Query 020912
Match_columns 320
No_of_seqs 194 out of 1260
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 10:01:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 2.2E-51 7.4E-56 389.9 26.3 225 1-237 53-287 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 3.7E-41 1.3E-45 317.4 22.8 216 1-226 42-264 (292)
3 3e38_A Two-domain protein cont 99.6 2.1E-15 7.1E-20 145.3 11.8 144 2-238 72-234 (343)
4 2yxo_A Histidinol phosphatase; 99.2 2.2E-11 7.5E-16 110.9 8.7 72 141-214 137-229 (267)
5 2anu_A Hypothetical protein TM 99.2 1.3E-10 4.6E-15 106.3 11.0 76 139-224 132-215 (255)
6 1m65_A Hypothetical protein YC 98.9 1.2E-09 4.2E-14 98.2 6.8 73 140-214 113-197 (245)
7 2wje_A CPS4B, tyrosine-protein 98.8 3.3E-09 1.1E-13 96.5 7.0 74 140-214 121-208 (247)
8 3qy7_A Tyrosine-protein phosph 98.7 1.7E-08 5.8E-13 93.5 6.4 76 139-215 116-200 (262)
9 2w9m_A Polymerase X; SAXS, DNA 97.6 5.9E-05 2E-09 76.9 5.8 70 142-214 440-521 (578)
10 2hnh_A DNA polymerase III alph 97.3 0.0011 3.8E-08 70.9 12.1 54 1-62 47-100 (910)
11 3b0x_A DNA polymerase beta fam 96.8 0.0014 4.8E-08 66.7 6.2 71 142-214 452-534 (575)
12 2hpi_A DNA polymerase III alph 95.4 0.12 4.2E-06 56.8 13.1 46 1-46 50-101 (1220)
13 3dcp_A Histidinol-phosphatase; 95.0 0.056 1.9E-06 50.0 7.7 76 143-224 162-268 (283)
14 1v77_A PH1877P, hypothetical p 93.4 0.13 4.3E-06 45.5 6.3 72 140-214 85-173 (212)
15 3f2b_A DNA-directed DNA polyme 81.4 3.4 0.00012 44.8 8.1 55 1-60 157-221 (1041)
16 3ngf_A AP endonuclease, family 71.1 7.8 0.00027 34.0 6.4 42 165-206 24-66 (269)
17 1qwg_A PSL synthase;, (2R)-pho 60.1 14 0.00047 33.7 5.8 65 141-205 57-131 (251)
18 3kws_A Putative sugar isomeras 60.1 15 0.00053 32.3 6.2 42 165-206 39-82 (287)
19 3f4w_A Putative hexulose 6 pho 59.4 16 0.00056 30.9 6.0 62 143-204 42-106 (211)
20 3lmz_A Putative sugar isomeras 56.4 18 0.00061 31.4 5.9 39 167-205 33-78 (257)
21 3p6l_A Sugar phosphate isomera 55.3 21 0.00071 30.9 6.1 19 166-184 24-42 (262)
22 3dx5_A Uncharacterized protein 54.5 13 0.00043 32.7 4.6 41 166-206 17-66 (286)
23 2q02_A Putative cytoplasmic pr 54.2 36 0.0012 29.3 7.5 14 139-152 19-32 (272)
24 1k77_A EC1530, hypothetical pr 53.8 11 0.00038 32.5 4.1 41 166-206 17-58 (260)
25 2qul_A D-tagatose 3-epimerase; 49.3 39 0.0013 29.4 6.9 42 166-207 19-66 (290)
26 3vni_A Xylose isomerase domain 48.8 18 0.00062 31.8 4.7 41 166-206 19-65 (294)
27 4gbu_A NADPH dehydrogenase 1; 48.4 25 0.00087 33.5 5.9 23 140-162 97-121 (400)
28 3l23_A Sugar phosphate isomera 46.9 25 0.00086 31.6 5.4 41 166-206 31-77 (303)
29 2zvr_A Uncharacterized protein 46.6 28 0.00095 30.7 5.6 43 166-208 43-89 (290)
30 2g0w_A LMO2234 protein; putati 45.8 42 0.0014 29.7 6.7 14 139-152 36-49 (296)
31 4e38_A Keto-hydroxyglutarate-a 44.1 70 0.0024 28.4 7.7 59 141-200 24-83 (232)
32 3cny_A Inositol catabolism pro 43.5 20 0.00069 31.5 4.1 64 138-203 30-105 (301)
33 1i60_A IOLI protein; beta barr 43.3 35 0.0012 29.3 5.6 14 139-152 14-27 (278)
34 3ktc_A Xylose isomerase; putat 42.6 28 0.00095 31.6 5.0 41 166-206 35-79 (333)
35 2d73_A Alpha-glucosidase SUSB; 42.2 81 0.0028 32.9 8.8 77 135-216 414-512 (738)
36 3qc0_A Sugar isomerase; TIM ba 42.1 14 0.00049 31.9 2.8 38 167-204 21-61 (275)
37 3kts_A Glycerol uptake operon 42.1 63 0.0021 28.0 6.9 77 122-204 22-104 (192)
38 3tva_A Xylose isomerase domain 40.7 36 0.0012 29.8 5.3 46 167-212 24-76 (290)
39 2zds_A Putative DNA-binding pr 40.6 58 0.002 29.0 6.8 42 165-206 16-69 (340)
40 3cqj_A L-ribulose-5-phosphate 39.7 36 0.0012 29.9 5.2 42 165-206 31-84 (295)
41 3obe_A Sugar phosphate isomera 38.8 38 0.0013 30.5 5.2 42 166-207 38-95 (305)
42 1z41_A YQJM, probable NADH-dep 38.3 53 0.0018 30.4 6.3 22 141-162 85-108 (338)
43 1u83_A Phosphosulfolactate syn 37.9 52 0.0018 30.2 5.9 63 141-204 82-154 (276)
44 1vhc_A Putative KHG/KDPG aldol 37.3 1.5E+02 0.0053 25.7 8.8 61 139-200 5-66 (224)
45 4a3u_A NCR, NADH\:flavin oxido 37.0 37 0.0013 31.8 5.0 23 140-162 80-104 (358)
46 1vkf_A Glycerol uptake operon 36.6 65 0.0022 27.9 6.1 60 139-204 43-105 (188)
47 3gr7_A NADPH dehydrogenase; fl 36.5 42 0.0014 31.3 5.3 23 140-162 84-108 (340)
48 3a24_A Alpha-galactosidase; gl 36.5 89 0.003 32.0 8.0 78 136-217 344-430 (641)
49 1icp_A OPR1, 12-oxophytodienoa 36.2 55 0.0019 30.9 6.1 21 141-161 93-115 (376)
50 2x7v_A Probable endonuclease 4 35.9 45 0.0015 28.9 5.2 40 165-204 13-63 (287)
51 1qtw_A Endonuclease IV; DNA re 35.5 56 0.0019 28.2 5.7 41 164-204 12-63 (285)
52 4ab4_A Xenobiotic reductase B; 35.4 57 0.002 30.8 6.0 23 140-162 80-104 (362)
53 3aam_A Endonuclease IV, endoiv 35.1 65 0.0022 27.8 6.0 41 166-206 16-68 (270)
54 3gka_A N-ethylmaleimide reduct 34.6 60 0.0021 30.6 6.0 23 140-162 88-112 (361)
55 3u0h_A Xylose isomerase domain 34.5 27 0.00092 30.2 3.4 39 167-205 19-64 (281)
56 3nav_A Tryptophan synthase alp 33.4 1E+02 0.0034 27.9 7.1 12 72-83 37-48 (271)
57 3l5a_A NADH/flavin oxidoreduct 32.5 52 0.0018 31.7 5.3 23 140-162 105-129 (419)
58 1yx1_A Hypothetical protein PA 32.1 45 0.0016 28.8 4.5 37 169-205 28-68 (264)
59 3kru_A NADH:flavin oxidoreduct 31.6 69 0.0024 29.9 5.9 23 140-162 82-106 (343)
60 2hk0_A D-psicose 3-epimerase; 30.8 40 0.0014 30.0 3.9 42 166-208 39-86 (309)
61 3aal_A Probable endonuclease 4 30.7 1.2E+02 0.004 26.7 7.1 41 166-206 20-72 (303)
62 2p10_A MLL9387 protein; putati 30.1 27 0.00093 32.3 2.7 67 139-206 80-168 (286)
63 2qw5_A Xylose isomerase-like T 29.9 77 0.0026 28.5 5.8 40 168-207 35-87 (335)
64 3k30_A Histamine dehydrogenase 29.3 70 0.0024 32.4 5.9 23 140-162 90-114 (690)
65 3inp_A D-ribulose-phosphate 3- 29.3 83 0.0028 28.1 5.8 59 143-202 75-135 (246)
66 1m3u_A 3-methyl-2-oxobutanoate 28.8 2.2E+02 0.0076 25.7 8.6 92 117-212 92-210 (264)
67 3tjl_A NADPH dehydrogenase; OL 28.8 1E+02 0.0035 29.7 6.7 23 140-162 93-117 (407)
68 1nvm_A HOA, 4-hydroxy-2-oxoval 28.5 2.8E+02 0.0094 25.5 9.5 72 139-212 67-145 (345)
69 3qxb_A Putative xylose isomera 28.1 78 0.0027 28.2 5.4 39 168-206 39-88 (316)
70 2ftp_A Hydroxymethylglutaryl-C 27.4 1.5E+02 0.0051 26.8 7.3 61 140-204 63-140 (302)
71 3tha_A Tryptophan synthase alp 26.8 76 0.0026 28.6 5.0 74 118-202 61-142 (252)
72 1ps9_A 2,4-dienoyl-COA reducta 26.2 69 0.0024 32.2 5.2 23 140-162 82-106 (671)
73 1mxs_A KDPG aldolase; 2-keto-3 25.9 1.9E+02 0.0065 25.1 7.4 59 141-200 16-75 (225)
74 1o66_A 3-methyl-2-oxobutanoate 25.7 2.9E+02 0.01 25.1 8.8 70 140-212 119-210 (275)
75 2hsa_B 12-oxophytodienoate red 25.6 1E+02 0.0036 29.3 6.1 14 173-186 180-193 (402)
76 1o94_A Tmadh, trimethylamine d 25.4 79 0.0027 32.3 5.5 22 140-161 85-108 (729)
77 2jt1_A PEFI protein; solution 24.9 44 0.0015 24.5 2.6 43 70-116 5-55 (77)
78 1wdp_A Beta-amylase; (beta/alp 24.6 1.1E+02 0.0039 30.2 6.1 57 167-227 36-106 (495)
79 1wbh_A KHG/KDPG aldolase; lyas 24.4 1.6E+02 0.0054 25.4 6.6 58 143-201 8-66 (214)
80 1m65_A Hypothetical protein YC 22.4 34 0.0012 29.4 1.7 16 13-28 63-78 (245)
81 2xfr_A Beta-amylase; hydrolase 22.4 1.3E+02 0.0046 30.0 6.1 57 167-227 34-104 (535)
82 2czd_A Orotidine 5'-phosphate 21.3 1.1E+02 0.0037 25.9 4.8 68 142-210 90-166 (208)
83 1bxb_A Xylose isomerase; xylos 21.3 82 0.0028 29.4 4.3 40 166-205 35-86 (387)
84 1xla_A D-xylose isomerase; iso 20.2 63 0.0021 30.3 3.2 41 166-206 35-87 (394)
85 3ajx_A 3-hexulose-6-phosphate 20.1 2.2E+02 0.0075 23.5 6.5 60 144-203 43-105 (207)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=2.2e-51 Score=389.88 Aligned_cols=225 Identities=28% Similarity=0.438 Sum_probs=203.9
Q ss_pred CCCHHHHHHHHhhcCCeEeeeeEEEeEeccCCCCCCccEEEEEeccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020912 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNK 80 (320)
Q Consensus 1 ~~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~~~~~g~~vHILGY~~d~~~~~~~~L~~~l~~~~~~R~~r~~~ii~~L~~ 80 (320)
+.|+.++.+++++.||.+||||||||.|. +.++|||||++|+ .++.|+++|+.+|+.|.+|+++|+++|++
T Consensus 53 ~~g~~~~~~~~~~~gi~~i~GvEis~~~~------~~~vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~ 123 (301)
T 3o0f_A 53 TAGWDEATEASEEIGLPLLLGTEITAVDE------DVSVHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQ 123 (301)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEEEET------TEEEEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhcCCEEEEEEEEEEEeC------CceEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999996 6899999999985 57899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCCCCCHHHHHHHhhcCCCCccccCCCCCHHHHHHHHHHcCCEEEec
Q 020912 81 LKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLA 158 (320)
Q Consensus 81 ~G~~i~~eev~~~a~~~--~~~gR~hiA~~Lv~~G~~~~~~~af~~~L~~g~p~yv~~~~~~~~e~I~~I~~aGGiaVlA 158 (320)
. ++++||+|.+.++.+ ..+||||||++|+++||+++++++|++||++|+|+|||..+++++|+|++|+++||++|+|
T Consensus 124 ~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~~~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLA 202 (301)
T 3o0f_A 124 D-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGVYETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAA 202 (301)
T ss_dssp H-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTSCSSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEEC
T ss_pred H-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEec
Confidence 9 999999998876532 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC-----ChHHHHHHHHHcCccEEEEecCcC---cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccCccCCHHH
Q 020912 159 HPWALK-----NPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLV 230 (320)
Q Consensus 159 HP~~~~-----~~~~~i~~l~~~GldGIEv~~~~~---~~~~~~~lA~~~~L~~tgGSD~Hg~~~~~~~~lG~~~~p~~~ 230 (320)
||+++. ....++.+|++.|+|||||+|+.+ +.+.+.++|+++||++|||||||++++ +..+|.+.+|.+.
T Consensus 203 HP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~gL~~tgGSD~Hg~~~--~~~lG~~~~~~~~ 280 (301)
T 3o0f_A 203 HAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHDLLVTGGSDWHGKGK--PNGLGENLTDDDT 280 (301)
T ss_dssp STTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEECCCBCGGGS--SCCTTSSCBCHHH
T ss_pred ChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEEcCCCCCCC--CCcCCCcCCCHHH
Confidence 997652 246789999999999999999875 467889999999999999999999753 3689999999887
Q ss_pred HHHHhcc
Q 020912 231 LNDFLKV 237 (320)
Q Consensus 231 ~~~~~~~ 237 (320)
++.|.+.
T Consensus 281 ~~~l~~~ 287 (301)
T 3o0f_A 281 VREILCR 287 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7776653
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=3.7e-41 Score=317.41 Aligned_cols=216 Identities=29% Similarity=0.436 Sum_probs=191.9
Q ss_pred CCCHHHHHHHHhhcCCeEeeeeEEEeEeccCCCCCCccEEEEEeccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020912 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNK 80 (320)
Q Consensus 1 ~~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~~~~~g~~vHILGY~~d~~~~~~~~L~~~l~~~~~~R~~r~~~ii~~L~~ 80 (320)
+.|+.++.+++++.||++|||+||++.+. +.++|+|+|++|. .++.++++++.+++.|.+|+++|+++|++
T Consensus 42 ~~g~~~~~~~~~~~gi~vi~G~Ei~~~~~------~~~~hil~~~~d~---~~~~l~~~~~~~~~~r~~r~~~~~~~l~~ 112 (292)
T 2yb1_A 42 TGGLAEAAAAAARRGIPFLNGVEVSVSWG------RHTVHIVGLGIDP---AEPALAAGLKSIREGRLERARQMGASLEA 112 (292)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEEEEEEEET------TEEEEEEEESCCT---TCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHcCCEEEEEEEEEEecC------CceeEEEEEecCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999999999985 5689999999975 45789999999999999999999999999
Q ss_pred CCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHhhcCCCCccccCCCCCHHHHHHHHHHcCCEEEecCC
Q 020912 81 LKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHP 160 (320)
Q Consensus 81 ~G~~i~~eev~~~a~~~~~~gR~hiA~~Lv~~G~~~~~~~af~~~L~~g~p~yv~~~~~~~~e~I~~I~~aGGiaVlAHP 160 (320)
.|++++++++...++++..+||+|||++|++.|++++..++|++||+.++|+|+|..+++++++|++|+++||++|+|||
T Consensus 113 ~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~~~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP 192 (292)
T 2yb1_A 113 AGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDMRTVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHP 192 (292)
T ss_dssp TTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSHHHHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCG
T ss_pred cCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCHHHHHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECc
Confidence 99999999998776555578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC----hHHHHHHHHHcCccEEEEecCcC---cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccCccC
Q 020912 161 WALKN----PAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKL 226 (320)
Q Consensus 161 ~~~~~----~~~~i~~l~~~GldGIEv~~~~~---~~~~~~~lA~~~~L~~tgGSD~Hg~~~~~~~~lG~~~~ 226 (320)
+++.. ...+++.+++.|++||||+++.. +...+.++|+++||++|+|||||++.+ ++..+|....
T Consensus 193 ~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~~~~~~a~~~gl~~t~GSDaH~~~~-~~~~lG~~~~ 264 (292)
T 2yb1_A 193 GRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMHKFALHADRHGLYASSGSDFHAPGE-GGRDVGHTED 264 (292)
T ss_dssp GGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHHHHHHTCEEEEECCBCSTTC----CTTCCCC
T ss_pred CccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceEEeeCCCCcCC-CCCcCCCCCC
Confidence 98653 24677888889999999999875 357888999999999999999999864 3568998743
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.61 E-value=2.1e-15 Score=145.26 Aligned_cols=144 Identities=19% Similarity=0.134 Sum_probs=105.4
Q ss_pred CCHHHHHHHHhhcCCeEeeeeEEEeEeccCCCCCCccEEEEEeccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 020912 2 SGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKL 81 (320)
Q Consensus 2 ~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~~~~~g~~vHILGY~~d~~~~~~~~L~~~l~~~~~~R~~r~~~ii~~L~~~ 81 (320)
.|+.++.+.+++.|+.+|||+||++.+ +..|||+||.+. ..
T Consensus 72 ~g~~~~~~~a~~~gi~vi~G~Ei~~~~--------~~gHiL~l~~~~---~~---------------------------- 112 (343)
T 3e38_A 72 RSFDLCREQAEKLGILLIKGSEITRAM--------APGHFNAIFLSD---SN---------------------------- 112 (343)
T ss_dssp HHHHHHHHHHHHHTCEECCEEEEECST--------TTCEEEEESCSC---SG----------------------------
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEEEcC--------CCcEEEEEeCCC---CC----------------------------
Confidence 467889999999999999999999974 479999999741 00
Q ss_pred CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHhhcCCCCccccCCCCCHHHHHHHHHHcCCEEEecCCC
Q 020912 82 KLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPW 161 (320)
Q Consensus 82 G~~i~~eev~~~a~~~~~~gR~hiA~~Lv~~G~~~~~~~af~~~L~~g~p~yv~~~~~~~~e~I~~I~~aGGiaVlAHP~ 161 (320)
+ ....+++++++.+++.||++|+|||+
T Consensus 113 --~---------------------------------------------------~~~~~~~eli~~v~~~Ggl~iiAHP~ 139 (343)
T 3e38_A 113 --P---------------------------------------------------LEQKDYKDAFREAKKQGAFMFWNHPG 139 (343)
T ss_dssp --G---------------------------------------------------GCCSSHHHHHHHHHHTTCEEEECCTT
T ss_pred --C---------------------------------------------------CcccCHHHHHHHHHHCCCEEEEeCCC
Confidence 0 00146789999999999999999999
Q ss_pred CCCC-------hHHHHHHHH-HcCccEEEEecCcCcHHHHHHHHHHcCCceeecCCCCCCCCC---CCccccCc------
Q 020912 162 ALKN-------PAAIIRKLK-DVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSDYHGRGGH---GESELGSV------ 224 (320)
Q Consensus 162 ~~~~-------~~~~i~~l~-~~GldGIEv~~~~~~~~~~~~lA~~~~L~~tgGSD~Hg~~~~---~~~~lG~~------ 224 (320)
+... ... ++++. ..++|||||+|+...+....++|+.++|..+||||+|++... .+..+|..
T Consensus 140 r~~~~~~g~~~~~~-~~e~l~~~~iDaIEv~N~~~~n~~A~~la~~~~l~~~~GSDaH~~~~~~y~~~~~iGr~~T~v~~ 218 (343)
T 3e38_A 140 WDSQQPDTTKWWPE-HTALYQEGCMHGIEVANGHLYMPEAIQWCLDKNLTMIGTSDIHQPIQTDYDFEKGEHRTMTFVFA 218 (343)
T ss_dssp CTTTSSSCCCCCHH-HHHHHHTTCCSEEEEEETTEECTHHHHHHHHHTCEEEEECCBCSCHHHHCCGGGTCCCCEEEEEE
T ss_pred CcccCccccccccc-hHHHhcccCccEEEEcCCCCccHHHHHHHhhCCCceEeECCCCCCcccccccccccccceEEEec
Confidence 7531 111 33433 368999999998754455678999999999999999997210 11235543
Q ss_pred --cCCHHHHHHHhccc
Q 020912 225 --KLPVLVLNDFLKVA 238 (320)
Q Consensus 225 --~~p~~~~~~~~~~~ 238 (320)
...++++++|++..
T Consensus 219 ~~~S~e~ll~ALr~Gr 234 (343)
T 3e38_A 219 KERSLQGIREALDNRR 234 (343)
T ss_dssp SSSSHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHcCC
Confidence 23467778888743
No 4
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.22 E-value=2.2e-11 Score=110.91 Aligned_cols=72 Identities=19% Similarity=0.139 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCCEEEecCCCCCC---C----------hHHHHHHHHHcCccEEEEecCcC--------cHHHHHHHHHH
Q 020912 141 AEVAVQLIHRTGGLAVLAHPWALK---N----------PAAIIRKLKDVGLHGLEVYRSDG--------KLVAYTDLADT 199 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaVlAHP~~~~---~----------~~~~i~~l~~~GldGIEv~~~~~--------~~~~~~~lA~~ 199 (320)
.++++++++. |+++|+|||++.. . ...+++.+++.| .+||+.++.. ....+.++|++
T Consensus 137 ~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~ 214 (267)
T 2yxo_A 137 FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPEEALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARE 214 (267)
T ss_dssp HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCHHHHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCEEeCccHHHHhCCCCChHHHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHH
Confidence 3778888886 9999999998632 1 134577777888 5999986531 35788899999
Q ss_pred cCCceeecCCCCCCC
Q 020912 200 YGLLKLGGSDYHGRG 214 (320)
Q Consensus 200 ~~L~~tgGSD~Hg~~ 214 (320)
+|+.+|+|||+|++.
T Consensus 215 ~g~~~~~gSDaH~~~ 229 (267)
T 2yxo_A 215 LGIGLVLGSDAHRPE 229 (267)
T ss_dssp HTCCEEEECCBSSGG
T ss_pred cCCCEEEecCCCCHH
Confidence 999999999999974
No 5
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.16 E-value=1.3e-10 Score=106.27 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHcCCEEEecCCCCCCChHH-----HH---HHHHHcCccEEEEecCcCcHHHHHHHHHHcCCceeecCCC
Q 020912 139 PLAEVAVQLIHRTGGLAVLAHPWALKNPAA-----II---RKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLGGSDY 210 (320)
Q Consensus 139 ~~~~e~I~~I~~aGGiaVlAHP~~~~~~~~-----~i---~~l~~~GldGIEv~~~~~~~~~~~~lA~~~~L~~tgGSD~ 210 (320)
..++++++.++..|+++|+|||++...... .. +.+ ...+++||++++... .++|+++++.+|+|||+
T Consensus 132 ~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~~~~~~~~~~~~~-~~~~~aiEin~~~~~----~~~~~~~g~~~~~gSDA 206 (255)
T 2anu_A 132 LPVEEIVEKLKEQNALVIAAHPDRKKQDEEHLSWYLWANMERF-KDTFDAWEIANRDDL----FNSVGVKKYRYVANSDF 206 (255)
T ss_dssp SCHHHHHHHHHHTTCEEEECCCCTTC-----CCCHHHHSTTTT-TTTCSEEEEEETTEE----CHHHHHTTCCEEEECCB
T ss_pred CCHHHHHHHHHHCCCeEEEeCCCccccccccccccccchhhhh-hccCcEEEEcCCCch----hhHHHHcCCceEeccCC
Confidence 367899999999999999999997643110 01 112 236899999987632 23688999999999999
Q ss_pred CCCCCCCCccccCc
Q 020912 211 HGRGGHGESELGSV 224 (320)
Q Consensus 211 Hg~~~~~~~~lG~~ 224 (320)
|.+. .+|..
T Consensus 207 H~~~-----~ig~~ 215 (255)
T 2anu_A 207 HELW-----HVYSW 215 (255)
T ss_dssp CSGG-----GGSSE
T ss_pred CCCc-----ccCCc
Confidence 9973 46653
No 6
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=98.92 E-value=1.2e-09 Score=98.19 Aligned_cols=73 Identities=19% Similarity=0.158 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHcCCEEEecCCCCCC---ChHHHHHHHHHcCccEEEEecCcC---------cHHHHHHHHHHcCCceeec
Q 020912 140 LAEVAVQLIHRTGGLAVLAHPWALK---NPAAIIRKLKDVGLHGLEVYRSDG---------KLVAYTDLADTYGLLKLGG 207 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaVlAHP~~~~---~~~~~i~~l~~~GldGIEv~~~~~---------~~~~~~~lA~~~~L~~tgG 207 (320)
.++++++.++ +||++|+|||+++. ....+++.+++.| ++||++++.. ....+.++|+++|+..|+|
T Consensus 113 ~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~g 190 (245)
T 1m65_A 113 NTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINNSSFLHSRKGSEDNCREVAAAVRDAGGWVALG 190 (245)
T ss_dssp HHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEETTC----------CHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEECCCCcccCCCCCCchHHHHHHHHHcCCEEEEE
Confidence 4678899888 99999999998754 2356788888889 7999998653 3467889999999999999
Q ss_pred CCCCCCC
Q 020912 208 SDYHGRG 214 (320)
Q Consensus 208 SD~Hg~~ 214 (320)
||+|++.
T Consensus 191 SDaH~~~ 197 (245)
T 1m65_A 191 SDSHTAF 197 (245)
T ss_dssp CCBSSGG
T ss_pred CCCCChH
Confidence 9999973
No 7
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=98.85 E-value=3.3e-09 Score=96.51 Aligned_cols=74 Identities=22% Similarity=0.122 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHcCCEEEecCCCCCCC---hHHHHHHHHHcCccEEEEecCcC-----------cHHHHHHHHHHcCCcee
Q 020912 140 LAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLLKL 205 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaVlAHP~~~~~---~~~~i~~l~~~GldGIEv~~~~~-----------~~~~~~~lA~~~~L~~t 205 (320)
...+++..++.+|+++|+|||.++.. ...++..+++.|+. +|+.++.. ....+.+++.++|++.|
T Consensus 121 ~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~-lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~ 199 (247)
T 2wje_A 121 DIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY-TQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHV 199 (247)
T ss_dssp HHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE-EEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE-EEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEE
Confidence 36789999999999999999997642 35788999999997 99975432 23667788899999999
Q ss_pred ecCCCCCCC
Q 020912 206 GGSDYHGRG 214 (320)
Q Consensus 206 gGSD~Hg~~ 214 (320)
.|||+|++.
T Consensus 200 ~GSDaH~~~ 208 (247)
T 2wje_A 200 IASDMHNLD 208 (247)
T ss_dssp EECCBCCSS
T ss_pred EEeCCCCCc
Confidence 999999984
No 8
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=98.69 E-value=1.7e-08 Score=93.46 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHcCCEEEecCCCCCCC---hHHHHHHHHHcCccEEEEecCcC------cHHHHHHHHHHcCCceeecCC
Q 020912 139 PLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLHGLEVYRSDG------KLVAYTDLADTYGLLKLGGSD 209 (320)
Q Consensus 139 ~~~~e~I~~I~~aGGiaVlAHP~~~~~---~~~~i~~l~~~GldGIEv~~~~~------~~~~~~~lA~~~~L~~tgGSD 209 (320)
....++|..+..+|+++|+|||.++.. ....+..+++.|+ ++|+..+.. ....+.+.+.++|++.|.|||
T Consensus 116 ~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~-~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSD 194 (262)
T 3qy7_A 116 RYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA-ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASD 194 (262)
T ss_dssp TTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEcc
Confidence 468999999999999999999997642 1257888999995 899986431 256777888899999999999
Q ss_pred CCCCCC
Q 020912 210 YHGRGG 215 (320)
Q Consensus 210 ~Hg~~~ 215 (320)
+|++..
T Consensus 195 aH~~~~ 200 (262)
T 3qy7_A 195 AHNVKT 200 (262)
T ss_dssp BCSSSS
T ss_pred CCCCCC
Confidence 999853
No 9
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=97.58 E-value=5.9e-05 Score=76.91 Aligned_cols=70 Identities=16% Similarity=0.032 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCCEEEecCCCCC---------CChHHHHHHHHHcCccEEEEecCcC---cHHHHHHHHHHcCCceeecCC
Q 020912 142 EVAVQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSD 209 (320)
Q Consensus 142 ~e~I~~I~~aGGiaVlAHP~~~---------~~~~~~i~~l~~~GldGIEv~~~~~---~~~~~~~lA~~~~L~~tgGSD 209 (320)
+.+++++. .|+++|+|||+.. ...+.+++.+++.|+ +||+.++.. ....+.++|++ |+..+.|||
T Consensus 440 ~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~g~-~lEIN~~~~r~~~~~~~~~~a~e-Gl~i~igSD 516 (578)
T 2w9m_A 440 ERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACEANGT-VVEINANAARLDLDWREALRWRE-RLKFAINTD 516 (578)
T ss_dssp HHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHTC-EEEEECSTTTCBSCHHHHHHHTT-TCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHCCC-EEEEECCCCCcCcHHHHHHHHHc-CCEEEEECC
Confidence 44555555 5999999999841 123567888888885 999987652 45778899999 999999999
Q ss_pred CCCCC
Q 020912 210 YHGRG 214 (320)
Q Consensus 210 ~Hg~~ 214 (320)
+|.+.
T Consensus 517 AH~~~ 521 (578)
T 2w9m_A 517 AHVPG 521 (578)
T ss_dssp CSSGG
T ss_pred CCChh
Confidence 99974
No 10
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=97.34 E-value=0.0011 Score=70.94 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHhhcCCeEeeeeEEEeEeccCCCCCCccEEEEEeccCCCCCChHHHHHHHHH
Q 020912 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGSESEEPVHILAYYSSCGPSKYEELENFLAN 62 (320)
Q Consensus 1 ~~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~~~~~g~~vHILGY~~d~~~~~~~~L~~~l~~ 62 (320)
|.|+.++.+++++.||++|+|+|+++.+.++ ....+|+++|..+ ...+.++++.
T Consensus 47 ~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~---~~~~~hlv~la~n-----~~g~~nL~~l 100 (910)
T 2hnh_A 47 LCGLVKFYGAGHGAGIKPIVGADFNVQCDLL---GDELTHLTVLAAN-----NTGYQNLTLL 100 (910)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEEEEEEECTTT---TTCCEEEEEEECS-----HHHHHHHHHH
T ss_pred chhHHHHHHHHHHCCCeEEEEEEEEEecCCC---CcccceEEEEEcC-----HHHHHHHHHH
Confidence 4689999999999999999999999987411 0136999999873 3455555443
No 11
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=96.78 E-value=0.0014 Score=66.66 Aligned_cols=71 Identities=24% Similarity=0.212 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCEEEecCCCC-C-----C---ChHHHHHHHHHcCccEEEEecCcC---cHHHHHHHHHHcCCceeecCC
Q 020912 142 EVAVQLIHRTGGLAVLAHPWA-L-----K---NPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGGSD 209 (320)
Q Consensus 142 ~e~I~~I~~aGGiaVlAHP~~-~-----~---~~~~~i~~l~~~GldGIEv~~~~~---~~~~~~~lA~~~~L~~tgGSD 209 (320)
+++++.++ .|+++|+|||+. + . ..+.+++.+++.| .++|+..+.. ....+.++|.++|+..+.|||
T Consensus 452 ~~l~~~i~-~g~v~IlaHp~~r~~~~r~~~~~~~~~il~~~~~~g-~~lEIN~~~~~~~~~~~~~~~a~e~G~~~vigSD 529 (575)
T 3b0x_A 452 KRLLKALE-NPFVHVLAHPTARLLGRRAPIEADWEAVFQKAKEKG-VAVEIDGYYDRMDLPDDLARMAYGMGLWISLSTD 529 (575)
T ss_dssp HHHHHHTT-CTTCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHHT-CEEEEECCTTTCBSCHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHh-cCCCeEEECCchhhcCCCcCchHHHHHHHHHHHHcC-CEEEEeCCCCcCCchHHHHHHHHHcCCeEEEECC
Confidence 34455554 799999999982 1 1 2345677777767 5999965431 246778899999999999999
Q ss_pred CCCCC
Q 020912 210 YHGRG 214 (320)
Q Consensus 210 ~Hg~~ 214 (320)
+|.+.
T Consensus 530 AH~~~ 534 (575)
T 3b0x_A 530 AHQTD 534 (575)
T ss_dssp BSSGG
T ss_pred CCChH
Confidence 99974
No 12
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=95.43 E-value=0.12 Score=56.80 Aligned_cols=46 Identities=22% Similarity=0.188 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHhhcCCeEeeeeEEEeEeccC-CCC-----CCccEEEEEecc
Q 020912 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQR-GSE-----SEEPVHILAYYS 46 (320)
Q Consensus 1 ~~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~-~~~-----~g~~vHILGY~~ 46 (320)
|.|+.++.+.|++.||++|+|+|+++...++ +.. .+...|++.|..
T Consensus 50 ~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~~~~~~d~~~~hLvlLAk 101 (1220)
T 2hpi_A 50 LFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRKRGKGLDGGYFHLTLLAK 101 (1220)
T ss_dssp CTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCCCC-----CEEEEEEEEC
T ss_pred chhHHHHHHHHHHcCCeEEEEEEEEEeccccccccccccccCccceEEEEEc
Confidence 4688999999999999999999999985321 100 011379999975
No 13
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=94.99 E-value=0.056 Score=49.95 Aligned_cols=76 Identities=20% Similarity=0.145 Sum_probs=51.3
Q ss_pred HHHHHHHHc-C--CEEEecCCCCC---C----------C------hHHHHHHHHHcCccEEEEecCcC---------cHH
Q 020912 143 VAVQLIHRT-G--GLAVLAHPWAL---K----------N------PAAIIRKLKDVGLHGLEVYRSDG---------KLV 191 (320)
Q Consensus 143 e~I~~I~~a-G--GiaVlAHP~~~---~----------~------~~~~i~~l~~~GldGIEv~~~~~---------~~~ 191 (320)
.++++|..- | -+-|++||+.. . . .+.+++.+++.|+ ++|+..+.- ...
T Consensus 162 ~~~~~i~~~l~~~~~dilgH~Dlir~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~g~-~lEiN~~~l~~~~~~~~yp~~ 240 (283)
T 3dcp_A 162 GVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRDY-ELDFNTAGLFKPLCGETYPPK 240 (283)
T ss_dssp HHHHHHHCCCCTTCCSEECCTTGGGTTGGGGTCCGGGCCHHHHHHHHHHHHHHHHHTC-EEEEECGGGGSTTCCSCBSCH
T ss_pred HHHHHHHhCccccCCCEEECCcHHHHcCcccccccccccHHHHHHHHHHHHHHHHcCC-EEEEechHhcCCCCCCcCCHH
Confidence 344555542 1 34699999831 1 1 2355666666676 899976431 246
Q ss_pred HHHHHHHHcCCceeecCCCCCCCCCCCccccCc
Q 020912 192 AYTDLADTYGLLKLGGSDYHGRGGHGESELGSV 224 (320)
Q Consensus 192 ~~~~lA~~~~L~~tgGSD~Hg~~~~~~~~lG~~ 224 (320)
.+.++|+++|..++-|||+|.+. .+|..
T Consensus 241 ~~~~~~~~~g~~i~igSDAH~~~-----~vg~~ 268 (283)
T 3dcp_A 241 KIVTLASELQIPFVYGSDSHGVQ-----DIGRG 268 (283)
T ss_dssp HHHHHHHHTTCCEEEECCBSSGG-----GTTTT
T ss_pred HHHHHHHHcCCCEEEEcCCCCHH-----HHhCh
Confidence 78899999999999999999973 57643
No 14
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=93.43 E-value=0.13 Score=45.45 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHcCCEEEecCCCCCC---Ch-HHHHHHHHHcCccEEEEecCcC---c----------HHHHHHHHHHcCC
Q 020912 140 LAEVAVQLIHRTGGLAVLAHPWALK---NP-AAIIRKLKDVGLHGLEVYRSDG---K----------LVAYTDLADTYGL 202 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaVlAHP~~~~---~~-~~~i~~l~~~GldGIEv~~~~~---~----------~~~~~~lA~~~~L 202 (320)
+.+..-.++ +. .|=|++||+..+ .. ..+++..++.|+ .+|+.++.. . ...+.++|++||.
T Consensus 85 ~~~~n~~a~-~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv-~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~ 161 (212)
T 1v77_A 85 DLRVIRYSI-EK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV-ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKV 161 (212)
T ss_dssp CHHHHHHHH-HT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC-EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHH-hC-CCCEEecccccccCCCCCHHHHHHHHHCCe-EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCC
Confidence 444333344 45 799999998542 11 456666677786 899987541 1 1357799999999
Q ss_pred ceeecCCCCCCC
Q 020912 203 LKLGGSDYHGRG 214 (320)
Q Consensus 203 ~~tgGSD~Hg~~ 214 (320)
.++-|||+|.+.
T Consensus 162 ~ivisSDAh~~~ 173 (212)
T 1v77_A 162 RRFLTSSAQEKW 173 (212)
T ss_dssp CEEEECCCSSGG
T ss_pred CEEEeCCCCChh
Confidence 999999999873
No 15
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=81.38 E-value=3.4 Score=44.85 Aligned_cols=55 Identities=25% Similarity=0.399 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHhhcCCeEeeeeEEEeEeccCCC----------CCCccEEEEEeccCCCCCChHHHHHHH
Q 020912 1 MSGIPEAIETARRFGMKIIPGVEISTIFCQRGS----------ESEEPVHILAYYSSCGPSKYEELENFL 60 (320)
Q Consensus 1 ~~Gv~ea~~~a~~~GI~vIpGVEIS~~~~~~~~----------~~g~~vHILGY~~d~~~~~~~~L~~~l 60 (320)
|.|+.++.++|++.||++|+|+|+++.+..... ......|++-|-- +...+.+++
T Consensus 157 ~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAk-----N~~Gy~nL~ 221 (1041)
T 3f2b_A 157 VQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQ-----NETGLKNLF 221 (1041)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEEC-----SHHHHHHHH
T ss_pred hhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeC-----CHHHHHHHH
Confidence 578999999999999999999999998642100 0123479998864 345555554
No 16
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=71.08 E-value=7.8 Score=34.03 Aligned_cols=42 Identities=12% Similarity=-0.018 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHcCccEEEEecCc-CcHHHHHHHHHHcCCceee
Q 020912 165 NPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 165 ~~~~~i~~l~~~GldGIEv~~~~-~~~~~~~~lA~~~~L~~tg 206 (320)
.+.+.++.+.++|+||||+..+. .+.+.+.++++++||-+++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEE
Confidence 35688889999999999998765 3678888999999998765
No 17
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=60.12 E-value=14 Score=33.67 Aligned_cols=65 Identities=9% Similarity=0.106 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCEEEecCCC-----CCCChHHHHHHHHHcCccEEEEecCcC-----cHHHHHHHHHHcCCcee
Q 020912 141 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVAYTDLADTYGLLKL 205 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaVlAHP~-----~~~~~~~~i~~l~~~GldGIEv~~~~~-----~~~~~~~lA~~~~L~~t 205 (320)
+.+.|++.|++|=-+..=..+ .....+..++..++.|++.||+....- +...+.+.++++|+.+.
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~ 131 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVL 131 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEe
Confidence 788899999988333222211 112457889999999999999998652 34567888899998663
No 18
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=60.11 E-value=15 Score=32.25 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHcCccEEEEecCc--CcHHHHHHHHHHcCCceee
Q 020912 165 NPAAIIRKLKDVGLHGLEVYRSD--GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 165 ~~~~~i~~l~~~GldGIEv~~~~--~~~~~~~~lA~~~~L~~tg 206 (320)
.....++.+.++|++|||++... .....+.++++++||-+++
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~ 82 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSA 82 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECE
T ss_pred CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEE
Confidence 34677777888888888887652 3466777888888887653
No 19
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=59.41 E-value=16 Score=30.88 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=38.0
Q ss_pred HHHHHHHHc-CCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcC--cHHHHHHHHHHcCCce
Q 020912 143 VAVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--KLVAYTDLADTYGLLK 204 (320)
Q Consensus 143 e~I~~I~~a-GGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~--~~~~~~~lA~~~~L~~ 204 (320)
+.|+.+++. .+++|.+|+.........++.+.++|.|+|=+..... ....+.+.++++|+.+
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~ 106 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQV 106 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeE
Confidence 466777766 4677777765433233446777777888876654332 2356667777777644
No 20
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=56.44 E-value=18 Score=31.40 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCccEEEEecCc-------CcHHHHHHHHHHcCCcee
Q 020912 167 AAIIRKLKDVGLHGLEVYRSD-------GKLVAYTDLADTYGLLKL 205 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~~~~-------~~~~~~~~lA~~~~L~~t 205 (320)
...++.+.++|++|||++... ...+.+.+.++++||-++
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 445555555555555554321 012344455555555443
No 21
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=55.32 E-value=21 Score=30.93 Aligned_cols=19 Identities=26% Similarity=0.569 Sum_probs=10.7
Q ss_pred hHHHHHHHHHcCccEEEEe
Q 020912 166 PAAIIRKLKDVGLHGLEVY 184 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~ 184 (320)
+...++.+.++|+++||++
T Consensus 24 ~~~~l~~~~~~G~~~vEl~ 42 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIY 42 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEeec
Confidence 3455555555666666654
No 22
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=54.47 E-value=13 Score=32.68 Aligned_cols=41 Identities=12% Similarity=0.087 Sum_probs=20.5
Q ss_pred hHHHHHHHHHcCccEEEEecCc---------CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD---------GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~---------~~~~~~~~lA~~~~L~~tg 206 (320)
....++.++++|++|||++.+. .....+.++++++||-+++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 66 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITM 66 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 3455555556666666654321 1223444555566665544
No 23
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=54.22 E-value=36 Score=29.31 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=9.0
Q ss_pred CCHHHHHHHHHHcC
Q 020912 139 PLAEVAVQLIHRTG 152 (320)
Q Consensus 139 ~~~~e~I~~I~~aG 152 (320)
.+++++++.++++|
T Consensus 19 ~~~~~~l~~~~~~G 32 (272)
T 2q02_A 19 LSIEAFFRLVKRLE 32 (272)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 45666666666665
No 24
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=53.84 E-value=11 Score=32.47 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=33.2
Q ss_pred hHHHHHHHHHcCccEEEEecCc-CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~-~~~~~~~~lA~~~~L~~tg 206 (320)
+.+.++.+.++|++|||+..+. .+...+.+.++++||-+++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 17 FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp GGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEE
Confidence 4577888889999999998654 3567788999999998764
No 25
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=49.27 E-value=39 Score=29.38 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=33.1
Q ss_pred hHHHHHHHHHcCccEEEEecCc------CcHHHHHHHHHHcCCceeec
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLGG 207 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~------~~~~~~~~lA~~~~L~~tgG 207 (320)
+...++.+.+.|++|||+.... .....+.++++++||-+++.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCC 66 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEe
Confidence 5678888889999999998543 13467788999999988764
No 26
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=48.79 E-value=18 Score=31.78 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=32.8
Q ss_pred hHHHHHHHHHcCccEEEEecCc------CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~------~~~~~~~~lA~~~~L~~tg 206 (320)
....++.+.++|++|||+.... ...+.+.++++++||-+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 5678888899999999998432 2356788999999998876
No 27
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=48.43 E-value=25 Score=33.54 Aligned_cols=23 Identities=17% Similarity=-0.078 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 97 ~~k~l~davH~~G~~i~~QL~H~Gr 121 (400)
T 4gbu_A 97 EWTKIFNAIHEKKSFVWVQLAVLGW 121 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceEEeeeecCc
Confidence 45678999999999765 578764
No 28
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=46.86 E-value=25 Score=31.56 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=33.0
Q ss_pred hHHHHHHHHHcCccEEEEec-----Cc-CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYR-----SD-GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~-----~~-~~~~~~~~lA~~~~L~~tg 206 (320)
....++.+.++|+++||++. .. .+.+.+.+.++++||-+++
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~ 77 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS 77 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE
Confidence 56788889999999999974 11 2577888999999998865
No 29
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=46.60 E-value=28 Score=30.67 Aligned_cols=43 Identities=19% Similarity=0.117 Sum_probs=33.2
Q ss_pred hHHHHHHHHHcCccEEEEecCc---CcHHHHHHHHHHcCCce-eecC
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLK-LGGS 208 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~---~~~~~~~~lA~~~~L~~-tgGS 208 (320)
....++.+.++|++|||+.... .....+.++++++||-+ +.++
T Consensus 43 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 43 LRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEEec
Confidence 3567788888999999998653 35678889999999987 4444
No 30
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=45.85 E-value=42 Score=29.72 Aligned_cols=14 Identities=14% Similarity=0.088 Sum_probs=7.1
Q ss_pred CCHHHHHHHHHHcC
Q 020912 139 PLAEVAVQLIHRTG 152 (320)
Q Consensus 139 ~~~~e~I~~I~~aG 152 (320)
.+++++++.++++|
T Consensus 36 ~~~~~~l~~a~~~G 49 (296)
T 2g0w_A 36 VSFPKRVKVAAENG 49 (296)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 34555555555554
No 31
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=44.09 E-value=70 Score=28.40 Aligned_cols=59 Identities=15% Similarity=0.067 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCc-CcHHHHHHHHHHc
Q 020912 141 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTY 200 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~-~~~~~~~~lA~~~ 200 (320)
..++.+.+.+.+=|+|+-..... ....+.+.+.+.|++.||+-... ...+...++.+++
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~~-~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~ 83 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNAE-DIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ 83 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSGG-GHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEEcCCHH-HHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 34688999999999999876432 23567788889999999996543 3445555666666
No 32
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=43.49 E-value=20 Score=31.45 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHcCCEEE-ecCCCCCCChHHHHHHHHHcCccEEEEecCcC-----------cHHHHHHHHHHcCCc
Q 020912 138 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLL 203 (320)
Q Consensus 138 ~~~~~e~I~~I~~aGGiaV-lAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~-----------~~~~~~~lA~~~~L~ 203 (320)
..+++++++.++++|--.| +.+++. ....+-+.+.+.|+.-.-++.+.. ..+...++|.+.|.-
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 105 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAP 105 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999974333 235543 444555556677765333322211 134566888888863
No 33
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=43.31 E-value=35 Score=29.33 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=8.7
Q ss_pred CCHHHHHHHHHHcC
Q 020912 139 PLAEVAVQLIHRTG 152 (320)
Q Consensus 139 ~~~~e~I~~I~~aG 152 (320)
.+++++++.++++|
T Consensus 14 ~~~~~~l~~~~~~G 27 (278)
T 1i60_A 14 SNLKLDLELCEKHG 27 (278)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC
Confidence 45666666666665
No 34
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=42.55 E-value=28 Score=31.64 Aligned_cols=41 Identities=22% Similarity=0.183 Sum_probs=32.2
Q ss_pred hHHHHHHHHHc-CccEEEEecCc---CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDV-GLHGLEVYRSD---GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~-GldGIEv~~~~---~~~~~~~~lA~~~~L~~tg 206 (320)
+.+.++.+.++ |++|||+..+. ...+.+.++++++||-+++
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEEE
Confidence 46788888888 99999997554 3567888999999997753
No 35
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=42.23 E-value=81 Score=32.90 Aligned_cols=77 Identities=12% Similarity=0.097 Sum_probs=52.6
Q ss_pred cCCCCCHHHHHHHHHHcCCEEEecCCCCCC-------ChHHHHHHHHHcCccEEEEecC-----cC-----c--H---HH
Q 020912 135 TGSEPLAEVAVQLIHRTGGLAVLAHPWALK-------NPAAIIRKLKDVGLHGLEVYRS-----DG-----K--L---VA 192 (320)
Q Consensus 135 ~~~~~~~~e~I~~I~~aGGiaVlAHP~~~~-------~~~~~i~~l~~~GldGIEv~~~-----~~-----~--~---~~ 192 (320)
|...++++|+++-.++-| |=++-|-.... ..+..++.+.+.|+.||=+=+= +. + . ..
T Consensus 414 p~pd~Dl~eL~~YA~sKG-V~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~ 492 (738)
T 2d73_A 414 PYPDFDVKEIHRYAARKG-IKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLY 492 (738)
T ss_dssp BCTTCCHHHHHHHHHHTT-CEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhCC-CEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHH
Confidence 345577999999999876 54444433222 1346777788999999998432 21 2 1 34
Q ss_pred HHHHHHHcCCceeecCCCCCCCCC
Q 020912 193 YTDLADTYGLLKLGGSDYHGRGGH 216 (320)
Q Consensus 193 ~~~lA~~~~L~~tgGSD~Hg~~~~ 216 (320)
+.+-|.+|+|++ ||||+.+|
T Consensus 493 i~~~AA~~~LmV----nfHg~~kP 512 (738)
T 2d73_A 493 AVKKAADYKIMV----NAHEATRP 512 (738)
T ss_dssp HHHHHHHTTCEE----EETTSCCC
T ss_pred HHHHHHHcCcEE----EccCCcCC
Confidence 557778999999 99998655
No 36
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=42.12 E-value=14 Score=31.92 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=18.4
Q ss_pred HHHHHHHHHcCccEEEEecCc---CcHHHHHHHHHHcCCce
Q 020912 167 AAIIRKLKDVGLHGLEVYRSD---GKLVAYTDLADTYGLLK 204 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~~~~---~~~~~~~~lA~~~~L~~ 204 (320)
...++.+.++|++|||++... ...+.+.+.++++||-+
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~ 61 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKL 61 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCce
Confidence 344555555555555554321 12344455555555544
No 37
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=42.10 E-value=63 Score=28.00 Aligned_cols=77 Identities=17% Similarity=0.037 Sum_probs=50.9
Q ss_pred HHHhhcCCCC-cccc-CCCCCHHHHHHHHHHcCCEEEecCCCCC---CChHHHHHHHHH-cCccEEEEecCcCcHHHHHH
Q 020912 122 FARYLYDGGP-AYST-GSEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKD-VGLHGLEVYRSDGKLVAYTD 195 (320)
Q Consensus 122 f~~~L~~g~p-~yv~-~~~~~~~e~I~~I~~aGGiaVlAHP~~~---~~~~~~i~~l~~-~GldGIEv~~~~~~~~~~~~ 195 (320)
+++.+..... .|+- .+-..+.++++.++++|=.+++ ||+.. ......+..|.. .+.|||=-.+ ....+
T Consensus 22 l~~al~s~~~~ifll~g~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk-----~~~i~ 95 (192)
T 3kts_A 22 MEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIISTR-----GNAIM 95 (192)
T ss_dssp HHHHTTSSCCEEEECSEETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEESC-----HHHHH
T ss_pred HHHHHcCCCCEEEEecCcHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEeCc-----HHHHH
Confidence 4666655432 2332 3446799999999999988877 99853 233456666665 3788863332 34667
Q ss_pred HHHHcCCce
Q 020912 196 LADTYGLLK 204 (320)
Q Consensus 196 lA~~~~L~~ 204 (320)
.|++.||..
T Consensus 96 ~Ak~~gL~t 104 (192)
T 3kts_A 96 KAKQHKMLA 104 (192)
T ss_dssp HHHHTTCEE
T ss_pred HHHHCCCeE
Confidence 888888765
No 38
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=40.71 E-value=36 Score=29.78 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCccEEEEecCcC------cHHHHHHHHHHcCCceeec-CCCCC
Q 020912 167 AAIIRKLKDVGLHGLEVYRSDG------KLVAYTDLADTYGLLKLGG-SDYHG 212 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~~~~~------~~~~~~~lA~~~~L~~tgG-SD~Hg 212 (320)
.+.++.+.++|++|||+..... ....+.+.++++||-+++. +.+++
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g 76 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDG 76 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCC
Confidence 4677788899999999986431 2567889999999977654 34444
No 39
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=40.62 E-value=58 Score=29.03 Aligned_cols=42 Identities=29% Similarity=0.379 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHcCccEEEEec-CcC-----------cHHHHHHHHHHcCCceee
Q 020912 165 NPAAIIRKLKDVGLHGLEVYR-SDG-----------KLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 165 ~~~~~i~~l~~~GldGIEv~~-~~~-----------~~~~~~~lA~~~~L~~tg 206 (320)
.....++.+.++|++|||+.. +.. ....+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 356788888899999999974 211 135778999999998764
No 40
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=39.74 E-value=36 Score=29.93 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHcCccEEEEecCcC------------cHHHHHHHHHHcCCceee
Q 020912 165 NPAAIIRKLKDVGLHGLEVYRSDG------------KLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 165 ~~~~~i~~l~~~GldGIEv~~~~~------------~~~~~~~lA~~~~L~~tg 206 (320)
.+...++.+.+.|++|||+..... ....+.++++++||-+++
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 356788888899999999975421 235678889999998764
No 41
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=38.81 E-value=38 Score=30.47 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=29.2
Q ss_pred hHHHHHHHHHcCccEEEEecC--------cC--------cHHHHHHHHHHcCCceeec
Q 020912 166 PAAIIRKLKDVGLHGLEVYRS--------DG--------KLVAYTDLADTYGLLKLGG 207 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~--------~~--------~~~~~~~lA~~~~L~~tgG 207 (320)
+...++.+.++|+++||++.. .. ..+.+.++++++||-+++.
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~ 95 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSS 95 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEe
Confidence 346777777888888888732 11 4567778888888876543
No 42
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=38.32 E-value=53 Score=30.35 Aligned_cols=22 Identities=18% Similarity=0.149 Sum_probs=15.9
Q ss_pred HHHHHHHHHHcCCE--EEecCCCC
Q 020912 141 AEVAVQLIHRTGGL--AVLAHPWA 162 (320)
Q Consensus 141 ~~e~I~~I~~aGGi--aVlAHP~~ 162 (320)
...+++.||+.|+. +=|.|.++
T Consensus 85 ~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 85 FAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEecCCCc
Confidence 46778889999985 34778653
No 43
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=37.91 E-value=52 Score=30.22 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCEEEecCCC-----CCCChHHHHHHHHHcCccEEEEecCcC-----cHHHHHHHHHHcCCce
Q 020912 141 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDG-----KLVAYTDLADTYGLLK 204 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaVlAHP~-----~~~~~~~~i~~l~~~GldGIEv~~~~~-----~~~~~~~lA~~~~L~~ 204 (320)
+.+.|++.|++|=-+..=..+ .....+..++..++.|++.||+....- +...+.+.|++. +.+
T Consensus 82 l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~V 154 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLV 154 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEE
T ss_pred HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEE
Confidence 999999999998333322211 112457889999999999999998752 234566666666 533
No 44
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=37.25 E-value=1.5e+02 Score=25.73 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=44.9
Q ss_pred CCHHHHHHHHHHcCCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcC-cHHHHHHHHHHc
Q 020912 139 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY 200 (320)
Q Consensus 139 ~~~~e~I~~I~~aGGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~-~~~~~~~lA~~~ 200 (320)
.+..+.++.+...+=++|+-.... .....+++.+.+.|++.||+-.... ..+.+.++++++
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~ 66 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDNA-DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANR 66 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHCCeEEEEeCCCH-HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhC
Confidence 466788899999999999976432 2234678888899999999986543 345556688877
No 45
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=37.05 E-value=37 Score=31.83 Aligned_cols=23 Identities=30% Similarity=0.242 Sum_probs=16.6
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceeeccccccc
Confidence 34678899999998644 567664
No 46
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=36.62 E-value=65 Score=27.85 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHcCCEEEecCCCCCC---ChHHHHHHHHHcCccEEEEecCcCcHHHHHHHHHHcCCce
Q 020912 139 PLAEVAVQLIHRTGGLAVLAHPWALK---NPAAIIRKLKDVGLHGLEVYRSDGKLVAYTDLADTYGLLK 204 (320)
Q Consensus 139 ~~~~e~I~~I~~aGGiaVlAHP~~~~---~~~~~i~~l~~~GldGIEv~~~~~~~~~~~~lA~~~~L~~ 204 (320)
..+.++++.++++ |..|+-||+... .....+..|...+.|||=--. ......|+++||..
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsTk-----~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITIK-----PKNYVVAKKNGIPA 105 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEESC-----HHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcCc-----HHHHHHHHHcCCEE
Confidence 4689999999999 799999998532 234555555556888864332 34678888888866
No 47
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=36.50 E-value=42 Score=31.25 Aligned_cols=23 Identities=26% Similarity=0.173 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 84 GLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCC
Confidence 45788999999999755 467653
No 48
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=36.47 E-value=89 Score=32.03 Aligned_cols=78 Identities=18% Similarity=0.223 Sum_probs=52.2
Q ss_pred CCCCCHHHHHHHHHHcCCEEEe-cCCCCC-CChHHHHHHHHHcCccEEEEec-Cc-Cc--H---HHHHHHHHHcCCceee
Q 020912 136 GSEPLAEVAVQLIHRTGGLAVL-AHPWAL-KNPAAIIRKLKDVGLHGLEVYR-SD-GK--L---VAYTDLADTYGLLKLG 206 (320)
Q Consensus 136 ~~~~~~~e~I~~I~~aGGiaVl-AHP~~~-~~~~~~i~~l~~~GldGIEv~~-~~-~~--~---~~~~~lA~~~~L~~tg 206 (320)
....+++++++-.|+-|=-.++ .|...+ ...+..++.+.+.|++||=+-+ .. .+ . ....+-|.+|+|++
T Consensus 344 ~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V-- 421 (641)
T 3a24_A 344 VKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLIL-- 421 (641)
T ss_dssp CTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEE--
T ss_pred CCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEE--
Confidence 3457899999999998732333 222212 2345688888999999999854 22 22 1 34456778999996
Q ss_pred cCCCCCCCCCC
Q 020912 207 GSDYHGRGGHG 217 (320)
Q Consensus 207 GSD~Hg~~~~~ 217 (320)
||||+.+|.
T Consensus 422 --~fHg~~~P~ 430 (641)
T 3a24_A 422 --DLHGTHKPA 430 (641)
T ss_dssp --EECSCCCCT
T ss_pred --EcCCCcCCC
Confidence 999986553
No 49
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=36.16 E-value=55 Score=30.95 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCCEEE--ecCCC
Q 020912 141 AEVAVQLIHRTGGLAV--LAHPW 161 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaV--lAHP~ 161 (320)
...+++.||+.|+.++ |.|++
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~G 115 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVG 115 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCT
T ss_pred HHHHHHHHHhcCCeEEEEeecCC
Confidence 4567778888888544 56744
No 50
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=35.89 E-value=45 Score=28.88 Aligned_cols=40 Identities=5% Similarity=0.137 Sum_probs=30.2
Q ss_pred ChHHHHHHHHHcCccEEEEecCc-----------CcHHHHHHHHHHcCCce
Q 020912 165 NPAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGLLK 204 (320)
Q Consensus 165 ~~~~~i~~l~~~GldGIEv~~~~-----------~~~~~~~~lA~~~~L~~ 204 (320)
.+...++.+.++|++|||++... .....+.+.++++||-+
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 45578888899999999997421 13467788999999973
No 51
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=35.47 E-value=56 Score=28.21 Aligned_cols=41 Identities=5% Similarity=0.171 Sum_probs=30.6
Q ss_pred CChHHHHHHHHHcCccEEEEecC--c---------CcHHHHHHHHHHcCCce
Q 020912 164 KNPAAIIRKLKDVGLHGLEVYRS--D---------GKLVAYTDLADTYGLLK 204 (320)
Q Consensus 164 ~~~~~~i~~l~~~GldGIEv~~~--~---------~~~~~~~~lA~~~~L~~ 204 (320)
..+...++.+.+.|++|||++.. . .....+.+.++++||-+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 34567888889999999999531 1 12467788899999973
No 52
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=35.36 E-value=57 Score=30.80 Aligned_cols=23 Identities=22% Similarity=0.154 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCEEEEEeccCcc
Confidence 34677888888888644 566553
No 53
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=35.10 E-value=65 Score=27.81 Aligned_cols=41 Identities=15% Similarity=0.313 Sum_probs=29.8
Q ss_pred hHHHHHHHHHcCccEEEEecCc-----------CcHHHHHHHHHHcCC-ceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD-----------GKLVAYTDLADTYGL-LKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~-----------~~~~~~~~lA~~~~L-~~tg 206 (320)
....++...+.|+|+||++... .....+.++++++|| .++.
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 68 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVI 68 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 4567788888999999997521 124677888899999 5543
No 54
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=34.56 E-value=60 Score=30.64 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 88 ~~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 88 GWRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEeeccCCc
Confidence 34678888888888654 466653
No 55
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=34.49 E-value=27 Score=30.22 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=21.1
Q ss_pred HHHHHHHHHcCccEEEEecCc-------CcHHHHHHHHHHcCCcee
Q 020912 167 AAIIRKLKDVGLHGLEVYRSD-------GKLVAYTDLADTYGLLKL 205 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~~~~-------~~~~~~~~lA~~~~L~~t 205 (320)
.+.++.+.++|++|||+.... .....+.+.++++||-++
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred HHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 455555666666666665321 123455566666666553
No 56
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=33.36 E-value=1e+02 Score=27.94 Aligned_cols=12 Identities=8% Similarity=-0.017 Sum_probs=6.5
Q ss_pred HHHHHHHHhCCC
Q 020912 72 KDMILKLNKLKL 83 (320)
Q Consensus 72 ~~ii~~L~~~G~ 83 (320)
.++++.|.+.|.
T Consensus 37 ~~~~~~l~~~Ga 48 (271)
T 3nav_A 37 LAIMQTLIDAGA 48 (271)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 455666665443
No 57
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=32.52 E-value=52 Score=31.72 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 56788999999998755 477764
No 58
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=32.07 E-value=45 Score=28.83 Aligned_cols=37 Identities=19% Similarity=0.111 Sum_probs=17.9
Q ss_pred HHHHHHHcCccEEEEecCc----CcHHHHHHHHHHcCCcee
Q 020912 169 IIRKLKDVGLHGLEVYRSD----GKLVAYTDLADTYGLLKL 205 (320)
Q Consensus 169 ~i~~l~~~GldGIEv~~~~----~~~~~~~~lA~~~~L~~t 205 (320)
.++...++|++|||++... .....+.+.++++||-++
T Consensus 28 ~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECV 68 (264)
T ss_dssp GHHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCEEE
Confidence 4444555566666654211 134445555555555443
No 59
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=31.62 E-value=69 Score=29.93 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEeeehhhccC
Confidence 45678899999999755 467654
No 60
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=30.80 E-value=40 Score=30.00 Aligned_cols=42 Identities=21% Similarity=0.311 Sum_probs=32.4
Q ss_pred hHHHHHHHHHcCccEEEEecCc------CcHHHHHHHHHHcCCceeecC
Q 020912 166 PAAIIRKLKDVGLHGLEVYRSD------GKLVAYTDLADTYGLLKLGGS 208 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~~------~~~~~~~~lA~~~~L~~tgGS 208 (320)
... ++.+.+.|++|||+.... .....+.++++++||-+++.+
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEec
Confidence 456 888889999999997532 235677889999999887743
No 61
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=30.75 E-value=1.2e+02 Score=26.75 Aligned_cols=41 Identities=12% Similarity=0.078 Sum_probs=31.0
Q ss_pred hHHHHHHHHHcCccEEEEecC--c---------CcHHHHHHHHHHcCC-ceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRS--D---------GKLVAYTDLADTYGL-LKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~--~---------~~~~~~~~lA~~~~L-~~tg 206 (320)
+...++.+.+.|+|+||++.. . .....+.++++++|| .++.
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 72 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVV 72 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 567888888999999999521 1 245778899999999 4553
No 62
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=30.06 E-value=27 Score=32.27 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHcCCEEEecCCCCC---CChHHHHHHHHHcCccEEEEecC--------------cC-----cHHHHHHH
Q 020912 139 PLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDVGLHGLEVYRS--------------DG-----KLVAYTDL 196 (320)
Q Consensus 139 ~~~~e~I~~I~~aGGiaVlAHP~~~---~~~~~~i~~l~~~GldGIEv~~~--------------~~-----~~~~~~~l 196 (320)
+..+-+-+.+-....++|+|=.+.. .....+++.+++.|+.|+ ..|| .+ +...+.+.
T Consensus 80 iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~ 158 (286)
T 2p10_A 80 IVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAE 158 (286)
T ss_dssp HHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHH
Confidence 3344444566666788888863322 235678899999999999 8888 21 23566789
Q ss_pred HHHcCCceee
Q 020912 197 ADTYGLLKLG 206 (320)
Q Consensus 197 A~~~~L~~tg 206 (320)
|++.||+.+.
T Consensus 159 A~~~gL~Ti~ 168 (286)
T 2p10_A 159 AHKLDLLTTP 168 (286)
T ss_dssp HHHTTCEECC
T ss_pred HHHCCCeEEE
Confidence 9999997754
No 63
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=29.85 E-value=77 Score=28.45 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=31.0
Q ss_pred HHHHHHHHcCccEEEEecCc----------CcHHHHHHHHHHcCCc---eeec
Q 020912 168 AIIRKLKDVGLHGLEVYRSD----------GKLVAYTDLADTYGLL---KLGG 207 (320)
Q Consensus 168 ~~i~~l~~~GldGIEv~~~~----------~~~~~~~~lA~~~~L~---~tgG 207 (320)
..++.+.++|++|||+.... .....+.++++++||- +++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEE
Confidence 67888889999999997532 1235678889999998 7764
No 64
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=29.31 E-value=70 Score=32.37 Aligned_cols=23 Identities=39% Similarity=0.410 Sum_probs=16.6
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
...++++.||+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 45678899999998644 577553
No 65
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=29.30 E-value=83 Score=28.08 Aligned_cols=59 Identities=14% Similarity=0.240 Sum_probs=28.0
Q ss_pred HHHHHHHHcC-CEEEecCCCCCCChHHHHHHHHHcCccEEEEecCc-CcHHHHHHHHHHcCC
Q 020912 143 VAVQLIHRTG-GLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD-GKLVAYTDLADTYGL 202 (320)
Q Consensus 143 e~I~~I~~aG-GiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~-~~~~~~~~lA~~~~L 202 (320)
++|+.|+... -+++-+|-.- .+++..++.+.++|.|.|-+..-. .......+.++++|+
T Consensus 75 ~~v~~lr~~~p~~~ldvHLmv-~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~ 135 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLMV-KPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGI 135 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEEC-SSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTS
T ss_pred HHHHHHHHhCCCCeEEEEEee-CCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCC
Confidence 3555555554 4555555431 233445555555566665544221 233444445555544
No 66
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=28.79 E-value=2.2e+02 Score=25.69 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=56.1
Q ss_pred CHHHHHH---HhhcCCCCc-cccCCCCCHHHHHHHHHHcCCEEEecCCCCCC-------------Ch----HHHHHH---
Q 020912 117 NLKQAFA---RYLYDGGPA-YSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-------------NP----AAIIRK--- 172 (320)
Q Consensus 117 ~~~~af~---~~L~~g~p~-yv~~~~~~~~e~I~~I~~aGGiaVlAHP~~~~-------------~~----~~~i~~--- 172 (320)
+..+++. +++..|--+ .+.. .....+.|+.+.++| |+|.+|.+... .. +.++++
T Consensus 92 ~~~~a~~~a~rl~kaGa~aVklEg-g~e~~~~I~al~~ag-ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a 169 (264)
T 1m3u_A 92 TPEQAFENAATVMRAGANMVKIEG-GEWLVETVQMLTERA-VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALA 169 (264)
T ss_dssp SHHHHHHHHHHHHHTTCSEEECCC-SGGGHHHHHHHHHTT-CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC-cHHHHHHHHHHHHCC-CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHH
Confidence 5555554 666543222 2221 123467788887765 99999976321 11 234433
Q ss_pred HHHcCccEEEEecCcCcHHHHHHHHHHcCCceee---cCCCCC
Q 020912 173 LKDVGLHGLEVYRSDGKLVAYTDLADTYGLLKLG---GSDYHG 212 (320)
Q Consensus 173 l~~~GldGIEv~~~~~~~~~~~~lA~~~~L~~tg---GSD~Hg 212 (320)
+.++|-++|-+-... .....+++++..++..| |.++.|
T Consensus 170 ~~eAGA~~ivlE~vp--~~~a~~it~~l~iP~igIGag~~~dg 210 (264)
T 1m3u_A 170 LEAAGAQLLVLECVP--VELAKRITEALAIPVIGIGAGNVTDG 210 (264)
T ss_dssp HHHHTCCEEEEESCC--HHHHHHHHHHCSSCEEEESSCTTSSE
T ss_pred HHHCCCcEEEEecCC--HHHHHHHHHhCCCCEEEeCCCCCCCc
Confidence 557899998776533 35677888999987765 666665
No 67
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=28.76 E-value=1e+02 Score=29.65 Aligned_cols=23 Identities=17% Similarity=0.163 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~~ 162 (320)
....+++.||+.|+.++ |.|+++
T Consensus 93 ~~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 93 AWKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 34678888999998755 466653
No 68
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=28.50 E-value=2.8e+02 Score=25.52 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHc-CCEEEec--CCCCCCChHHHHHHHHHcCccEEEEecCcC---cHHHHHHHHHHcCCceeec-CCCC
Q 020912 139 PLAEVAVQLIHRT-GGLAVLA--HPWALKNPAAIIRKLKDVGLHGLEVYRSDG---KLVAYTDLADTYGLLKLGG-SDYH 211 (320)
Q Consensus 139 ~~~~e~I~~I~~a-GGiaVlA--HP~~~~~~~~~i~~l~~~GldGIEv~~~~~---~~~~~~~lA~~~~L~~tgG-SD~H 211 (320)
.+..|.++.+++. .++.+.+ .|.+. ....++...+.|+|++=++.+.+ ......++|+++|+-+.+. +|++
T Consensus 67 ~~~~e~l~~i~~~~~~~~i~~l~~p~~~--~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~ 144 (345)
T 1nvm_A 67 HTDLEYIEAVAGEISHAQIATLLLPGIG--SVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSH 144 (345)
T ss_dssp SCHHHHHHHHHTTCSSSEEEEEECBTTB--CHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTT
T ss_pred CCHHHHHHHHHhhCCCCEEEEEecCCcc--cHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCC
Confidence 3566777666554 3433332 34321 24566777777888887775442 4456677788888755544 5665
Q ss_pred C
Q 020912 212 G 212 (320)
Q Consensus 212 g 212 (320)
.
T Consensus 145 ~ 145 (345)
T 1nvm_A 145 M 145 (345)
T ss_dssp S
T ss_pred C
Confidence 3
No 69
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=28.08 E-value=78 Score=28.17 Aligned_cols=39 Identities=18% Similarity=0.090 Sum_probs=28.6
Q ss_pred HHHHHHHHcCccEEEEecCcC-----------cHHHHHHHHHHcCCceee
Q 020912 168 AIIRKLKDVGLHGLEVYRSDG-----------KLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 168 ~~i~~l~~~GldGIEv~~~~~-----------~~~~~~~lA~~~~L~~tg 206 (320)
..+..+.++|+||||++.... ..+.+.+.++++||-+++
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 345556789999999975421 346678889999998765
No 70
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=27.42 E-value=1.5e+02 Score=26.77 Aligned_cols=61 Identities=13% Similarity=0.115 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHcCCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcCc-----------------HHHHHHHHHHcCC
Q 020912 140 LAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGK-----------------LVAYTDLADTYGL 202 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~~-----------------~~~~~~lA~~~~L 202 (320)
+.+++++.+.+..++.+.+|- .+ ...++...+.|++.|-++.+..+ .....++|+++|+
T Consensus 63 d~~~~~~~~~~~~~~~~~~l~---~~-~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~ 138 (302)
T 2ftp_A 63 GSAEVFAGIRQRPGVTYAALA---PN-LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQV 138 (302)
T ss_dssp THHHHHHHSCCCTTSEEEEEC---CS-HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHhhhcCCCEEEEEe---CC-HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC
Confidence 456666666666788887775 12 35677778899999998654421 2456789999998
Q ss_pred ce
Q 020912 203 LK 204 (320)
Q Consensus 203 ~~ 204 (320)
-+
T Consensus 139 ~V 140 (302)
T 2ftp_A 139 RV 140 (302)
T ss_dssp EE
T ss_pred eE
Confidence 77
No 71
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=26.81 E-value=76 Score=28.56 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=46.4
Q ss_pred HHHHHHHhhcCCCCccccCCCCCHHHHHHHHHHcCC-EEEecCCCCCCC------hHHHHHHHHHcCccEEEEec-CcCc
Q 020912 118 LKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGG-LAVLAHPWALKN------PAAIIRKLKDVGLHGLEVYR-SDGK 189 (320)
Q Consensus 118 ~~~af~~~L~~g~p~yv~~~~~~~~e~I~~I~~aGG-iaVlAHP~~~~~------~~~~i~~l~~~GldGIEv~~-~~~~ 189 (320)
++.+-.+=|.+| .+++++++++++.-. ++++- +.|.| .+.+++.+++.|+||+=+-. |.++
T Consensus 61 Iq~a~~rAL~~g---------~~~~~~~~~~~~~r~~~Pivl--m~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE 129 (252)
T 3tha_A 61 IADAAKIALDQG---------VDIHSVFELLARIKTKKALVF--MVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEE 129 (252)
T ss_dssp HHHHHHHHHHTT---------CCHHHHHHHHHHCCCSSEEEE--ECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGG
T ss_pred HHHHHHHHHHCC---------CCHHHHHHHHHHHhcCCCEEE--EeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHH
Confidence 356666666665 467777787777643 33321 11222 35677788888888875543 3345
Q ss_pred HHHHHHHHHHcCC
Q 020912 190 LVAYTDLADTYGL 202 (320)
Q Consensus 190 ~~~~~~lA~~~~L 202 (320)
...+.+.|+++||
T Consensus 130 ~~~~~~~~~~~Gl 142 (252)
T 3tha_A 130 SDDLIKECERYNI 142 (252)
T ss_dssp CHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 5677888888886
No 72
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.19 E-value=69 Score=32.23 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHcCCE--EEecCCCC
Q 020912 140 LAEVAVQLIHRTGGL--AVLAHPWA 162 (320)
Q Consensus 140 ~~~e~I~~I~~aGGi--aVlAHP~~ 162 (320)
....+++.+|+.|+. +=|.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 456778889999985 34778543
No 73
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=25.95 E-value=1.9e+02 Score=25.14 Aligned_cols=59 Identities=19% Similarity=0.141 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcC-cHHHHHHHHHHc
Q 020912 141 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTY 200 (320)
Q Consensus 141 ~~e~I~~I~~aGGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~-~~~~~~~lA~~~ 200 (320)
..+.++.+...+=++|+-.... .....+++.+.+.|++-||+-.... ..+.+.++++++
T Consensus 16 ~~~~~~~l~~~~ii~V~r~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~ 75 (225)
T 1mxs_A 16 AARIDAICEKARILPVITIARE-EDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQR 75 (225)
T ss_dssp HHHHHHHHHHHSEEEEECCSCG-GGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEEeCCCH-HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhC
Confidence 4567788888998899876532 2234677888899999999985443 234455577776
No 74
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=25.74 E-value=2.9e+02 Score=25.07 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHcCCEEEecCCCCCC-------------C---hHHHHHH---HHHcCccEEEEecCcCcHHHHHHHHHHc
Q 020912 140 LAEVAVQLIHRTGGLAVLAHPWALK-------------N---PAAIIRK---LKDVGLHGLEVYRSDGKLVAYTDLADTY 200 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaVlAHP~~~~-------------~---~~~~i~~---l~~~GldGIEv~~~~~~~~~~~~lA~~~ 200 (320)
...+.|+.+.++ ||+|.+|.+... . .+.++++ +.++|-++|-+-... .....+++++.
T Consensus 119 e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp--~~~a~~it~~l 195 (275)
T 1o66_A 119 WMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECVL--AELAKKVTETV 195 (275)
T ss_dssp GGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEESCC--HHHHHHHHHHC
T ss_pred HHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecCC--HHHHHHHHHhC
Confidence 345677777766 589999976210 0 1344444 557899998776533 35677889999
Q ss_pred CCceee---cCCCCC
Q 020912 201 GLLKLG---GSDYHG 212 (320)
Q Consensus 201 ~L~~tg---GSD~Hg 212 (320)
.++..| |.++-|
T Consensus 196 ~iP~igIGaG~~~dg 210 (275)
T 1o66_A 196 SCPTIGIGAGADCDG 210 (275)
T ss_dssp SSCEEEESSCSCSSE
T ss_pred CCCEEEECCCCCCCc
Confidence 987765 666665
No 75
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=25.64 E-value=1e+02 Score=29.34 Aligned_cols=14 Identities=21% Similarity=0.536 Sum_probs=10.6
Q ss_pred HHHcCccEEEEecC
Q 020912 173 LKDVGLHGLEVYRS 186 (320)
Q Consensus 173 l~~~GldGIEv~~~ 186 (320)
.+++|+||||+.-.
T Consensus 180 a~~AGfDgVEIh~a 193 (402)
T 2hsa_B 180 AIEAGFDGIEIHGA 193 (402)
T ss_dssp HHHTTCSEEEEECC
T ss_pred HHHcCCCEEEECCc
Confidence 44679999998753
No 76
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=25.42 E-value=79 Score=32.33 Aligned_cols=22 Identities=23% Similarity=0.111 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHcCCEEE--ecCCC
Q 020912 140 LAEVAVQLIHRTGGLAV--LAHPW 161 (320)
Q Consensus 140 ~~~e~I~~I~~aGGiaV--lAHP~ 161 (320)
....+++.||+.|+.++ |.|.+
T Consensus 85 ~~~~~~~~vh~~g~~i~~Ql~h~G 108 (729)
T 1o94_A 85 NLKAMTDEVHKYGALAGVELWYGG 108 (729)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCG
T ss_pred HHHHHHHHHHhCCCeEEEEecCCC
Confidence 34667788898888543 67743
No 77
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=24.90 E-value=44 Score=24.48 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhC-----CCCCCHHHHHHHhCCCCCCCHHHH---HHHHHHcCCCC
Q 020912 70 RAKDMILKLNKL-----KLPLKWEHVAKIAGKGVAPGRLHV---ARAMVEAGHVE 116 (320)
Q Consensus 70 r~~~ii~~L~~~-----G~~i~~eev~~~a~~~~~~gR~hi---A~~Lv~~G~~~ 116 (320)
|-++|++.+++. |++++..|+.+..+- +..-+ ..+|.++|++.
T Consensus 5 r~~~IL~~I~~~i~~~~g~~psv~EIa~~lgv----S~~TVrr~L~~Le~kG~I~ 55 (77)
T 2jt1_A 5 IVTKIISIVQERQNMDDGAPVKTRDIADAAGL----SIYQVRLYLEQLHDVGVLE 55 (77)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEHHHHHHHHTC----CHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHhhccCCCcCHHHHHHHHCC----CHHHHHHHHHHHHHCCcEE
Confidence 334556666555 899999999877652 32222 34566777653
No 78
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=24.65 E-value=1.1e+02 Score=30.21 Aligned_cols=57 Identities=23% Similarity=0.407 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCccEEEEe--cC-------cC----cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccC-ccCC
Q 020912 167 AAIIRKLKDVGLHGLEVY--RS-------DG----KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGS-VKLP 227 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~--~~-------~~----~~~~~~~lA~~~~L~~tgGSD~Hg~~~~~~~~lG~-~~~p 227 (320)
...++.|+.+|+|||+|- .+ .. --+.+.+++++.||-.-.==-||..+. .+|. +.||
T Consensus 36 ~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq~vmSFHqCGg----NVGD~~~IP 106 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQAIMSFHQCGG----NVGDIVNIP 106 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCC----STTCSCCBC
T ss_pred HHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEEEeeecCC----CCCCccccc
Confidence 456788999999999983 32 11 136777999999997655556998753 4664 4555
No 79
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=24.43 E-value=1.6e+02 Score=25.38 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=41.2
Q ss_pred HHHHHHHHcCCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcC-cHHHHHHHHHHcC
Q 020912 143 VAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTYG 201 (320)
Q Consensus 143 e~I~~I~~aGGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~-~~~~~~~lA~~~~ 201 (320)
+.++.+...+=++|+-.... .....+++.+.+.|++-||+-.... ..+.+.++++++.
T Consensus 8 ~~~~~l~~~~~i~v~r~~~~-~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~ 66 (214)
T 1wbh_A 8 SAESILTTGPVVPVIVVKKL-EHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP 66 (214)
T ss_dssp CHHHHHHSCSEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHCCEEEEEECCCH-HHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc
Confidence 36677888888999987543 2234678888899999999986543 3445556777773
No 80
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=22.38 E-value=34 Score=29.37 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=13.8
Q ss_pred hcCCeEeeeeEEEeEe
Q 020912 13 RFGMKIIPGVEISTIF 28 (320)
Q Consensus 13 ~~GI~vIpGVEIS~~~ 28 (320)
..||+++||+|+++..
T Consensus 63 ~~~i~v~~G~Ei~~~~ 78 (245)
T 1m65_A 63 VDGVGILRGIEANIKN 78 (245)
T ss_dssp ETTEEEEEEEEEEBCS
T ss_pred cCCCeEEEEEEeeeeC
Confidence 3599999999999964
No 81
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=22.37 E-value=1.3e+02 Score=29.99 Aligned_cols=57 Identities=28% Similarity=0.456 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCccEEEEe--cC-------cC----cHHHHHHHHHHcCCceeecCCCCCCCCCCCccccC-ccCC
Q 020912 167 AAIIRKLKDVGLHGLEVY--RS-------DG----KLVAYTDLADTYGLLKLGGSDYHGRGGHGESELGS-VKLP 227 (320)
Q Consensus 167 ~~~i~~l~~~GldGIEv~--~~-------~~----~~~~~~~lA~~~~L~~tgGSD~Hg~~~~~~~~lG~-~~~p 227 (320)
...++.|+.+|+|||+|- .. .. --+.+.+++++.||-.-.==-||..+. .+|. +.||
T Consensus 34 ~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKlq~vmSFHqCGg----NVGD~~~IP 104 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGG----NVGDAVNIP 104 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCC----STTCSCCBC
T ss_pred HHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEEEeeecCC----CCCCccccc
Confidence 456778999999999983 32 11 136777899999997655556998753 4664 4555
No 82
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=21.35 E-value=1.1e+02 Score=25.89 Aligned_cols=68 Identities=10% Similarity=0.057 Sum_probs=38.1
Q ss_pred HHHHHHHHHcCCEEEecCCCCCC-------ChHHHHHHHHHcCccEEEEecCcC-cHHHHHHHHHHcC-CceeecCCC
Q 020912 142 EVAVQLIHRTGGLAVLAHPWALK-------NPAAIIRKLKDVGLHGLEVYRSDG-KLVAYTDLADTYG-LLKLGGSDY 210 (320)
Q Consensus 142 ~e~I~~I~~aGGiaVlAHP~~~~-------~~~~~i~~l~~~GldGIEv~~~~~-~~~~~~~lA~~~~-L~~tgGSD~ 210 (320)
.+.++.+++.||+++++.-.... ..+.+...-.+.|++|+-+..... ..+.+.+.+. .+ ++++||=..
T Consensus 90 ~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~~~-~~~~iv~gGI~~ 166 (208)
T 2czd_A 90 RDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDRLK-EGIKILAPGIGA 166 (208)
T ss_dssp HHHHHHHHTTSEEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHHHHHSC-TTCEEEECCCCS
T ss_pred HHHHHHHHHhCCcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhCC-CCeEEEECCCCC
Confidence 46799999999999998732110 112334444577999996554322 2334444432 12 355665443
No 83
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=21.31 E-value=82 Score=29.35 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=30.4
Q ss_pred hHHHHHHHHHcCccEEEEe----cCcC--------cHHHHHHHHHHcCCcee
Q 020912 166 PAAIIRKLKDVGLHGLEVY----RSDG--------KLVAYTDLADTYGLLKL 205 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~----~~~~--------~~~~~~~lA~~~~L~~t 205 (320)
+...++.+.+.|++|||+. .+.. ....+.++++++||-++
T Consensus 35 ~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~ 86 (387)
T 1bxb_A 35 PVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVP 86 (387)
T ss_dssp HHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCC
T ss_pred HHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEE
Confidence 4577788888899999997 4431 34677889999999774
No 84
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=20.16 E-value=63 Score=30.26 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=31.1
Q ss_pred hHHHHHHHHHcCccEEEEecC----c--------CcHHHHHHHHHHcCCceee
Q 020912 166 PAAIIRKLKDVGLHGLEVYRS----D--------GKLVAYTDLADTYGLLKLG 206 (320)
Q Consensus 166 ~~~~i~~l~~~GldGIEv~~~----~--------~~~~~~~~lA~~~~L~~tg 206 (320)
+...++.+.++|++|||++.. . .....+.+.++++||-+++
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPM 87 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCE
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEE
Confidence 567788888999999999752 1 1245778889999997754
No 85
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=20.06 E-value=2.2e+02 Score=23.50 Aligned_cols=60 Identities=10% Similarity=0.011 Sum_probs=26.0
Q ss_pred HHHHHHHc-CCEEEecCCCCCCChHHHHHHHHHcCccEEEEecCcC--cHHHHHHHHHHcCCc
Q 020912 144 AVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDG--KLVAYTDLADTYGLL 203 (320)
Q Consensus 144 ~I~~I~~a-GGiaVlAHP~~~~~~~~~i~~l~~~GldGIEv~~~~~--~~~~~~~lA~~~~L~ 203 (320)
.|+.+++. .++++..|-....-+...++.+.+.|.|+|=+.-... ....+.+.++++|+.
T Consensus 43 ~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 43 VITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp HHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 34444443 2455555543221123334555555666654432221 223444555555544
Done!