422 1 4788888888777643
No 95
>PRK03204 haloalkane dehalogenase; Provisional
Probab=57.82 E-value=17 Score=32.46 Aligned_cols=40 Identities=15% Similarity=0.341 Sum_probs=27.5
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+...+++|.|+|+||. +|..+.... +-.++++++.++..-
T Consensus 98 ~~~~~~~lvG~S~Gg~----va~~~a~~~------p~~v~~lvl~~~~~~ 137 (286)
T PRK03204 98 LGLDRYLSMGQDWGGP----ISMAVAVER------ADRVRGVVLGNTWFW 137 (286)
T ss_pred hCCCCEEEEEECccHH----HHHHHHHhC------hhheeEEEEECcccc
Confidence 4456799999999995 444444322 246899999887653
No 96
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=57.78 E-value=26 Score=30.40 Aligned_cols=57 Identities=23% Similarity=0.388 Sum_probs=39.2
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCc--HH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP--SR 296 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP--~~ 296 (320)
..+.|-.-|+.|.+++..-++...+.. .+ ..+..+-+||+||.-.| +.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~----------------------------~~--a~vl~HpggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESF----------------------------KD--ATVLEHPGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhc----------------------------CC--CeEEecCCCccCCCchHHHHH
Confidence 578899999999999998777776521 11 03556779999997664 33
Q ss_pred HHHHHHHHh
Q 020909 297 ALHLFSSFV 305 (320)
Q Consensus 297 a~~m~~~fl 305 (320)
....|+.++
T Consensus 213 i~~fi~~~~ 221 (230)
T KOG2551|consen 213 IADFIQSFL 221 (230)
T ss_pred HHHHHHHHH
Confidence 444454444
No 97
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=55.93 E-value=19 Score=30.99 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=32.9
Q ss_pred HHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 6 MNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 6 ~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
.+|++.+|+...+.+-|.|-|.||-.+-.+|++.- .++.++..||-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-----------~i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-----------QISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-----------SEEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-----------CccEEEEeCCc
Confidence 36888999999999999999999987776666431 56777776664
No 98
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=55.27 E-value=16 Score=31.75 Aligned_cols=48 Identities=15% Similarity=-0.096 Sum_probs=31.7
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+..+.+. +...+++|.|.|+||.-+-.+|. .. +-.++++++.++..++
T Consensus 85 l~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~----~~------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 85 LSALCAA---EGLSPDGVIGHSAGAAIALRLAL----DG------PVTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHH---cCCCCceEEEECccHHHHHHHHH----hC------CcccceEEEEcCcccc
Confidence 4444443 34468899999999975554443 21 2357899999887764
No 99
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=55.02 E-value=25 Score=33.57 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=41.8
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRAL 298 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a~ 298 (320)
.++||+.+|..|.++|....+.+.+.. .+ -.++.+.++ |+. .+|..++
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~----------------------------~~-~~l~~i~~~-~~~--e~~~~~~ 402 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSS----------------------------AD-GKLLEIPFK-PVY--RNFDKAL 402 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEccCC-Ccc--CCHHHHH
Confidence 579999999999999998887554311 11 344666666 333 5899999
Q ss_pred HHHHHHhcC
Q 020909 299 HLFSSFVHG 307 (320)
Q Consensus 299 ~m~~~fl~~ 307 (320)
..+..||..
T Consensus 403 ~~i~~wL~~ 411 (414)
T PRK05077 403 QEISDWLED 411 (414)
T ss_pred HHHHHHHHH
Confidence 999999864
No 100
>PRK10566 esterase; Provisional
Probab=53.00 E-value=16 Score=31.65 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=22.0
Q ss_pred HHHHhCCCCCCCceEEEcccCCceehHHHHH
Q 020909 7 NWYEKFPEFKSRELFLTGESYAGHYIPQLAD 37 (320)
Q Consensus 7 ~F~~~fP~~~~~~~yi~GESYaG~YvP~la~ 37 (320)
.++...+.....+++|.|.|+||...-.++.
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 3444455556688999999999986665543
No 101
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=52.60 E-value=27 Score=27.87 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=29.4
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
...++|+|.|-||.-.-.+|..+.+... .-..+-+..|.|-+
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 5679999999999988888877765431 12345566665554
No 102
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=51.66 E-value=18 Score=34.01 Aligned_cols=46 Identities=20% Similarity=0.324 Sum_probs=36.4
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 66 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~ 66 (320)
...++.+.|+|=||+-+-.+..++.+.++. ... |++++-+||+++.
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~P-k~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPNKL----PYP-KSAILISPWVNLV 238 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcCCC----CCC-ceeEEECCCcCCc
Confidence 346899999999999999999987765532 122 7889999999985
No 103
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=50.98 E-value=22 Score=32.84 Aligned_cols=42 Identities=24% Similarity=0.389 Sum_probs=28.5
Q ss_pred CCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 13 PEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 13 P~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+++...+++|.|+|+||..+-.+| ... +-.++|+++-+|...
T Consensus 157 ~~~~~~~~~LvGhSmGG~val~~a----~~~------p~~v~glVLi~p~~~ 198 (349)
T PLN02385 157 PEFRGLPSFLFGQSMGGAVALKVH----LKQ------PNAWDGAILVAPMCK 198 (349)
T ss_pred cccCCCCEEEEEeccchHHHHHHH----HhC------cchhhheeEeccccc
Confidence 455567899999999996544333 222 124789988888653
No 104
>PRK07868 acyl-CoA synthetase; Validated
Probab=50.84 E-value=25 Score=37.75 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=46.1
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEE-EEEcCCcccCcc---CCc
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTF-VTVRGAAHMVPY---AQP 294 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf-~~V~~AGHmvP~---dqP 294 (320)
..++|+..|..|.++|...++.+.+.+ .+ ..+ ..+.++|||.+. .-|
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i----------------------------~~-a~~~~~~~~~GH~g~~~g~~a~ 347 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAA----------------------------PN-AEVYESLIRAGHFGLVVGSRAA 347 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhC----------------------------CC-CeEEEEeCCCCCEeeeechhhh
Confidence 579999999999999998887776522 11 222 345789999553 456
Q ss_pred HHHHHHHHHHhcCCCCCC
Q 020909 295 SRALHLFSSFVHGRRLPN 312 (320)
Q Consensus 295 ~~a~~m~~~fl~~~~~~~ 312 (320)
+...-.+..||...+=+.
T Consensus 348 ~~~wp~i~~wl~~~~~~~ 365 (994)
T PRK07868 348 QQTWPTVADWVKWLEGDG 365 (994)
T ss_pred hhhChHHHHHHHHhccCC
Confidence 777788888988655433
No 105
>PLN02442 S-formylglutathione hydrolase
Probab=50.83 E-value=64 Score=28.89 Aligned_cols=49 Identities=10% Similarity=0.077 Sum_probs=35.2
Q ss_pred hCCccEEEEecCCCcccCcc-cHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCc
Q 020909 217 QNGIPVWVFSGDQDSVVPLL-GSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVP 290 (320)
Q Consensus 217 ~~~irVLiY~Gd~D~i~n~~-G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP 290 (320)
..+.+||+.+|+.|.+|+.. .++.+.+.++ ..+ .+ .++....|++|-..
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~-~~g-----------------------~~-~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK-EAG-----------------------AP-VTLRLQPGYDHSYF 264 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH-HcC-----------------------CC-eEEEEeCCCCccHH
Confidence 34789999999999999974 4666666553 101 12 77888889999755
No 106
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=50.11 E-value=32 Score=31.29 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=28.5
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+.+.+++|.|.|.||..+-.++. .. +-.++|+++.+++...
T Consensus 131 ~~~~~i~l~GhSmGG~ia~~~a~----~~------p~~v~~lvl~~~~~~~ 171 (330)
T PLN02298 131 FQGLPRFLYGESMGGAICLLIHL----AN------PEGFDGAVLVAPMCKI 171 (330)
T ss_pred CCCCCEEEEEecchhHHHHHHHh----cC------cccceeEEEecccccC
Confidence 44568999999999975543332 11 1258999999987653
No 107
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=49.94 E-value=19 Score=31.00 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=24.5
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHH
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 37 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~ 37 (320)
.++..|++.++ .+|||.|+|+|=|+..+=.|-+
T Consensus 82 ~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 82 AAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHH
Confidence 46677887775 4799999999999875444433
No 108
>PLN02442 S-formylglutathione hydrolase
Probab=49.92 E-value=25 Score=31.61 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=30.6
Q ss_pred CCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCC
Q 020909 12 FPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 66 (320)
Q Consensus 12 fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~ 66 (320)
++.+....++|+|.|+||+-+- .+.... +=.+++++..+|..+|.
T Consensus 137 ~~~~~~~~~~i~G~S~GG~~a~----~~a~~~------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 137 FDQLDTSRASIFGHSMGGHGAL----TIYLKN------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHhcCCCceEEEEEChhHHHHH----HHHHhC------chhEEEEEEECCccCcc
Confidence 3455667799999999996333 333222 12478899999998864
No 109
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=48.27 E-value=9.1 Score=36.46 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=39.0
Q ss_pred hHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 2 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 2 ~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
++.+.+|+..-|+.-...+.++|-|+||.|++.+|.. + .-.|||++.-.|.++
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l--e--------~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL--E--------DPRLKAVVALGAPVH 297 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH--T--------TTT-SEEEEES---S
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh--c--------ccceeeEeeeCchHh
Confidence 4667788889999999999999999999999988851 1 135788766666554
No 110
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=46.56 E-value=40 Score=32.16 Aligned_cols=45 Identities=29% Similarity=0.410 Sum_probs=32.3
Q ss_pred HHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 9 YEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 9 ~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
-++|| .+++|.+|.|+||. .+..++-+..++ .-=..|++|-|||-
T Consensus 192 ~~~~P---~a~l~avG~S~Gg~---iL~nYLGE~g~~----~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 192 KKRYP---QAPLFAVGFSMGGN---ILTNYLGEEGDN----TPLIAAVAVCNPWD 236 (409)
T ss_pred HHhCC---CCceEEEEecchHH---HHHHHhhhccCC----CCceeEEEEeccch
Confidence 34677 56999999999996 456666665443 23468899999984
No 111
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=46.25 E-value=22 Score=31.42 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=28.1
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+.-.+++|.|.|+||.-+=.+| ... +-.++|+++.|+...
T Consensus 88 l~~~~~~LvG~S~GG~va~~~a----~~~------p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 88 LDYGQVNAIGVSWGGALAQQFA----HDY------PERCKKLILAATAAG 127 (276)
T ss_pred hCcCceEEEEECHHHHHHHHHH----HHC------HHHhhheEEeccCCc
Confidence 3446899999999997444444 332 235899999988764
No 112
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=45.95 E-value=10 Score=34.21 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=28.5
Q ss_pred eEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 277 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 277 Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
=|++.|.++|=||-.+||....+-|+-|++|..+
T Consensus 248 ttllkv~dcGglV~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 248 TTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp EEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ceEEEecccCCcccccCcHHHHHHHHHHHccCCc
Confidence 7899999999999999999999999999998654
No 113
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=45.93 E-value=7.7 Score=24.14 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=14.5
Q ss_pred hhhhccCchHHHHHhCC
Q 020909 165 ERFFYLNLPEVQKALHA 181 (320)
Q Consensus 165 ~~~~ylN~~~V~~aL~v 181 (320)
.+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 46677999999999985
No 114
>PLN02719 triacylglycerol lipase
Probab=43.52 E-value=46 Score=32.70 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCCCC--CCceEEEcccCCceehHHHHHHHHHhhcC--CCCCceeeeEEEEeCCCCC
Q 020909 3 VFMMNWYEKFPEFK--SRELFLTGESYAGHYIPQLADVLLDHNAH--SKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 3 ~fL~~F~~~fP~~~--~~~~yi~GESYaG~YvP~la~~i~~~n~~--~~~~~inLkGi~IGNg~~~ 64 (320)
..++...+++|... ...++|+|+|-||--.-..|..|.+..-+ .....+++.-+..|.|-+.
T Consensus 281 ~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 281 TEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred HHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 44566677788653 35799999999999888777778653211 1112345666777777664
No 115
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=42.32 E-value=35 Score=29.66 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=24.3
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELA 246 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~ 246 (320)
+++++|++|+.|..|+..-.++.+++..
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 6899999999999999998888777554
No 116
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=42.23 E-value=50 Score=29.37 Aligned_cols=41 Identities=24% Similarity=0.242 Sum_probs=28.2
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
....+++|+|.|.||.-+-.++. ... -.+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~----~~p------~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIAL----KNP------DRFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHH----hCc------ccceEEEEECCccCc
Confidence 55578999999999964433332 221 236889888898775
No 117
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=41.94 E-value=51 Score=29.95 Aligned_cols=53 Identities=26% Similarity=0.380 Sum_probs=36.1
Q ss_pred HHHHHHhCCC-CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 5 MMNWYEKFPE-FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 5 L~~F~~~fP~-~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
|..|.+..-+ ....|+||.|.|-||- ||..-+... .-+++|+++-+|++....
T Consensus 93 l~~~~~~~~~~~~~~p~~l~gHSmGg~----Ia~~~~~~~------~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 93 LDAFVETIAEPDPGLPVFLLGHSMGGL----IALLYLARY------PPRIDGLVLSSPALGLGG 146 (298)
T ss_pred HHHHHHHHhccCCCCCeEEEEeCcHHH----HHHHHHHhC------CccccEEEEECccccCCh
Confidence 4445544322 4578999999999995 444333332 247899999999998753
No 118
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=41.86 E-value=34 Score=32.50 Aligned_cols=41 Identities=24% Similarity=0.420 Sum_probs=27.6
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+.+++|.|+|.||.-+-.++ ...+ ..-.++|+++.+|++..
T Consensus 207 ~~~i~lvGhSmGG~ial~~a----~~p~----~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 207 GVPCFLFGHSTGGAVVLKAA----SYPS----IEDKLEGIVLTSPALRV 247 (395)
T ss_pred CCCEEEEEECHHHHHHHHHH----hccC----cccccceEEEECccccc
Confidence 45899999999997544332 2111 12358999999998753
No 119
>PLN02753 triacylglycerol lipase
Probab=41.47 E-value=53 Score=32.37 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCC--CCCCceEEEcccCCceehHHHHHHHHHhh--cCCCCCceeeeEEEEeCCCCC
Q 020909 3 VFMMNWYEKFPE--FKSRELFLTGESYAGHYIPQLADVLLDHN--AHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 3 ~fL~~F~~~fP~--~~~~~~yi~GESYaG~YvP~la~~i~~~n--~~~~~~~inLkGi~IGNg~~~ 64 (320)
..++...+++|. .....++|+|+|-||--.-..|..|.+.. .......+++.-+..|.|-+.
T Consensus 295 ~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 295 TEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred HHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 445666777764 23568999999999998877777776531 111122356777788877664
No 120
>PRK04940 hypothetical protein; Provisional
Probab=41.09 E-value=18 Score=30.33 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=28.5
Q ss_pred CceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 18 RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 18 ~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
.++.|.|-|-||-|.-.+|.+ ..++.| +-||.+.|..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~------------~g~~aV-LiNPAv~P~~ 96 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFL------------CGIRQV-IFNPNLFPEE 96 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHH------------HCCCEE-EECCCCChHH
Confidence 578999999999988888863 345555 5589999854
No 121
>PRK11071 esterase YqiA; Provisional
Probab=40.89 E-value=61 Score=27.14 Aligned_cols=55 Identities=13% Similarity=0.178 Sum_probs=41.1
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPSRA 297 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~~a 297 (320)
...+|+|.+|..|-++|+.-+.+..++ .....+.||+|.-. ..+..
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~--------------------------------~~~~~~~ggdH~f~--~~~~~ 180 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA--------------------------------CRQTVEEGGNHAFV--GFERY 180 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh--------------------------------cceEEECCCCcchh--hHHHh
Confidence 356889999999999999877665541 22346688999873 34888
Q ss_pred HHHHHHHhc
Q 020909 298 LHLFSSFVH 306 (320)
Q Consensus 298 ~~m~~~fl~ 306 (320)
++.+..|+.
T Consensus 181 ~~~i~~fl~ 189 (190)
T PRK11071 181 FNQIVDFLG 189 (190)
T ss_pred HHHHHHHhc
Confidence 888888874
No 122
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=40.76 E-value=48 Score=30.75 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=39.2
Q ss_pred HHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 6 MNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 6 ~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
+.....+| +..++|+|.|=||-.....|..|...... ...+++-+--|-|-+.
T Consensus 162 ~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 162 RRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcc
Confidence 33445566 67899999999999999999999876543 2356677777766654
No 123
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=40.59 E-value=42 Score=28.43 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=26.8
Q ss_pred ccEEEEecCCCcccCcccHHHHHHHHHHhcCC
Q 020909 220 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNF 251 (320)
Q Consensus 220 irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~ 251 (320)
-+++|.+|..|.+||....+...+.|+.-.+.
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~~ 200 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAMLKVYGE 200 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHHHhcCC
Confidence 34789999999999999999999988755444
No 124
>PLN00413 triacylglycerol lipase
Probab=40.11 E-value=25 Score=34.09 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHH
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 41 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~ 41 (320)
.|+++++.+|++ +++|+|+|-||...-..|..+..
T Consensus 273 ~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 273 HLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 455666666644 69999999999987777766553
No 125
>PRK00870 haloalkane dehalogenase; Provisional
Probab=38.53 E-value=27 Score=31.31 Aligned_cols=47 Identities=17% Similarity=0.319 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
+.+..|++. +...+++|.|+|+||..+-.+|.. . +=.++++++-++.
T Consensus 103 ~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~ 149 (302)
T PRK00870 103 EWMRSWFEQ---LDLTDVTLVCQDWGGLIGLRLAAE----H------PDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHH---cCCCCEEEEEEChHHHHHHHHHHh----C------hhheeEEEEeCCC
Confidence 345555553 445689999999999866655542 1 1247888877764
No 126
>PRK10749 lysophospholipase L2; Provisional
Probab=38.13 E-value=44 Score=30.55 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=27.1
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
...++++.|.|.||.-+-.+|. .. +-.++|+++.+|...
T Consensus 129 ~~~~~~l~GhSmGG~ia~~~a~----~~------p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 129 PYRKRYALAHSMGGAILTLFLQ----RH------PGVFDAIALCAPMFG 167 (330)
T ss_pred CCCCeEEEEEcHHHHHHHHHHH----hC------CCCcceEEEECchhc
Confidence 4578999999999964433332 22 124789999988764
No 127
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=37.56 E-value=50 Score=27.29 Aligned_cols=43 Identities=23% Similarity=0.434 Sum_probs=31.4
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCcc
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPY 291 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~ 291 (320)
.++.+++..+.|..||+.-++.+.+.+. -.++.+.++||+-..
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l~------------------------------a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRLG------------------------------AELIILGGGGHFNAA 156 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHHT-------------------------------EEEEETS-TTSSGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHcC------------------------------CCeEECCCCCCcccc
Confidence 3555899999999999988888887551 556778889999764
No 128
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=36.48 E-value=43 Score=28.58 Aligned_cols=60 Identities=25% Similarity=0.315 Sum_probs=37.1
Q ss_pred HHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCc
Q 020909 215 IIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQP 294 (320)
Q Consensus 215 LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP 294 (320)
|..--..+||.+|+.|-++. +...++|+.. .. ++.+++.+|.|+-...-.
T Consensus 145 l~P~P~~~lvi~g~~Ddvv~------l~~~l~~~~~-----------------------~~-~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 145 LAPCPSPGLVIQGDADDVVD------LVAVLKWQES-----------------------IK-ITVITIPGADHFFHGKLI 194 (210)
T ss_pred ccCCCCCceeEecChhhhhc------HHHHHHhhcC-----------------------CC-CceEEecCCCceecccHH
Confidence 33346789999999994444 3344433312 11 888999999999765444
Q ss_pred HHHHHHHHHHh
Q 020909 295 SRALHLFSSFV 305 (320)
Q Consensus 295 ~~a~~m~~~fl 305 (320)
..-+.+..|+
T Consensus 195 -~l~~~i~~~l 204 (210)
T COG2945 195 -ELRDTIADFL 204 (210)
T ss_pred -HHHHHHHHHh
Confidence 3334444455
No 129
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=35.00 E-value=31 Score=28.90 Aligned_cols=22 Identities=23% Similarity=0.197 Sum_probs=17.4
Q ss_pred CCCceEEEcccCCceehHHHHH
Q 020909 16 KSRELFLTGESYAGHYIPQLAD 37 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~ 37 (320)
...+++|.|.|+||..+-.+|.
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHH
Confidence 4467999999999987666665
No 130
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=34.89 E-value=1.1e+02 Score=26.59 Aligned_cols=60 Identities=28% Similarity=0.496 Sum_probs=44.1
Q ss_pred ccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcH---H
Q 020909 220 IPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS---R 296 (320)
Q Consensus 220 irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~---~ 296 (320)
.++|+.+|..|.++|..-.+....... . .. ...+.+.+++|..+.+.+. .
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~--------~------------------~~-~~~~~~~~~~H~~~~~~~~~~~~ 285 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR--------E------------------RP-KKLLFVPGGGHIDLYDNPPAVEQ 285 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc--------c------------------CC-ceEEEecCCccccccCccHHHHH
Confidence 799999999999999887777665221 0 02 6677788899999986655 5
Q ss_pred HHHHHHHHhc
Q 020909 297 ALHLFSSFVH 306 (320)
Q Consensus 297 a~~m~~~fl~ 306 (320)
++.-+..|+.
T Consensus 286 ~~~~~~~f~~ 295 (299)
T COG1073 286 ALDKLAEFLE 295 (299)
T ss_pred HHHHHHHHHH
Confidence 6666666664
No 131
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=34.61 E-value=82 Score=28.05 Aligned_cols=67 Identities=25% Similarity=0.329 Sum_probs=42.3
Q ss_pred hhhhccCchHHHHHhCCCCCCccccccccccccccCCCCCCCCcHHHHHHHHhCCccEEEEecCCCcccCcccHHHHHHH
Q 020909 165 ERFFYLNLPEVQKALHANRTNLPYGWSMCSGVLNYSDTDSNINILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRE 244 (320)
Q Consensus 165 ~~~~ylN~~~V~~aL~v~~~~~~~~w~~cs~~v~~~~~d~~~~~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~ 244 (320)
......|..-|++||+...+ +.. .| ..+. ....+...-+++.|+.+|.|..|--||-.--+..++.
T Consensus 181 t~~~l~~~~~v~qaL~Ma~~----Em~----~I---~~~d---~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~~~~~l~~~ 246 (266)
T PF10230_consen 181 TTKFLLSPRVVRQALYMARD----EMR----EI---REDD---NDELIKHHNENGDKLWFYFGQNDHWVPNETRDELIER 246 (266)
T ss_pred HHHHhcCHHHHHHHHHHHHH----HHH----Hc---cCcc---hHHHHHHhccCCCEEEEEEeCCCCCCCHHHHHHHHHH
Confidence 44567777788999986321 111 11 1111 1233444444478999999999999998877777774
Q ss_pred H
Q 020909 245 L 245 (320)
Q Consensus 245 l 245 (320)
.
T Consensus 247 ~ 247 (266)
T PF10230_consen 247 Y 247 (266)
T ss_pred c
Confidence 4
No 132
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=34.35 E-value=69 Score=27.85 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 61 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg 61 (320)
.+|++..+.+|+ +++|+|+|=||.-.-+.|..+-+... -+++.+..-||
T Consensus 73 ~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~------~rI~~vy~fDg 121 (224)
T PF11187_consen 73 AYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ------DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh------hheeEEEEeeC
Confidence 345555555554 59999999999876666665443322 23455555555
No 133
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=34.16 E-value=23 Score=29.60 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=24.8
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
..++++.|.|+||..+..+|.+ . +-.++++++.++.
T Consensus 64 ~~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~~il~~~~ 99 (245)
T TIGR01738 64 PDPAIWLGWSLGGLVALHIAAT----H------PDRVRALVTVASS 99 (245)
T ss_pred CCCeEEEEEcHHHHHHHHHHHH----C------HHhhheeeEecCC
Confidence 3689999999999866665542 1 1236777776664
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=33.60 E-value=49 Score=28.25 Aligned_cols=48 Identities=29% Similarity=0.392 Sum_probs=28.6
Q ss_pred CccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccCccCCcH
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMVPYAQPS 295 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmvP~dqP~ 295 (320)
.+++|-..|..|.+++...++...+..... ..+..+..||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-----------------------------~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPD-----------------------------ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHH-----------------------------EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCC-----------------------------cEEEEECCCCcCcCChhh
Confidence 789999999999999988777776633210 224456789999987654
No 135
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=33.54 E-value=95 Score=27.17 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=48.9
Q ss_pred HHHHHhCCccEEEEecCCCcccCcccHHHHHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEc-CCcccCc
Q 020909 212 LKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVR-GAAHMVP 290 (320)
Q Consensus 212 ~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~-~AGHmvP 290 (320)
.+.+-+-..+||+..|+.|-+||.....+|=+.+... + .++-+++.|.+ .+.-.+. .+=-..|
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~-------~--------~~~~~v~~f~g-~~HGf~~~r~~~~~P 220 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKEN-------P--------AVGSQVKTFSG-VGHGFVARRANISSP 220 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcC-------c--------ccceeEEEcCC-ccchhhhhccCCCCh
Confidence 4444444689999999999999999999988866311 1 12234555543 2222221 2223457
Q ss_pred cCCc--HHHHHHHHHHhc
Q 020909 291 YAQP--SRALHLFSSFVH 306 (320)
Q Consensus 291 ~dqP--~~a~~m~~~fl~ 306 (320)
.|++ +.|++.+.+|++
T Consensus 221 ed~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 221 EDKKAAEEAYQRFISWFK 238 (242)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 7776 567777777764
No 136
>PRK03592 haloalkane dehalogenase; Provisional
Probab=33.10 E-value=49 Score=29.43 Aligned_cols=48 Identities=15% Similarity=0.380 Sum_probs=32.4
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+..+++. +...+++|.|.|.||..+-.+|. .. +=.++|+++.|+...|
T Consensus 83 l~~ll~~---l~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~~lil~~~~~~~ 130 (295)
T PRK03592 83 LDAWFDA---LGLDDVVLVGHDWGSALGFDWAA----RH------PDRVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHHHH---hCCCCeEEEEECHHHHHHHHHHH----hC------hhheeEEEEECCCCCC
Confidence 4445543 44578999999999975554443 21 2357999999986554
No 137
>PLN02578 hydrolase
Probab=32.88 E-value=41 Score=31.13 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=29.5
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
+..|.+. ....+++|.|.|+||.-.-.+|. .. +-.++++++.|+.
T Consensus 142 l~~~i~~---~~~~~~~lvG~S~Gg~ia~~~A~----~~------p~~v~~lvLv~~~ 186 (354)
T PLN02578 142 VADFVKE---VVKEPAVLVGNSLGGFTALSTAV----GY------PELVAGVALLNSA 186 (354)
T ss_pred HHHHHHH---hccCCeEEEEECHHHHHHHHHHH----hC------hHhcceEEEECCC
Confidence 4445542 34578999999999975544444 22 2357888887764
No 138
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=32.81 E-value=64 Score=32.06 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=33.2
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+.+|+.+-|. ...++.+.|.||||...-.+|. .. +-.||+++...++.|.
T Consensus 85 ~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~----~~------~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 85 LVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAV----LQ------PPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhc----cC------CCceeEEeecCcccch
Confidence 3456666653 3468999999999964333332 11 2368999998888763
No 139
>PLN02965 Probable pheophorbidase
Probab=32.73 E-value=49 Score=28.76 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=29.5
Q ss_pred HHHHHHhCCCCCC-CceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 5 MMNWYEKFPEFKS-RELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 5 L~~F~~~fP~~~~-~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
+..+.+. +.. +++++.|.|+||..+..+|.+ . +=.++++++-|+..
T Consensus 61 l~~~l~~---l~~~~~~~lvGhSmGG~ia~~~a~~----~------p~~v~~lvl~~~~~ 107 (255)
T PLN02965 61 LFALLSD---LPPDHKVILVGHSIGGGSVTEALCK----F------TDKISMAIYVAAAM 107 (255)
T ss_pred HHHHHHh---cCCCCCEEEEecCcchHHHHHHHHh----C------chheeEEEEEcccc
Confidence 4455553 322 689999999999766555541 1 12467888877643
No 140
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=32.26 E-value=28 Score=28.99 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
+.+..+.++.+ ..++++.|.|+||..+-.+| ... +=.++++++-++..
T Consensus 32 ~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a----~~~------p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 32 ADLEALREALG---IKKINLVGHSMGGMLALEYA----AQY------PERVKKLVLISPPP 79 (230)
T ss_dssp HHHHHHHHHHT---TSSEEEEEETHHHHHHHHHH----HHS------GGGEEEEEEESESS
T ss_pred HHHHHHHHHhC---CCCeEEEEECCChHHHHHHH----HHC------chhhcCcEEEeeec
Confidence 44555666543 34499999999996544433 322 22789998888764
No 141
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=31.95 E-value=28 Score=25.09 Aligned_cols=12 Identities=33% Similarity=0.623 Sum_probs=10.4
Q ss_pred CCccEEEEecCC
Q 020909 218 NGIPVWVFSGDQ 229 (320)
Q Consensus 218 ~~irVLiY~Gd~ 229 (320)
-|+||+||.||-
T Consensus 39 lgyrVhiyyGdS 50 (101)
T PF05414_consen 39 LGYRVHIYYGDS 50 (101)
T ss_pred cccEEEEEecce
Confidence 399999999984
No 142
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=31.82 E-value=26 Score=22.88 Aligned_cols=15 Identities=40% Similarity=1.123 Sum_probs=12.2
Q ss_pred hHHHHHHHH-hCCCCC
Q 020909 2 HVFMMNWYE-KFPEFK 16 (320)
Q Consensus 2 ~~fL~~F~~-~fP~~~ 16 (320)
+.+++.||. +|||+.
T Consensus 20 ~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 20 HMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHccchhHH
Confidence 578899996 699984
No 143
>PRK11071 esterase YqiA; Provisional
Probab=31.69 E-value=42 Score=28.15 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=22.9
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHH
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLAD 37 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~ 37 (320)
+++.++.+. +..++++|.|-|.||.+.-.+|.
T Consensus 49 ~~l~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 49 ELLESLVLE---HGGDPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred HHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHH
Confidence 345556554 33568999999999987776665
No 144
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=31.59 E-value=47 Score=29.04 Aligned_cols=44 Identities=16% Similarity=0.171 Sum_probs=28.7
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 61 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg 61 (320)
+..+.+. +...++++.|.|+||..+-.+|.+- +-.++++++-+|
T Consensus 91 l~~~l~~---l~~~~~~lvG~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~ 134 (282)
T TIGR03343 91 VKGLMDA---LDIEKAHLVGNSMGGATALNFALEY----------PDRIGKLILMGP 134 (282)
T ss_pred HHHHHHH---cCCCCeeEEEECchHHHHHHHHHhC----------hHhhceEEEECC
Confidence 4445443 4557899999999998777666521 123566666655
No 145
>PLN02934 triacylglycerol lipase
Probab=31.58 E-value=97 Score=30.48 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHH
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 41 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~ 41 (320)
.|+.+.+.+|.+ +++|+|+|-||-..-..|..+..
T Consensus 310 ~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 310 KLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 466777777764 69999999999877666655543
No 146
>PLN02162 triacylglycerol lipase
Probab=31.26 E-value=46 Score=32.32 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=22.9
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHH
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 40 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~ 40 (320)
|+.++.++|+ .+++|+|+|-||-..-..|..+.
T Consensus 268 L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 268 LRDKLARNKN---LKYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHH
Confidence 4455556664 46999999999986655555444
No 147
>PLN02408 phospholipase A1
Probab=31.11 E-value=92 Score=29.31 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
-++.+.+.+|.. ...++|+|+|-||-..-..|..|...-.. ...+.-+..|.|-+.
T Consensus 187 eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVG 242 (365)
T PLN02408 187 EIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVG 242 (365)
T ss_pred HHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCcc
Confidence 355666777764 34699999999998777777766643211 113455666666553
No 148
>PLN00021 chlorophyllase
Probab=30.76 E-value=49 Score=30.36 Aligned_cols=44 Identities=18% Similarity=0.101 Sum_probs=29.5
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
...+++|.|.|.||.-+=.+|...-+.. ....+++++.-+++..
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g 167 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDG 167 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccccc
Confidence 3467999999999986666554332211 1256888888787654
No 149
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=30.54 E-value=2.2e+02 Score=23.93 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=23.7
Q ss_pred HHHHHhCCccEEEEecCCCcccCcccHHHHHHHHH
Q 020909 212 LKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELA 246 (320)
Q Consensus 212 ~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~ 246 (320)
....-+-..+||+..|..|..++....+...+.|+
T Consensus 138 ~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~ 172 (218)
T PF01738_consen 138 LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALK 172 (218)
T ss_dssp HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHH
T ss_pred hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHH
Confidence 34444457899999999999999998888887663
No 150
>PLN02324 triacylglycerol lipase
Probab=30.13 E-value=1.1e+02 Score=29.40 Aligned_cols=60 Identities=17% Similarity=0.131 Sum_probs=37.7
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCC-----CCCceeeeEEEEeCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHS-----KGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~-----~~~~inLkGi~IGNg~~~ 64 (320)
-++.+.+.+|.. ...++|+|+|-||--.-..|..|.+..... ....+++.-+..|.|-+.
T Consensus 202 eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVG 266 (415)
T PLN02324 202 ELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIG 266 (415)
T ss_pred HHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcC
Confidence 355566667643 346999999999987777777776532110 012355666667766654
No 151
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=28.65 E-value=50 Score=28.83 Aligned_cols=52 Identities=19% Similarity=0.347 Sum_probs=41.0
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
+....+-..|...++.+.++|.|-||--+-.+|++- .-.+.++++-|-+++-
T Consensus 135 avldyl~t~~~~dktkivlfGrSlGGAvai~lask~----------~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 135 AVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN----------SDRISAIIVENTFLSI 186 (300)
T ss_pred HHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc----------hhheeeeeeechhccc
Confidence 445566778999999999999999998777776532 2367899999998873
No 152
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=28.06 E-value=83 Score=28.72 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=31.6
Q ss_pred eEEEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 277 LTFVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 277 Ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
=|++.|.++|-++..+||....+-|+-|+.|..+
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGY 308 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHccCCc
Confidence 7789999999999999999999999999999876
No 153
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=27.45 E-value=55 Score=31.07 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=25.7
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
...+++|.|+|+||.-+-.+|. .. +-.++++++.++..
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~----~~------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYAL----KH------PEHVQHLILVGPAG 211 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHH----hC------chhhcEEEEECCcc
Confidence 3458999999999964443332 22 23578888888764
No 154
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=27.29 E-value=44 Score=24.33 Aligned_cols=32 Identities=9% Similarity=0.185 Sum_probs=24.5
Q ss_pred hHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHH
Q 020909 2 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLD 41 (320)
Q Consensus 2 ~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~ 41 (320)
|.+.+.|+-++ |-.+.|.+-|+||+ +-+-|.+
T Consensus 10 YDAvRaflLr~--Y~~KrfIV~g~S~~------IlhNIyr 41 (100)
T PF07389_consen 10 YDAVRAFLLRH--YYDKRFIVYGRSNA------ILHNIYR 41 (100)
T ss_pred HHHHHHHHHHH--HccceEEEecchHH------HHHHHHH
Confidence 66788888776 77889999999986 5555554
No 155
>PLN02761 lipase class 3 family protein
Probab=27.08 E-value=1.2e+02 Score=30.03 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCC-C--CCceEEEcccCCceehHHHHHHHHHhhcC---CCCCceeeeEEEEeCCCCC
Q 020909 3 VFMMNWYEKFPEF-K--SRELFLTGESYAGHYIPQLADVLLDHNAH---SKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 3 ~fL~~F~~~fP~~-~--~~~~yi~GESYaG~YvP~la~~i~~~n~~---~~~~~inLkGi~IGNg~~~ 64 (320)
..++...+.+|+. + ...++|+|+|-||-..-..|..|...+-. .....+++.-+..|.|=+.
T Consensus 276 ~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 276 AEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred HHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 3455666667543 2 24599999999998777777777653211 0122456777777777664
No 156
>PRK10349 carboxylesterase BioH; Provisional
Probab=27.07 E-value=40 Score=29.18 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=25.4
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNP 61 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg 61 (320)
...++++.|.|+||.-+-.+|. .. +-.++++++-|+
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~~lili~~ 107 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIAL----TH------PERVQALVTVAS 107 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHH----hC------hHhhheEEEecC
Confidence 4468999999999976555543 11 245788888776
No 157
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=26.81 E-value=43 Score=27.77 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=21.1
Q ss_pred CCCCceEEEcccCCceehHHHHHHHH
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLL 40 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~ 40 (320)
+..-|+.|-|.||||.....+|..+.
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~ 111 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQ 111 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhc
Confidence 34558999999999998888887664
No 158
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=26.70 E-value=76 Score=28.39 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=26.4
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
+...+++|.|.|.||+-+-.+|.+.- -++++|+.-+|.
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~----------~~v~~iv~LDPa 146 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLN----------GKLGRITGLDPA 146 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhc----------CccceeEEecCC
Confidence 44568999999999997766665431 146777776554
No 159
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=26.35 E-value=60 Score=30.71 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=21.3
Q ss_pred ceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 19 ELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 19 ~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
.+.++|+||||-- .+..+.+. ..++..++-|||+-|..
T Consensus 229 ~i~~~GHSFGGAT---a~~~l~~d--------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGAT---ALQALRQD--------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHH---HHHHHHH---------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHH---HHHHHhhc--------cCcceEEEeCCcccCCC
Confidence 5899999999942 22223222 34678889999998853
No 160
>PLN02802 triacylglycerol lipase
Probab=26.13 E-value=1.2e+02 Score=29.89 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=34.8
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLR 64 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~ 64 (320)
++.+++++|.- ...++|+|+|-||-..-..|..|...... .+.+.-+..|.|-+.
T Consensus 318 V~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVG 372 (509)
T PLN02802 318 VRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVG 372 (509)
T ss_pred HHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcc
Confidence 34455555532 24689999999998877777777553321 234566777766654
No 161
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=25.59 E-value=61 Score=28.77 Aligned_cols=47 Identities=19% Similarity=0.110 Sum_probs=31.3
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
.|..|++ ++...+++|.|.|.||..+=.+|.+ . +-.++++++-|+..
T Consensus 91 ~l~~~l~---~l~~~~~~lvGhS~Gg~va~~~a~~----~------p~~v~~lili~~~~ 137 (294)
T PLN02824 91 QLNDFCS---DVVGDPAFVICNSVGGVVGLQAAVD----A------PELVRGVMLINISL 137 (294)
T ss_pred HHHHHHH---HhcCCCeEEEEeCHHHHHHHHHHHh----C------hhheeEEEEECCCc
Confidence 3445554 3445789999999999755444432 1 23579999988754
No 162
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=25.58 E-value=54 Score=31.08 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=27.7
Q ss_pred EEEEcCCcccCccCCcHHHHHHHHHHhcCCCC
Q 020909 279 FVTVRGAAHMVPYAQPSRALHLFSSFVHGRRL 310 (320)
Q Consensus 279 f~~V~~AGHmvP~dqP~~a~~m~~~fl~~~~~ 310 (320)
.+.|.|-||+ |.||=++-.++.++.-.+.|+
T Consensus 258 QvMVEGPGHv-Pl~~I~~nv~lqK~lc~~APf 288 (423)
T TIGR00190 258 QCMVEGPGHV-PLDQIEANVRLQKELCDEAPF 288 (423)
T ss_pred eEEEECCCCC-cHHHHHHHHHHHHHhhCCCCe
Confidence 5789999998 999999999999998888765
No 163
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=25.25 E-value=1.4e+02 Score=28.44 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=39.0
Q ss_pred HHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCCcchhHHHH
Q 020909 3 VFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQDVPAIYEF 75 (320)
Q Consensus 3 ~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~q~~~~~~~ 75 (320)
.|++.+-.++....+.|+.++|-|||| +||..+-..-. . -+.|..--+|-+....++..|.+.
T Consensus 98 ~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r~kyP-----~-~~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 98 YFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFRLKYP-----H-LFDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp HHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHHHH-T-----T-T-SEEEEET--CCHCCTTTHHHHH
T ss_pred HHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHHhhCC-----C-eeEEEEeccceeeeecccHHHHHH
Confidence 456666566766778899999999999 47776654321 2 256777777777777766665554
No 164
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=25.13 E-value=46 Score=28.53 Aligned_cols=48 Identities=23% Similarity=0.432 Sum_probs=26.3
Q ss_pred CccEEEEecCCCcccCcccHHH-HHHHHHHhcCCcccccccccccCCeeeeEEEEeCCeeEEEEEcCCcccC
Q 020909 219 GIPVWVFSGDQDSVVPLLGSRT-LIRELARDLNFEVTVPYGAWFHKQQVGGWGTEYGNLLTFVTVRGAAHMV 289 (320)
Q Consensus 219 ~irVLiY~Gd~D~i~n~~G~~~-~i~~l~~~~~~~~~~~~~~w~~~~~~~G~~~~~~~~Ltf~~V~~AGHmv 289 (320)
+-+||+.+|..|.+-|..-... .+++|+ ..+.. -+ ++.+.-.+|||++
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~-~~~~~---------------------~~-~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLK-AAGFP---------------------HN-VEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHH-CTT---------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHH-HhCCC---------------------Cc-ceEEEcCCCCcee
Confidence 6799999999999988765543 444443 11110 02 7777778999996
No 165
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=25.06 E-value=1.1e+02 Score=27.27 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=29.2
Q ss_pred CCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCC
Q 020909 17 SRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 66 (320)
Q Consensus 17 ~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~ 66 (320)
..+++|.|.|.||..+-.+|.+ . +-.++++++-+|.++-.
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~----~------p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANP----L------AAKCNRLVLWQPVVSGK 137 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHh----C------ccccceEEEeccccchH
Confidence 4689999999999876655532 1 13468889888887654
No 166
>smart00250 PLEC Plectin repeat.
Probab=24.43 E-value=38 Score=20.25 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=16.9
Q ss_pred CCCCCCCcchhHHHHHHHcCCCChHH
Q 020909 61 PLLRLDQDVPAIYEFFWSHGMISDEI 86 (320)
Q Consensus 61 g~~~p~~q~~~~~~~~~~~gli~~~~ 86 (320)
|++||.+.-.-...=|...|+|+.+.
T Consensus 12 Giidp~t~~~lsv~eA~~~glid~~~ 37 (38)
T smart00250 12 GIIDPETGQKLSVEEALRRGLIDPET 37 (38)
T ss_pred EEEcCCCCCCcCHHHHHHcCCCCccc
Confidence 66777655544556677788887653
No 167
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=24.19 E-value=57 Score=29.96 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=27.1
Q ss_pred CCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 14 EFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 14 ~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
++...+++|.|.|+||..+..+|.. . +-.++++++-++.
T Consensus 193 ~~~~~~~~lvG~S~Gg~~a~~~a~~----~------~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 ALGIERAHLVGHSMGGAVALRLAAR----A------PQRVASLTLIAPA 231 (371)
T ss_pred hcCCccEEEEeechHHHHHHHHHHh----C------chheeEEEEECcC
Confidence 3445689999999999877776653 1 1246777776654
No 168
>COG4569 MhpF Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.89 E-value=69 Score=27.53 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=19.4
Q ss_pred eEEEEeCCeeEEEEEcCCcccCccCCc
Q 020909 268 GWGTEYGNLLTFVTVRGAAHMVPYAQP 294 (320)
Q Consensus 268 G~~~~~~~~Ltf~~V~~AGHmvP~dqP 294 (320)
|.++.-+. -+|+.|.||||..|.+.-
T Consensus 258 ~~v~glkt-~~~lev~ga~~ylp~yag 283 (310)
T COG4569 258 GQVSGLKT-AVWLEVEGAAHYLPAYAG 283 (310)
T ss_pred eeeeccce-EEEEEEecccccCccccC
Confidence 44444444 789999999999997753
No 169
>PLN02847 triacylglycerol lipase
Probab=23.49 E-value=1.1e+02 Score=30.68 Aligned_cols=48 Identities=17% Similarity=0.355 Sum_probs=29.4
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGN 60 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGN 60 (320)
|++-+..||.| .+.|+|+|.||--.-.+ ..++..+.. .-+++-++.|-
T Consensus 241 L~kal~~~PdY---kLVITGHSLGGGVAALL-AilLRe~~~----fssi~CyAFgP 288 (633)
T PLN02847 241 LLKALDEYPDF---KIKIVGHSLGGGTAALL-TYILREQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHCCCC---eEEEeccChHHHHHHHH-HHHHhcCCC----CCCceEEEecC
Confidence 34445556655 58999999999866555 445543322 23456666664
No 170
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=23.26 E-value=1.4e+02 Score=27.72 Aligned_cols=40 Identities=28% Similarity=0.341 Sum_probs=29.0
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
-.++||.+|-|.||. .+|.++.++-+.. ..-.++++-+|+
T Consensus 146 ~~r~~~avG~SLGgn---mLa~ylgeeg~d~----~~~aa~~vs~P~ 185 (345)
T COG0429 146 PPRPLYAVGFSLGGN---MLANYLGEEGDDL----PLDAAVAVSAPF 185 (345)
T ss_pred CCCceEEEEecccHH---HHHHHHHhhccCc----ccceeeeeeCHH
Confidence 379999999999995 5788888765432 336666666664
No 171
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=22.74 E-value=1e+02 Score=29.51 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHH
Q 020909 4 FMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 39 (320)
Q Consensus 4 fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i 39 (320)
.|..|+++-+.=+..|+..+|-|||| ++|..+
T Consensus 153 ~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWf 184 (492)
T KOG2183|consen 153 ELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWF 184 (492)
T ss_pred HHHHHHhhccccccCcEEEecCchhh----HHHHHH
Confidence 34455555544456799999999999 455544
No 172
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=22.73 E-value=2.3e+02 Score=24.98 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=27.6
Q ss_pred hCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCC
Q 020909 11 KFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRL 65 (320)
Q Consensus 11 ~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p 65 (320)
.+|.+ .++.+.|.|.||..+-.+| ... -.++|+++.||++..
T Consensus 95 ~~~g~--~~i~l~G~S~Gg~~a~~~a----~~~-------~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 95 AAPHL--RRIVAWGLCDAASAALLYA----PAD-------LRVAGLVLLNPWVRT 136 (274)
T ss_pred hCCCC--CcEEEEEECHHHHHHHHHh----hhC-------CCccEEEEECCccCC
Confidence 34443 4599999999995332222 111 258999999999754
No 173
>COG4474 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.24 E-value=1.2e+02 Score=25.07 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=26.1
Q ss_pred cHHHHHHHHhCCccEEEEecCCCcccCcccHHHHHHHHH
Q 020909 208 ILPVLKRIIQNGIPVWVFSGDQDSVVPLLGSRTLIRELA 246 (320)
Q Consensus 208 ~~~~~~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l~ 246 (320)
....+..||+.|++=++++|+ +|++.|.-...
T Consensus 31 i~~~l~~lleeGleW~litGq-------LG~E~WA~Evv 62 (180)
T COG4474 31 IKKKLEALLEEGLEWVLITGQ-------LGFELWAAEVV 62 (180)
T ss_pred HHHHHHHHHhcCceEEEEecc-------ccHHHHHHHHH
Confidence 345678889999999999997 49999987653
No 174
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=21.75 E-value=3.3e+02 Score=28.52 Aligned_cols=29 Identities=21% Similarity=0.006 Sum_probs=25.1
Q ss_pred CCccEEEEecCCCcccCcccHHHHHHHHH
Q 020909 218 NGIPVWVFSGDQDSVVPLLGSRTLIRELA 246 (320)
Q Consensus 218 ~~irVLiY~Gd~D~i~n~~G~~~~i~~l~ 246 (320)
-+++||+.+|-.|..++..++.++.+.|.
T Consensus 454 IkvPvLlIhGw~D~~V~~~~s~~ly~aL~ 482 (767)
T PRK05371 454 IKASVLVVHGLNDWNVKPKQVYQWWDALP 482 (767)
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHHHH
Confidence 36899999999999999988888887764
No 175
>PRK14567 triosephosphate isomerase; Provisional
Probab=21.71 E-value=1.3e+02 Score=26.68 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=37.9
Q ss_pred hHHHHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCC
Q 020909 2 HVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLD 66 (320)
Q Consensus 2 ~~fL~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~ 66 (320)
+.|+++++..+-+-....+=|- |||.--|.=+..|++. -++.|+.||.+-++|.
T Consensus 185 ~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 185 HQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEEEeehhhhcHH
Confidence 5778888876421112222233 8999999999999863 3689999999998763
No 176
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=21.42 E-value=79 Score=26.71 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=24.3
Q ss_pred CCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCC
Q 020909 15 FKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLL 63 (320)
Q Consensus 15 ~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~ 63 (320)
....+++|+|.|.||...-.++ -.. +-.+.++++..|..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a----~~~------p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLG----CTY------PDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHH----HhC------chhheEEEeecCCc
Confidence 4456899999999997543333 222 12357776666654
No 177
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=21.30 E-value=69 Score=27.21 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=29.0
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCC
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPL 62 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~ 62 (320)
+.++++ ++.-.++++.|.|+||.-+-.+|.+ ... -.++++++.++.
T Consensus 56 l~~~l~---~~~~~~~~lvG~S~Gg~va~~~a~~----~~~-----~~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQ---SYNILPYWLVGYSLGGRIAMYYACQ----GLA-----GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHH---HcCCCCeEEEEECHHHHHHHHHHHh----CCc-----ccccEEEEeCCC
Confidence 444444 3455799999999999655544442 211 127888887664
No 178
>PRK10115 protease 2; Provisional
Probab=21.28 E-value=2.8e+02 Score=28.60 Aligned_cols=28 Identities=25% Similarity=0.340 Sum_probs=25.2
Q ss_pred Ccc-EEEEecCCCcccCcccHHHHHHHHH
Q 020909 219 GIP-VWVFSGDQDSVVPLLGSRTLIRELA 246 (320)
Q Consensus 219 ~ir-VLiY~Gd~D~i~n~~G~~~~i~~l~ 246 (320)
.++ +||.+|..|..|+..-.+.|...|+
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr 633 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLR 633 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHH
Confidence 567 7788999999999999999999885
No 179
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=20.73 E-value=57 Score=28.77 Aligned_cols=18 Identities=22% Similarity=0.604 Sum_probs=15.0
Q ss_pred CCCceEEEcccCCceehH
Q 020909 16 KSRELFLTGESYAGHYIP 33 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP 33 (320)
-..|+|..|+||||+-+=
T Consensus 103 ~~~P~y~vgHS~GGqa~g 120 (281)
T COG4757 103 PGHPLYFVGHSFGGQALG 120 (281)
T ss_pred CCCceEEeeccccceeec
Confidence 468999999999998543
No 180
>PLN02511 hydrolase
Probab=20.67 E-value=2.2e+02 Score=26.84 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=17.2
Q ss_pred HHHHHHhCCCCCCCceEEEcccCCceeh
Q 020909 5 MMNWYEKFPEFKSRELFLTGESYAGHYI 32 (320)
Q Consensus 5 L~~F~~~fP~~~~~~~yi~GESYaG~Yv 32 (320)
++..-.++| +.++++.|.|.||.-+
T Consensus 163 i~~l~~~~~---~~~~~lvG~SlGg~i~ 187 (388)
T PLN02511 163 VDHVAGRYP---SANLYAAGWSLGANIL 187 (388)
T ss_pred HHHHHHHCC---CCCEEEEEechhHHHH
Confidence 333334454 5689999999999643
No 181
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=20.66 E-value=1.7e+02 Score=26.37 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=36.5
Q ss_pred CCCceEEEcccCCceehHHHHHHHHHhhcCCCCCceeeeEEEEeCCCCCCCC
Q 020909 16 KSRELFLTGESYAGHYIPQLADVLLDHNAHSKGFKFNIKGVAIGNPLLRLDQ 67 (320)
Q Consensus 16 ~~~~~yi~GESYaG~YvP~la~~i~~~n~~~~~~~inLkGi~IGNg~~~p~~ 67 (320)
..+.+.|+|.|=||+-.-.++...-+.. ...+++.++.-|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3678999999999998888887776642 256788888899998754
No 182
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=20.31 E-value=1.9e+02 Score=29.25 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=28.5
Q ss_pred HHHHhCCccEEEEecCCCcccCcccHHHHHHHH
Q 020909 213 KRIIQNGIPVWVFSGDQDSVVPLLGSRTLIREL 245 (320)
Q Consensus 213 ~~LL~~~irVLiY~Gd~D~i~n~~G~~~~i~~l 245 (320)
+.||+-+..||+..|..|..|.-..-|..-++|
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKM 330 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKM 330 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHh
Confidence 568888999999999999999988777776655
Done!