Your job contains 1 sequence.
>020912
MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFL
ANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQ
AFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHG
LEVYRSDGKLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLKVARP
IWCGAIKEILESYADEPSDSNLSHITRYGRGKMLKRNYPLNCGKGLVDECLSLWLTNEER
QSAEFEAIKLKLSHVSINQG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020912
(320 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043738 - symbol:AT2G13840 species:3702 "Arabi... 1045 1.4e-105 1
UNIPROTKB|Q3Z644 - symbol:DET1610 "PHP domain N-terminal ... 301 9.4e-27 1
TIGR_CMR|DET_1610 - symbol:DET_1610 "PHP domain N-termina... 301 9.4e-27 1
UNIPROTKB|Q3A9Z4 - symbol:CHY_2227 "PHP domain protein" s... 250 2.4e-21 1
TIGR_CMR|CHY_2227 - symbol:CHY_2227 "PHP domain protein" ... 250 2.4e-21 1
UNIPROTKB|Q74D71 - symbol:GSU1448 "Metal-dependent phosph... 189 2.6e-13 1
TIGR_CMR|GSU_1448 - symbol:GSU_1448 "PHP domain protein" ... 189 2.6e-13 1
UNIPROTKB|Q8ECV6 - symbol:trpH "PHP family metal-dependen... 185 8.9e-13 1
TIGR_CMR|SO_3017 - symbol:SO_3017 "TrpH family protein" s... 185 8.9e-13 1
UNIPROTKB|Q60BV5 - symbol:MCA0359 "PHP domain protein" sp... 155 4.7e-09 1
UNIPROTKB|P77766 - symbol:yciV "conserved protein" specie... 148 4.1e-08 1
UNIPROTKB|Q885M1 - symbol:PSPTO_1810 "PHP domain protein"... 147 4.9e-08 1
UNIPROTKB|Q47YC5 - symbol:CPS_3521 "PHP domain protein" s... 146 7.6e-08 1
TIGR_CMR|CPS_3521 - symbol:CPS_3521 "PHP domain protein" ... 146 7.6e-08 1
UNIPROTKB|Q9KSS9 - symbol:VC_1177 "Putative uncharacteriz... 145 8.9e-08 1
TIGR_CMR|VC_1177 - symbol:VC_1177 "conserved hypothetical... 145 8.9e-08 1
>TAIR|locus:2043738 [details] [associations]
symbol:AT2G13840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006260 "DNA replication" evidence=IEA;ISS] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
EMBL:CP002685 GO:GO:0003677 GO:GO:0006260 EMBL:AC006218
EMBL:AC006436 GO:GO:0003887 SUPFAM:SSF89550 KO:K07053
IPI:IPI00546711 PIR:C84511 RefSeq:NP_565360.1 UniGene:At.26505
ProteinModelPortal:Q9ZQI9 SMR:Q9ZQI9 STRING:Q9ZQI9
EnsemblPlants:AT2G13840.1 GeneID:815867 KEGG:ath:AT2G13840
TAIR:At2g13840 HOGENOM:HOG000239493 InParanoid:Q9ZQI9 OMA:MEYIAIC
PhylomeDB:Q9ZQI9 ProtClustDB:CLSN2688093 ArrayExpress:Q9ZQI9
Genevestigator:Q9ZQI9 Uniprot:Q9ZQI9
Length = 434
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 195/317 (61%), Positives = 246/317 (77%)
Query: 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFL 60
M+G+PEA+E RRFG+KIIPG+EIST+F R S SEEPVHILAYY + GP+ Y+ELE+FL
Sbjct: 107 MAGVPEAVEAGRRFGIKIIPGIEISTLFGLRDSGSEEPVHILAYYGTSGPALYDELEDFL 166
Query: 61 ANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQ 120
IRDGRF+R ++M+ WEHV +IAGK VAPGR+HVARA++EAG+VENL+Q
Sbjct: 167 VKIRDGRFVRGREMVLKLNKLKIPLKWEHVTRIAGKDVAPGRMHVARALLEAGYVENLRQ 226
Query: 121 AFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHG 180
AF +YL+DGGPAY+TG+EP+AE AV+LI +TGG+AVLAHPWALKN IIR+LKD GLHG
Sbjct: 227 AFTKYLHDGGPAYATGTEPMAEEAVKLICKTGGVAVLAHPWALKNHVGIIRRLKDAGLHG 286
Query: 181 LEVYRSDGKLVAYTDLADTYGLLKLXXXXXXXXXXXXESELGSVKLPVLVLNDFLKVARP 240
+EVYRSDGKL +++LADTY LLKL ESELGSV LPV L DFL V RP
Sbjct: 287 VEVYRSDGKLEVFSELADTYNLLKLGGSDYHGKGGRNESELGSVNLPVTALQDFLNVGRP 346
Query: 241 IWCGAIKEILESYADEPSDSNLSHITRYGRGKMLKRNYPLNCGKGLVDECLSLWLTNEER 300
IWC AIK + ++ D+PSDSNLS+I R+ + ++LK N +CGK L+D CL++WLT++ER
Sbjct: 347 IWCEAIKATMRAFLDQPSDSNLSNILRFDKARILKGNSAWSCGKELMDRCLAIWLTSDER 406
Query: 301 QSAEFEAIKLKLSHVSI 317
S +FEA++LKLS V I
Sbjct: 407 NSNDFEALRLKLSFVPI 423
>UNIPROTKB|Q3Z644 [details] [associations]
symbol:DET1610 "PHP domain N-terminal region family
protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 OMA:MEYIAIC
HOGENOM:HOG000248105 RefSeq:YP_182305.1 ProteinModelPortal:Q3Z644
STRING:Q3Z644 GeneID:3229067 KEGG:det:DET1610 PATRIC:21610232
ProtClustDB:CLSK836789 BioCyc:DETH243164:GJNF-1611-MONOMER
Uniprot:Q3Z644
Length = 287
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 80/257 (31%), Positives = 131/257 (50%)
Query: 1 MSGIPEAIETARRFG-MKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEE--LE 57
+ G+ AIE RR+ +++IPGVEIST + G + VHIL Y+ Y++ L
Sbjct: 43 LGGVGIAIEATRRYPKLRVIPGVEISTDYS--GGD----VHILGYFVD-----YQDPVLN 91
Query: 58 NFLANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVEN 117
+ L +R R RA+DM+ W+ V++IAG+G GR H+A AM+E G+++N
Sbjct: 92 DTLTEMRRSRVERARDMVIKLNGLGMEISWQRVSEIAGEGTV-GRPHIATAMLEKGYIQN 150
Query: 118 LKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVG 177
+ +AF +Y+ GGPAY + E AV+L+ GG+ V+AHP + + ++ +L G
Sbjct: 151 MGEAFDKYIGRGGPAYVERIKMNPEEAVRLVLSCGGIPVMAHPLTIMDHEPMVERLVQAG 210
Query: 178 LHGLEVYR---SDGKLVAYTDLADTYGLLKLXXXXXXXXXXXXESELGSVKLPVLVLNDF 234
L GLE + + ++ LA + LL E+ +G ++P+
Sbjct: 211 LMGLECHYGGFNPQQIDGLVKLAGKHHLLTTGGSDYHGLDELTETPIGGAEVPLQDAKKL 270
Query: 235 LKVARPIWCGAIKEILE 251
+ AR I + E +E
Sbjct: 271 IAKARQIKAKGLAEDME 287
>TIGR_CMR|DET_1610 [details] [associations]
symbol:DET_1610 "PHP domain N-terminal region family
protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003887 SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 OMA:MEYIAIC
HOGENOM:HOG000248105 RefSeq:YP_182305.1 ProteinModelPortal:Q3Z644
STRING:Q3Z644 GeneID:3229067 KEGG:det:DET1610 PATRIC:21610232
ProtClustDB:CLSK836789 BioCyc:DETH243164:GJNF-1611-MONOMER
Uniprot:Q3Z644
Length = 287
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 80/257 (31%), Positives = 131/257 (50%)
Query: 1 MSGIPEAIETARRFG-MKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEE--LE 57
+ G+ AIE RR+ +++IPGVEIST + G + VHIL Y+ Y++ L
Sbjct: 43 LGGVGIAIEATRRYPKLRVIPGVEISTDYS--GGD----VHILGYFVD-----YQDPVLN 91
Query: 58 NFLANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVEN 117
+ L +R R RA+DM+ W+ V++IAG+G GR H+A AM+E G+++N
Sbjct: 92 DTLTEMRRSRVERARDMVIKLNGLGMEISWQRVSEIAGEGTV-GRPHIATAMLEKGYIQN 150
Query: 118 LKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVG 177
+ +AF +Y+ GGPAY + E AV+L+ GG+ V+AHP + + ++ +L G
Sbjct: 151 MGEAFDKYIGRGGPAYVERIKMNPEEAVRLVLSCGGIPVMAHPLTIMDHEPMVERLVQAG 210
Query: 178 LHGLEVYR---SDGKLVAYTDLADTYGLLKLXXXXXXXXXXXXESELGSVKLPVLVLNDF 234
L GLE + + ++ LA + LL E+ +G ++P+
Sbjct: 211 LMGLECHYGGFNPQQIDGLVKLAGKHHLLTTGGSDYHGLDELTETPIGGAEVPLQDAKKL 270
Query: 235 LKVARPIWCGAIKEILE 251
+ AR I + E +E
Sbjct: 271 IAKARQIKAKGLAEDME 287
>UNIPROTKB|Q3A9Z4 [details] [associations]
symbol:CHY_2227 "PHP domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 RefSeq:YP_361040.1
ProteinModelPortal:Q3A9Z4 STRING:Q3A9Z4 GeneID:3726733
KEGG:chy:CHY_2227 PATRIC:21277521 HOGENOM:HOG000248105 OMA:TRAHYAR
ProtClustDB:CLSK2772296 BioCyc:CHYD246194:GJCN-2226-MONOMER
Uniprot:Q3A9Z4
Length = 278
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 67/209 (32%), Positives = 107/209 (51%)
Query: 2 SGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLA 61
+G+ EA+E +++G+K+IPGVEIS +F E E +HIL Y + E L
Sbjct: 41 AGVIEAVEAGKKYGVKVIPGVEISVVF-----EPTE-MHILGYGIDVNDPIFAEA---LT 91
Query: 62 NIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQA 121
+++ R R M+ E V AG + GR H+AR +++ G+V ++++A
Sbjct: 92 KLKENRERRNPKMLAKLRELGFEITLEEVIAEAGGDIV-GRPHMARVLLKKGYVSSIEEA 150
Query: 122 FARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVG 177
F++YL G PAY + + A+ +I + GGL LAHP L+ I+ +L G
Sbjct: 151 FSKYLGKGCPAYVPKEKLTPKQAINIIKKAGGLTFLAHPVYLEKDDEGLKKILEELISYG 210
Query: 178 LHGLEVY---RSDGKLVAYTDLADTYGLL 203
L G+E Y ++ + Y +LA Y LL
Sbjct: 211 LDGIEAYYTYHNEEQTRLYLELAGKYNLL 239
>TIGR_CMR|CHY_2227 [details] [associations]
symbol:CHY_2227 "PHP domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006260 GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 KO:K07053 RefSeq:YP_361040.1
ProteinModelPortal:Q3A9Z4 STRING:Q3A9Z4 GeneID:3726733
KEGG:chy:CHY_2227 PATRIC:21277521 HOGENOM:HOG000248105 OMA:TRAHYAR
ProtClustDB:CLSK2772296 BioCyc:CHYD246194:GJCN-2226-MONOMER
Uniprot:Q3A9Z4
Length = 278
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 67/209 (32%), Positives = 107/209 (51%)
Query: 2 SGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLA 61
+G+ EA+E +++G+K+IPGVEIS +F E E +HIL Y + E L
Sbjct: 41 AGVIEAVEAGKKYGVKVIPGVEISVVF-----EPTE-MHILGYGIDVNDPIFAEA---LT 91
Query: 62 NIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQA 121
+++ R R M+ E V AG + GR H+AR +++ G+V ++++A
Sbjct: 92 KLKENRERRNPKMLAKLRELGFEITLEEVIAEAGGDIV-GRPHMARVLLKKGYVSSIEEA 150
Query: 122 FARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVG 177
F++YL G PAY + + A+ +I + GGL LAHP L+ I+ +L G
Sbjct: 151 FSKYLGKGCPAYVPKEKLTPKQAINIIKKAGGLTFLAHPVYLEKDDEGLKKILEELISYG 210
Query: 178 LHGLEVY---RSDGKLVAYTDLADTYGLL 203
L G+E Y ++ + Y +LA Y LL
Sbjct: 211 LDGIEAYYTYHNEEQTRLYLELAGKYNLL 239
>UNIPROTKB|Q74D71 [details] [associations]
symbol:GSU1448 "Metal-dependent phosphoesterase, PHP
family" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 HOGENOM:HOG000248105 RefSeq:NP_952499.1
ProteinModelPortal:Q74D71 DNASU:2687782 GeneID:2687782
KEGG:gsu:GSU1448 PATRIC:22025739 OMA:GVPVTWE ProtClustDB:CLSK828358
BioCyc:GSUL243231:GH27-1427-MONOMER Uniprot:Q74D71
Length = 288
Score = 189 (71.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 68/217 (31%), Positives = 105/217 (48%)
Query: 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAY-YSSCGPSKYEELENF 59
+ GI EA+ R G+ +IP VE+S + G S+ +HIL Y P+ ++L F
Sbjct: 42 VDGIDEAVAEGVRLGVDVIPAVELSV---ELGRFSD--LHILGYCIDHHDPAFRDKLAGF 96
Query: 60 LANIRDGRFLRAKDMIXXXXXXXXXX--XWEHVAKIAGKGVAPGRLHVARAMVEAGHVEN 117
+ RD R + I ++ V +AG V GR H+ R +V+ G+ +
Sbjct: 97 -RSARDNRGKAILEKINRRLLHSRKAPLSYDEVLSMAGGAV--GRPHIGRVLVDNGYARD 153
Query: 118 LKQAFARYLYDGG-PA-YSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA----IIR 171
++ AF RYL P Y E +AE I R GG++VLAHP + + ++
Sbjct: 154 MEDAFRRYLIPCNVPKRYMPAGEAIAE-----IRRIGGVSVLAHPPTITDDRRRLRQVVE 208
Query: 172 KLKDVGLHGLEVYRS----DGKLVAYTD-LADTYGLL 203
+L +GL GLEV+ + D L Y + LA+ +GLL
Sbjct: 209 QLAQLGLDGLEVFNNLCFKDDML--YLERLAEEFGLL 243
>TIGR_CMR|GSU_1448 [details] [associations]
symbol:GSU_1448 "PHP domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 HOGENOM:HOG000248105 RefSeq:NP_952499.1
ProteinModelPortal:Q74D71 DNASU:2687782 GeneID:2687782
KEGG:gsu:GSU1448 PATRIC:22025739 OMA:GVPVTWE ProtClustDB:CLSK828358
BioCyc:GSUL243231:GH27-1427-MONOMER Uniprot:Q74D71
Length = 288
Score = 189 (71.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 68/217 (31%), Positives = 105/217 (48%)
Query: 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAY-YSSCGPSKYEELENF 59
+ GI EA+ R G+ +IP VE+S + G S+ +HIL Y P+ ++L F
Sbjct: 42 VDGIDEAVAEGVRLGVDVIPAVELSV---ELGRFSD--LHILGYCIDHHDPAFRDKLAGF 96
Query: 60 LANIRDGRFLRAKDMIXXXXXXXXXX--XWEHVAKIAGKGVAPGRLHVARAMVEAGHVEN 117
+ RD R + I ++ V +AG V GR H+ R +V+ G+ +
Sbjct: 97 -RSARDNRGKAILEKINRRLLHSRKAPLSYDEVLSMAGGAV--GRPHIGRVLVDNGYARD 153
Query: 118 LKQAFARYLYDGG-PA-YSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA----IIR 171
++ AF RYL P Y E +AE I R GG++VLAHP + + ++
Sbjct: 154 MEDAFRRYLIPCNVPKRYMPAGEAIAE-----IRRIGGVSVLAHPPTITDDRRRLRQVVE 208
Query: 172 KLKDVGLHGLEVYRS----DGKLVAYTD-LADTYGLL 203
+L +GL GLEV+ + D L Y + LA+ +GLL
Sbjct: 209 QLAQLGLDGLEVFNNLCFKDDML--YLERLAEEFGLL 243
>UNIPROTKB|Q8ECV6 [details] [associations]
symbol:trpH "PHP family metal-dependent phosphoesterases
TrpH" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003887 SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:NP_718585.1 ProteinModelPortal:Q8ECV6
GeneID:1170705 KEGG:son:SO_3017 PATRIC:23525670
ProtClustDB:CLSK906959 Uniprot:Q8ECV6
Length = 286
Score = 185 (70.2 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 61/189 (32%), Positives = 92/189 (48%)
Query: 1 MSGIPEA--IETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELEN 58
++G+ EA A+ +K+I GVEIST R + + +HI+A + EL
Sbjct: 46 VAGLSEARAFNQAQAEPLKLISGVEIST----RWNSYD--IHIVALNFD---ETHAELLR 96
Query: 59 FLANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENL 118
FLA+ R+ R RA+++ +E K+A G A R H AR + + GH ++
Sbjct: 97 FLAHQRELREQRAEEIGHRLAKAGIEGAYEGAKKLAA-GAALSRGHYARWLADNGHAVDM 155
Query: 119 KQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA----IIRKLK 174
F RYL G Y + A+++IH GGLAVLAHP K A ++R+ K
Sbjct: 156 PSVFKRYLARGKTGYVPNNWGDMASAIKVIHNAGGLAVLAHPSGYKLSAKWLKRLVREFK 215
Query: 175 DVGLHGLEV 183
+ G +EV
Sbjct: 216 EAGGDAMEV 224
>TIGR_CMR|SO_3017 [details] [associations]
symbol:SO_3017 "TrpH family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=ISS] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003887
SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053 OMA:TRAHYAR
RefSeq:NP_718585.1 ProteinModelPortal:Q8ECV6 GeneID:1170705
KEGG:son:SO_3017 PATRIC:23525670 ProtClustDB:CLSK906959
Uniprot:Q8ECV6
Length = 286
Score = 185 (70.2 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 61/189 (32%), Positives = 92/189 (48%)
Query: 1 MSGIPEA--IETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELEN 58
++G+ EA A+ +K+I GVEIST R + + +HI+A + EL
Sbjct: 46 VAGLSEARAFNQAQAEPLKLISGVEIST----RWNSYD--IHIVALNFD---ETHAELLR 96
Query: 59 FLANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENL 118
FLA+ R+ R RA+++ +E K+A G A R H AR + + GH ++
Sbjct: 97 FLAHQRELREQRAEEIGHRLAKAGIEGAYEGAKKLAA-GAALSRGHYARWLADNGHAVDM 155
Query: 119 KQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA----IIRKLK 174
F RYL G Y + A+++IH GGLAVLAHP K A ++R+ K
Sbjct: 156 PSVFKRYLARGKTGYVPNNWGDMASAIKVIHNAGGLAVLAHPSGYKLSAKWLKRLVREFK 215
Query: 175 DVGLHGLEV 183
+ G +EV
Sbjct: 216 EAGGDAMEV 224
>UNIPROTKB|Q60BV5 [details] [associations]
symbol:MCA0359 "PHP domain protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0003887
SUPFAM:SSF89550 HOGENOM:HOG000248104 KO:K07053 OMA:TRAHYAR
RefSeq:YP_112891.1 ProteinModelPortal:Q60BV5 GeneID:3104707
KEGG:mca:MCA0359 PATRIC:22604461 Uniprot:Q60BV5
Length = 277
Score = 155 (59.6 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 59/210 (28%), Positives = 93/210 (44%)
Query: 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFL 60
++G+ EA A G+ +IPGVE+S + ES +H++ + P + L +
Sbjct: 40 VAGLKEAGAAAAEAGLCLIPGVELSVTW-----ESRT-IHVVGL--NIVPD-HPGLNQGM 90
Query: 61 ANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQ 120
++ RF RA++M E +AG G+ R H ARA+V+ G ++
Sbjct: 91 RRLQAVRFERAQEMDRRLTKKGIPGTLEIAVGLAGAGMVT-RTHFARALVQLGQAATVRD 149
Query: 121 AFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL----KDV 176
F ++L G P + AV I GG+AVLAHP K + I +L K
Sbjct: 150 VFDKFLTQGKPGHVPTVWAEMTAAVGWIIEAGGVAVLAHPQRYKMTGSWIGRLAGDFKAA 209
Query: 177 GLHGLEVYRSDGK---LVAYTDLADTYGLL 203
G +EV + + A +A +GLL
Sbjct: 210 GGEAIEVVSGNATSSDIQANAAIARRHGLL 239
>UNIPROTKB|P77766 [details] [associations]
symbol:yciV "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0006260 "DNA replication" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 SUPFAM:SSF89550
PIR:E64874 RefSeq:NP_415782.1 RefSeq:YP_489534.1
ProteinModelPortal:P77766 SMR:P77766 IntAct:P77766 PRIDE:P77766
EnsemblBacteria:EBESCT00000001903 EnsemblBacteria:EBESCT00000017316
GeneID:12931131 GeneID:945857 KEGG:ecj:Y75_p1240 KEGG:eco:b1266
PATRIC:32117790 EchoBASE:EB4005 EcoGene:EG14257 eggNOG:COG0613
HOGENOM:HOG000248104 KO:K07053 OMA:QAWEQPQ ProtClustDB:CLSK880131
BioCyc:EcoCyc:G6634-MONOMER BioCyc:ECOL316407:JW1258-MONOMER
Genevestigator:P77766 Uniprot:P77766
Length = 293
Score = 148 (57.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 53/174 (30%), Positives = 79/174 (45%)
Query: 2 SGIPEAIETARRFGM--KIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENF 59
+ I A E R G+ +IPGVEIST++ E+ E +HI+ + + F
Sbjct: 49 AAIAPAREEISRSGLALNLIPGVEISTVW-----ENHE-IHIVGLNIDI---THPLMCEF 99
Query: 60 LANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLK 119
LA + R RA+ + E ++A +G A R H AR +VE G ++
Sbjct: 100 LAQQTERRNQRAQLIAERLEKAQIPGALEGAQRLA-QGGAVTRGHFARFLVECGKASSMA 158
Query: 120 QAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL 173
F +YL G Y E A+ +IH +GG AVLAHP A +++L
Sbjct: 159 DVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRL 212
>UNIPROTKB|Q885M1 [details] [associations]
symbol:PSPTO_1810 "PHP domain protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE016853 GenomeReviews:AE016853_GR GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:NP_791635.1 ProteinModelPortal:Q885M1
GeneID:1183451 KEGG:pst:PSPTO_1810 PATRIC:19994884
ProtClustDB:CLSK867810 BioCyc:PSYR223283:GJIX-1845-MONOMER
Uniprot:Q885M1
Length = 287
Score = 147 (56.8 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 55/192 (28%), Positives = 83/192 (43%)
Query: 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAY-YSSCGPSKYEELENF 59
+ G+ EA A GM+++ GVE+S C G + +H+L Y + + P+ L
Sbjct: 41 LEGLEEARTAAHSLGMQLVNGVELS---CTWGGAT---IHVLGYGFDTQAPA----LTEA 90
Query: 60 LANIRDGRFLRAKDMIXXXXXXXXXXXWEHVAKI----AGKGVAPGRLHVARAMVEAGHV 115
+A + +GR+LRA+++ E I G AP R H A MV AG V
Sbjct: 91 IARLHEGRWLRAEEISRKLAIKGMPGALEGARAIQQALGDSGNAPARPHFADFMVRAGFV 150
Query: 116 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLK- 174
++ +AF ++L G P E V + +G LAHP + RKL
Sbjct: 151 KDRAEAFRKWLGAGKLGDVKQHWPTLEDTVATLRASGAWVSLAHPSHYDFTRSKRRKLVG 210
Query: 175 ---DVGLHGLEV 183
G H +EV
Sbjct: 211 DFVQAGGHAIEV 222
>UNIPROTKB|Q47YC5 [details] [associations]
symbol:CPS_3521 "PHP domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:YP_270195.1 ProteinModelPortal:Q47YC5
STRING:Q47YC5 GeneID:3519891 KEGG:cps:CPS_3521 PATRIC:21469979
BioCyc:CPSY167879:GI48-3549-MONOMER Uniprot:Q47YC5
Length = 301
Score = 146 (56.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 53/176 (30%), Positives = 82/176 (46%)
Query: 16 MKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMI 75
+K+I G+EIST + +G E +HI+ K EL++ + ++ R RA M
Sbjct: 79 LKLIDGIEISTAW--QGFE----IHIVGLNID---KKNSELKSLIEQQQEAREQRAISMG 129
Query: 76 XXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP---- 131
+ +AG+G R H A+ + + GHV ++QAF +Y+ G
Sbjct: 130 EKLTKCGFPTIYTDAKAMAGEGSIT-RAHFAKVLHQQGHVSTMQQAFDKYIGKKGSKGQR 188
Query: 132 AYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL----KDVGLHGLEV 183
AY + E A+ IH+ GG AV+AHP A +R+L +V GLEV
Sbjct: 189 AYVKPNWCSIEEAIVAIHQAGGSAVMAHPIRYDLSAKWLRRLIVHFSEVSGDGLEV 244
>TIGR_CMR|CPS_3521 [details] [associations]
symbol:CPS_3521 "PHP domain protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003141 InterPro:IPR004013 InterPro:IPR016195
Pfam:PF02811 SMART:SM00481 GO:GO:0003677 GO:GO:0006260
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003887
SUPFAM:SSF89550 eggNOG:COG0613 HOGENOM:HOG000248104 KO:K07053
OMA:TRAHYAR RefSeq:YP_270195.1 ProteinModelPortal:Q47YC5
STRING:Q47YC5 GeneID:3519891 KEGG:cps:CPS_3521 PATRIC:21469979
BioCyc:CPSY167879:GI48-3549-MONOMER Uniprot:Q47YC5
Length = 301
Score = 146 (56.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 53/176 (30%), Positives = 82/176 (46%)
Query: 16 MKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMI 75
+K+I G+EIST + +G E +HI+ K EL++ + ++ R RA M
Sbjct: 79 LKLIDGIEISTAW--QGFE----IHIVGLNID---KKNSELKSLIEQQQEAREQRAISMG 129
Query: 76 XXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP---- 131
+ +AG+G R H A+ + + GHV ++QAF +Y+ G
Sbjct: 130 EKLTKCGFPTIYTDAKAMAGEGSIT-RAHFAKVLHQQGHVSTMQQAFDKYIGKKGSKGQR 188
Query: 132 AYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL----KDVGLHGLEV 183
AY + E A+ IH+ GG AV+AHP A +R+L +V GLEV
Sbjct: 189 AYVKPNWCSIEEAIVAIHQAGGSAVMAHPIRYDLSAKWLRRLIVHFSEVSGDGLEV 244
>UNIPROTKB|Q9KSS9 [details] [associations]
symbol:VC_1177 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003141 InterPro:IPR004013
InterPro:IPR016195 Pfam:PF02811 SMART:SM00481 GO:GO:0003677
GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003887
SUPFAM:SSF89550 KO:K07053 OMA:QAWEQPQ PIR:D82233 RefSeq:NP_230822.1
ProteinModelPortal:Q9KSS9 DNASU:2614610 GeneID:2614610
KEGG:vch:VC1177 PATRIC:20081444 ProtClustDB:CLSK874244
Uniprot:Q9KSS9
Length = 290
Score = 145 (56.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 12 RRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRA 71
+++ ++++ G+EIST++ + +HI+ + P+ E L +A + R RA
Sbjct: 54 QQYPLQLVNGIEISTVW------QNKDIHIVGL--NIDPNS-EALGQLIARQQQRRVERA 104
Query: 72 KDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP 131
+ + E V IA G R H A+ +V+ G+ N++Q F +YL P
Sbjct: 105 ELIAHRLQKATREGVLEEVQHIAD-GAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNP 163
Query: 132 AYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL 173
Y + AV IH GG AVLAHP A +++L
Sbjct: 164 GYVPPNWCSMSEAVSAIHAAGGQAVLAHPGRYDLTAKWLKRL 205
>TIGR_CMR|VC_1177 [details] [associations]
symbol:VC_1177 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003141
InterPro:IPR004013 InterPro:IPR016195 Pfam:PF02811 SMART:SM00481
GO:GO:0003677 GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003887 SUPFAM:SSF89550 KO:K07053 OMA:QAWEQPQ PIR:D82233
RefSeq:NP_230822.1 ProteinModelPortal:Q9KSS9 DNASU:2614610
GeneID:2614610 KEGG:vch:VC1177 PATRIC:20081444
ProtClustDB:CLSK874244 Uniprot:Q9KSS9
Length = 290
Score = 145 (56.1 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 45/162 (27%), Positives = 75/162 (46%)
Query: 12 RRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRA 71
+++ ++++ G+EIST++ + +HI+ + P+ E L +A + R RA
Sbjct: 54 QQYPLQLVNGIEISTVW------QNKDIHIVGL--NIDPNS-EALGQLIARQQQRRVERA 104
Query: 72 KDMIXXXXXXXXXXXWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGP 131
+ + E V IA G R H A+ +V+ G+ N++Q F +YL P
Sbjct: 105 ELIAHRLQKATREGVLEEVQHIAD-GAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNP 163
Query: 132 AYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKL 173
Y + AV IH GG AVLAHP A +++L
Sbjct: 164 GYVPPNWCSMSEAVSAIHAAGGQAVLAHPGRYDLTAKWLKRL 205
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 320 297 0.00093 115 3 11 22 0.40 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 611 (65 KB)
Total size of DFA: 205 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.50u 0.15s 20.65t Elapsed: 00:00:01
Total cpu time: 20.50u 0.15s 20.65t Elapsed: 00:00:01
Start: Fri May 10 15:21:22 2013 End: Fri May 10 15:21:23 2013