Query 020916
Match_columns 320
No_of_seqs 474 out of 1721
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 06:09:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020916.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020916hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 6.4E-39 1.4E-43 257.5 22.5 265 20-310 7-293 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 2.9E-37 6.2E-42 245.6 23.5 263 23-315 4-270 (276)
3 PRK03592 haloalkane dehalogena 100.0 7.3E-37 1.6E-41 245.7 23.6 266 20-313 6-291 (295)
4 KOG4178 Soluble epoxide hydrol 100.0 4.6E-36 9.9E-41 228.7 23.4 274 17-312 18-321 (322)
5 PLN02679 hydrolase, alpha/beta 100.0 2.2E-36 4.8E-41 247.8 23.3 269 24-312 64-358 (360)
6 PRK00870 haloalkane dehalogena 100.0 9.1E-36 2E-40 239.9 19.5 262 19-311 17-301 (302)
7 PRK03204 haloalkane dehalogena 100.0 3.1E-35 6.8E-40 234.1 21.3 260 20-308 13-285 (286)
8 PRK10349 carboxylesterase BioH 100.0 2.5E-35 5.3E-40 232.2 20.5 238 64-310 14-255 (256)
9 TIGR03056 bchO_mg_che_rel puta 100.0 1.2E-34 2.6E-39 231.7 24.4 261 22-309 7-278 (278)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 8.3E-35 1.8E-39 232.8 22.6 243 62-309 29-281 (282)
11 PLN02578 hydrolase 100.0 1.4E-34 3E-39 237.1 24.3 243 62-309 85-353 (354)
12 PLN02965 Probable pheophorbida 100.0 6.6E-35 1.4E-39 229.2 20.5 238 65-312 5-254 (255)
13 PRK06489 hypothetical protein; 100.0 5E-34 1.1E-38 234.5 23.6 267 30-312 48-358 (360)
14 PLN03084 alpha/beta hydrolase 100.0 7.9E-34 1.7E-38 231.3 24.3 257 29-310 112-383 (383)
15 PLN03087 BODYGUARD 1 domain co 100.0 1.5E-33 3.3E-38 233.7 25.3 268 23-310 178-478 (481)
16 PLN02385 hydrolase; alpha/beta 100.0 2E-34 4.3E-39 236.2 17.6 260 24-312 64-346 (349)
17 PRK10673 acyl-CoA esterase; Pr 100.0 1.9E-33 4.2E-38 221.7 22.3 237 61-310 14-254 (255)
18 TIGR03611 RutD pyrimidine util 100.0 2E-33 4.4E-38 222.0 20.5 241 61-310 11-257 (257)
19 PHA02857 monoglyceride lipase; 100.0 3.3E-32 7.1E-37 216.9 24.8 255 25-311 4-273 (276)
20 TIGR02427 protocat_pcaD 3-oxoa 100.0 9.9E-33 2.1E-37 217.1 21.1 236 62-309 12-251 (251)
21 PRK11126 2-succinyl-6-hydroxy- 100.0 1.1E-32 2.4E-37 215.5 19.7 235 63-311 2-242 (242)
22 PLN02298 hydrolase, alpha/beta 100.0 4.4E-32 9.6E-37 221.2 23.1 263 23-315 34-321 (330)
23 PRK10749 lysophospholipase L2; 100.0 1.8E-31 3.9E-36 216.7 26.5 265 20-311 30-329 (330)
24 TIGR01738 bioH putative pimelo 100.0 1.1E-32 2.5E-37 216.0 18.9 237 63-308 4-245 (245)
25 PRK08775 homoserine O-acetyltr 100.0 1.7E-32 3.8E-37 224.0 19.0 265 21-312 36-340 (343)
26 KOG1454 Predicted hydrolase/ac 100.0 1.1E-32 2.5E-37 219.7 17.4 281 18-312 22-325 (326)
27 PRK07581 hypothetical protein; 100.0 3.8E-32 8.3E-37 222.2 19.2 264 30-312 24-337 (339)
28 KOG4409 Predicted hydrolase/ac 100.0 1.4E-31 3.1E-36 204.8 20.7 249 61-311 88-364 (365)
29 PLN02211 methyl indole-3-aceta 100.0 6.2E-31 1.3E-35 207.4 22.4 239 61-311 16-270 (273)
30 PRK00175 metX homoserine O-ace 100.0 3.9E-31 8.4E-36 218.2 20.2 266 30-314 31-377 (379)
31 PRK14875 acetoin dehydrogenase 100.0 8.3E-31 1.8E-35 217.8 20.8 253 23-310 111-370 (371)
32 PF12697 Abhydrolase_6: Alpha/ 100.0 5E-32 1.1E-36 209.9 12.2 221 66-303 1-228 (228)
33 TIGR01392 homoserO_Ac_trn homo 100.0 3.2E-31 7E-36 217.3 17.5 262 30-309 14-351 (351)
34 PLN02894 hydrolase, alpha/beta 100.0 3.3E-30 7.1E-35 213.4 23.5 261 51-314 93-388 (402)
35 TIGR01250 pro_imino_pep_2 prol 100.0 3.6E-30 7.7E-35 206.8 22.1 259 25-309 6-288 (288)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 7.4E-30 1.6E-34 200.7 20.0 242 63-309 1-251 (251)
37 PLN02980 2-oxoglutarate decarb 100.0 8.7E-30 1.9E-34 240.7 23.0 247 62-314 1370-1642(1655)
38 PLN02652 hydrolase; alpha/beta 100.0 6.6E-29 1.4E-33 203.8 23.7 239 62-313 135-389 (395)
39 TIGR01249 pro_imino_pep_1 prol 100.0 2.4E-29 5.1E-34 202.6 20.6 124 22-166 5-131 (306)
40 COG2267 PldB Lysophospholipase 100.0 8.3E-29 1.8E-33 195.8 21.0 265 24-313 12-296 (298)
41 PLN02511 hydrolase 100.0 1.8E-29 3.9E-34 208.2 16.9 273 21-318 71-372 (388)
42 KOG1455 Lysophospholipase [Lip 100.0 9.5E-30 2.1E-34 191.2 12.4 259 23-310 29-311 (313)
43 KOG2984 Predicted hydrolase [G 100.0 1.8E-29 3.8E-34 177.2 11.7 251 20-311 20-276 (277)
44 COG1647 Esterase/lipase [Gener 100.0 6.2E-28 1.3E-32 172.5 18.4 224 62-310 14-243 (243)
45 PRK05855 short chain dehydroge 100.0 2.6E-28 5.6E-33 214.8 20.0 260 25-312 7-293 (582)
46 PRK06765 homoserine O-acetyltr 100.0 5.7E-27 1.2E-31 191.6 18.3 265 30-310 39-387 (389)
47 KOG2382 Predicted alpha/beta h 100.0 3.7E-26 8E-31 174.9 20.6 240 61-311 50-313 (315)
48 PRK13604 luxD acyl transferase 100.0 3.2E-26 6.9E-31 177.4 19.6 244 23-312 11-260 (307)
49 PRK05077 frsA fermentation/res 99.9 2.1E-25 4.5E-30 184.8 24.9 240 22-311 169-412 (414)
50 PRK10985 putative hydrolase; P 99.9 7.5E-26 1.6E-30 183.3 18.7 267 21-312 31-321 (324)
51 TIGR01607 PST-A Plasmodium sub 99.9 2.3E-25 4.9E-30 180.4 20.4 253 28-309 4-331 (332)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 8.9E-25 1.9E-29 172.7 18.0 228 62-310 25-274 (274)
53 PRK11071 esterase YqiA; Provis 99.9 1.6E-23 3.6E-28 155.5 17.9 181 64-309 2-189 (190)
54 PRK10566 esterase; Provisional 99.9 9.2E-23 2E-27 160.1 23.0 204 61-311 25-248 (249)
55 PLN02872 triacylglycerol lipas 99.9 5.5E-23 1.2E-27 168.2 21.6 284 14-313 35-391 (395)
56 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-24 2.4E-29 169.1 8.7 209 91-305 1-229 (230)
57 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-22 2.6E-27 166.6 18.7 241 62-310 61-349 (350)
58 KOG2564 Predicted acetyltransf 99.9 4.3E-23 9.4E-28 152.7 11.6 237 61-312 72-328 (343)
59 TIGR01838 PHA_synth_I poly(R)- 99.9 9.5E-22 2.1E-26 165.3 20.1 231 62-298 187-462 (532)
60 COG3208 GrsT Predicted thioest 99.9 2.8E-21 6E-26 142.0 18.9 227 61-310 5-235 (244)
61 KOG1552 Predicted alpha/beta h 99.9 2.4E-21 5.2E-26 143.3 16.9 193 62-314 59-255 (258)
62 PRK07868 acyl-CoA synthetase; 99.9 6.5E-21 1.4E-25 175.3 23.1 247 62-314 66-364 (994)
63 COG0596 MhpC Predicted hydrola 99.9 1.5E-20 3.3E-25 149.2 22.0 242 63-309 21-280 (282)
64 KOG4391 Predicted alpha/beta h 99.9 9.4E-22 2E-26 140.2 11.9 222 22-313 55-284 (300)
65 PF12695 Abhydrolase_5: Alpha/ 99.9 3.9E-21 8.5E-26 138.0 14.8 142 65-291 1-145 (145)
66 PF03096 Ndr: Ndr family; Int 99.9 2.1E-19 4.5E-24 136.7 21.7 264 24-311 2-279 (283)
67 COG2021 MET2 Homoserine acetyl 99.9 1E-19 2.2E-24 141.8 19.8 263 30-310 34-367 (368)
68 COG0429 Predicted hydrolase of 99.9 6.3E-20 1.4E-24 140.5 16.3 268 21-312 49-341 (345)
69 PRK11460 putative hydrolase; P 99.8 1.9E-19 4.2E-24 138.3 18.2 173 61-308 14-209 (232)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 6.5E-20 1.4E-24 141.9 14.7 105 62-166 24-135 (266)
71 KOG2931 Differentiation-relate 99.8 4.6E-18 9.9E-23 127.4 21.8 267 21-311 22-306 (326)
72 COG1506 DAP2 Dipeptidyl aminop 99.8 9.6E-19 2.1E-23 152.8 20.2 238 20-312 364-617 (620)
73 KOG1838 Alpha/beta hydrolase [ 99.8 8.1E-19 1.8E-23 139.5 17.7 275 20-312 92-389 (409)
74 PF06342 DUF1057: Alpha/beta h 99.8 1E-17 2.2E-22 125.8 20.7 104 62-168 34-140 (297)
75 PLN02442 S-formylglutathione h 99.8 7.7E-18 1.7E-22 133.5 19.9 187 61-293 45-264 (283)
76 KOG4667 Predicted esterase [Li 99.8 2.9E-18 6.4E-23 122.4 15.1 217 61-309 31-256 (269)
77 TIGR02821 fghA_ester_D S-formy 99.8 1.7E-17 3.6E-22 131.4 20.8 185 62-293 41-258 (275)
78 PF06500 DUF1100: Alpha/beta h 99.8 1.4E-17 3.1E-22 133.6 18.3 241 17-311 159-409 (411)
79 PLN00021 chlorophyllase 99.8 2.4E-17 5.2E-22 131.3 17.9 104 61-165 50-166 (313)
80 PF00326 Peptidase_S9: Prolyl 99.8 4.9E-18 1.1E-22 129.8 12.2 193 79-312 2-210 (213)
81 PF00975 Thioesterase: Thioest 99.8 7.8E-17 1.7E-21 124.8 18.5 220 64-308 1-229 (229)
82 PRK10162 acetyl esterase; Prov 99.7 5E-16 1.1E-20 125.4 20.4 213 62-311 80-315 (318)
83 PF02230 Abhydrolase_2: Phosph 99.7 1.1E-16 2.5E-21 122.2 15.3 178 60-311 11-215 (216)
84 PF05448 AXE1: Acetyl xylan es 99.7 4.5E-16 9.8E-21 124.1 18.2 229 30-310 65-319 (320)
85 TIGR01840 esterase_phb esteras 99.7 3.6E-16 7.7E-21 119.1 16.3 104 61-165 11-130 (212)
86 TIGR03230 lipo_lipase lipoprot 99.7 9.6E-17 2.1E-21 131.6 13.1 106 61-166 39-155 (442)
87 TIGR01849 PHB_depoly_PhaZ poly 99.7 5.2E-16 1.1E-20 125.9 17.0 246 63-310 102-405 (406)
88 PF06821 Ser_hydrolase: Serine 99.7 5.2E-16 1.1E-20 112.4 14.3 156 66-296 1-158 (171)
89 COG0400 Predicted esterase [Ge 99.7 5E-16 1.1E-20 114.9 14.4 174 59-310 14-204 (207)
90 PF01738 DLH: Dienelactone hyd 99.7 7.9E-16 1.7E-20 117.9 13.9 177 61-310 12-216 (218)
91 TIGR00976 /NonD putative hydro 99.7 2.4E-15 5.2E-20 130.4 17.9 123 27-166 2-133 (550)
92 COG2945 Predicted hydrolase of 99.7 4.8E-15 1E-19 104.5 15.8 169 61-309 26-205 (210)
93 TIGR01839 PHA_synth_II poly(R) 99.7 6.8E-15 1.5E-19 123.0 19.6 223 61-291 213-481 (560)
94 cd00707 Pancreat_lipase_like P 99.7 1.7E-16 3.8E-21 124.8 9.5 105 62-167 35-149 (275)
95 COG0412 Dienelactone hydrolase 99.7 9.5E-14 2.1E-18 106.4 21.4 177 62-312 26-234 (236)
96 PF02273 Acyl_transf_2: Acyl t 99.7 1.2E-14 2.5E-19 106.5 15.2 229 24-293 5-239 (294)
97 KOG2565 Predicted hydrolases o 99.6 3.4E-14 7.3E-19 110.2 16.4 129 21-164 124-263 (469)
98 PF08538 DUF1749: Protein of u 99.6 1.5E-15 3.4E-20 116.9 7.6 231 62-309 32-303 (303)
99 COG3458 Acetyl esterase (deace 99.6 3.3E-14 7.2E-19 105.7 14.1 226 30-311 65-317 (321)
100 PRK10115 protease 2; Provision 99.6 1.2E-13 2.7E-18 121.8 20.4 221 22-293 417-655 (686)
101 PF05728 UPF0227: Uncharacteri 99.6 3E-13 6.5E-18 99.0 19.0 179 66-308 2-186 (187)
102 COG4757 Predicted alpha/beta h 99.6 1.8E-13 3.8E-18 99.5 15.0 255 25-308 9-280 (281)
103 COG3571 Predicted hydrolase of 99.6 1.9E-12 4.1E-17 88.5 18.0 181 63-312 14-212 (213)
104 PF12146 Hydrolase_4: Putative 99.5 3.5E-14 7.6E-19 88.4 7.3 72 53-125 5-79 (79)
105 COG3545 Predicted esterase of 99.5 3.7E-12 7.9E-17 89.1 16.7 173 64-311 3-179 (181)
106 PF10230 DUF2305: Uncharacteri 99.5 2.1E-12 4.6E-17 101.1 17.2 104 63-167 2-124 (266)
107 PRK10252 entF enterobactin syn 99.5 1.2E-12 2.5E-17 125.9 19.1 101 62-165 1067-1171(1296)
108 KOG2624 Triglyceride lipase-ch 99.5 3.5E-12 7.6E-17 103.6 18.8 272 20-312 47-399 (403)
109 PF07859 Abhydrolase_3: alpha/ 99.5 7.9E-13 1.7E-17 101.0 14.2 190 66-293 1-210 (211)
110 TIGR03502 lipase_Pla1_cef extr 99.5 3.6E-13 7.9E-18 117.6 11.6 89 62-151 448-576 (792)
111 KOG1515 Arylacetamide deacetyl 99.5 3.3E-11 7.1E-16 96.0 20.1 219 61-311 88-335 (336)
112 PF09752 DUF2048: Uncharacteri 99.4 8.1E-12 1.8E-16 98.1 15.3 231 61-309 90-347 (348)
113 COG3319 Thioesterase domains o 99.4 2.4E-11 5.2E-16 93.0 17.2 100 64-166 1-104 (257)
114 COG3243 PhaC Poly(3-hydroxyalk 99.4 3.3E-12 7.2E-17 101.6 12.2 224 62-294 106-373 (445)
115 PF12740 Chlorophyllase2: Chlo 99.4 9.1E-12 2E-16 94.6 14.1 104 61-165 15-131 (259)
116 KOG3975 Uncharacterized conser 99.4 2E-10 4.4E-15 84.7 20.2 245 61-308 27-300 (301)
117 PTZ00472 serine carboxypeptida 99.4 1.4E-10 3.1E-15 97.8 20.8 127 24-166 50-217 (462)
118 PRK05371 x-prolyl-dipeptidyl a 99.4 3E-11 6.6E-16 107.6 17.6 219 83-311 271-519 (767)
119 PF03959 FSH1: Serine hydrolas 99.4 9.8E-12 2.1E-16 94.3 11.9 161 62-295 3-205 (212)
120 PF02129 Peptidase_S15: X-Pro 99.4 1.5E-11 3.2E-16 97.5 13.1 123 30-167 1-138 (272)
121 COG0657 Aes Esterase/lipase [L 99.4 7E-11 1.5E-15 95.8 17.0 104 61-168 77-194 (312)
122 KOG4627 Kynurenine formamidase 99.3 2.3E-11 4.9E-16 87.0 11.3 181 60-297 64-253 (270)
123 PF06028 DUF915: Alpha/beta hy 99.3 3.8E-11 8.3E-16 92.2 13.2 202 62-308 10-252 (255)
124 KOG3043 Predicted hydrolase re 99.3 5.7E-11 1.2E-15 86.3 13.2 175 62-311 38-240 (242)
125 KOG2551 Phospholipase/carboxyh 99.3 1.7E-10 3.8E-15 83.9 14.9 176 62-313 4-222 (230)
126 PF07224 Chlorophyllase: Chlor 99.3 1E-10 2.2E-15 87.1 12.9 103 60-166 43-158 (307)
127 PF10503 Esterase_phd: Esteras 99.3 2.7E-10 5.8E-15 85.6 15.3 103 62-165 15-132 (220)
128 PF07819 PGAP1: PGAP1-like pro 99.3 5.5E-11 1.2E-15 90.5 10.8 102 62-167 3-125 (225)
129 KOG2100 Dipeptidyl aminopeptid 99.3 6.3E-10 1.4E-14 99.1 18.9 231 19-312 496-748 (755)
130 PRK04940 hypothetical protein; 99.3 1.7E-09 3.7E-14 77.6 16.9 169 66-309 2-178 (180)
131 KOG2112 Lysophospholipase [Lip 99.2 3.6E-10 7.7E-15 81.7 12.7 176 62-310 2-203 (206)
132 PF03403 PAF-AH_p_II: Platelet 99.2 3.2E-10 7E-15 93.1 11.8 103 61-165 98-262 (379)
133 smart00824 PKS_TE Thioesterase 99.2 1.5E-09 3.3E-14 82.9 14.0 95 68-165 2-102 (212)
134 PF06057 VirJ: Bacterial virul 99.1 7.6E-10 1.7E-14 79.5 10.6 96 64-165 3-107 (192)
135 PF08840 BAAT_C: BAAT / Acyl-C 99.1 4E-10 8.8E-15 85.4 9.4 138 130-293 22-164 (213)
136 PF11339 DUF3141: Protein of u 99.1 1.5E-08 3.3E-13 83.2 18.7 82 83-169 93-179 (581)
137 PF05677 DUF818: Chlamydia CHL 99.1 1.3E-08 2.9E-13 79.4 16.7 87 61-151 135-236 (365)
138 PF12715 Abhydrolase_7: Abhydr 99.1 9.8E-10 2.1E-14 87.5 10.2 104 61-165 113-260 (390)
139 KOG2281 Dipeptidyl aminopeptid 99.1 6.7E-09 1.5E-13 86.9 14.6 227 27-310 619-866 (867)
140 PF00450 Peptidase_S10: Serine 99.1 6E-08 1.3E-12 82.2 20.5 128 24-167 14-183 (415)
141 COG4188 Predicted dienelactone 99.0 8.2E-10 1.8E-14 87.3 5.9 206 62-300 70-303 (365)
142 PF00151 Lipase: Lipase; Inte 99.0 5.4E-10 1.2E-14 89.8 4.3 107 61-167 69-189 (331)
143 PF01674 Lipase_2: Lipase (cla 99.0 9.4E-10 2E-14 82.5 4.9 98 64-163 2-107 (219)
144 COG3509 LpqC Poly(3-hydroxybut 99.0 1.3E-08 2.9E-13 77.7 11.0 129 20-165 34-179 (312)
145 PLN02733 phosphatidylcholine-s 99.0 7.8E-09 1.7E-13 86.1 10.7 91 75-168 106-204 (440)
146 COG4099 Predicted peptidase [G 98.9 1.2E-08 2.6E-13 77.6 10.4 102 63-165 191-304 (387)
147 KOG3253 Predicted alpha/beta h 98.9 4.2E-08 9.1E-13 81.7 13.5 177 62-311 175-374 (784)
148 COG4814 Uncharacterized protei 98.9 2.5E-07 5.5E-12 69.0 15.2 102 64-166 46-177 (288)
149 KOG3847 Phospholipase A2 (plat 98.9 3.7E-08 8.1E-13 75.5 10.6 103 61-165 116-275 (399)
150 PF03583 LIP: Secretory lipase 98.8 2.5E-07 5.5E-12 73.6 15.4 46 248-293 218-266 (290)
151 COG3150 Predicted esterase [Ge 98.8 1.3E-07 2.7E-12 65.8 10.7 89 66-166 2-92 (191)
152 PRK10439 enterobactin/ferric e 98.8 7.7E-07 1.7E-11 74.3 17.4 105 61-165 207-323 (411)
153 PF04301 DUF452: Protein of un 98.8 9.8E-08 2.1E-12 70.9 10.0 81 62-166 10-91 (213)
154 PF05990 DUF900: Alpha/beta hy 98.8 6.2E-08 1.3E-12 74.4 8.8 105 61-165 16-137 (233)
155 PF05705 DUF829: Eukaryotic pr 98.7 9.6E-07 2.1E-11 68.8 15.4 63 246-308 175-240 (240)
156 PF12048 DUF3530: Protein of u 98.7 7E-06 1.5E-10 65.9 20.4 128 21-165 62-229 (310)
157 KOG1553 Predicted alpha/beta h 98.7 9.9E-08 2.2E-12 74.3 8.0 99 63-164 243-344 (517)
158 PF05057 DUF676: Putative seri 98.7 6.9E-08 1.5E-12 73.5 6.5 86 62-149 3-97 (217)
159 COG1075 LipA Predicted acetylt 98.6 1.8E-07 3.8E-12 76.1 8.3 103 63-168 59-167 (336)
160 KOG1551 Uncharacterized conser 98.6 4.7E-07 1E-11 67.9 9.6 231 62-313 112-368 (371)
161 COG2936 Predicted acyl esteras 98.6 1.7E-06 3.8E-11 73.2 13.0 127 24-166 22-160 (563)
162 PF10340 DUF2424: Protein of u 98.5 1.6E-05 3.4E-10 64.4 17.1 105 62-168 121-238 (374)
163 PLN03016 sinapoylglucose-malat 98.5 3.7E-05 8.1E-10 64.7 20.0 61 249-310 347-430 (433)
164 PLN02209 serine carboxypeptida 98.5 3.1E-05 6.6E-10 65.2 19.2 105 61-166 66-213 (437)
165 KOG4840 Predicted hydrolases o 98.5 7.8E-06 1.7E-10 59.9 13.2 102 62-166 35-145 (299)
166 PLN02606 palmitoyl-protein thi 98.5 5.4E-06 1.2E-10 64.7 12.9 101 62-167 25-134 (306)
167 PF10142 PhoPQ_related: PhoPQ- 98.4 4.6E-06 1E-10 67.6 11.6 150 128-314 170-323 (367)
168 PF05577 Peptidase_S28: Serine 98.4 3.3E-06 7.2E-11 71.8 11.1 104 62-166 28-149 (434)
169 COG4782 Uncharacterized protei 98.4 3.1E-06 6.6E-11 67.0 9.5 105 61-165 114-234 (377)
170 KOG1282 Serine carboxypeptidas 98.4 0.00015 3.3E-09 60.7 19.8 128 23-167 46-215 (454)
171 COG1505 Serine proteases of th 98.4 3.2E-06 6.9E-11 71.1 9.3 129 22-165 395-535 (648)
172 COG1073 Hydrolases of the alph 98.4 7.9E-06 1.7E-10 65.9 11.7 68 244-311 226-297 (299)
173 PLN02633 palmitoyl protein thi 98.4 1.7E-05 3.7E-10 62.0 12.6 102 62-166 24-132 (314)
174 PF08386 Abhydrolase_4: TAP-li 98.3 3.8E-06 8.2E-11 55.6 7.5 64 249-314 34-97 (103)
175 KOG3724 Negative regulator of 98.2 1.4E-05 3E-10 69.4 10.4 103 60-166 86-221 (973)
176 cd00312 Esterase_lipase Estera 98.2 1.3E-05 2.8E-10 69.6 10.4 105 61-166 93-214 (493)
177 PF00756 Esterase: Putative es 98.2 3.7E-06 8.1E-11 66.1 6.3 51 116-166 98-151 (251)
178 COG4553 DepA Poly-beta-hydroxy 98.2 0.00025 5.4E-09 54.6 15.4 105 62-167 102-211 (415)
179 KOG3101 Esterase D [General fu 98.2 1.9E-05 4E-10 57.5 8.9 104 62-166 43-177 (283)
180 PF11144 DUF2920: Protein of u 98.2 0.00014 2.9E-09 59.3 14.7 62 252-313 296-370 (403)
181 COG1770 PtrB Protease II [Amin 98.1 0.00035 7.7E-09 60.0 15.5 108 60-167 445-564 (682)
182 KOG2237 Predicted serine prote 98.0 3.6E-05 7.8E-10 65.4 9.1 132 22-166 442-585 (712)
183 COG2272 PnbA Carboxylesterase 98.0 6E-05 1.3E-09 62.5 9.9 119 29-166 77-218 (491)
184 KOG2541 Palmitoyl protein thio 98.0 9.4E-05 2E-09 56.2 9.1 99 64-166 24-129 (296)
185 PF02450 LCAT: Lecithin:choles 97.9 0.00013 2.7E-09 61.0 10.4 81 79-167 66-162 (389)
186 PF00135 COesterase: Carboxyle 97.8 9.9E-05 2.2E-09 65.0 8.8 121 29-165 106-245 (535)
187 PF02089 Palm_thioest: Palmito 97.8 3.6E-05 7.8E-10 59.7 5.0 104 62-166 4-117 (279)
188 PLN02213 sinapoylglucose-malat 97.7 0.0032 6.8E-08 51.3 15.6 60 250-310 234-316 (319)
189 KOG2183 Prolylcarboxypeptidase 97.7 0.00022 4.7E-09 57.7 8.3 101 64-165 81-202 (492)
190 KOG2182 Hydrolytic enzymes of 97.5 0.00076 1.7E-08 56.1 8.7 109 57-166 80-208 (514)
191 KOG3967 Uncharacterized conser 97.5 0.0015 3.3E-08 47.9 9.3 105 61-165 99-227 (297)
192 cd00741 Lipase Lipase. Lipase 97.5 0.00035 7.5E-09 50.3 6.0 38 128-165 26-67 (153)
193 PF07082 DUF1350: Protein of u 97.5 0.0099 2.1E-07 45.4 13.4 95 62-165 16-125 (250)
194 PF04083 Abhydro_lipase: Parti 97.4 0.00023 5E-09 41.8 3.8 48 20-80 11-59 (63)
195 COG0627 Predicted esterase [Ge 97.4 0.0011 2.3E-08 53.3 8.4 108 61-168 52-190 (316)
196 KOG1202 Animal-type fatty acid 97.4 0.0058 1.3E-07 56.5 13.6 97 61-167 2121-2221(2376)
197 COG2830 Uncharacterized protei 97.4 0.00023 5E-09 49.5 3.9 79 63-165 11-90 (214)
198 PF06259 Abhydrolase_8: Alpha/ 97.4 0.0064 1.4E-07 44.4 11.3 53 114-166 88-145 (177)
199 COG2382 Fes Enterochelin ester 97.3 0.0062 1.3E-07 47.7 11.2 103 61-165 96-212 (299)
200 PF01764 Lipase_3: Lipase (cla 97.3 0.00081 1.8E-08 47.5 5.9 36 116-151 50-85 (140)
201 PF06441 EHN: Epoxide hydrolas 97.1 0.0018 4E-08 43.2 5.3 48 17-83 64-111 (112)
202 PF11187 DUF2974: Protein of u 97.0 0.0019 4.2E-08 49.2 6.0 47 118-165 73-123 (224)
203 COG2819 Predicted hydrolase of 96.9 0.0019 4.1E-08 49.7 5.1 38 128-165 135-172 (264)
204 COG2939 Carboxypeptidase C (ca 96.9 0.008 1.7E-07 50.5 8.5 105 62-167 100-238 (498)
205 KOG2521 Uncharacterized conser 96.8 0.077 1.7E-06 43.2 13.7 238 62-313 37-292 (350)
206 cd00519 Lipase_3 Lipase (class 96.7 0.0032 6.9E-08 48.7 5.2 24 128-151 126-149 (229)
207 PLN02517 phosphatidylcholine-s 96.7 0.0049 1.1E-07 53.1 6.6 83 79-166 157-264 (642)
208 KOG2369 Lecithin:cholesterol a 96.7 0.003 6.5E-08 52.4 4.8 83 79-166 125-226 (473)
209 TIGR03712 acc_sec_asp2 accesso 96.6 0.34 7.5E-06 41.0 16.7 109 50-163 276-388 (511)
210 COG3946 VirJ Type IV secretory 96.6 0.018 3.9E-07 47.0 8.4 86 62-153 259-349 (456)
211 PF11288 DUF3089: Protein of u 96.5 0.0073 1.6E-07 45.1 5.4 68 84-151 39-116 (207)
212 COG4287 PqaA PhoPQ-activated p 96.5 0.027 5.9E-07 45.3 8.7 64 246-313 326-389 (507)
213 KOG4372 Predicted alpha/beta h 96.5 0.0043 9.4E-08 50.5 4.5 87 61-148 78-168 (405)
214 KOG1516 Carboxylesterase and r 96.4 0.033 7.2E-07 49.3 10.3 103 63-165 112-232 (545)
215 PLN02162 triacylglycerol lipas 96.4 0.0098 2.1E-07 49.8 6.3 33 117-149 265-297 (475)
216 PLN00413 triacylglycerol lipas 96.4 0.011 2.4E-07 49.6 6.6 34 116-149 270-303 (479)
217 PF01083 Cutinase: Cutinase; 96.3 0.013 2.8E-07 43.2 5.7 74 91-166 40-123 (179)
218 PLN02571 triacylglycerol lipas 96.2 0.0094 2E-07 49.4 5.1 36 115-150 209-246 (413)
219 PLN02454 triacylglycerol lipas 96.2 0.011 2.4E-07 49.0 5.4 32 119-150 215-248 (414)
220 KOG1283 Serine carboxypeptidas 96.0 0.059 1.3E-06 42.6 8.1 129 24-166 6-167 (414)
221 PLN02408 phospholipase A1 95.9 0.017 3.6E-07 47.2 5.1 35 117-151 185-221 (365)
222 PF05277 DUF726: Protein of un 95.8 0.028 6.1E-07 45.7 5.9 39 128-166 218-261 (345)
223 PLN02310 triacylglycerol lipas 95.7 0.034 7.3E-07 46.1 6.1 35 116-150 191-229 (405)
224 COG4947 Uncharacterized protei 95.6 0.032 7E-07 39.7 5.0 102 62-166 25-137 (227)
225 PF05576 Peptidase_S37: PS-10 95.6 0.023 5E-07 46.6 4.7 104 60-165 60-169 (448)
226 PLN02934 triacylglycerol lipas 95.5 0.027 5.9E-07 47.8 5.0 34 116-149 307-340 (515)
227 PLN02324 triacylglycerol lipas 95.4 0.032 6.9E-07 46.3 5.1 34 117-150 200-235 (415)
228 PF06850 PHB_depo_C: PHB de-po 95.4 0.028 6E-07 41.1 4.2 61 250-310 135-201 (202)
229 PLN02802 triacylglycerol lipas 95.1 0.042 9.2E-07 46.7 5.1 35 116-150 314-350 (509)
230 PLN02753 triacylglycerol lipas 95.1 0.04 8.8E-07 47.0 4.8 35 116-150 293-332 (531)
231 PLN03037 lipase class 3 family 95.0 0.04 8.7E-07 46.9 4.7 35 116-150 300-338 (525)
232 PLN02761 lipase class 3 family 94.8 0.05 1.1E-06 46.4 4.8 34 116-149 274-313 (527)
233 PLN02719 triacylglycerol lipas 94.8 0.059 1.3E-06 45.9 5.0 35 116-150 279-318 (518)
234 KOG4569 Predicted lipase [Lipi 94.0 0.11 2.3E-06 42.7 5.0 37 114-150 155-191 (336)
235 PLN02847 triacylglycerol lipas 94.0 0.12 2.6E-06 44.9 5.2 21 130-150 251-271 (633)
236 PF07519 Tannase: Tannase and 93.6 0.5 1.1E-05 40.9 8.4 65 250-314 354-430 (474)
237 PF03283 PAE: Pectinacetyleste 91.5 5.2 0.00011 33.4 11.4 37 129-165 155-195 (361)
238 KOG4388 Hormone-sensitive lipa 91.4 0.32 7E-06 42.0 4.3 102 60-165 393-508 (880)
239 PF09949 DUF2183: Uncharacteri 91.1 2.7 5.8E-05 27.6 7.5 82 79-160 12-97 (100)
240 KOG4540 Putative lipase essent 91.1 0.54 1.2E-05 36.8 4.9 28 125-152 271-298 (425)
241 COG5153 CVT17 Putative lipase 91.1 0.54 1.2E-05 36.8 4.9 28 125-152 271-298 (425)
242 PF08237 PE-PPE: PE-PPE domain 90.5 1.6 3.4E-05 33.6 7.0 41 111-151 27-69 (225)
243 KOG2029 Uncharacterized conser 89.6 0.74 1.6E-05 40.1 4.9 53 113-165 506-572 (697)
244 KOG2385 Uncharacterized conser 88.9 0.79 1.7E-05 39.1 4.6 42 126-167 443-489 (633)
245 PF07519 Tannase: Tannase and 85.9 1.5 3.3E-05 38.0 4.8 83 83-166 52-151 (474)
246 PRK12467 peptide synthase; Pro 83.7 5.6 0.00012 44.6 8.8 98 62-162 3691-3792(3956)
247 PF06309 Torsin: Torsin; Inte 79.4 2.4 5.1E-05 29.1 2.8 19 61-80 50-68 (127)
248 KOG4389 Acetylcholinesterase/B 78.4 7.5 0.00016 33.5 5.9 116 30-164 119-254 (601)
249 smart00827 PKS_AT Acyl transfe 77.1 3.4 7.5E-05 33.4 3.8 30 120-149 72-101 (298)
250 PF00698 Acyl_transf_1: Acyl t 77.0 2.1 4.5E-05 35.1 2.4 31 120-150 74-104 (318)
251 PF09994 DUF2235: Uncharacteri 76.8 30 0.00066 27.7 8.9 88 64-151 2-113 (277)
252 TIGR03131 malonate_mdcH malona 76.2 3.8 8.3E-05 33.1 3.8 30 120-149 66-95 (295)
253 TIGR00128 fabD malonyl CoA-acy 72.0 5.2 0.00011 32.2 3.6 30 121-150 73-103 (290)
254 PRK10279 hypothetical protein; 71.1 6.6 0.00014 31.8 3.9 33 120-152 23-55 (300)
255 cd07198 Patatin Patatin-like p 71.0 7.6 0.00016 28.4 4.0 33 120-152 16-48 (172)
256 COG4822 CbiK Cobalamin biosynt 70.0 26 0.00057 26.6 6.3 60 62-134 137-198 (265)
257 cd07225 Pat_PNPLA6_PNPLA7 Pata 69.8 7.6 0.00016 31.6 4.0 62 79-151 3-64 (306)
258 PF06792 UPF0261: Uncharacteri 68.5 49 0.0011 28.1 8.3 95 64-160 2-125 (403)
259 cd07207 Pat_ExoU_VipD_like Exo 68.0 9.1 0.0002 28.6 4.0 32 120-151 17-48 (194)
260 cd01714 ETF_beta The electron 67.5 21 0.00045 27.0 5.7 63 91-161 78-145 (202)
261 cd07227 Pat_Fungal_NTE1 Fungal 66.4 10 0.00022 30.3 4.0 33 119-151 27-59 (269)
262 cd07210 Pat_hypo_W_succinogene 65.6 12 0.00026 28.8 4.2 31 121-151 19-49 (221)
263 COG1752 RssA Predicted esteras 65.4 9.9 0.00021 31.0 3.9 33 119-151 28-60 (306)
264 COG1448 TyrB Aspartate/tyrosin 64.2 88 0.0019 26.4 11.8 89 62-164 170-264 (396)
265 COG2939 Carboxypeptidase C (ca 63.4 10 0.00022 32.8 3.6 59 251-310 427-490 (498)
266 TIGR02816 pfaB_fam PfaB family 63.3 9.5 0.00021 33.8 3.6 32 120-151 254-286 (538)
267 PF05576 Peptidase_S37: PS-10 62.8 6.2 0.00013 33.2 2.2 55 251-309 353-412 (448)
268 cd07228 Pat_NTE_like_bacteria 62.8 14 0.0003 27.2 4.0 31 122-152 20-50 (175)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 61.7 14 0.0003 28.3 3.9 33 120-152 16-48 (215)
270 PF10081 Abhydrolase_9: Alpha/ 59.8 16 0.00035 29.1 3.9 36 131-166 110-148 (289)
271 COG0279 GmhA Phosphoheptose is 59.7 26 0.00057 25.4 4.6 72 67-142 44-121 (176)
272 cd07230 Pat_TGL4-5_like Triacy 58.8 8.7 0.00019 32.9 2.6 36 120-155 91-126 (421)
273 cd07205 Pat_PNPLA6_PNPLA7_NTE1 58.4 21 0.00045 26.2 4.3 31 121-151 19-49 (175)
274 COG3933 Transcriptional antite 58.1 78 0.0017 27.3 7.7 76 62-148 108-183 (470)
275 PF12242 Eno-Rase_NADH_b: NAD( 56.7 21 0.00045 22.0 3.2 24 128-151 38-61 (78)
276 PF00448 SRP54: SRP54-type pro 56.2 62 0.0013 24.4 6.5 70 83-160 75-147 (196)
277 KOG2170 ATPase of the AAA+ sup 56.2 13 0.00028 29.9 2.9 20 60-80 106-125 (344)
278 PF10605 3HBOH: 3HB-oligomer h 55.2 10 0.00022 33.6 2.4 37 132-168 287-324 (690)
279 cd07232 Pat_PLPL Patain-like p 55.0 9.3 0.0002 32.6 2.1 39 120-158 85-123 (407)
280 cd07231 Pat_SDP1-like Sugar-De 54.1 12 0.00027 30.4 2.6 34 120-153 86-119 (323)
281 cd07229 Pat_TGL3_like Triacylg 54.0 10 0.00022 31.9 2.2 39 120-158 101-139 (391)
282 PRK02399 hypothetical protein; 53.6 1.4E+02 0.0031 25.5 9.7 96 64-160 4-127 (406)
283 COG1073 Hydrolases of the alph 52.2 1.8 4E-05 34.6 -2.4 89 61-152 47-154 (299)
284 cd07208 Pat_hypo_Ecoli_yjju_li 52.1 25 0.00054 27.9 4.1 33 121-153 17-50 (266)
285 cd07212 Pat_PNPLA9 Patatin-lik 48.5 36 0.00079 27.9 4.5 19 133-151 35-53 (312)
286 PLN03019 carbonic anhydrase 47.8 31 0.00068 28.2 3.9 32 116-147 201-232 (330)
287 COG0541 Ffh Signal recognition 46.4 1.2E+02 0.0025 26.3 7.0 48 114-161 198-247 (451)
288 COG4850 Uncharacterized conser 46.3 81 0.0017 25.9 5.8 48 117-164 265-314 (373)
289 cd07224 Pat_like Patatin-like 44.7 39 0.00086 26.3 4.0 33 120-152 17-51 (233)
290 cd07206 Pat_TGL3-4-5_SDP1 Tria 44.5 34 0.00073 27.8 3.6 30 126-155 93-122 (298)
291 TIGR03709 PPK2_rel_1 polyphosp 44.3 44 0.00096 26.6 4.2 66 62-139 54-123 (264)
292 PF11713 Peptidase_C80: Peptid 43.4 19 0.00041 26.0 2.0 44 99-142 62-116 (157)
293 PLN03014 carbonic anhydrase 42.6 44 0.00096 27.6 4.0 32 116-147 206-237 (347)
294 PRK14974 cell division protein 42.5 1.8E+02 0.004 24.2 7.6 62 91-160 223-286 (336)
295 PLN00416 carbonate dehydratase 41.9 55 0.0012 26.0 4.3 33 116-148 126-158 (258)
296 PF08484 Methyltransf_14: C-me 41.4 98 0.0021 22.5 5.3 46 117-162 54-101 (160)
297 PF07521 RMMBL: RNA-metabolisi 40.4 59 0.0013 17.3 4.4 32 91-135 7-38 (43)
298 TIGR02069 cyanophycinase cyano 40.2 1.8E+02 0.0039 23.0 7.0 53 253-310 2-54 (250)
299 PRK06490 glutamine amidotransf 40.2 1.7E+02 0.0038 22.9 6.9 86 62-148 7-103 (239)
300 COG0518 GuaA GMP synthase - Gl 39.9 1.6E+02 0.0036 22.2 6.6 35 114-148 62-96 (198)
301 TIGR01425 SRP54_euk signal rec 39.9 1.3E+02 0.0028 26.1 6.5 63 90-160 182-246 (429)
302 cd05312 NAD_bind_1_malic_enz N 39.6 47 0.001 26.7 3.7 84 65-150 26-126 (279)
303 cd01819 Patatin_and_cPLA2 Pata 39.5 57 0.0012 23.4 3.9 19 130-148 28-46 (155)
304 COG0529 CysC Adenylylsulfate k 38.5 1.7E+02 0.0036 21.9 6.3 37 61-97 20-58 (197)
305 cd07204 Pat_PNPLA_like Patatin 38.5 58 0.0012 25.6 4.1 20 133-152 34-53 (243)
306 TIGR03707 PPK2_P_aer polyphosp 38.3 61 0.0013 25.2 4.1 69 62-142 29-101 (230)
307 COG3340 PepE Peptidase E [Amin 37.9 1.5E+02 0.0033 22.8 5.8 36 62-98 31-70 (224)
308 PRK05282 (alpha)-aspartyl dipe 37.8 64 0.0014 25.2 4.1 37 62-99 30-70 (233)
309 COG0331 FabD (acyl-carrier-pro 36.9 52 0.0011 27.0 3.7 22 128-149 83-104 (310)
310 PRK06731 flhF flagellar biosyn 36.3 2.3E+02 0.0049 22.8 8.5 62 91-160 155-218 (270)
311 cd00883 beta_CA_cladeA Carboni 36.0 57 0.0012 24.3 3.5 31 117-147 68-98 (182)
312 PF14253 AbiH: Bacteriophage a 35.8 21 0.00045 28.4 1.4 19 129-147 234-252 (270)
313 cd07218 Pat_iPLA2 Calcium-inde 35.7 65 0.0014 25.3 4.0 21 132-152 32-52 (245)
314 COG1576 Uncharacterized conser 34.7 1.5E+02 0.0033 21.4 5.1 56 82-147 59-115 (155)
315 PF03490 Varsurf_PPLC: Variant 34.4 51 0.0011 18.2 2.2 26 111-136 6-31 (51)
316 cd07221 Pat_PNPLA3 Patatin-lik 34.2 72 0.0016 25.2 4.0 22 131-152 33-54 (252)
317 PF03976 PPK2: Polyphosphate k 34.1 32 0.0007 26.7 2.0 38 62-99 29-68 (228)
318 COG3887 Predicted signaling pr 34.1 1.1E+02 0.0024 27.5 5.3 48 117-165 323-378 (655)
319 cd00382 beta_CA Carbonic anhyd 33.8 69 0.0015 21.8 3.4 31 115-145 44-74 (119)
320 PF04084 ORC2: Origin recognit 32.9 2.9E+02 0.0063 23.0 8.3 33 111-143 117-150 (326)
321 PF01583 APS_kinase: Adenylyls 32.6 1E+02 0.0022 22.2 4.2 35 63-97 1-37 (156)
322 PLN03006 carbonate dehydratase 32.6 63 0.0014 26.2 3.4 32 116-147 158-189 (301)
323 cd07220 Pat_PNPLA2 Patatin-lik 32.5 76 0.0016 25.0 3.9 22 131-152 37-58 (249)
324 KOG0781 Signal recognition par 31.7 2.6E+02 0.0057 24.7 6.9 63 91-161 467-538 (587)
325 cd07222 Pat_PNPLA4 Patatin-lik 31.0 79 0.0017 24.9 3.8 18 132-149 33-50 (246)
326 PF00484 Pro_CA: Carbonic anhy 30.6 1.4E+02 0.0029 21.3 4.7 35 114-148 39-73 (153)
327 KOG1202 Animal-type fatty acid 30.4 80 0.0017 31.3 4.1 23 119-141 571-593 (2376)
328 KOG1465 Translation initiation 30.3 1.7E+02 0.0038 23.8 5.3 30 64-97 163-195 (353)
329 PRK10867 signal recognition pa 30.1 3.8E+02 0.0081 23.4 8.9 62 91-160 184-247 (433)
330 PF02590 SPOUT_MTase: Predicte 29.9 71 0.0015 23.0 3.0 50 83-141 60-110 (155)
331 TIGR00959 ffh signal recogniti 29.7 3.7E+02 0.0079 23.5 7.7 63 91-161 183-247 (428)
332 COG0288 CynT Carbonic anhydras 28.9 64 0.0014 24.6 2.8 36 114-149 76-111 (207)
333 PRK04148 hypothetical protein; 28.7 1.2E+02 0.0025 21.3 3.8 21 130-150 18-38 (134)
334 TIGR00064 ftsY signal recognit 28.4 3.1E+02 0.0068 22.0 7.8 66 88-161 152-225 (272)
335 cd00884 beta_CA_cladeB Carboni 28.0 92 0.002 23.4 3.5 33 116-148 73-105 (190)
336 KOG1752 Glutaredoxin and relat 27.9 1.9E+02 0.0041 19.2 5.3 75 62-152 13-91 (104)
337 KOG0780 Signal recognition par 27.5 3.5E+02 0.0075 23.3 6.8 67 86-160 178-247 (483)
338 cd08769 DAP_dppA_2 Peptidase M 27.4 3.3E+02 0.0072 21.9 6.7 57 246-310 144-202 (270)
339 PF12641 Flavodoxin_3: Flavodo 27.1 2.2E+02 0.0049 20.6 5.2 59 250-310 40-98 (160)
340 cd01014 nicotinamidase_related 27.1 1.7E+02 0.0036 20.9 4.7 48 119-166 89-136 (155)
341 COG3946 VirJ Type IV secretory 26.8 3.2E+02 0.007 23.5 6.5 81 82-162 66-154 (456)
342 PF15566 Imm18: Immunity prote 26.8 90 0.0019 17.6 2.4 31 113-143 4-34 (52)
343 TIGR02813 omega_3_PfaA polyket 26.5 71 0.0015 34.8 3.5 30 120-149 664-693 (2582)
344 PLN02752 [acyl-carrier protein 26.5 73 0.0016 26.5 3.1 17 133-149 127-143 (343)
345 PF03610 EIIA-man: PTS system 26.2 2.1E+02 0.0045 19.2 7.9 74 65-150 2-78 (116)
346 PF01734 Patatin: Patatin-like 26.2 71 0.0015 23.3 2.8 21 130-150 27-47 (204)
347 PLN02154 carbonic anhydrase 26.2 1.1E+02 0.0023 24.8 3.7 32 117-148 153-184 (290)
348 PRK00103 rRNA large subunit me 26.1 2.2E+02 0.0048 20.6 5.0 51 83-142 60-111 (157)
349 PF06289 FlbD: Flagellar prote 25.8 1.5E+02 0.0032 17.4 3.5 31 281-311 28-58 (60)
350 PF05577 Peptidase_S28: Serine 25.7 56 0.0012 28.2 2.4 39 251-294 378-416 (434)
351 PRK11613 folP dihydropteroate 25.7 3.7E+02 0.0079 21.9 7.1 15 130-144 211-225 (282)
352 COG1506 DAP2 Dipeptidyl aminop 25.3 1.2E+02 0.0025 27.9 4.3 45 61-105 549-598 (620)
353 PRK15219 carbonic anhydrase; P 24.9 58 0.0012 25.6 2.0 32 117-148 130-161 (245)
354 cd07211 Pat_PNPLA8 Patatin-lik 24.8 61 0.0013 26.5 2.3 17 133-149 44-60 (308)
355 PRK14194 bifunctional 5,10-met 24.3 1.5E+02 0.0033 24.2 4.3 34 117-150 143-182 (301)
356 COG3673 Uncharacterized conser 24.2 4.2E+02 0.0091 22.1 9.1 90 61-150 29-142 (423)
357 PLN02777 photosystem I P subun 24.1 44 0.00095 24.1 1.1 61 102-163 65-125 (167)
358 cd07213 Pat17_PNPLA8_PNPLA9_li 24.0 71 0.0015 25.8 2.5 19 133-151 37-55 (288)
359 PRK05368 homoserine O-succinyl 23.9 1.2E+02 0.0025 24.9 3.6 32 118-149 122-153 (302)
360 TIGR03607 patatin-related prot 23.8 1.1E+02 0.0024 28.6 3.8 22 128-149 64-85 (739)
361 cd07217 Pat17_PNPLA8_PNPLA9_li 23.6 73 0.0016 26.6 2.5 18 133-150 44-61 (344)
362 PRK05665 amidotransferase; Pro 23.6 1.6E+02 0.0036 23.0 4.3 35 114-148 74-108 (240)
363 PLN02748 tRNA dimethylallyltra 23.6 5.2E+02 0.011 22.9 7.9 75 61-138 19-120 (468)
364 COG1092 Predicted SAM-dependen 23.5 2.5E+02 0.0054 24.1 5.5 50 90-140 290-339 (393)
365 cd03145 GAT1_cyanophycinase Ty 23.3 3.5E+02 0.0076 20.8 7.1 38 252-289 2-39 (217)
366 PRK07053 glutamine amidotransf 23.2 3.7E+02 0.008 21.0 7.1 32 117-148 69-100 (234)
367 PRK10437 carbonic anhydrase; P 23.1 1.4E+02 0.003 23.1 3.7 31 117-147 78-108 (220)
368 PF10686 DUF2493: Protein of u 23.0 1.2E+02 0.0026 18.4 2.8 26 62-90 30-55 (71)
369 KOG1532 GTPase XAB1, interacts 22.5 3.1E+02 0.0066 22.3 5.4 30 61-90 16-46 (366)
370 cd03131 GATase1_HTS Type 1 glu 22.5 55 0.0012 24.2 1.4 35 116-150 83-117 (175)
371 PF13709 DUF4159: Domain of un 22.2 3.6E+02 0.0079 20.6 5.9 39 248-288 52-90 (207)
372 cd07199 Pat17_PNPLA8_PNPLA9_li 22.2 1.6E+02 0.0035 23.2 4.1 18 133-150 37-54 (258)
373 COG2230 Cfa Cyclopropane fatty 22.1 2.6E+02 0.0055 22.7 5.1 49 115-164 56-107 (283)
374 PRK03363 fixB putative electro 21.9 4.1E+02 0.0089 22.0 6.3 53 91-151 50-103 (313)
375 COG0159 TrpA Tryptophan syntha 21.8 4.3E+02 0.0092 21.2 6.5 71 63-148 95-167 (265)
376 cd01715 ETF_alpha The electron 21.8 2.7E+02 0.0059 20.2 5.0 53 91-151 53-106 (168)
377 cd03379 beta_CA_cladeD Carboni 21.5 1.5E+02 0.0033 20.9 3.4 31 115-145 41-71 (142)
378 cd03818 GT1_ExpC_like This fam 21.5 5E+02 0.011 22.0 7.9 36 66-104 2-38 (396)
379 KOG2316 Predicted ATPase (PP-l 21.3 2.1E+02 0.0046 22.1 4.2 64 84-147 56-121 (277)
380 COG4667 Predicted esterase of 21.2 1.2E+02 0.0027 24.1 3.1 41 118-159 28-69 (292)
381 PF01118 Semialdhyde_dh: Semia 21.0 1.7E+02 0.0036 19.8 3.5 31 131-162 1-32 (121)
382 COG0218 Predicted GTPase [Gene 21.0 3.8E+02 0.0083 20.4 7.2 62 62-134 70-141 (200)
383 KOG1578 Predicted carbonic anh 20.9 65 0.0014 25.5 1.6 32 117-148 141-172 (276)
384 PRK10416 signal recognition pa 20.9 4.9E+02 0.011 21.6 8.1 73 80-160 186-266 (318)
385 COG3621 Patatin [General funct 20.2 3.4E+02 0.0075 22.6 5.4 52 89-151 7-63 (394)
386 cd08633 PI-PLCc_eta2 Catalytic 20.2 2.6E+02 0.0057 22.2 4.7 23 67-89 59-81 (254)
387 cd00762 NAD_bind_malic_enz NAD 20.2 1.5E+02 0.0033 23.4 3.5 83 66-150 27-127 (254)
388 cd03378 beta_CA_cladeC Carboni 20.0 1.8E+02 0.004 21.0 3.6 30 116-145 78-107 (154)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.4e-39 Score=257.54 Aligned_cols=265 Identities=22% Similarity=0.236 Sum_probs=181.5
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ +|.+++|...|+ ++++|||+||+++++. .|..+++.|+++++|+++|+|
T Consensus 7 ~~~~~~~~~-~~~~i~y~~~G~--------------------~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dlp 64 (294)
T PLN02824 7 QVETRTWRW-KGYNIRYQRAGT--------------------SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLL 64 (294)
T ss_pred CCCCceEEE-cCeEEEEEEcCC--------------------CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCC
Confidence 456778888 699999988774 4589999999999999 999999999988999999999
Q ss_pred CCCCCCCCC-------CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 100 FFGGSITDE-------ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 100 G~G~s~~~~-------~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
|||.|+.+. ..++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~ 144 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKK 144 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccc
Confidence 999998654 2488999999999999999999999999999999999999999999999999997653211000
Q ss_pred ccccccccccccccccCc-----------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhc-c-
Q 020916 173 ETNLNRLGVSSSSELLLP-----------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI-S- 239 (320)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 239 (320)
...............+.. .........+...........++..+.+..... . ......+..+.. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 222 (294)
T PLN02824 145 QPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL-E-PGAVDVFLDFISYSG 222 (294)
T ss_pred cchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccC-C-chHHHHHHHHhcccc
Confidence 000000000000000000 000011111111111111111111111111000 0 000111111110 1
Q ss_pred --CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 240 --NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 240 --~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.....++++++|+++|+|++|..++.+..+.+.+..+ +.++++++++||++++|+|+++++.|.+|+++
T Consensus 223 ~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 223 GPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA--VEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC--ccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 1124577899999999999999999999988877766 78999999999999999999999999999976
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.9e-37 Score=245.59 Aligned_cols=263 Identities=18% Similarity=0.161 Sum_probs=180.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
.+++.+ +|.+++|+..+. ...+++|||+||++++.. .|..+++.|.+.|+|+++|+||||
T Consensus 4 ~~~~~~-~~~~~~~~~~~~------------------~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G 63 (276)
T TIGR02240 4 FRTIDL-DGQSIRTAVRPG------------------KEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVG 63 (276)
T ss_pred EEEecc-CCcEEEEEEecC------------------CCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCC
Confidence 456777 799999977431 024579999999999999 999999999888999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc-ccccccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN-ETNLNRLGV 181 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~ 181 (320)
.|+.+...++++.+++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++......... .......
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-- 141 (276)
T TIGR02240 64 GSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM-- 141 (276)
T ss_pred CCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh--
Confidence 9987666788999999999999999999999999999999999999999999999999998764221100 0000000
Q ss_pred cccccccCcCc-HHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh--hHHHHhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 182 SSSSELLLPNS-VKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK--ERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
........... .......+. ......+.....+......... ......... .......+.++++|+++|+|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~ 216 (276)
T TIGR02240 142 ASPRRYIQPSHGIHIAPDIYG----GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL-GWTSIHWLHKIQQPTLVLAGD 216 (276)
T ss_pred cCchhhhccccccchhhhhcc----ceeeccchhhhhhhhhcccCCCchHHHHHHHHc-CCchhhHhhcCCCCEEEEEeC
Confidence 00000000000 000000000 0000011111111111110000 000111111 111124468899999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhcc
Q 020916 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 315 (320)
+|++++++..+.+.+.++ +.+++++++ ||+++.++|+++++.|.+|+++..+..
T Consensus 217 ~D~~v~~~~~~~l~~~~~--~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 217 DDPIIPLINMRLLAWRIP--NAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred CCCcCCHHHHHHHHHhCC--CCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999998 889999985 999999999999999999999877654
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.3e-37 Score=245.73 Aligned_cols=266 Identities=16% Similarity=0.176 Sum_probs=177.8
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
..+.+++++ +|.+++|...| ++++|||+||++++.. .|+.+++.|.+.++|+++|+|
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G---------------------~g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~ 62 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETG---------------------EGDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLI 62 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeC---------------------CCCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCC
Confidence 455667777 79999998776 4589999999999999 999999999988999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc--cccc--
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI--NETN-- 175 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~-- 175 (320)
|||.|+.+...++.+.+++|+.+++++++.++++++|||+||.+|+.++.++|++|+++|++++........ ....
T Consensus 63 G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 142 (295)
T PRK03592 63 GMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRE 142 (295)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHH
Confidence 999999877678999999999999999999999999999999999999999999999999999843221100 0000
Q ss_pred -cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhh-----------ccC
Q 020916 176 -LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLL-----------ISN 240 (320)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------~~~ 240 (320)
...+....................+.... ...+.++....+...+. ...... .+...+. ..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (295)
T PRK03592 143 LFQALRSPGEGEEMVLEENVFIERVLPGSI--LRPLSDEEMAVYRRPFP-TPESRRPTLSWPRELPIDGEPADVVALVEE 219 (295)
T ss_pred HHHHHhCcccccccccchhhHHhhcccCcc--cccCCHHHHHHHHhhcC-CchhhhhhhhhhhhcCCCCcchhhHhhhhH
Confidence 00000000000000000000000000000 00111111111111111 000000 0000000 001
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHH-HHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNM-KEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
....+.++++|+|+|+|++|.++++.....+ .+..+ +.++++++++||+++.++|+++++.|.+|+++...
T Consensus 220 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 220 YAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN--QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh--hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 1234677899999999999999955444444 45566 88999999999999999999999999999997654
No 4
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-36 Score=228.73 Aligned_cols=274 Identities=18% Similarity=0.296 Sum_probs=191.6
Q ss_pred HhcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEe
Q 020916 17 KMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYI 95 (320)
Q Consensus 17 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~ 95 (320)
...+++.+++.. +|.+++|.+.++ +++|.|+++||++.+.. +|+.++..|+.. |+|+|
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g~-------------------~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA 76 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGGP-------------------GDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIA 76 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeecC-------------------CCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEe
Confidence 355788899999 689999988876 58999999999999999 999999999999 99999
Q ss_pred cCCCCCCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 96 PDLLFFGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 96 ~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
+|+||+|.|+.+.. .++...++.|+..++++++.++++++||+|||++|..+|..+|++|+++|+++.+...+.....
T Consensus 77 ~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~ 156 (322)
T KOG4178|consen 77 PDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPL 156 (322)
T ss_pred cCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchh
Confidence 99999999998874 5999999999999999999999999999999999999999999999999999987652111110
Q ss_pred ccccc-----c-----cccccccccC-cCcHHHHHHHHhHhhhc------------cccCCchhHHHHHHHHh-cChhhH
Q 020916 174 TNLNR-----L-----GVSSSSELLL-PNSVKGLKALLSVATYK------------KLWFPSCLYKDFLEVMF-ANRKER 229 (320)
Q Consensus 174 ~~~~~-----~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~ 229 (320)
..... . ......+... ....+.+...+...... ..|..++..+.+..... ......
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 00000 0 0000000000 00111111111100000 11222222222222221 112222
Q ss_pred HHHhhhhhccC--CCCCCCCCCCcEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHH
Q 020916 230 AELLEGLLISN--KDPTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 230 ~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
......+.... ....+..+++|+++|+|+.|.+.+.. ....+.+.++ ...+.++++|+||+++.|+|+++++.|.+
T Consensus 237 lNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp-~l~~~vv~~~~gH~vqqe~p~~v~~~i~~ 315 (322)
T KOG4178|consen 237 LNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVP-RLTERVVIEGIGHFVQQEKPQEVNQAILG 315 (322)
T ss_pred chhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhc-cccceEEecCCcccccccCHHHHHHHHHH
Confidence 33444444443 23566789999999999999998766 3445555666 23378899999999999999999999999
Q ss_pred HHHhhh
Q 020916 307 FLASLH 312 (320)
Q Consensus 307 fl~~~~ 312 (320)
|+++..
T Consensus 316 f~~~~~ 321 (322)
T KOG4178|consen 316 FINSFS 321 (322)
T ss_pred HHHhhc
Confidence 998753
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.2e-36 Score=247.82 Aligned_cols=269 Identities=24% Similarity=0.275 Sum_probs=174.3
Q ss_pred eEEEcCCCc-eeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 24 HAVEIEPGT-TMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
+++.. +|. +++|...|+.+. ...+|+|||+||++++.. .|..+++.|.+.|+|+++|+||||
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g~~---------------~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G 126 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSPEV---------------TSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFG 126 (360)
T ss_pred ceEEE-CCceeEEEEEecCccc---------------CCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCC
Confidence 44555 455 888877664100 014689999999999999 999999999888999999999999
Q ss_pred CCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEeccccccccccc-ccccccc
Q 020916 103 GSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSIN-ETNLNRL 179 (320)
Q Consensus 103 ~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~ 179 (320)
.|+.+. ..++++.+++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++......... .......
T Consensus 127 ~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~ 206 (360)
T PLN02679 127 ASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKL 206 (360)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhh
Confidence 998764 357899999999999999999999999999999999998874 7999999999998653221100 0000000
Q ss_pred ccc--ccccccC--c----------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhc---cCCC
Q 020916 180 GVS--SSSELLL--P----------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI---SNKD 242 (320)
Q Consensus 180 ~~~--~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 242 (320)
... ....... + .....+...+...........++..+.+. ...........+...... .+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (360)
T PLN02679 207 LLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPADDEGALDAFVSIVTGPPGPNPI 285 (360)
T ss_pred hcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhccCCChHHHHHHHHhcCCCCCHH
Confidence 000 0000000 0 00011111111111111111222222111 111111111111111110 1112
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHH-----HHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVEL-----AHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..++++++|+|+|+|++|.++|++. .+.+.+.++ ++++++++++||++++|+|+++++.|.+||+++.
T Consensus 286 ~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 286 KLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 3567899999999999999998763 234666677 8999999999999999999999999999998754
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.1e-36 Score=239.95 Aligned_cols=262 Identities=17% Similarity=0.205 Sum_probs=174.8
Q ss_pred cCCCceEEEcCCC-----ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ce
Q 020916 19 AGVQPHAVEIEPG-----TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YS 92 (320)
Q Consensus 19 ~~~~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~ 92 (320)
..+..++++++ + .+++|...|+ +++|+|||+||++++.. .|..+++.|.+. |+
T Consensus 17 ~~~~~~~~~~~-~~~~~~~~i~y~~~G~-------------------~~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~ 75 (302)
T PRK00870 17 YPFAPHYVDVD-DGDGGPLRMHYVDEGP-------------------ADGPPVLLLHGEPSWSY-LYRKMIPILAAAGHR 75 (302)
T ss_pred CCCCceeEeec-CCCCceEEEEEEecCC-------------------CCCCEEEEECCCCCchh-hHHHHHHHHHhCCCE
Confidence 35678888884 5 6899988774 35789999999999999 999999999876 99
Q ss_pred EEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 93 VYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
|+++|+||||.|+.+. ..++.+.+++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 155 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDG 155 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccc
Confidence 9999999999998654 34789999999999999999999999999999999999999999999999999875322111
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC-hhhHHHHhhhh-----------hc
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN-RKERAELLEGL-----------LI 238 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~ 238 (320)
........+. ...... +. ......+.... ......+....+....... ..........+ ..
T Consensus 156 ~~~~~~~~~~--~~~~~~-~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T PRK00870 156 PMPDAFWAWR--AFSQYS-PV--LPVGRLVNGGT--VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAAN 228 (302)
T ss_pred cchHHHhhhh--cccccC-ch--hhHHHHhhccc--cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHH
Confidence 0000000000 000000 00 00000000000 0001111111110000000 00000000000 00
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeE---EEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVT---FQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
......+.++++|+++|+|++|+++|... +.+.+.++ +.+ +.+++++||++++++|+++++.|.+|+++.
T Consensus 229 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~--~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 229 RAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIP--GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcc--cccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 00012467899999999999999999766 78888887 554 889999999999999999999999999764
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.1e-35 Score=234.11 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=170.0
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ +|.+++|...| ++++|||+||++.+.. .|..+++.|.+.|+|+++|+|
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G---------------------~~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~ 69 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEG---------------------TGPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYL 69 (286)
T ss_pred cccceEEEc-CCcEEEEEECC---------------------CCCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCC
Confidence 356678888 68899998766 4589999999998888 899999999888999999999
Q ss_pred CCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 100 FFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 100 G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|||.|+.+.. .++.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++...............
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 149 (286)
T PRK03204 70 GFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSR 149 (286)
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHH
Confidence 9999986643 578899999999999999999999999999999999999999999999999876542111100000000
Q ss_pred ccccc-cccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHh---hhhhc-----cCCCCCCC--C
Q 020916 179 LGVSS-SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELL---EGLLI-----SNKDPTVP--N 247 (320)
Q Consensus 179 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~--~ 247 (320)
..... ...... ........++.... ....++.....+. ...........+. ..+.. ......+. .
T Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T PRK03204 150 VMSSPPVQYAIL-RRNFFVERLIPAGT--EHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATL 225 (286)
T ss_pred Hhccccchhhhh-hhhHHHHHhccccc--cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhc
Confidence 00000 000000 00000000000000 0011111111111 0000000000000 00000 00000111 1
Q ss_pred CCCcEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 248 FPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+++|+++|+|++|.++++. ..+.+.+.++ +.++++++++||++++|+|+++++.|.+|+
T Consensus 226 ~~~PtliI~G~~D~~~~~~~~~~~~~~~ip--~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 226 GTKPTLLVWGMKDVAFRPKTILPRLRATFP--DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCCeEEEecCCCcccCcHHHHHHHHHhcC--CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 2899999999999988654 5788889998 899999999999999999999999999997
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=2.5e-35 Score=232.20 Aligned_cols=238 Identities=18% Similarity=0.184 Sum_probs=155.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
|+|||+||+++++. .|..+++.|.++|+|+++|+||||.|.... .++.+++++++. .+..++++++||||||.+
T Consensus 14 ~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~~~lvGhS~Gg~i 87 (256)
T PRK10349 14 VHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDKAIWLGWSLGGLV 87 (256)
T ss_pred CeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCCeEEEEECHHHHH
Confidence 57999999999999 999999999988999999999999998543 456666666554 356789999999999999
Q ss_pred HHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh
Q 020916 144 SFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
++.+|.++|++|+++|++++.+.................................++.......... ......+.....
T Consensus 88 a~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 166 (256)
T PRK10349 88 ASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA-RQDARALKKTVL 166 (256)
T ss_pred HHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH-HHHHHHHHHHhh
Confidence 9999999999999999998754322110000000000000000000000011111111110010000 011111111111
Q ss_pred cCh-h---hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH
Q 020916 224 ANR-K---ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299 (320)
Q Consensus 224 ~~~-~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 299 (320)
... . ........+...+....+.++++|+++|+|++|.++|.+..+.+.+.++ ++++++++++||++++|+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~--~~~~~~i~~~gH~~~~e~p~~ 244 (256)
T PRK10349 167 ALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFISHPAE 244 (256)
T ss_pred ccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHH
Confidence 100 0 0011111112223345678899999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 020916 300 YNRCLKQFLAS 310 (320)
Q Consensus 300 ~~~~i~~fl~~ 310 (320)
|++.|.+|-++
T Consensus 245 f~~~l~~~~~~ 255 (256)
T PRK10349 245 FCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHhcc
Confidence 99999998654
No 9
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.2e-34 Score=231.65 Aligned_cols=261 Identities=16% Similarity=0.180 Sum_probs=178.2
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
..+++++ +|.+++|...++ ..+|+|||+||++++.. .|..+++.|.+.|+|+++|+|||
T Consensus 7 ~~~~~~~-~~~~~~~~~~g~-------------------~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~ 65 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDMGP-------------------TAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGH 65 (278)
T ss_pred ccceeeE-CCEEEEEEecCC-------------------CCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCC
Confidence 4566777 799999988775 35789999999999999 99999999988899999999999
Q ss_pred CCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccc
Q 020916 102 GGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 102 G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
|.|+.+.. .++++.+++++.+++++++.++++|+||||||.+++.++.++|++++++|++++.................
T Consensus 66 G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 145 (278)
T TIGR03056 66 GFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMA 145 (278)
T ss_pred CCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhh
Confidence 99987665 68999999999999999998899999999999999999999999999999998765321111000000000
Q ss_pred ccccccccCc-------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhhccCCCCCCCCCCC
Q 020916 181 VSSSSELLLP-------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 181 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 250 (320)
.......... ............ ........... +............ ..............++++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 221 (278)
T TIGR03056 146 RVLACNPFTPPMMSRGAADQQRVERLIRD---TGSLLDKAGMT-YYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITI 221 (278)
T ss_pred HhhhhcccchHHHHhhcccCcchhHHhhc---cccccccchhh-HHHHhhcCchhhhHHHHHhhcccccchhhhcccCCC
Confidence 0000000000 000000000000 00000111111 1111111100000 11111111111245678899
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
|+++|+|++|..+|.+..+.+.+.++ +.++++++++||+++.+.|+++++.|.+|++
T Consensus 222 P~lii~g~~D~~vp~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 222 PLHLIAGEEDKAVPPDESKRAATRVP--TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CEEEEEeCCCcccCHHHHHHHHHhcc--CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999888 8999999999999999999999999999984
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=8.3e-35 Score=232.82 Aligned_cols=243 Identities=19% Similarity=0.281 Sum_probs=156.6
Q ss_pred CCCeEEEEcCCCCCccccHHHH---HHHhhcc-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ---VGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~---~~~l~~~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
++|+|||+||++.+.. .|..+ +..|.+. |+|+++|+||||.|+..... .....+++++.++++.++.++++++|
T Consensus 29 ~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG 107 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVG 107 (282)
T ss_pred CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEE
Confidence 4678999999998877 77643 4455554 99999999999999865322 12224688999999999999999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
|||||.+++.++.++|++|+++|++++............... ...............+...................+
T Consensus 108 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (282)
T TIGR03343 108 NSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEG--IKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQ 185 (282)
T ss_pred ECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHH--HHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHH
Confidence 999999999999999999999999987532111000000000 000000000001111111111111111111222111
Q ss_pred HHHHHHhcChhhHHHHhhh-----hhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 217 DFLEVMFANRKERAELLEG-----LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
...............+... +...+....++++++|+++++|++|.+++++..+.+.+.++ ++++++++++||+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~--~~~~~~i~~agH~ 263 (282)
T TIGR03343 186 GRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP--DAQLHVFSRCGHW 263 (282)
T ss_pred hHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC--CCEEEEeCCCCcC
Confidence 1111111111111111111 00111123567899999999999999999999999999998 9999999999999
Q ss_pred cccCChHHHHHHHHHHHH
Q 020916 292 VHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~ 309 (320)
++.|+|+.+++.|.+|++
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 999999999999999986
No 11
>PLN02578 hydrolase
Probab=100.00 E-value=1.4e-34 Score=237.09 Aligned_cols=243 Identities=24% Similarity=0.332 Sum_probs=163.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++++|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.+...++.+.+++++.++++.+..++++++|||+||
T Consensus 85 ~g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg 163 (354)
T PLN02578 85 EGLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGG 163 (354)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHH
Confidence 4678999999999988 999999999888999999999999999887778999999999999999988999999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccc-cccccccccCcCc------------------HHHHHHHHhH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL-GVSSSSELLLPNS------------------VKGLKALLSV 202 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~~ 202 (320)
.+++.+|.++|++|+++|++++................ ............. ..........
T Consensus 164 ~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (354)
T PLN02578 164 FTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKS 243 (354)
T ss_pred HHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999876543221110000000 0000000000000 0000000000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhH---HHHhhhhh----ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKER---AELLEGLL----ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 275 (320)
.........+...+.+... ....... ......+. .......++++++|+++|+|++|.+++.+..+.+.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~ 322 (354)
T PLN02578 244 VYKDKSNVDDYLVESITEP-AADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY 322 (354)
T ss_pred hcCCcccCCHHHHHHHHhc-ccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000000111111111000 0011111 11111111 11122456789999999999999999999999999999
Q ss_pred CCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 276 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+ +.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 323 p--~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 323 P--DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred C--CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 8 8899999 58999999999999999999986
No 12
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=6.6e-35 Score=229.19 Aligned_cols=238 Identities=18% Similarity=0.175 Sum_probs=160.8
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC-CcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg 141 (320)
+|||+||++.+.. .|+.+++.|.+. |+|+++|+||||.|+.+.. .++.+.+++|+.++++.++. ++++|+||||||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 4999999999999 999999999655 9999999999999986543 57899999999999999987 499999999999
Q ss_pred HHHHHHHHhCccccccEEEeccccccccccccccccc-c-cccccccc----cCcCcHH--HH-HHHHhHhhhccccCCc
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR-L-GVSSSSEL----LLPNSVK--GL-KALLSVATYKKLWFPS 212 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~-~~~~~~~~----~~~~~~~--~~-~~~~~~~~~~~~~~~~ 212 (320)
.+++.++.++|++|+++|++++............... . ........ ....... .. ........+... +.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQS--PL 161 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCC--CH
Confidence 9999999999999999999998642111100000000 0 00000000 0000000 00 001111111110 10
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.... ............ . .... ......+..+++|+++|+|++|.++|++..+.+.+.++ ++++++++++||++
T Consensus 162 ~~~~-~~~~~~~~~~~~-~-~~~~--~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~--~a~~~~i~~~GH~~ 234 (255)
T PLN02965 162 EDYT-LSSKLLRPAPVR-A-FQDL--DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP--PAQTYVLEDSDHSA 234 (255)
T ss_pred HHHH-HHHHhcCCCCCc-c-hhhh--hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC--cceEEEecCCCCch
Confidence 0000 111111110000 0 0011 01122455789999999999999999999999999998 89999999999999
Q ss_pred ccCChHHHHHHHHHHHHhhh
Q 020916 293 HLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 293 ~~~~~~~~~~~i~~fl~~~~ 312 (320)
+.|+|+++++.|.+|++.+.
T Consensus 235 ~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 235 FFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999998764
No 13
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=5e-34 Score=234.48 Aligned_cols=267 Identities=17% Similarity=0.182 Sum_probs=166.9
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH--HHHHHh--------hccceEEecCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ--FQVGAL--------TKKYSVYIPDLL 99 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~--~~~~~l--------~~~~~vi~~d~~ 99 (320)
+|.+++|...|+...++ ..+.+|+|||+||++++.. .|. .+.+.| .++|+|+++|+|
T Consensus 48 ~g~~i~y~~~G~~~~~~------------~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~ 114 (360)
T PRK06489 48 PELRLHYTTLGTPHRNA------------DGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGI 114 (360)
T ss_pred CCceEEEEecCCCCccc------------ccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCC
Confidence 67888888777410000 0011789999999999887 775 455444 555999999999
Q ss_pred CCCCCCCCCC-------CCChhHHHHHHHHHH-HHhCCCcEE-EEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 100 FFGGSITDEA-------DRSPTFQAQCLATGL-AKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 100 G~G~s~~~~~-------~~~~~~~~~~l~~~l-~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
|||.|+.+.. .++++++++++.+++ +++++++++ |+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 115 GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~ 194 (360)
T PRK06489 115 GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG 194 (360)
T ss_pred CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH
Confidence 9999986543 378889998888854 889998885 8999999999999999999999999999875422111
Q ss_pred ccc---cc-cccccc-cccccccCcCcHHHHHHHHhH---h------hhccccCCchhHHHHHHHHh----cC-hhhHHH
Q 020916 171 INE---TN-LNRLGV-SSSSELLLPNSVKGLKALLSV---A------TYKKLWFPSCLYKDFLEVMF----AN-RKERAE 231 (320)
Q Consensus 171 ~~~---~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~ 231 (320)
... .. ...... ..................... . ..............+..... .. ......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
T PRK06489 195 RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLY 274 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHH
Confidence 000 00 000000 000000000001011111100 0 00000011111111221111 00 111111
Q ss_pred HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH--HHHHHHhCCCCeEEEEecCC----CcccccCChHHHHHHHH
Q 020916 232 LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA--HNMKEQLGADHVTFQGIKKA----GHLVHLERPCAYNRCLK 305 (320)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~ 305 (320)
........+....+.+|++|+|+|+|++|.++|++.. +.+.+.++ +.++++++++ ||.++ ++|+++++.|.
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip--~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~ 351 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK--HGRLVLIPASPETRGHGTT-GSAKFWKAYLA 351 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc--CCeEEEECCCCCCCCcccc-cCHHHHHHHHH
Confidence 1111112233356788999999999999999998875 78899998 8999999996 99997 89999999999
Q ss_pred HHHHhhh
Q 020916 306 QFLASLH 312 (320)
Q Consensus 306 ~fl~~~~ 312 (320)
+||+++.
T Consensus 352 ~FL~~~~ 358 (360)
T PRK06489 352 EFLAQVP 358 (360)
T ss_pred HHHHhcc
Confidence 9998764
No 14
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=231.29 Aligned_cols=257 Identities=15% Similarity=0.156 Sum_probs=170.4
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~ 108 (320)
.+|.+++|...|+ +++++|||+||++.+.. .|+.+++.|++.|+|+++|+||||.|+.+.
T Consensus 112 ~~~~~~~y~~~G~-------------------~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~ 171 (383)
T PLN03084 112 SDLFRWFCVESGS-------------------NNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQ 171 (383)
T ss_pred CCceEEEEEecCC-------------------CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCc
Confidence 4788898887775 35789999999999999 999999999888999999999999998765
Q ss_pred C----CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccccc
Q 020916 109 A----DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSS 184 (320)
Q Consensus 109 ~----~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
. .++.+.+++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|+++++....................
T Consensus 172 ~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~ 251 (383)
T PLN03084 172 PGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLL 251 (383)
T ss_pred ccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHh
Confidence 3 479999999999999999999999999999999999999999999999999998743211000000000000000
Q ss_pred ccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh---hHHHHhhhhhccC------CC--CCCCCCCCcEE
Q 020916 185 SELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK---ERAELLEGLLISN------KD--PTVPNFPQRVH 253 (320)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~--~~~~~~~~P~l 253 (320)
...+...........+.. .......++....+...+..... ....+...+.... .. .....+++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 252 GEIFSQDPLRASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPIT 329 (383)
T ss_pred hhhhhcchHHHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEE
Confidence 000000000000000000 00000111111111111110000 0000111110000 00 01135799999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|+|+.|.+++.+..+.+.+. . +.++++++++||+++.|+|+++++.|.+|+.+
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~-~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKS-S--QHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHh-c--CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999988888876 4 78999999999999999999999999999863
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.5e-33 Score=233.70 Aligned_cols=268 Identities=16% Similarity=0.218 Sum_probs=170.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH-HHHHhh----ccceEEecC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF-QVGALT----KKYSVYIPD 97 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~-~~~~l~----~~~~vi~~d 97 (320)
..++.+ +|.+|+|...+++.. +.+++|||+||++++.. .|.. +++.|. ..|+|+++|
T Consensus 178 ~~~~~~-~~~~l~~~~~gp~~~----------------~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~D 239 (481)
T PLN03087 178 TSWLSS-SNESLFVHVQQPKDN----------------KAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVD 239 (481)
T ss_pred eeeEee-CCeEEEEEEecCCCC----------------CCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEEC
Confidence 344555 578899988776321 24689999999999998 8985 446665 359999999
Q ss_pred CCCCCCCCCCC-CCCChhHHHHHHH-HHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc-
Q 020916 98 LLFFGGSITDE-ADRSPTFQAQCLA-TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET- 174 (320)
Q Consensus 98 ~~G~G~s~~~~-~~~~~~~~~~~l~-~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~- 174 (320)
+||||.|+.+. ..++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 240 l~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~ 319 (481)
T PLN03087 240 LLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQAT 319 (481)
T ss_pred CCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHH
Confidence 99999998764 4488999999994 89999999999999999999999999999999999999999765432211100
Q ss_pred --ccccccccc-cccccCcCcHHHHHHHHhHhhh----cc---------ccCCchhHHHHHHHHhcC-hhhHHHHhhhhh
Q 020916 175 --NLNRLGVSS-SSELLLPNSVKGLKALLSVATY----KK---------LWFPSCLYKDFLEVMFAN-RKERAELLEGLL 237 (320)
Q Consensus 175 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (320)
......... +...........+......... .. ...+........+..... .......+..+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i 399 (481)
T PLN03087 320 QYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNII 399 (481)
T ss_pred HHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHH
Confidence 000000000 0000000000000000000000 00 000000000000000000 000000000000
Q ss_pred cc-------CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc-CChHHHHHHHHHHHH
Q 020916 238 IS-------NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLA 309 (320)
Q Consensus 238 ~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 309 (320)
.. .......++++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++. ++|+++++.|.+|.+
T Consensus 400 ~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP--~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 400 CGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP--RARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred hchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC--CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 00 0001123689999999999999999999999999998 8999999999999885 999999999999986
Q ss_pred h
Q 020916 310 S 310 (320)
Q Consensus 310 ~ 310 (320)
.
T Consensus 478 ~ 478 (481)
T PLN03087 478 R 478 (481)
T ss_pred c
Confidence 5
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2e-34 Score=236.22 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=168.5
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
.+...+||.+|+|...+++. ...+++|||+||++++....|..+++.|++. |+|+++|+||||
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~----------------~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G 127 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPEN----------------SRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFG 127 (349)
T ss_pred eeEEcCCCCEEEEEEEecCC----------------CCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCC
Confidence 33444577777776655421 1357899999999988662468899999876 999999999999
Q ss_pred CCCCCCCC-CChhHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-c
Q 020916 103 GSITDEAD-RSPTFQAQCLATGLAKLGVD------KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE-T 174 (320)
Q Consensus 103 ~s~~~~~~-~~~~~~~~~l~~~l~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~ 174 (320)
.|+.+... .+++.+++|+.++++.+... +++|+||||||.+++.++.++|++++++|+++|.......... .
T Consensus 128 ~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~ 207 (349)
T PLN02385 128 LSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP 207 (349)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch
Confidence 99865432 57888999999999887532 7999999999999999999999999999999986543221100 0
Q ss_pred cccccc--ccc-ccc-ccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH---HhcCh---hhHHHHhhhhhccCCCCC
Q 020916 175 NLNRLG--VSS-SSE-LLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV---MFANR---KERAELLEGLLISNKDPT 244 (320)
Q Consensus 175 ~~~~~~--~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~ 244 (320)
...... ... ... ...+.. .+.. ..+........... ..... ......+... .+....
T Consensus 208 ~~~~~~~~~~~~~p~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 274 (349)
T PLN02385 208 LVLQILILLANLLPKAKLVPQK--DLAE---------LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT--QEIEMQ 274 (349)
T ss_pred HHHHHHHHHHHHCCCceecCCC--cccc---------ccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH--HHHHHh
Confidence 000000 000 000 000000 0000 00000000000000 00000 0000111100 111235
Q ss_pred CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH----HHHHHHHHHHhhh
Q 020916 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA----YNRCLKQFLASLH 312 (320)
Q Consensus 245 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~ 312 (320)
+.++++|+|+|+|++|.++|++..+.+.+.++..++++++++++||+++.++|++ +.+.|.+||++..
T Consensus 275 l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 275 LEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred cccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 6788999999999999999999999999988534789999999999999998876 8888999998764
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.9e-33 Score=221.66 Aligned_cols=237 Identities=19% Similarity=0.224 Sum_probs=162.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
+++|+|||+||++++.. .|..++..|.++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++|+|||||
T Consensus 14 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~G 91 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIGHSMG 91 (255)
T ss_pred CCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEEECHH
Confidence 57899999999999999 99999999988899999999999999864 45789999999999999999999999999999
Q ss_pred HHHHHHHHHhCccccccEEEeccccccccccc-ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSIN-ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
|.+++.+|.++|++|+++|++++.+....... ........ ..... ...........+.. .........+.
T Consensus 92 g~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~ 162 (255)
T PRK10673 92 GKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAIN--AVSEA-GATTRQQAAAIMRQ------HLNEEGVIQFL 162 (255)
T ss_pred HHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHH--Hhhhc-ccccHHHHHHHHHH------hcCCHHHHHHH
Confidence 99999999999999999999986432211000 00000000 00000 00000000000000 00111111111
Q ss_pred HHHhcChh---hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 220 EVMFANRK---ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
........ .................++.+++|+|+|+|++|..++.+..+.+.+.++ ++++++++++||++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~ 240 (255)
T PRK10673 163 LKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP--QARAHVIAGAGHWVHAEK 240 (255)
T ss_pred HhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCeeeccC
Confidence 11100000 0000000111111123566789999999999999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 020916 297 PCAYNRCLKQFLAS 310 (320)
Q Consensus 297 ~~~~~~~i~~fl~~ 310 (320)
|+++++.|.+||++
T Consensus 241 p~~~~~~l~~fl~~ 254 (255)
T PRK10673 241 PDAVLRAIRRYLND 254 (255)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999975
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=2e-33 Score=221.97 Aligned_cols=241 Identities=20% Similarity=0.275 Sum_probs=164.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
.++|+|||+||+++++. .|..+++.|.++|+|+++|+||||.|..+. ..++.+++++++.+++++++.++++++||||
T Consensus 11 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~ 89 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHAL 89 (257)
T ss_pred CCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 36789999999999999 999999999888999999999999998654 4578999999999999999999999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc---hhHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS---CLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 216 (320)
||.+++.++.++|++|+++|++++................. ....... ..+........+...+... ....
T Consensus 90 Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (257)
T TIGR03611 90 GGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIA---LLQHAGP---EAYVHAQALFLYPADWISENAARLAA 163 (257)
T ss_pred hHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHH---HHhccCc---chhhhhhhhhhccccHhhccchhhhh
Confidence 99999999999999999999998754321111000000000 0000000 0000000000000000000 0000
Q ss_pred HHHHHHh--cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 217 DFLEVMF--ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 217 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
....... ............+...+....+.++++|+++++|++|.++|++..+.+.+.++ +.+++.++++||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~ 241 (257)
T TIGR03611 164 DEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP--NAQLKLLPYGGHASNV 241 (257)
T ss_pred hhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC--CceEEEECCCCCCccc
Confidence 0000000 00001111112222223335677889999999999999999999999999988 8899999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 020916 295 ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~ 310 (320)
++|+++++.|.+||++
T Consensus 242 ~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 242 TDPETFNRALLDFLKT 257 (257)
T ss_pred cCHHHHHHHHHHHhcC
Confidence 9999999999999863
No 19
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=3.3e-32 Score=216.86 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=164.0
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++..+||.+|.|..+.+. +..++.|+++||+++++. .|..+++.|.+. |+|+++|+||||.
T Consensus 4 ~~~~~~g~~l~~~~~~~~-----------------~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~ 65 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-----------------TYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGR 65 (276)
T ss_pred eeecCCCCEEEEEeccCC-----------------CCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCC
Confidence 445558999999766541 135677788899999999 999999999887 9999999999999
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 104 SITDEA-DRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 104 s~~~~~-~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|+.... ..++..+++|+.+.++.+ ...+++|+||||||.+|+.+|.++|++++++|+++|............+..
T Consensus 66 S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~ 145 (276)
T PHA02857 66 SNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAA 145 (276)
T ss_pred CCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHH
Confidence 975432 235566677777777654 345899999999999999999999999999999998653211000000000
Q ss_pred c----cc-cccccccCcCcH-HHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 179 L----GV-SSSSELLLPNSV-KGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 179 ~----~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
. .. ........+... ....... ................+.... .. . .......+.++++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~-~-~~~~~~~l~~i~~Pv 212 (276)
T PHA02857 146 KLMGIFYPNKIVGKLCPESVSRDMDEVY-KYQYDPLVNHEKIKAGFASQV----------LK-A-TNKVRKIIPKIKTPI 212 (276)
T ss_pred HHHHHhCCCCccCCCCHhhccCCHHHHH-HHhcCCCccCCCccHHHHHHH----------HH-H-HHHHHHhcccCCCCE
Confidence 0 00 000000000000 0000000 000000000000000000000 00 0 001123567899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHhh
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLASL 311 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 311 (320)
|+|+|++|.++|++.++.+.+.+. .++++++++++||.++.|.+ +++.+.+.+||++.
T Consensus 213 liv~G~~D~i~~~~~~~~l~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 213 LILQGTNNEISDVSGAYYFMQHAN-CNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEecCCCCcCChHHHHHHHHHcc-CCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875 36899999999999998865 57999999999874
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=9.9e-33 Score=217.12 Aligned_cols=236 Identities=21% Similarity=0.281 Sum_probs=164.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++|+|||+||++.+.. .|..+++.|.+.|+|+++|+||||.|..+...++.+++++++.++++.++.++++++|||+||
T Consensus 12 ~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg 90 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGG 90 (251)
T ss_pred CCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchH
Confidence 6789999999999999 999999999877999999999999998766678999999999999999998899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHH-HHHHhHhhhccccC--CchhHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGL-KALLSVATYKKLWF--PSCLYKDF 218 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~ 218 (320)
.+++.+|.++|++++++|++++......... ...... . ......... ....... ...... .......+
T Consensus 91 ~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~--~~~~~~--~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 161 (251)
T TIGR02427 91 LIAQGLAARRPDRVRALVLSNTAAKIGTPES--WNARIA--A----VRAEGLAALADAVLERW-FTPGFREAHPARLDLY 161 (251)
T ss_pred HHHHHHHHHCHHHhHHHhhccCccccCchhh--HHHHHh--h----hhhccHHHHHHHHHHHH-cccccccCChHHHHHH
Confidence 9999999999999999999987643221100 000000 0 000000000 0001000 011000 11111111
Q ss_pred HHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 219 LEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 219 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
...... ...........+...+....+.++++|+++++|++|..+|.+..+.+.+.++ +.++++++++||++++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p 239 (251)
T TIGR02427 162 RNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP--GARFAEIRGAGHIPCVEQP 239 (251)
T ss_pred HHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--CceEEEECCCCCcccccCh
Confidence 111111 1111111111111122224567789999999999999999999999999888 8899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 020916 298 CAYNRCLKQFLA 309 (320)
Q Consensus 298 ~~~~~~i~~fl~ 309 (320)
+++.+.|.+|++
T Consensus 240 ~~~~~~i~~fl~ 251 (251)
T TIGR02427 240 EAFNAALRDFLR 251 (251)
T ss_pred HHHHHHHHHHhC
Confidence 999999999973
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1.1e-32 Score=215.55 Aligned_cols=235 Identities=21% Similarity=0.248 Sum_probs=151.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|..+.. .+++.+++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999999 9999999994 59999999999999986553 58899999999999999999999999999999
Q ss_pred HHHHHHHhCccc-cccEEEecccccccccccccccccccccccccccCcCc-HHHHHHHHhHhhhccccCCchhHHHHHH
Q 020916 143 VSFKVAELYPNL-VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNS-VKGLKALLSVATYKKLWFPSCLYKDFLE 220 (320)
Q Consensus 143 ~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (320)
+|+.+|.++|+. |++++++++.......... .........+...+.... ...+..++...... .........+..
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 155 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEER-QARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA--SLNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHH-HHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh--ccCccHHHHHHH
Confidence 999999999664 9999998876532221100 000000000000000000 01111111000000 011111222211
Q ss_pred HHhc-ChhhHHHHhhhhh---ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 221 VMFA-NRKERAELLEGLL---ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 221 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.... ............. ..+....+.++++|+++|+|++|+.+. .+.+. . ++++++++++||+++.|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~--~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-L--ALPLHVIPNAGHNAHREN 227 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-h--cCeEEEeCCCCCchhhhC
Confidence 1111 1111111111110 111224567899999999999998542 23333 3 689999999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q 020916 297 PCAYNRCLKQFLASL 311 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~ 311 (320)
|+++++.|.+|++.+
T Consensus 228 p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 228 PAAFAASLAQILRLI 242 (242)
T ss_pred hHHHHHHHHHHHhhC
Confidence 999999999999753
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.4e-32 Score=221.17 Aligned_cols=263 Identities=14% Similarity=0.130 Sum_probs=169.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
..++...||.+|+|+...+... .+.+++|||+||++.+....|..++..|.+. |+|+++|+|||
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~---------------~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGh 98 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSS---------------SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGH 98 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCC---------------CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCC
Confidence 4456667999999977654211 0256789999999866432577788889876 99999999999
Q ss_pred CCCCCCCC-CCChhHHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 102 GGSITDEA-DRSPTFQAQCLATGLAKLGV------DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 102 G~s~~~~~-~~~~~~~~~~l~~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
|.|..... ..+.+.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++...........
T Consensus 99 G~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 99 GRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 99975433 35788889999999998753 369999999999999999999999999999999865432211000
Q ss_pred c-cccccccccccccCcCcHHHHHHHHhHhhhc--cccCCc----hhHHHHHHH---HhcChh---hHHHHhhhhhccCC
Q 020916 175 N-LNRLGVSSSSELLLPNSVKGLKALLSVATYK--KLWFPS----CLYKDFLEV---MFANRK---ERAELLEGLLISNK 241 (320)
Q Consensus 175 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~ 241 (320)
. .... ......+....... ...... .....+... .+.... ....+.... ...
T Consensus 179 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 243 (330)
T PLN02298 179 WPIPQI-------------LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT--DYL 243 (330)
T ss_pred hHHHHH-------------HHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH--HHH
Confidence 0 0000 00000000000000 000000 000000000 000000 000111100 011
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH----HHHHHHHHHHHhhhhcc
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC----AYNRCLKQFLASLHADE 315 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~~~ 315 (320)
...+.++++|+|+|+|++|.++|++..+.+.+.++..++++++++++||.++.++|+ ++.+.|.+||.+...++
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 235678899999999999999999999999888754478999999999999988775 57778889998876443
No 23
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.8e-31 Score=216.75 Aligned_cols=265 Identities=13% Similarity=0.062 Sum_probs=169.5
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
+.+...+.. ||.+++|...+++ ..+++||++||++++.. .|..++..|.+. |+|+++|+
T Consensus 30 ~~~~~~~~~-~g~~l~~~~~~~~------------------~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~ 89 (330)
T PRK10749 30 REEAEFTGV-DDIPIRFVRFRAP------------------HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDH 89 (330)
T ss_pred ccceEEEcC-CCCEEEEEEccCC------------------CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcC
Confidence 334444444 8999999887641 25679999999999888 899999888766 99999999
Q ss_pred CCCCCCCCCCC------CCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 99 LFFGGSITDEA------DRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 99 ~G~G~s~~~~~------~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
||||.|..+.. ..+++++++|+.++++.+ +..+++++||||||.+++.++.++|++++++|+++|.....
T Consensus 90 ~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 90 RGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIV 169 (330)
T ss_pred CCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccC
Confidence 99999975432 147889999999999886 56789999999999999999999999999999998865332
Q ss_pred cccccccccc----cc-ccccccc--cCcCcHHHHHHHHhHhhhccccC--CchhHHHHHHHHhcChhh-----HHHHhh
Q 020916 169 DSINETNLNR----LG-VSSSSEL--LLPNSVKGLKALLSVATYKKLWF--PSCLYKDFLEVMFANRKE-----RAELLE 234 (320)
Q Consensus 169 ~~~~~~~~~~----~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~ 234 (320)
.......... .. ....... ...... ........+. ..+....+.+.+...... ...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PRK10749 170 LPLPSWMARRILNWAEGHPRIRDGYAIGTGRW-------RPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVR 242 (330)
T ss_pred CCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCC-------CCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHH
Confidence 1111000000 00 0000000 000000 0000000000 011111111111111000 000000
Q ss_pred -hhhc-cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC-----CCCeEEEEecCCCcccccCCh---HHHHHHH
Q 020916 235 -GLLI-SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG-----ADHVTFQGIKKAGHLVHLERP---CAYNRCL 304 (320)
Q Consensus 235 -~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~---~~~~~~i 304 (320)
.+.. ......+.++++|+|+|+|++|.+++++.++.+.+.++ ..++++++++|+||.++.|.+ +.+.+.|
T Consensus 243 ~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i 322 (330)
T PRK10749 243 ESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAI 322 (330)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHH
Confidence 0000 01113467789999999999999999999888888763 135689999999999998875 6788899
Q ss_pred HHHHHhh
Q 020916 305 KQFLASL 311 (320)
Q Consensus 305 ~~fl~~~ 311 (320)
.+||++.
T Consensus 323 ~~fl~~~ 329 (330)
T PRK10749 323 VDFFNRH 329 (330)
T ss_pred HHHHhhc
Confidence 9999764
No 24
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=1.1e-32 Score=216.00 Aligned_cols=237 Identities=18% Similarity=0.204 Sum_probs=153.9
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
.|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|... ...+++++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 488999999999999 99999999988899999999999998754 3456777766665543 36899999999999
Q ss_pred HHHHHHHhCccccccEEEeccccccccccccc-ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINET-NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
+++.++.++|++++++|++++.+......... .........+..............+......... ........+...
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTP-TARQDARALKQT 156 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC-ccchHHHHHHHH
Confidence 99999999999999999998765432111000 0000000000000000000011111111100000 011111111111
Q ss_pred HhcC----hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 222 MFAN----RKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 222 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
.... .......+..+...+....+.++++|+++++|++|.++|.+..+.+.+.++ ++++++++++||++++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p 234 (245)
T TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIFAKAAHAPFLSHA 234 (245)
T ss_pred hhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCH
Confidence 1100 011111222222222234567899999999999999999999999999988 8999999999999999999
Q ss_pred HHHHHHHHHHH
Q 020916 298 CAYNRCLKQFL 308 (320)
Q Consensus 298 ~~~~~~i~~fl 308 (320)
+++++.|.+|+
T Consensus 235 ~~~~~~i~~fi 245 (245)
T TIGR01738 235 EAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhhC
Confidence 99999999985
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=224.05 Aligned_cols=265 Identities=17% Similarity=0.178 Sum_probs=165.9
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc-----------cHHHHHH---H
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV-----------TWQFQVG---A 86 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~-----------~~~~~~~---~ 86 (320)
+.....++ +|.+++|...|+ .++++||+||+.++... .|..+++ .
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~--------------------~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~ 94 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP--------------------AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRA 94 (343)
T ss_pred eeecCCCC-CCceEEEEEecc--------------------CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCc
Confidence 34444455 678888877763 34457777766665541 4788886 5
Q ss_pred hh-ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 87 LT-KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 87 l~-~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
|. ++|+||++|+||||.|. ...++..++++|+.++++++++++. +|+||||||++|+.+|.++|++|+++|++++.
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~--~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSL--DVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred cCccccEEEEEeCCCCCCCC--CCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 74 56999999999999884 3356788899999999999999774 79999999999999999999999999999986
Q ss_pred ccccccccccccccccc-ccccccc--CcCcHHHHHHH----------HhHhhhcccc-CC---chhHHHHHHH----Hh
Q 020916 165 LAMTDSINETNLNRLGV-SSSSELL--LPNSVKGLKAL----------LSVATYKKLW-FP---SCLYKDFLEV----MF 223 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~-~~---~~~~~~~~~~----~~ 223 (320)
........ ........ ....... ........... +......... .. ......++.. ..
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 251 (343)
T PRK08775 173 HRAHPYAA-AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYV 251 (343)
T ss_pred ccCCHHHH-HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHH
Confidence 53221100 00000000 0000000 00000000000 0000000000 00 0111111111 10
Q ss_pred --cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC-CCcccccCChHHH
Q 020916 224 --ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK-AGHLVHLERPCAY 300 (320)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~ 300 (320)
........+..... .....+.++++|+|+|+|++|.++|++..+.+.+.++ .+.+++++++ +||++++|+|++|
T Consensus 252 ~~~~~~~~~~~~~~~~--~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 252 ARTPVNAYLRLSESID--LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred HhcChhHHHHHHHHHh--hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHHH
Confidence 00011111111111 1123467899999999999999999999999998883 2889999984 9999999999999
Q ss_pred HHHHHHHHHhhh
Q 020916 301 NRCLKQFLASLH 312 (320)
Q Consensus 301 ~~~i~~fl~~~~ 312 (320)
++.|.+||++..
T Consensus 329 ~~~l~~FL~~~~ 340 (343)
T PRK08775 329 DAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=219.67 Aligned_cols=281 Identities=30% Similarity=0.378 Sum_probs=180.4
Q ss_pred hcCCCceEEEcCCC--ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceE
Q 020916 18 MAGVQPHAVEIEPG--TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSV 93 (320)
Q Consensus 18 ~~~~~~~~~~~~~g--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v 93 (320)
...+....+++..| ....-|...... +....+..+++||++|||+++.. .|+.++..|.+. +.|
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~-----------~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v 89 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDK-----------YGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRV 89 (326)
T ss_pred eccccceEEEcccCCceeEEEEecccee-----------ccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEE
Confidence 34556677777766 333334433200 00011247899999999999999 999999999999 999
Q ss_pred EecCCCCCCCCC-CCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEE---Eeccccccc
Q 020916 94 YIPDLLFFGGSI-TDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV---VSGSILAMT 168 (320)
Q Consensus 94 i~~d~~G~G~s~-~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv---l~~~~~~~~ 168 (320)
+++|++|+|.++ .+. ..++..++++.+..+......++++++|||+||.+|+.+|+.+|+.|+++| ++++.....
T Consensus 90 ~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 90 LAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred EEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccC
Confidence 999999999544 333 338888999999999999888899999999999999999999999999999 555554433
Q ss_pred ccccccccccccc-cccccccCcCcHHHHHHHHhHhh----hccccCCchhHHHHHHHHhc------ChhhHHHHhhhhh
Q 020916 169 DSINETNLNRLGV-SSSSELLLPNSVKGLKALLSVAT----YKKLWFPSCLYKDFLEVMFA------NRKERAELLEGLL 237 (320)
Q Consensus 169 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 237 (320)
+............ ........+.........+.... ...........+........ ....+..++....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 3221111111110 00000001000000011000000 00001111111111111111 1111122222222
Q ss_pred c--cCCCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 238 I--SNKDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 238 ~--~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
. ......+.++. ||+++++|++|+++|.+.+..+.+.++ ++++++++++||.+++|.|+++++.|..|+.+..
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 1 12223456666 999999999999999999999999998 9999999999999999999999999999998753
No 27
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=3.8e-32 Score=222.25 Aligned_cols=264 Identities=14% Similarity=0.165 Sum_probs=162.5
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH---HHhhc-cceEEecCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV---GALTK-KYSVYIPDLLFFGGSI 105 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~---~~l~~-~~~vi~~d~~G~G~s~ 105 (320)
+|.+++|...|+... +..|+||++||++++.. .|..++ +.|.. +|+||++|+||||.|+
T Consensus 24 ~~~~l~y~~~G~~~~----------------~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~ 86 (339)
T PRK07581 24 PDARLAYKTYGTLNA----------------AKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSS 86 (339)
T ss_pred CCceEEEEecCccCC----------------CCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCC
Confidence 688899988875110 23466777777777766 666554 46764 4999999999999998
Q ss_pred CCCC---CCChhH-----HHHHHHH----HHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 106 TDEA---DRSPTF-----QAQCLAT----GLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 106 ~~~~---~~~~~~-----~~~~l~~----~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
.+.. .++.+. +++++.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~ 166 (339)
T PRK07581 87 SPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNF 166 (339)
T ss_pred CCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHH
Confidence 6542 233332 4556554 678899999 47999999999999999999999999999987654221100
Q ss_pred c---cccccccc-cccccccC----cCcHHHHHHHHhH-----hhhccc-c--CC----chhHHHHHHHHhc--ChhhHH
Q 020916 173 E---TNLNRLGV-SSSSELLL----PNSVKGLKALLSV-----ATYKKL-W--FP----SCLYKDFLEVMFA--NRKERA 230 (320)
Q Consensus 173 ~---~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~-~--~~----~~~~~~~~~~~~~--~~~~~~ 230 (320)
. .....+.. ..+..... ............. ...... . .. +.....+...... ......
T Consensus 167 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (339)
T PRK07581 167 VFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLL 246 (339)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHH
Confidence 0 00000000 00000000 0011111111100 000000 0 00 1111112222111 111111
Q ss_pred HHhhhhhc----------cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC-CCcccccCChHH
Q 020916 231 ELLEGLLI----------SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK-AGHLVHLERPCA 299 (320)
Q Consensus 231 ~~~~~~~~----------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~ 299 (320)
..+..+.. .+....+.++++|+|+|+|++|..+|++..+.+.+.++ +++++++++ +||+++.+++++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip--~a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 247 AMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP--NAELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred HHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCeEEEeCCCCCccccccCcHH
Confidence 11111110 11224567899999999999999999999999999998 899999998 999999999999
Q ss_pred HHHHHHHHHHhhh
Q 020916 300 YNRCLKQFLASLH 312 (320)
Q Consensus 300 ~~~~i~~fl~~~~ 312 (320)
++..|.+||+++-
T Consensus 325 ~~~~~~~~~~~~~ 337 (339)
T PRK07581 325 DIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-31 Score=204.75 Aligned_cols=249 Identities=19% Similarity=0.236 Sum_probs=160.5
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD----RSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
..++++|+|||+|++.. .|-.-.+.|++.++|+++|++|+|.|+.|.-. .....+++.+.++....++++.+|+|
T Consensus 88 ~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvG 166 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVG 166 (365)
T ss_pred cCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEee
Confidence 47889999999999999 99999999999999999999999999988733 23346788888898999999999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEeccccccccc-cccccc---cccc--ccccccccCc--------CcHHHHHHHHhH
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS-INETNL---NRLG--VSSSSELLLP--------NSVKGLKALLSV 202 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~---~~~~--~~~~~~~~~~--------~~~~~~~~~~~~ 202 (320)
||+||+++..+|.++|++|+.|||++|....... ...... ..+. .......+.+ .....+...+..
T Consensus 167 HSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~ 246 (365)
T KOG4409|consen 167 HSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRP 246 (365)
T ss_pred ccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhH
Confidence 9999999999999999999999999998765432 110000 0000 0000000000 000011111111
Q ss_pred hhhcc--ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC------CCCCCC--CCcEEEEecCCCCCCCHHHHHHHH
Q 020916 203 ATYKK--LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD------PTVPNF--PQRVHLLWGEDDQIFNVELAHNMK 272 (320)
Q Consensus 203 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~ 272 (320)
..+.. ....++.+-+|.-............+..+...... ..+..+ +||+++|+|++|.+ +......+.
T Consensus 247 d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~ 325 (365)
T KOG4409|consen 247 DRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVT 325 (365)
T ss_pred HHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHH
Confidence 11111 01112222222222222222222222222111111 222333 49999999999965 455555555
Q ss_pred HHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 273 EQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 273 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+.+....++.++++++||.+..++|+.|++.|.++++..
T Consensus 326 ~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 326 KSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 544435799999999999999999999999999998763
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=6.2e-31 Score=207.41 Aligned_cols=239 Identities=17% Similarity=0.157 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGh 137 (320)
+++|+|||+||++.+.. .|..++..|.+. |+|+++|+||||.|.... ...+++++++++.++++.+. .++++|+||
T Consensus 16 ~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 16 RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 37889999999999999 999999999875 999999999999875433 34789999999999999985 579999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEeccccccccccccc-cccccc-ccccccc-----cC-c----CcHHHHHHHHhHhhh
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET-NLNRLG-VSSSSEL-----LL-P----NSVKGLKALLSVATY 205 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-----~~-~----~~~~~~~~~~~~~~~ 205 (320)
||||.++..++..+|++|+++|++++........... ...... ....... .. . ........+.....+
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILY 174 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHh
Confidence 9999999999999999999999998754311100000 000000 0000000 00 0 000000000000000
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEE
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
.. .+.+. ..+......... ...+...........+ ++|+++|.|++|..+|++..+.+.+.++ ..+++.
T Consensus 175 ~~--~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~~~~~ 244 (273)
T PLN02211 175 QM--SPQED-STLAAMLLRPGP-----ILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--PSQVYE 244 (273)
T ss_pred cC--CCHHH-HHHHHHhcCCcC-----ccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC--ccEEEE
Confidence 00 01111 111111110000 0011111111123344 7899999999999999999999999988 678999
Q ss_pred ecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 285 IKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 285 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++ +||.+++++|+++++.|.++....
T Consensus 245 l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 245 LE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 97 799999999999999999887653
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=3.9e-31 Score=218.21 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=167.4
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc-------------HHHHH----HHhhccce
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT-------------WQFQV----GALTKKYS 92 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~-------------~~~~~----~~l~~~~~ 92 (320)
+|.+++|...|.+. .+.+|+|||+||++++.. . |..++ ..+.++|+
T Consensus 31 ~~~~~~y~~~G~~~----------------~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~ 93 (379)
T PRK00175 31 PPVELAYETYGTLN----------------ADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYF 93 (379)
T ss_pred CCceEEEEeccccC----------------CCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceE
Confidence 56677888877421 124789999999999887 4 66665 23355699
Q ss_pred EEecCCCCC-CCCCCCC--------------CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccc
Q 020916 93 VYIPDLLFF-GGSITDE--------------ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQ 156 (320)
Q Consensus 93 vi~~d~~G~-G~s~~~~--------------~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~ 156 (320)
||++|++|+ |.|+.+. ..++++++++++.++++++++++ ++++||||||.+++.+|.++|++|+
T Consensus 94 vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~ 173 (379)
T PRK00175 94 VICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVR 173 (379)
T ss_pred EEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhh
Confidence 999999983 5443221 14789999999999999999999 5899999999999999999999999
Q ss_pred cEEEeccccccccccccc---ccccccc-cccc--cc----cCcCcHHHH---------------HHHHhHhhhccc---
Q 020916 157 AMVVSGSILAMTDSINET---NLNRLGV-SSSS--EL----LLPNSVKGL---------------KALLSVATYKKL--- 208 (320)
Q Consensus 157 ~lvl~~~~~~~~~~~~~~---~~~~~~~-~~~~--~~----~~~~~~~~~---------------~~~~~~~~~~~~--- 208 (320)
++|++++........... ....... ..+. .. ..+...... ...+........
T Consensus 174 ~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~ 253 (379)
T PRK00175 174 SALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPF 253 (379)
T ss_pred EEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccccccccc
Confidence 999999876433211000 0000000 0000 00 000000000 000000000000
Q ss_pred cC-CchhHHHHHHH----Hh--cChhhHHHHhhhhhccC--------CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 209 WF-PSCLYKDFLEV----MF--ANRKERAELLEGLLISN--------KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 209 ~~-~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
+. .......+... .. ............+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~ 333 (379)
T PRK00175 254 GFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVD 333 (379)
T ss_pred CCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHH
Confidence 00 00111111110 11 11111111111111111 224567899999999999999999999999999
Q ss_pred HhCCCCe----EEEEec-CCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 274 QLGADHV----TFQGIK-KAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 274 ~~~~~~~----~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.++ +. ++++++ ++||++++++|+++++.|.+||+++..+
T Consensus 334 ~i~--~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 334 ALL--AAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred HHH--hcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 998 54 778775 9999999999999999999999987654
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.98 E-value=8.3e-31 Score=217.80 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=169.4
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
...+.+ ++.+++|...++ +++++|||+||++++.. .|..+.+.|.+.|+|+++|+||||
T Consensus 111 ~~~~~~-~~~~i~~~~~g~-------------------~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G 169 (371)
T PRK14875 111 PRKARI-GGRTVRYLRLGE-------------------GDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHG 169 (371)
T ss_pred CCcceE-cCcEEEEecccC-------------------CCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCC
Confidence 344555 477788776664 36789999999999999 999999999888999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVS 182 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
.|.......+++++++++.++++.++..+++++|||+||.+++.+|..+|+++.++|++++........ ......+.
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~-~~~~~~~~-- 246 (371)
T PRK14875 170 ASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN-GDYIDGFV-- 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc-hhHHHHhh--
Confidence 997665668899999999999999998899999999999999999999999999999998764322110 00000000
Q ss_pred ccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-cChhh-HHHHhhhhhc-----cCCCCCCCCCCCcEEEE
Q 020916 183 SSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-ANRKE-RAELLEGLLI-----SNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~P~l~i 255 (320)
.......+...+....................... ..... ...+...... .+....+.+++||++++
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 320 (371)
T PRK14875 247 ------AAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVI 320 (371)
T ss_pred ------cccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEE
Confidence 00001111111111111111111111111111100 00000 0000000000 11112456789999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|++|.++|++..+.+ . .+.++.+++++||++++++|+++++.|.+|+++
T Consensus 321 ~g~~D~~vp~~~~~~l----~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 321 WGEQDRIIPAAHAQGL----P-DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EECCCCccCHHHHhhc----c-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999998765443 2 368899999999999999999999999999975
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.98 E-value=5e-32 Score=209.92 Aligned_cols=221 Identities=31% Similarity=0.445 Sum_probs=152.6
Q ss_pred EEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|..+. ..++.+++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999999 999999999766999999999999998766 35788999999999999999999999999999999
Q ss_pred HHHHHHhCccccccEEEeccccccccccc----ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 144 SFKVAELYPNLVQAMVVSGSILAMTDSIN----ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
++.++.++|++|+++|++++......... ...+... ................. .+..........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 148 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRL---------LAWRSRSLRRLASRFFY--RWFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH--HHHTHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhh---------hhccccccccccccccc--cccccccccccc
Confidence 99999999999999999998874332110 0000000 00000000000000000 000111111111
Q ss_pred HHHhcChhhHHHHhhh-hhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH
Q 020916 220 EVMFANRKERAELLEG-LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298 (320)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 298 (320)
... .......... ....+....++.+++|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|+
T Consensus 149 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 149 RSS---RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTHHHHSHH
T ss_pred ccc---ccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCccHHHCHH
Confidence 110 0000000000 00111113456678999999999999999999999999988 99999999999999999999
Q ss_pred HHHHH
Q 020916 299 AYNRC 303 (320)
Q Consensus 299 ~~~~~ 303 (320)
+++++
T Consensus 224 ~~~~a 228 (228)
T PF12697_consen 224 EVAEA 228 (228)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 98864
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=3.2e-31 Score=217.28 Aligned_cols=262 Identities=16% Similarity=0.182 Sum_probs=164.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc----------cHHHHH---HHh-hccceEEe
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV----------TWQFQV---GAL-TKKYSVYI 95 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~----------~~~~~~---~~l-~~~~~vi~ 95 (320)
+|.+|+|...|++.. ..+++|||+||+++++.. .|..++ ..| .++|+|++
T Consensus 14 ~~~~~~y~~~g~~~~----------------~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~ 77 (351)
T TIGR01392 14 SDVRVAYETYGTLNA----------------ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVC 77 (351)
T ss_pred CCceEEEEeccccCC----------------CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEE
Confidence 688899988875211 246899999999997641 377776 244 45599999
Q ss_pred cCCCC--CCCCCCCC------------CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEE
Q 020916 96 PDLLF--FGGSITDE------------ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 96 ~d~~G--~G~s~~~~------------~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
+|+|| ||.|.... ..++++++++++.+++++++.++ ++|+||||||.+++.+|.++|++|+++|+
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl 157 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVV 157 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEE
Confidence 99999 56554311 13788999999999999999998 99999999999999999999999999999
Q ss_pred ecccccccccccccc---cccccc-ccccc--ccC---cCcHHHHHHHHhHhh----------hccccCCc---------
Q 020916 161 SGSILAMTDSINETN---LNRLGV-SSSSE--LLL---PNSVKGLKALLSVAT----------YKKLWFPS--------- 212 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~---~~~~~~-~~~~~--~~~---~~~~~~~~~~~~~~~----------~~~~~~~~--------- 212 (320)
+++............ ...... ..... ... +.........+.... +.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 237 (351)
T TIGR01392 158 LATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDT 237 (351)
T ss_pred EccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCc
Confidence 998764332110000 000000 00000 000 000000000000000 00000000
Q ss_pred -hhHHHHHH----HHhc--ChhhHHHHhhhhhccC-------CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC
Q 020916 213 -CLYKDFLE----VMFA--NRKERAELLEGLLISN-------KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD 278 (320)
Q Consensus 213 -~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 278 (320)
...+.+.. .... +..........+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-- 315 (351)
T TIGR01392 238 RFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP-- 315 (351)
T ss_pred cchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh--
Confidence 00111111 1111 1111111111222111 124677899999999999999999999999999998
Q ss_pred CeEEE-----EecCCCcccccCChHHHHHHHHHHHH
Q 020916 279 HVTFQ-----GIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 279 ~~~~~-----~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+.+++ +++++||++++++|+++++.|.+||+
T Consensus 316 ~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 316 AAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred hcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 55544 45789999999999999999999984
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=3.3e-30 Score=213.39 Aligned_cols=261 Identities=16% Similarity=0.210 Sum_probs=161.9
Q ss_pred ceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCC-C----hhHHHHHHHHHHH
Q 020916 51 KIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADR-S----PTFQAQCLATGLA 125 (320)
Q Consensus 51 ~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~-~----~~~~~~~l~~~l~ 125 (320)
+.++..+.+++++|+|||+||++++.. .|...+..|.++|+|+++|+||||.|+.+.... + .+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 444555555667899999999999888 888888999888999999999999998654321 1 1235677788888
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-cccccccc---ccc-----ccccCcC-----
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE-TNLNRLGV---SSS-----SELLLPN----- 191 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~---~~~-----~~~~~~~----- 191 (320)
.++.++++|+||||||.+++.+|.++|++|+++|++++.......... ........ ... ...+.+.
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 888899999999999999999999999999999999876543221110 00000000 000 0000000
Q ss_pred ----cHHHHHHHHhHhhhc---cccCCchh---HHHHHHHHhcChhhH---HHHhhh---hhccCCCCCCCCCCCcEEEE
Q 020916 192 ----SVKGLKALLSVATYK---KLWFPSCL---YKDFLEVMFANRKER---AELLEG---LLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 192 ----~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~P~l~i 255 (320)
............... ......+. ..+++.......... ...... +...+....+.++++|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 000000111000000 00011111 111111111111010 011110 11122234577889999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
+|++|.+.+ .....+.+... ..+++++++++||+++.|+|++|++.|.+|++.....
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999998765 44555555553 3688999999999999999999999999999876543
No 35
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=3.6e-30 Score=206.81 Aligned_cols=259 Identities=18% Similarity=0.159 Sum_probs=162.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
.+.+ +|.++.|...+. .+.+++|||+||++++....|..+...|.+. |+|+++|+||||.
T Consensus 6 ~~~~-~~~~~~~~~~~~------------------~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGG------------------EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY 66 (288)
T ss_pred eecC-CCCeEEEEeccC------------------CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 3455 577788876653 1346899999998766652556666777764 9999999999999
Q ss_pred CCCCCC---CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc--ccccc
Q 020916 104 SITDEA---DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE--TNLNR 178 (320)
Q Consensus 104 s~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~ 178 (320)
|..+.. .++.+.+++++.+++++++.++++++|||+||.+++.++.++|++++++|++++.......... .....
T Consensus 67 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 146 (288)
T TIGR01250 67 SDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKE 146 (288)
T ss_pred CCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhh
Confidence 986542 2788999999999999999889999999999999999999999999999998875432111000 00000
Q ss_pred ccc---ccccccc--CcCcHHHHHHHHhHhh----hccccCCchhHHHHHHHHhcChhhHHHHh---------hhhhccC
Q 020916 179 LGV---SSSSELL--LPNSVKGLKALLSVAT----YKKLWFPSCLYKDFLEVMFANRKERAELL---------EGLLISN 240 (320)
Q Consensus 179 ~~~---~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 240 (320)
... ....... ................ ..... ........... ......... ..+...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T TIGR01250 147 LPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRK-WPEALKHLKSG---MNTNVYNIMQGPNEFTITGNLKDWD 222 (288)
T ss_pred cChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhccccc-chHHHHHHhhc---cCHHHHhcccCCccccccccccccC
Confidence 000 0000000 0000000000000000 00000 00000000000 000000000 0000111
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
....+.++++|+++++|++|.+ +++..+.+.+.++ +.++++++++||+++.++|+++++.|.+||+
T Consensus 223 ~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 223 ITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA--GSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc--CCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 2235677899999999999985 6678888888888 8899999999999999999999999999984
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=7.4e-30 Score=200.66 Aligned_cols=242 Identities=26% Similarity=0.368 Sum_probs=155.7
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--CCCChhHHHHH-HHHHHHHhCCCcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--ADRSPTFQAQC-LATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~-l~~~l~~~~~~~~~lvGhS~ 139 (320)
+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|..+. ...++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999 999999999966999999999999997654 34678888888 77888888888999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHH-hHhhhcc-ccCCchhHHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALL-SVATYKK-LWFPSCLYKD 217 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 217 (320)
||.+++.+|.++|++|++++++++............. ..........+.......+...+ ....+.. ...+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAAR-RQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhh-hhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 9999999999999999999999876543221110000 00000000000000000000000 0000000 0011111111
Q ss_pred HHHHHh-cChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 218 FLEVMF-ANRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 218 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
+..... .........+..... ......+..+++|+++++|++|..++ +..+.+.+..+ +.++++++++||+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~ 235 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP--NLTLVIIANAGHNIH 235 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC--CCcEEEEcCCCCCcC
Confidence 111111 111111111111100 11113456789999999999998764 55667777777 899999999999999
Q ss_pred cCChHHHHHHHHHHHH
Q 020916 294 LERPCAYNRCLKQFLA 309 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~ 309 (320)
+++|+++++.|.+|++
T Consensus 236 ~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 236 LENPEAFAKILLAFLE 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 9999999999999983
No 37
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=8.7e-30 Score=240.72 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=163.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--------CCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--------ADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.... ..++++.+++++.+++++++.++++
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5689999999999999 999999999888999999999999997542 2467889999999999999999999
Q ss_pred EEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc---ccC
Q 020916 134 LVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK---LWF 210 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 210 (320)
|+||||||.+++.++.++|++|+++|++++.+......... ............+.... ...+........ ...
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~-~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARK-IRSAKDDSRARMLIDHG---LEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHH-HHhhhhhHHHHHHHhhh---HHHHHHHhccHHHhhhhc
Confidence 99999999999999999999999999998754322111000 00000000000000000 011111110000 000
Q ss_pred CchhHHHHHHHHh--cChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC-------
Q 020916 211 PSCLYKDFLEVMF--ANRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD------- 278 (320)
Q Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~------- 278 (320)
............. .........+..+.. .+....+.++++|+|+|+|++|..++ +..+.+.+.++..
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~ 1603 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDK 1603 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccc
Confidence 0111111111111 111111112222111 11224578899999999999999875 6667777777611
Q ss_pred ---CeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 279 ---HVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 279 ---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.+++++++++||++++|+|+++++.|.+||++....
T Consensus 1604 ~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1604 GKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred cccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 258999999999999999999999999999987654
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=6.6e-29 Score=203.85 Aligned_cols=239 Identities=15% Similarity=0.173 Sum_probs=153.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC----CcEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV----DKCVLV 135 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~----~~~~lv 135 (320)
.+++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.... ..+.+.+++|+.++++.+.. .+++++
T Consensus 135 ~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 213 (395)
T PLN02652 135 MRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLF 213 (395)
T ss_pred CceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5679999999999888 899999999876 9999999999999986543 24777888999999988752 379999
Q ss_pred EeChhHHHHHHHHHhCc---cccccEEEecccccccccccc-cccccccccccccccCcCcHHHHHHHHhHhhhccccCC
Q 020916 136 GFSYGGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINE-TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP 211 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (320)
||||||.+++.++. +| ++++++|+.+|.......... ...................... .......
T Consensus 214 GhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~---------~~~~s~~ 283 (395)
T PLN02652 214 GHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKR---------GIPVSRD 283 (395)
T ss_pred EECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccc---------cCCcCCC
Confidence 99999999998765 55 379999999886532211000 0000000000000000000000 0000000
Q ss_pred chhHHHHHHH-Hh-c-Ch--hhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEec
Q 020916 212 SCLYKDFLEV-MF-A-NR--KERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286 (320)
Q Consensus 212 ~~~~~~~~~~-~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
.......... .. . .. .......... ......+.++++|+|+++|++|.++|++.++.+++.+...+.++++++
T Consensus 284 ~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ 361 (395)
T PLN02652 284 PAALLAKYSDPLVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYD 361 (395)
T ss_pred HHHHHHHhcCCCcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEEC
Confidence 0000000000 00 0 00 0000000000 011235678899999999999999999999999998764468899999
Q ss_pred CCCcccccC-ChHHHHHHHHHHHHhhhh
Q 020916 287 KAGHLVHLE-RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 287 ~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 313 (320)
+++|.++.+ +++++.+.|.+||++...
T Consensus 362 ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 362 GFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 999999776 789999999999987653
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=2.4e-29 Score=202.64 Aligned_cols=124 Identities=18% Similarity=0.228 Sum_probs=103.3
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc-cceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK-KYSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-~~~vi~~d~~G 100 (320)
...++...||.+|+|...++ +++++|||+||++++.. .+ .+...+.. .|+|+++|+||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-------------------~~~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G 63 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-------------------PDGKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRG 63 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-------------------CCCCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCC
Confidence 45688888899999988774 35678999999887765 43 34445544 49999999999
Q ss_pred CCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 101 FGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 101 ~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
||.|..+.. ..+.+++++++..++++++.++++++||||||.+++.++.++|++|+++|++++...
T Consensus 64 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 64 CGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999986542 356778899999999999999999999999999999999999999999999987653
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=8.3e-29 Score=195.77 Aligned_cols=265 Identities=21% Similarity=0.184 Sum_probs=174.3
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
......||..+.|+...... +...+||++||++.+.. .|..++..|... |.|+++|+||||
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~-----------------~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG 73 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPE-----------------PPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHG 73 (298)
T ss_pred ceeecCCCceEEEEeecCCC-----------------CCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCC
Confidence 33444489999998776521 23489999999999999 999999999998 999999999999
Q ss_pred CCC-CCCC-CCChhHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 103 GSI-TDEA-DRSPTFQAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 103 ~s~-~~~~-~~~~~~~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
.|. .... ..+++++..|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|.............
T Consensus 74 ~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~ 153 (298)
T COG2267 74 RSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLIL 153 (298)
T ss_pred CCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHH
Confidence 997 3332 3558889999999998875 358999999999999999999999999999999998866530000000
Q ss_pred ccc---cccccccccCcCcHHHHHHHHhHhhhccccC--CchhHHHHHHHHh-cCh-hhHHHHhhhhhccC--CCCCCCC
Q 020916 177 NRL---GVSSSSELLLPNSVKGLKALLSVATYKKLWF--PSCLYKDFLEVMF-ANR-KERAELLEGLLISN--KDPTVPN 247 (320)
Q Consensus 177 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~~~~ 247 (320)
... ....+...+.... . . .......+. .....+.+.+... ... .....+...+.... .......
T Consensus 154 ~~~~~~~~~~~~p~~~~~~-~-~-----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~ 226 (298)
T COG2267 154 ARLALKLLGRIRPKLPVDS-N-L-----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPA 226 (298)
T ss_pred HHHhcccccccccccccCc-c-c-----ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcccc
Confidence 000 0000000000000 0 0 000000000 0111111111110 000 00111111111111 2234667
Q ss_pred CCCcEEEEecCCCCCCC-HHHHHHHHHHhCCCCeEEEEecCCCcccccC-Ch--HHHHHHHHHHHHhhhh
Q 020916 248 FPQRVHLLWGEDDQIFN-VELAHNMKEQLGADHVTFQGIKKAGHLVHLE-RP--CAYNRCLKQFLASLHA 313 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~--~~~~~~i~~fl~~~~~ 313 (320)
+++|+|+++|++|.+++ .+...++.+.....++++++++|+.|.++.| +. +++.+.+.+|+.+...
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 89999999999999999 6888888888775678999999999999977 44 7889999999987653
No 41
>PLN02511 hydrolase
Probab=99.97 E-value=1.8e-29 Score=208.24 Aligned_cols=273 Identities=12% Similarity=0.096 Sum_probs=166.8
Q ss_pred CCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d 97 (320)
.+.+.+.++||..+.+ |....... ...++|+||++||+++++...| ..++..+.+. |+|+++|
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~--------------~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d 136 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRA--------------LPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFN 136 (388)
T ss_pred eeEEEEECCCCCEEEEEecCccccc--------------CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4566788889999887 43211000 1136789999999987765234 4566555444 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCccc--cccEEEecccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKLGV----DKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDSI 171 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~ 171 (320)
+||||.|............++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++.......
T Consensus 137 ~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~ 216 (388)
T PLN02511 137 SRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD 216 (388)
T ss_pred cCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH
Confidence 99999997654433345567888888888764 5799999999999999999999987 88888887655321000
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHh--hhc--cccCCc------hhHHHHHHHHhc---ChhhHHHHhhhhhc
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVA--TYK--KLWFPS------CLYKDFLEVMFA---NRKERAELLEGLLI 238 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~ 238 (320)
...... ............+.+..... ... ..+... ....++.+.+.. .......++ ..
T Consensus 217 -~~~~~~-----~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy---~~ 287 (388)
T PLN02511 217 -EDFHKG-----FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYY---SN 287 (388)
T ss_pred -HHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHH---HH
Confidence 000000 00000000000111111100 000 000000 111111111110 001111111 11
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHH-HHHHHHhCCCCeEEEEecCCCcccccCChHH------HHHHHHHHHHhh
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELA-HNMKEQLGADHVTFQGIKKAGHLVHLERPCA------YNRCLKQFLASL 311 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~ 311 (320)
.+....+.++++|+|+|+|++|+++|.+.. ....+..+ ++++++++++||..++|+|+. +.+.+.+||+.+
T Consensus 288 ~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 288 SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 233457888999999999999999997754 44566666 999999999999999999875 589999999887
Q ss_pred hhcccCC
Q 020916 312 HADEQFT 318 (320)
Q Consensus 312 ~~~~~~~ 318 (320)
.....++
T Consensus 366 ~~~~~~~ 372 (388)
T PLN02511 366 EEGKSST 372 (388)
T ss_pred HHhcccc
Confidence 6554443
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=9.5e-30 Score=191.18 Aligned_cols=259 Identities=16% Similarity=0.129 Sum_probs=173.7
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
..+++..+|..+....+.+.. +.+.+..|+++||++......|..++..|+.. |.|+++|++||
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~---------------~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~Gh 93 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLS---------------GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGH 93 (313)
T ss_pred eeeEEcCCCCEeEEEecccCC---------------CCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCC
Confidence 344555567777664443311 11356789999999988743888899999998 99999999999
Q ss_pred CCCCCCCCC-CChhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 102 GGSITDEAD-RSPTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 102 G~s~~~~~~-~~~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
|.|+..... .+++..++|+....+... ..+..++||||||.+++.++.++|+..+|+|+++|.+...+...+.
T Consensus 94 G~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~ 173 (313)
T KOG1455|consen 94 GRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPH 173 (313)
T ss_pred CcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCC
Confidence 999977654 678888999988888642 2379999999999999999999999999999999998765554322
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhcc------ccCCchhHHHHHHH-Hh--cCh---hhHHHHhhhhhccCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKK------LWFPSCLYKDFLEV-MF--ANR---KERAELLEGLLISNKD 242 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~--~~~---~~~~~~~~~~~~~~~~ 242 (320)
......... +..++......+ ....+...+..... .+ ... ....++++.- .+..
T Consensus 174 p~v~~~l~~------------l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~--~~le 239 (313)
T KOG1455|consen 174 PPVISILTL------------LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVT--ADLE 239 (313)
T ss_pred cHHHHHHHH------------HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHH--HHHH
Confidence 211110000 000000000000 00000011111100 00 000 0111111110 1223
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc----CChHHHHHHHHHHHHh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL----ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 310 (320)
..+.++++|.+++||++|.++.++.++.+++..++.+.++..|||.-|.++. ++.+.+...|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999998889999999999999885 3446788888899875
No 43
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=1.8e-29 Score=177.24 Aligned_cols=251 Identities=14% Similarity=0.093 Sum_probs=175.1
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d 97 (320)
......+.+ +|++|+|..+|. ....|++++|..++....|.+++..|.+. +.|+++|
T Consensus 20 ~~te~kv~v-ng~ql~y~~~G~--------------------G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawD 78 (277)
T KOG2984|consen 20 DYTESKVHV-NGTQLGYCKYGH--------------------GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWD 78 (277)
T ss_pred hhhhheeee-cCceeeeeecCC--------------------CCceeEecccccccccccCCHHHHhcCCCCceEEEEEC
Confidence 344556777 799999999995 55679999999887766888888777665 9999999
Q ss_pred CCCCCCCCCCCCCCChhHH---HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQ---AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
.||+|.|.+|...+..+.. +++...+++.++.+++.++|+|-||..|+..|+++++.|.++|+.++...........
T Consensus 79 PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma 158 (277)
T KOG2984|consen 79 PPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMA 158 (277)
T ss_pred CCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHH
Confidence 9999999988877665554 5566777888999999999999999999999999999999999998876443221111
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
.... .....+........ ..+..+.+......+. ....++...-...-.+..+++++||+|
T Consensus 159 ~kgi---------------Rdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wv---D~v~qf~~~~dG~fCr~~lp~vkcPtl 220 (277)
T KOG2984|consen 159 FKGI---------------RDVNKWSARGRQPYEDHYGPETFRTQWAAWV---DVVDQFHSFCDGRFCRLVLPQVKCPTL 220 (277)
T ss_pred Hhch---------------HHHhhhhhhhcchHHHhcCHHHHHHHHHHHH---HHHHHHhhcCCCchHhhhcccccCCee
Confidence 0000 00000000000000 0001111111111110 000111110001112357899999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
|++|+.|++++...+-.+....+ .+++.+.|.++|.+++..+++|+..+.+||++.
T Consensus 221 i~hG~kDp~~~~~hv~fi~~~~~--~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 221 IMHGGKDPFCGDPHVCFIPVLKS--LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred EeeCCcCCCCCCCCccchhhhcc--cceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999888888888877 899999999999999999999999999999863
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=6.2e-28 Score=172.51 Aligned_cols=224 Identities=19% Similarity=0.245 Sum_probs=162.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGh 137 (320)
.+..||||||+.++.+ ..+.+.+.|.++ |.|.+|.+||||.....--..++++|.+++.+..+++ +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 4489999999999999 999999999999 9999999999999875545677888877777766655 5778999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||||.+++.+|..+| ++++|.++++........ ..+.+...+...... .....+..++
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~-------------------iie~~l~y~~~~kk~-e~k~~e~~~~ 150 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI-------------------IIEGLLEYFRNAKKY-EGKDQEQIDK 150 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchh-------------------hhHHHHHHHHHhhhc-cCCCHHHHHH
Confidence 999999999999998 899999998874322110 011111111111110 1112223333
Q ss_pred HHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC-
Q 020916 218 FLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE- 295 (320)
Q Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~- 295 (320)
.+..+.. .......+..-+ .+....+..|..|++++.|.+|+.+|.+.+..+.+...+...++..++++||.+..+
T Consensus 151 e~~~~~~~~~~~~~~~~~~i--~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 151 EMKSYKDTPMTTTAQLKKLI--KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDK 228 (243)
T ss_pred HHHHhhcchHHHHHHHHHHH--HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecch
Confidence 3333321 111111111111 122346778899999999999999999999999999887789999999999998876
Q ss_pred ChHHHHHHHHHHHHh
Q 020916 296 RPCAYNRCLKQFLAS 310 (320)
Q Consensus 296 ~~~~~~~~i~~fl~~ 310 (320)
..+.+.+.|..||+.
T Consensus 229 Erd~v~e~V~~FL~~ 243 (243)
T COG1647 229 ERDQVEEDVITFLEK 243 (243)
T ss_pred hHHHHHHHHHHHhhC
Confidence 578999999999973
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=2.6e-28 Score=214.75 Aligned_cols=260 Identities=16% Similarity=0.206 Sum_probs=161.4
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS 104 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s 104 (320)
.+.. ||.+|+|+..++ +++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|
T Consensus 7 ~~~~-~g~~l~~~~~g~-------------------~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S 65 (582)
T PRK05855 7 VVSS-DGVRLAVYEWGD-------------------PDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRS 65 (582)
T ss_pred EEee-CCEEEEEEEcCC-------------------CCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCC
Confidence 3444 799999988875 35789999999999999 99999999977799999999999999
Q ss_pred CCCC--CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhC--ccccccEEEecccccccccccccccccc
Q 020916 105 ITDE--ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 105 ~~~~--~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
..+. ..++.+++++|+..++++++..+ ++|+||||||.+++.++.+. ++++..++.++++..... ......
T Consensus 66 ~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~- 141 (582)
T PRK05855 66 SAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV---GFWLRS- 141 (582)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH---HHHHhh-
Confidence 8654 35789999999999999998765 99999999999998887662 344555554443221000 000000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCch--------hHHHHHHHHh-------------cC-hhhHHHHhhhhh
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSC--------LYKDFLEVMF-------------AN-RKERAELLEGLL 237 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-------------~~-~~~~~~~~~~~~ 237 (320)
...............................+.. ......+... .. ......+.....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (582)
T PRK05855 142 GLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMI 221 (582)
T ss_pred cccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhh
Confidence 0000000000000000000000000000000000 0000000000 00 000000001111
Q ss_pred ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 238 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..........+++|+++|+|++|.+++++..+.+.+.++ +.++++++ +||+++.++|+++.+.|.+|+.+..
T Consensus 222 ~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 222 RSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVP--RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhccCccCCccCceEEEEeCCCcccCHHHhccccccCC--cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 111112355689999999999999999999988888887 77888886 6999999999999999999998754
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=5.7e-27 Score=191.62 Aligned_cols=265 Identities=14% Similarity=0.116 Sum_probs=169.1
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------------ccHHHHH---HHhhcc-ceE
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------------VTWQFQV---GALTKK-YSV 93 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------------~~~~~~~---~~l~~~-~~v 93 (320)
+..+|+|..+|.... ...++||++|++++++. ..|..++ ..|... |-|
T Consensus 39 ~~~~~~Y~t~G~ln~----------------~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfv 102 (389)
T PRK06765 39 PDVQMGYETYGTLNR----------------AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFV 102 (389)
T ss_pred CCceEEEEeccccCC----------------CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEE
Confidence 356788988886322 25689999999988642 1366665 346555 999
Q ss_pred EecCCCCCCCCCCC---------------------CCCCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhC
Q 020916 94 YIPDLLFFGGSITD---------------------EADRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 94 i~~d~~G~G~s~~~---------------------~~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~ 151 (320)
|++|..|-|.|..| .+.+++.++++++.+++++++++++. ++||||||++++.+|.++
T Consensus 103 i~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 103 ISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred EEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 99999987653211 12368999999999999999999986 999999999999999999
Q ss_pred ccccccEEEecccccccccccccccc----cc-ccccccccc-----Cc-CcHHHHHHHH----------hHhhhccc--
Q 020916 152 PNLVQAMVVSGSILAMTDSINETNLN----RL-GVSSSSELL-----LP-NSVKGLKALL----------SVATYKKL-- 208 (320)
Q Consensus 152 p~~v~~lvl~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~-----~~-~~~~~~~~~~----------~~~~~~~~-- 208 (320)
|++|+++|++++.............. .+ ....+.... .+ ......+... .....+..
T Consensus 183 P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~ 262 (389)
T PRK06765 183 PHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASI 262 (389)
T ss_pred hHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccc
Confidence 99999999998876543321000000 00 000000000 00 0011111111 10000000
Q ss_pred c-------CCchhHHHHHHHHh------cChhhHHHHhhhhhccC-------CCCCCCCCCCcEEEEecCCCCCCCHHHH
Q 020916 209 W-------FPSCLYKDFLEVMF------ANRKERAELLEGLLISN-------KDPTVPNFPQRVHLLWGEDDQIFNVELA 268 (320)
Q Consensus 209 ~-------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 268 (320)
. ......+.++.... .+......+...+...+ ....+.++++|+|+|+|++|.++|++..
T Consensus 263 ~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~ 342 (389)
T PRK06765 263 EVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYN 342 (389)
T ss_pred cccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0 00012223333221 11122222223332222 2245668999999999999999999999
Q ss_pred HHHHHHhCC--CCeEEEEecC-CCcccccCChHHHHHHHHHHHHh
Q 020916 269 HNMKEQLGA--DHVTFQGIKK-AGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+.+.+.++. .+++++++++ +||+.++++|+++++.|.+||++
T Consensus 343 ~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 343 YKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999998861 2689999985 89999999999999999999975
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=3.7e-26 Score=174.92 Aligned_cols=240 Identities=21% Similarity=0.259 Sum_probs=166.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----CCcEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG----VDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~l 134 (320)
...|+++++||+.++.. .|+.+...|+.. ..|+++|.|.||.|+... ..+...+++|+..+|+..+ ..++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 47899999999999999 999999999988 899999999999998544 4568899999999999884 568999
Q ss_pred EEeChhH-HHHHHHHHhCccccccEEEeccccccccccccccccccc---ccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 135 VGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG---VSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 135 vGhS~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+|||||| .+++..+...|+.+..+|+++-.+...+.........+. .........+........+.. ..
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~-------~~ 200 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE-------VG 200 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH-------Hh
Confidence 9999999 777777888999999999998776422221111111110 000000000111111111111 01
Q ss_pred CchhHHHHHHHHhc------------ChhhHHHHhhhhhccCCCCCC--CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC
Q 020916 211 PSCLYKDFLEVMFA------------NRKERAELLEGLLISNKDPTV--PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG 276 (320)
Q Consensus 211 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 276 (320)
.+.....++...+. +......++..+........+ .....||+++.|.++..++.+....+.+.++
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp 280 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP 280 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc
Confidence 11222222222221 122223333332111222222 6678999999999999999999999999999
Q ss_pred CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 277 ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++++.++++||+.+.|+|+++.+.|.+|+...
T Consensus 281 --~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 281 --NVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred --chheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 899999999999999999999999999998764
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=99.95 E-value=3.2e-26 Score=177.41 Aligned_cols=244 Identities=13% Similarity=0.172 Sum_probs=155.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
.+.+.++||.+|+.|...+.... ..+.++||++||++.... .+..+++.|.+. |.|+.+|.+|+
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~--------------~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENS--------------PKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccC--------------CCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCC
Confidence 35678889999999988763211 135689999999999877 799999999998 99999999988
Q ss_pred -CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 102 -GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 102 -G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
|.|+......+......|+.++++.+ +..++.|+||||||.+|+..|... .++++|+.+|..............
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc
Confidence 99976554555555567777666665 456899999999999997777643 388899888876433111100000
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchh-HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL-YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
... .+.....+.... +. .... ...++........ . . .......+..+++|+|+||
T Consensus 154 ~~~--~~p~~~lp~~~d----------~~----g~~l~~~~f~~~~~~~~~-----~-~--~~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 154 DYL--SLPIDELPEDLD----------FE----GHNLGSEVFVTDCFKHGW-----D-T--LDSTINKMKGLDIPFIAFT 209 (307)
T ss_pred ccc--cCcccccccccc----------cc----cccccHHHHHHHHHhcCc-----c-c--cccHHHHHhhcCCCEEEEE
Confidence 000 000000000000 00 0000 0111111100000 0 0 0001123556789999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
|++|.++|.+.++.+.+.+...++++++++|++|.+.. ++- .+++|.+.+.
T Consensus 210 G~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~----~~~~~~~~~~ 260 (307)
T PRK13604 210 ANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLV----VLRNFYQSVT 260 (307)
T ss_pred cCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc-chH----HHHHHHHHHH
Confidence 99999999999999999886568999999999998763 232 3445555443
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=2.1e-25 Score=184.84 Aligned_cols=240 Identities=11% Similarity=0.076 Sum_probs=152.5
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
+...+..+||.+|..+...+.. .++.|+||++||+++.....|..+++.|.+. |+|+++|+||
T Consensus 169 e~v~i~~~~g~~l~g~l~~P~~----------------~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG 232 (414)
T PRK05077 169 KELEFPIPGGGPITGFLHLPKG----------------DGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPS 232 (414)
T ss_pred EEEEEEcCCCcEEEEEEEECCC----------------CCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCC
Confidence 3344444567688877655421 1356777777777765432788888889887 9999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 101 FGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 101 ~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
+|.|.......+......++.+.+... +.+++.++|||+||.+++.+|..+|++|+++|+++++........ ....
T Consensus 233 ~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-~~~~ 311 (414)
T PRK05077 233 VGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-KRQQ 311 (414)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch-hhhh
Confidence 999975432233333444555555544 457899999999999999999999999999999988753110000 0000
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
.........+.... . ........+... +..+..........++++|+|+|+|
T Consensus 312 -------------~~p~~~~~~la~~l-g---~~~~~~~~l~~~-----------l~~~sl~~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 312 -------------QVPEMYLDVLASRL-G---MHDASDEALRVE-----------LNRYSLKVQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred -------------hchHHHHHHHHHHh-C---CCCCChHHHHHH-----------hhhccchhhhhhccCCCCcEEEEec
Confidence 00000011111000 0 000000111110 0000000000012568999999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++|+++|.+..+.+.+..+ +.++++++++ ++.+.++++.+.|.+||++.
T Consensus 364 ~~D~ivP~~~a~~l~~~~~--~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSRLIASSSA--DGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHHHHHHhCC--CCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999999999988887 8999999985 45679999999999999864
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=7.5e-26 Score=183.34 Aligned_cols=267 Identities=14% Similarity=0.102 Sum_probs=154.1
Q ss_pred CCceEEEcCCCceeeEe-ccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFW-VPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d 97 (320)
.+.+.++++||..+.+. ...+. ..+.+|+||++||++++... .+..+++.|.+. |+|+++|
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~----------------~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d 94 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPA----------------QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMH 94 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCc----------------cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEe
Confidence 45566888899887653 32221 11357899999999887541 345688888887 9999999
Q ss_pred CCCCCCCCCCCCC-CChhHHHHHHHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhCccc--cccEEEeccccccccc
Q 020916 98 LLFFGGSITDEAD-RSPTFQAQCLATGL----AKLGVDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDS 170 (320)
Q Consensus 98 ~~G~G~s~~~~~~-~~~~~~~~~l~~~l----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~ 170 (320)
+||||.+...... +.. ...+|+..++ +.++..+++++||||||.+++.++.++++. +.++|+++++......
T Consensus 95 ~rG~g~~~~~~~~~~~~-~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~ 173 (324)
T PRK10985 95 FRGCSGEPNRLHRIYHS-GETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC 173 (324)
T ss_pred CCCCCCCccCCcceECC-CchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH
Confidence 9999987543221 111 1234444433 345667899999999999988888876543 8899999887643211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhh-hccc--cCCch------hHHHHHHHHhcChhhHHHHhhhhhccCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVAT-YKKL--WFPSC------LYKDFLEVMFANRKERAELLEGLLISNK 241 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (320)
.. .+... ......... ...+........ .... ....+ ...++-+...............+.....
T Consensus 174 ~~--~~~~~-~~~~~~~~l---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~ 247 (324)
T PRK10985 174 SY--RMEQG-FSRVYQRYL---LNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA 247 (324)
T ss_pred HH--HHhhh-HHHHHHHHH---HHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh
Confidence 10 00000 000000000 000110000000 0000 00000 0111111111111011111111111223
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh-----HHHHHHHHHHHHhhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP-----CAYNRCLKQFLASLH 312 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 312 (320)
...+.++++|+++|+|++|++++++....+.+..+ +.++++++++||+.+++.. ....+.+.+|++...
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 35668899999999999999999888877776666 8899999999999998742 467778888886543
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=2.3e-25 Score=180.43 Aligned_cols=253 Identities=12% Similarity=0.166 Sum_probs=154.9
Q ss_pred cCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-------------------------HH
Q 020916 28 IEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-------------------------QF 82 (320)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-------------------------~~ 82 (320)
..||.+|+++.+.+ +..+.+||++||++++....| ..
T Consensus 4 ~~~g~~l~~~~~~~------------------~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 4 NKDGLLLKTYSWIV------------------KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred CCCCCeEEEeeeec------------------cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 34788887766553 135679999999998875111 46
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCC--C--CChhHHHHHHHHHHHHhC------------------------CCcEE
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEA--D--RSPTFQAQCLATGLAKLG------------------------VDKCV 133 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~--~--~~~~~~~~~l~~~l~~~~------------------------~~~~~ 133 (320)
+++.|.+. |.|+++|+||||.|..... . .+++++++|+.++++.+. ..|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 78999887 9999999999999985421 1 478888999999987642 24799
Q ss_pred EEEeChhHHHHHHHHHhCcc--------ccccEEEecccccccccccc--cccccccccccccccCcCcHHHHHHHHhHh
Q 020916 134 LVGFSYGGMVSFKVAELYPN--------LVQAMVVSGSILAMTDSINE--TNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
|+||||||.+++.++..+++ .++++|+++|.......... ........ .....+..+....
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~---------~l~~~~~~~~p~~ 216 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYL---------PVMNFMSRVFPTF 216 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHH---------HHHHHHHHHCCcc
Confidence 99999999999999876542 58899988887532110000 00000000 0000000000000
Q ss_pred hhcc-ccCC--chhHHHHHHHHhc-----ChhhHHHHhhhhhccCCCCCCCCC--CCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 204 TYKK-LWFP--SCLYKDFLEVMFA-----NRKERAELLEGLLISNKDPTVPNF--PQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 204 ~~~~-~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
.... .+.. +...+.+....+. .......++..... ....+..+ ++|+|+++|++|.+++++.++.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~ 294 (332)
T TIGR01607 217 RISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYN 294 (332)
T ss_pred cccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHH
Confidence 0000 0000 0111111111100 00111111111110 01123334 7899999999999999999999888
Q ss_pred HhCCCCeEEEEecCCCcccccCC-hHHHHHHHHHHHH
Q 020916 274 QLGADHVTFQGIKKAGHLVHLER-PCAYNRCLKQFLA 309 (320)
Q Consensus 274 ~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~ 309 (320)
.+...+++++++++++|.++.|. ++++.+.|.+||+
T Consensus 295 ~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 295 KLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred hccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 76534789999999999999874 7899999999986
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=8.9e-25 Score=172.71 Aligned_cols=228 Identities=12% Similarity=0.073 Sum_probs=135.9
Q ss_pred CCCeEEEEcCCCC----CccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-----CCCc
Q 020916 62 SKPVVVLVHGFAA----EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-----GVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~----~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-----~~~~ 131 (320)
.++.||++||++. +.. .|..+++.|++. |+|+++|+||||.|.... .+.+.+.+|+.++++.+ +.++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4567888888653 233 466778999887 999999999999987432 45667778888888776 4567
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCC
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP 211 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (320)
++++|||+||.+++.++.. +++|+++|++++.................. ..... ...+.... ...+-.
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~-~g~~~~ 169 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYL----GQLLS------ADFWRKLL-SGEVNL 169 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHH----HHHhC------hHHHHHhc-CCCccH
Confidence 9999999999999999865 468999999997643211111000000000 00000 00000000 001100
Q ss_pred chhHHHHHHHHh-----cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH------HHHHHHhCCCCe
Q 020916 212 SCLYKDFLEVMF-----ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA------HNMKEQLGADHV 280 (320)
Q Consensus 212 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~~~~~~~~~ 280 (320)
......+..... ........+. ......+..+++|+++++|+.|...+ ... ..+.+.+...++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 170 GSSLRGLGDALLKARQKGDEVAHGGLA-----ERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred HHHHHHHHHHHHhhhhcCCCcccchHH-----HHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe
Confidence 011111111000 0000000000 01112345678999999999998863 222 445555522389
Q ss_pred EEEEecCCCcccccC-ChHHHHHHHHHHHHh
Q 020916 281 TFQGIKKAGHLVHLE-RPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 310 (320)
+++.+++++|++..+ .++++.+.|.+||++
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999999998655 559999999999963
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.92 E-value=1.6e-23 Score=155.45 Aligned_cols=181 Identities=18% Similarity=0.174 Sum_probs=126.0
Q ss_pred CeEEEEcCCCCCccccHHH--HHHHhhc---cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 64 PVVVLVHGFAAEGIVTWQF--QVGALTK---KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~--~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
|+||++||++++.. .|.. +.+.+.+ .++|+++|+|||+ ++.++++.++++.++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999999 8874 4466654 4999999999985 3578899999999998999999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCC--chhHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP--SCLYK 216 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 216 (320)
+||.+++.+|.++|. .+|+++|+...... .. ...... .. .... -....
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~-----~~--------------------~~~~~~-~~-~~~~~~~~~~~ 119 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFEL-----LT--------------------DYLGEN-EN-PYTGQQYVLES 119 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHHH-----HH--------------------HhcCCc-cc-ccCCCcEEEcH
Confidence 999999999999983 46888876531100 00 000000 00 0000 00001
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.+ +..+...+.. .+. ..+|+++++|++|.++|++.+..+.+. ++.++++|++|.+ ..
T Consensus 120 ~~--------------~~d~~~~~~~-~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f--~~ 176 (190)
T PRK11071 120 RH--------------IYDLKVMQID-PLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAF--VG 176 (190)
T ss_pred HH--------------HHHHHhcCCc-cCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcch--hh
Confidence 11 1111111212 233 677899999999999999999998884 4567889999987 44
Q ss_pred hHHHHHHHHHHHH
Q 020916 297 PCAYNRCLKQFLA 309 (320)
Q Consensus 297 ~~~~~~~i~~fl~ 309 (320)
.+++.+.|.+|+.
T Consensus 177 ~~~~~~~i~~fl~ 189 (190)
T PRK11071 177 FERYFNQIVDFLG 189 (190)
T ss_pred HHHhHHHHHHHhc
Confidence 5888999999875
No 54
>PRK10566 esterase; Provisional
Probab=99.92 E-value=9.2e-23 Score=160.06 Aligned_cols=204 Identities=18% Similarity=0.219 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCCh-------hHHHHHHHHHHHHh-----
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSP-------TFQAQCLATGLAKL----- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~-------~~~~~~l~~~l~~~----- 127 (320)
+..|+||++||++++.. .|..++..|.+. |+|+++|+||||.+......... ....+++.++++.+
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35789999999999988 899999999887 99999999999986432211111 12234444444432
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK 206 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
+.++++++|||+||.+++.++.++|+....++++++..... +.... ..
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~----~~ 152 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS---------------------------LARTL----FP 152 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH---------------------------HHHHh----cc
Confidence 34689999999999999999998886433444443321100 00000 00
Q ss_pred cccCC-chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCC----Ce
Q 020916 207 KLWFP-SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGAD----HV 280 (320)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~ 280 (320)
..... ...... .......+...+....+.++ ++|+|+++|++|.++|++..+.+.+.+... ++
T Consensus 153 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~ 221 (249)
T PRK10566 153 PLIPETAAQQAE-----------FNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNL 221 (249)
T ss_pred cccccccccHHH-----------HHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcce
Confidence 00000 000000 00001111111112234455 689999999999999999999999888621 36
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++.++++||.+. + ...+.+.+||++.
T Consensus 222 ~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 222 TCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred EEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 7888999999863 3 4567888888753
No 55
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=5.5e-23 Score=168.23 Aligned_cols=284 Identities=19% Similarity=0.171 Sum_probs=168.0
Q ss_pred HHHHhcC--CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH------HHHH
Q 020916 14 GLMKMAG--VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ------FQVG 85 (320)
Q Consensus 14 ~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~------~~~~ 85 (320)
++.+..| .+.+.|+++||..|......+..... ....+|+||++||+++++. .|. .++.
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~------------~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~ 101 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRL------------GSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGF 101 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCC------------CCCCCCeEEEeCccccccc-ceeecCcccchHH
Confidence 3444444 67888999999999986653211100 1135789999999998887 763 3555
Q ss_pred Hhhcc-ceEEecCCCCCCCCCC-------CC--CCCChhHHH-HHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 86 ALTKK-YSVYIPDLLFFGGSIT-------DE--ADRSPTFQA-QCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 86 ~l~~~-~~vi~~d~~G~G~s~~-------~~--~~~~~~~~~-~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.|++. |+|+++|+||++.|.. .. .++++++++ .|+.++++++ ..++++++|||+||.+++.++ .+
T Consensus 102 ~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~ 180 (395)
T PLN02872 102 ILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQ 180 (395)
T ss_pred HHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hC
Confidence 67776 9999999999876532 11 136777777 7999999986 347899999999999998555 56
Q ss_pred cc---ccccEEEecccccccccccccc--ccccccc----cc-ccccCcCcHHHHHHHHhH--------------hhhcc
Q 020916 152 PN---LVQAMVVSGSILAMTDSINETN--LNRLGVS----SS-SELLLPNSVKGLKALLSV--------------ATYKK 207 (320)
Q Consensus 152 p~---~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~----~~-~~~~~~~~~~~~~~~~~~--------------~~~~~ 207 (320)
|+ +|+.+++++|............ +...... .+ ...+.+.. ..+..+... .....
T Consensus 181 p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~C~~~~~c~~~~~~~~g~~ 259 (395)
T PLN02872 181 PNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS-DVLVKLLDSICEGHMDCNDLLTSITGTN 259 (395)
T ss_pred hHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc-HHHHHHHHHHccCchhHHHHHHHHhCCC
Confidence 76 6888888888764322111100 0000000 00 00001110 001111100 00000
Q ss_pred ccCCchhHHHHHHHHh--cChhhHHHHh----------------hhhhc----cCCCCCCCCC--CCcEEEEecCCCCCC
Q 020916 208 LWFPSCLYKDFLEVMF--ANRKERAELL----------------EGLLI----SNKDPTVPNF--PQRVHLLWGEDDQIF 263 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~--~~~~~~~~~~----------------~~~~~----~~~~~~~~~~--~~P~l~i~g~~D~~~ 263 (320)
..+.......++.... ...+....+. ..+.. ....-.+.++ ++|+++++|++|.++
T Consensus 260 ~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv 339 (395)
T PLN02872 260 CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLA 339 (395)
T ss_pred cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCC
Confidence 0011111111111100 0000000000 01100 1112345666 579999999999999
Q ss_pred CHHHHHHHHHHhCCCCeEEEEecCCCccc---ccCChHHHHHHHHHHHHhhhh
Q 020916 264 NVELAHNMKEQLGADHVTFQGIKKAGHLV---HLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++..+.+.+.++ ...+++.+++++|.. ..+.|+++.+.|.+|+++...
T Consensus 340 ~~~dv~~l~~~Lp-~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 340 DVTDVEHTLAELP-SKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CHHHHHHHHHHCC-CccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 9999999999998 236888999999963 458899999999999987554
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=1.1e-24 Score=169.11 Aligned_cols=209 Identities=23% Similarity=0.286 Sum_probs=131.4
Q ss_pred ceEEecCCCCCCCCCC---C-CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc-
Q 020916 91 YSVYIPDLLFFGGSIT---D-EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL- 165 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~---~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~- 165 (320)
|+|+++|+||+|.|++ . ...++.+++++++..+++.++.++++++||||||.+++.+|..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 2 3568899999999999999999999999999999999999999999999999999862
Q ss_pred ---ccccccccc-ccccccccccccccCcCcHHHHHHHHhHhh-----hccccCCchhHHHHHHHHhcC--hhhHHH---
Q 020916 166 ---AMTDSINET-NLNRLGVSSSSELLLPNSVKGLKALLSVAT-----YKKLWFPSCLYKDFLEVMFAN--RKERAE--- 231 (320)
Q Consensus 166 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 231 (320)
......... ...... .................... ..................... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQL----LDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFW 156 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhH----HHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcc
Confidence 000000000 000000 00000000000000000000 000000000000000000000 000000
Q ss_pred -HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHH
Q 020916 232 -LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLK 305 (320)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 305 (320)
........+....+..+++|+++++|++|.++|++....+.+.++ +.++++++++||+.+++.|+++.+.|.
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP--NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST--TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC--CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 011111112223456699999999999999999999999999998 899999999999999999999998875
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=1.2e-22 Score=166.57 Aligned_cols=241 Identities=12% Similarity=0.194 Sum_probs=144.5
Q ss_pred CCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH-HHHH----HHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ-CLAT----GLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~l~~----~l~~~~~~ 130 (320)
.+++||++||+..+.. .+ +.+++.|.+. |+|+++|++|+|.+.. ..++++++. ++.+ +.+..+.+
T Consensus 61 ~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 61 HKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4568999999865554 44 5789999887 9999999999998753 335555543 2444 44455678
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc--cccccccccccccc--cCcCcH-H-----------
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE--TNLNRLGVSSSSEL--LLPNSV-K----------- 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~----------- 194 (320)
+++++||||||.+++.++..+|++|+++|+++++......... .............. ..+... .
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSL 216 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchh
Confidence 9999999999999999999999999999999988764322110 00000000000000 000000 0
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHH--HHhcC-----hhhHHHHhhhhhc-----------cCCCCCCCCCCCcEEEEe
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLE--VMFAN-----RKERAELLEGLLI-----------SNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~-----------~~~~~~~~~~~~P~l~i~ 256 (320)
.......... ....++....+.+ .+..+ ......++..+.. ......+.++++|+++++
T Consensus 217 ~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~ 293 (350)
T TIGR01836 217 GYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIY 293 (350)
T ss_pred hhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEe
Confidence 0000000000 0001111112111 00000 0111111111111 011234678899999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC---hHHHHHHHHHHHHh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER---PCAYNRCLKQFLAS 310 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 310 (320)
|++|.++|++..+.+.+.+++.+.++++++ +||..++.. ++++...|.+||.+
T Consensus 294 G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 294 AERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999998874457778887 699887653 47899999999875
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.90 E-value=4.3e-23 Score=152.75 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=142.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh---CCCcEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKL---GVDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~---~~~~~~l 134 (320)
..+|.++++||++.+.- .|..++..|... .+|+++|+||||++...+ .+.+.+.+++|+.++++.+ ...+++|
T Consensus 72 t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 58999999999999999 999999999887 888999999999998766 4589999999999999987 2457999
Q ss_pred EEeChhHHHHHHHHHh--CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh----hcc-
Q 020916 135 VGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT----YKK- 207 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 207 (320)
|||||||.+|.+.|.. -|. +.|+++++-.-...- ..+......-...+..++.+...+.... .+.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAm-------eAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~ 222 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAM-------EALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNR 222 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEechHHH-------HHHHHHHHHHhcCCccccchhhHHHHHhcccccccc
Confidence 9999999999888754 355 889988875421100 0000000000001111111111111100 000
Q ss_pred ----ccCCchhHHHHH-HHHh--cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe
Q 020916 208 ----LWFPSCLYKDFL-EVMF--ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280 (320)
Q Consensus 208 ----~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 280 (320)
..++..+...-- ..+. .+......++..+... ....+-...+|-++|.+..|..-. +. .. -+.. ...
T Consensus 223 ~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~g-LS~~Fl~~p~~klLilAg~d~LDk-dL--ti-GQMQ-Gk~ 296 (343)
T KOG2564|consen 223 DSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKG-LSDKFLGLPVPKLLILAGVDRLDK-DL--TI-GQMQ-GKF 296 (343)
T ss_pred ccceEecchheeeccCCCcEEEEeeccccchhHHHHHhh-hhhHhhCCCccceeEEecccccCc-ce--ee-eeec-cce
Confidence 000100000000 0000 0000011111111111 112334456777777777776521 11 01 1122 477
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++.+++.+||+.+.+.|..++..+..|+.+..
T Consensus 297 Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 297 QLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 89999999999999999999999999998754
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=9.5e-22 Score=165.31 Aligned_cols=231 Identities=15% Similarity=0.090 Sum_probs=142.4
Q ss_pred CCCeEEEEcCCCCCccccHH-----HHHHHhhcc-ceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ-----FQVGALTKK-YSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~-----~~~~~l~~~-~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
.+++||++||+..... .|+ .+++.|.+. |+|+++|++|+|.+.... .++..+.+.+.+..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 5789999999987777 774 688999887 999999999999886432 2233344556677777777889999
Q ss_pred EEEeChhHHHHH----HHHHhC-ccccccEEEeccccccccccccccccc-ccc-----cccccccCcCc-----HH---
Q 020916 134 LVGFSYGGMVSF----KVAELY-PNLVQAMVVSGSILAMTDSINETNLNR-LGV-----SSSSELLLPNS-----VK--- 194 (320)
Q Consensus 134 lvGhS~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~-----~~--- 194 (320)
++|||+||.++. .++... +++|++++++++...+........+.. ... ........+.. +.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999862 245555 778999999999876543221111000 000 00000000000 00
Q ss_pred ----HHHHHHhHhhhcc--------------ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 195 ----GLKALLSVATYKK--------------LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 195 ----~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
.+...+....... ..++.....++++.++...... -..+...+....+..+++|+++|.
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~---~G~~~v~g~~~dL~~I~vPvLvV~ 422 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT---TGGLEVCGVRLDLSKVKVPVYIIA 422 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc---CCeeEECCEecchhhCCCCEEEEe
Confidence 0000111010000 1111222222222222111100 011111233367888999999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 298 (320)
|++|.++|.+.+..+.+.++ +.+..+++++||..++++|.
T Consensus 423 G~~D~IvP~~sa~~l~~~i~--~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 423 TREDHIAPWQSAYRGAALLG--GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred eCCCCcCCHHHHHHHHHHCC--CCEEEEECCCCCchHhhCCC
Confidence 99999999999999999988 77888999999999887663
No 60
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=2.8e-21 Score=142.01 Aligned_cols=227 Identities=16% Similarity=0.119 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH-HhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA-KLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~lvGhS~ 139 (320)
..+..++|+|-.|+++. .|+.+...|.....++++++||+|..-......+++.+++.+...+. -...+++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 46788999999999999 99999999998899999999999998777777899999999988887 34457899999999
Q ss_pred hHHHHHHHHHhCcc---ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 140 GGMVSFKVAELYPN---LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
||++|.++|.+... .+..+.+.++..+.... .... ........+..+..........+.+..+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i-----------~~~~D~~~l~~l~~lgG~p~e~led~El~ 150 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQI-----------HHLDDADFLADLVDLGGTPPELLEDPELM 150 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCc-----------cCCCHHHHHHHHHHhCCCChHHhcCHHHH
Confidence 99999999987532 25666666554431110 0000 00011111122222111111111221111
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.+....++. .....+. +.. ..-..++||+.++.|++|..+..+....|.++.. ...++++++| ||+...++
T Consensus 151 ~l~LPilRA---D~~~~e~---Y~~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG-gHFfl~~~ 221 (244)
T COG3208 151 ALFLPILRA---DFRALES---YRY-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG-GHFFLNQQ 221 (244)
T ss_pred HHHHHHHHH---HHHHhcc---ccc-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC-cceehhhh
Confidence 111111111 1111111 111 1236789999999999999999999999999887 6889999997 99999999
Q ss_pred hHHHHHHHHHHHHh
Q 020916 297 PCAYNRCLKQFLAS 310 (320)
Q Consensus 297 ~~~~~~~i~~fl~~ 310 (320)
.+++.+.|.+.+..
T Consensus 222 ~~~v~~~i~~~l~~ 235 (244)
T COG3208 222 REEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998864
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=2.4e-21 Score=143.31 Aligned_cols=193 Identities=19% Similarity=0.198 Sum_probs=138.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
..++++++||...+.. ....+...|... ++|+.+|++|+|.|.........-+.++.+-+.++.-. .++++|+|+
T Consensus 59 ~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred cceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 3589999999976665 444555566663 99999999999999987755444333444444444332 578999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
|+|+..++.+|.+.| +.++||.+|........... .....+++.
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~-----------------------------~~~~~~~d~----- 181 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD-----------------------------TKTTYCFDA----- 181 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhhhhhhccC-----------------------------cceEEeecc-----
Confidence 999999999999998 99999999875321110000 000000000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
....+.+..++||+|++||++|.+++.....++.+..+ ...+..++.|+||.-..- .
T Consensus 182 ---------------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k-~~~epl~v~g~gH~~~~~-~ 238 (258)
T KOG1552|consen 182 ---------------------FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCK-EKVEPLWVKGAGHNDIEL-Y 238 (258)
T ss_pred ---------------------ccccCcceeccCCEEEEecccCceecccccHHHHHhcc-ccCCCcEEecCCCccccc-C
Confidence 00134678899999999999999999999999999988 456888889999986654 4
Q ss_pred HHHHHHHHHHHHhhhhc
Q 020916 298 CAYNRCLKQFLASLHAD 314 (320)
Q Consensus 298 ~~~~~~i~~fl~~~~~~ 314 (320)
.++.+.+..|+.....+
T Consensus 239 ~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 239 PEYIEHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 45888999999877654
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=6.5e-21 Score=175.33 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=152.7
Q ss_pred CCCeEEEEcCCCCCccccHHHH-----HHHhhcc-ceEEecCCCCCCCCCCCCC--CCChhHHHHHHHHHHHH---hCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ-----VGALTKK-YSVYIPDLLFFGGSITDEA--DRSPTFQAQCLATGLAK---LGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~-----~~~l~~~-~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~---~~~~ 130 (320)
.+++|||+||++.+.. .|+.. ++.|.+. |+|+++|+ |.++.+.. ..++.+++..+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 6789999999999998 99865 7889777 99999994 66655432 24666666666666654 3346
Q ss_pred cEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccccccc-------ccccc-cccccCcCc---------
Q 020916 131 KCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNR-------LGVSS-SSELLLPNS--------- 192 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~--------- 192 (320)
+++++||||||.+++.++..+ +++|+++|+++++..+........... +.... ......+..
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999998755 558999999988865432211000000 00000 000000000
Q ss_pred -----HHHHHHHHhHhhhccccCCchhHHHHHHHH-h--cChhhHHHHhhhhhcc-----------CCCCCCCCCCCcEE
Q 020916 193 -----VKGLKALLSVATYKKLWFPSCLYKDFLEVM-F--ANRKERAELLEGLLIS-----------NKDPTVPNFPQRVH 253 (320)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~P~l 253 (320)
......++..........+++....+.... + ........+...+... .....+.++++|+|
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred ChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 000111111111111112222223332222 0 0111122222222211 11135789999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEE-EEecCCCccccc---CChHHHHHHHHHHHHhhhhc
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTF-QGIKKAGHLVHL---ERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~~~ 314 (320)
+|+|++|.++|++..+.+.+.++ +.++ .+++++||+.++ ..++++...|.+||.+....
T Consensus 302 ~i~G~~D~ivp~~~~~~l~~~i~--~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 302 AFVGEVDDIGQPASVRGIRRAAP--NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCC--CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 99999999999999999999998 7776 677899999775 35788999999999986543
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=1.5e-20 Score=149.22 Aligned_cols=242 Identities=27% Similarity=0.335 Sum_probs=145.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
+|+|+++||++++.. .|......+... |+++++|+||||.|. .. .......++++..+++.++..+++++|||+
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 97 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALGLEKVVLVGHSM 97 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 569999999999988 887743333332 899999999999997 22 334555589999999999988899999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccc--cccccccccccccCcCc-HHHHHHHHhHhh-hc---------
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN--LNRLGVSSSSELLLPNS-VKGLKALLSVAT-YK--------- 206 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~--------- 206 (320)
||.+++.++.++|++++++|++++............ ........... ..... ............ ..
T Consensus 98 Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T COG0596 98 GGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD-LLLGLDAAAFAALLAALGLLAALAAAARAG 176 (282)
T ss_pred cHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh-hhhccchhhhhhhhhcccccccccccchhc
Confidence 999999999999999999999998754111000000 00000000000 00000 000000000000 00
Q ss_pred -cccCCchhHHHHHHHHhcChh-hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEE
Q 020916 207 -KLWFPSCLYKDFLEVMFANRK-ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284 (320)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
..................... ....................+++|+++++|++|.+.+......+.+..+. ..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~ 255 (282)
T COG0596 177 LAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVV 255 (282)
T ss_pred cccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEE
Confidence 000000000000000000000 00000011110122245667889999999999977777666667777761 389999
Q ss_pred ecCCCcccccCChHHHHHHHHHHHH
Q 020916 285 IKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 285 ~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++++||+++.++|+.+.+.+.+|++
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHHh
Confidence 9999999999999999988888544
No 64
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.88 E-value=9.4e-22 Score=140.21 Aligned_cols=222 Identities=16% Similarity=0.184 Sum_probs=156.1
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~ 99 (320)
+.-.+.++|.++|+-|.-.. +.+.|+++++||..++-. ..-..+.-+-.+ .+|+.+++|
T Consensus 55 e~i~l~T~D~vtL~a~~~~~------------------E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYR 115 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLS------------------ESSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYR 115 (300)
T ss_pred eEEEEEcCcceeEeeeeecc------------------cCCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEee
Confidence 34445566888888765543 148899999999999887 666666655444 899999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
|+|.|........+.. |-.++++++ +..++++.|.|+||.+|+.+|+++.+++.++|+-++....+....+
T Consensus 116 GYG~S~GspsE~GL~l---Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~ 192 (300)
T KOG4391|consen 116 GYGKSEGSPSEEGLKL---DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIP 192 (300)
T ss_pred ccccCCCCccccceec---cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhh
Confidence 9999998765433332 334445544 3468999999999999999999999999999998877643322111
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
.. .+- ..+.+....+...| .....+...+.|.|
T Consensus 193 ~v-------------~p~----~~k~i~~lc~kn~~------------------------------~S~~ki~~~~~P~L 225 (300)
T KOG4391|consen 193 LV-------------FPF----PMKYIPLLCYKNKW------------------------------LSYRKIGQCRMPFL 225 (300)
T ss_pred ee-------------ccc----hhhHHHHHHHHhhh------------------------------cchhhhccccCceE
Confidence 00 000 00111111111110 01123446678999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+|.|.+|.++|+-..+.+.+..++...++.++|++.|.-..- -+-..++|.+||.+...
T Consensus 226 FiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 226 FISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred EeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 999999999999999999999987788999999999975443 35678899999987654
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=3.9e-21 Score=137.99 Aligned_cols=142 Identities=25% Similarity=0.314 Sum_probs=112.6
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH--HHhCCCcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL--AKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l--~~~~~~~~~lvGhS~Gg 141 (320)
+||++||++++.. .|..+++.|.+. |.|+.+|+|++|.+... ..++++.+.+ +..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 5899999999998 999999999999 99999999999988321 1222222222 12366899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+++.++.+. .+++++|++++.+. .
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~--~---------------------------------------------------- 97 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD--S---------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG--C----------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCccc--h----------------------------------------------------
Confidence 9999999988 68999999998210 0
Q ss_pred HhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 222 MFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
..+...+.|+++++|++|..++.+..+.+.+.++ .+.++++++|++|+
T Consensus 98 ---------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ---------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ---------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 0123445599999999999999999999999998 67999999999995
No 66
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.86 E-value=2.1e-19 Score=136.69 Aligned_cols=264 Identities=19% Similarity=0.191 Sum_probs=159.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH-----HHhhccceEEecCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV-----GALTKKYSVYIPDL 98 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~-----~~l~~~~~vi~~d~ 98 (320)
+.++++ -..+++.+.|+. ++++|++|-.|-.|.+...+|..+. +.+.+++.++-+|.
T Consensus 2 h~v~t~-~G~v~V~v~G~~-----------------~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~a 63 (283)
T PF03096_consen 2 HDVETP-YGSVHVTVQGDP-----------------KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDA 63 (283)
T ss_dssp EEEEET-TEEEEEEEESS-------------------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-
T ss_pred ceeccC-ceEEEEEEEecC-----------------CCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeC
Confidence 567775 447888888872 2369999999999988873376664 56777799999999
Q ss_pred CCCCCCCCC--CC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 99 LFFGGSITD--EA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 99 ~G~G~s~~~--~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
||+...... .. ..+++++++++..++++++++.++-+|-..||.+..++|..+|++|.|+||+++........ ++
T Consensus 64 PGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~-Ew 142 (283)
T PF03096_consen 64 PGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM-EW 142 (283)
T ss_dssp TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH-HH
T ss_pred CCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH-HH
Confidence 999665433 22 36899999999999999999999999999999999999999999999999999887543321 11
Q ss_pred ccccccccccccccCcCcHHH-H-HHHHhHhhhccccCCchhHHHHHHHHhc--ChhhHHHHhhhhh-ccCCCCCCCCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKG-L-KALLSVATYKKLWFPSCLYKDFLEVMFA--NRKERAELLEGLL-ISNKDPTVPNFP 249 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (320)
...++....+...-....... + ...+...... ...+..+.+.+.+.. +......++..+. +.+.....+...
T Consensus 143 ~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~---~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~ 219 (283)
T PF03096_consen 143 FYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEE---NNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLG 219 (283)
T ss_dssp HHHHHH-------CTTS-HHHHHHHHHS-HHHHH---CT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCC
T ss_pred HHHHHhcccccccccccchHHhhhhccccccccc---ccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCC
Confidence 111111111111111111111 0 1111111111 123445555554432 2234444444442 334445667778
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
||+|++.|+..+. .+.+..+..++...+.++..++++|=.+..|+|+.+++.++-|++..
T Consensus 220 c~vLlvvG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 220 CPVLLVVGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-EEEEEETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCcc--hhhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9999999999887 56778888888767889999999999999999999999999999875
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1e-19 Score=141.78 Aligned_cols=263 Identities=17% Similarity=0.165 Sum_probs=173.4
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--c--------cHHHHH---HHhhcc-ceEEe
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--V--------TWQFQV---GALTKK-YSVYI 95 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~--------~~~~~~---~~l~~~-~~vi~ 95 (320)
++.+|.|..+|.... .....||++|++.+++. . .|..++ +.+... |-||+
T Consensus 34 ~~~~vay~T~Gtln~----------------~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc 97 (368)
T COG2021 34 SDARVAYETYGTLNA----------------EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVIC 97 (368)
T ss_pred cCcEEEEEecccccc----------------cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEE
Confidence 567788988886422 25678999999998654 1 455554 235555 99999
Q ss_pred cCCCCCC-CCCCCC-------------CCCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCccccccEEE
Q 020916 96 PDLLFFG-GSITDE-------------ADRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 96 ~d~~G~G-~s~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
+|..|.+ .|+.|. +..++.++++.-..++++++++++. +||-||||+.|+.++..+|++|.++|.
T Consensus 98 ~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ 177 (368)
T COG2021 98 TNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIP 177 (368)
T ss_pred ecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhhe
Confidence 9999865 444332 2256778888888899999999976 889999999999999999999999999
Q ss_pred eccccccccccccc-cccc---cccccc-----ccccCcCcHHHHHHHHhHhhhccc--------------cC----Cch
Q 020916 161 SGSILAMTDSINET-NLNR---LGVSSS-----SELLLPNSVKGLKALLSVATYKKL--------------WF----PSC 213 (320)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~----~~~ 213 (320)
+++........... ...+ ...+.+ .....+...-.+.+.+....+... .. ...
T Consensus 178 ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f 257 (368)
T COG2021 178 IATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRF 257 (368)
T ss_pred ecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhH
Confidence 98876543322110 0000 000111 011112222222333322222210 00 012
Q ss_pred hHHHHHHHHh------cChhhHHHHhhhhhccCCCCC-------CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe
Q 020916 214 LYKDFLEVMF------ANRKERAELLEGLLISNKDPT-------VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280 (320)
Q Consensus 214 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 280 (320)
..+.|++... .+......+...+...+.... +.++++|++++.-+.|...|++..+.+.+.++ ..
T Consensus 258 ~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~--~~ 335 (368)
T COG2021 258 AVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALP--AA 335 (368)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhcc--cc
Confidence 3334443322 233344445556655666544 78899999999999999999999999999998 33
Q ss_pred E-EEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 281 T-FQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~-~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
. +++++ ..||..++...+.+...|.+||+.
T Consensus 336 ~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 336 GALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 3 76665 779999998888899999999975
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=6.3e-20 Score=140.51 Aligned_cols=268 Identities=18% Similarity=0.199 Sum_probs=153.9
Q ss_pred CCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d 97 (320)
...+.+.++||..+.. |...+ .+..+|.||++||+.+++...| +.+++.+.++ |.|++++
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p-----------------~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~ 111 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDP-----------------RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFH 111 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCc-----------------cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEe
Confidence 3556788887665444 55433 1246789999999987766334 4567888887 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 171 (320)
.|||+.+........-.-..+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+......
T Consensus 112 ~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~- 190 (345)
T COG0429 112 FRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEAC- 190 (345)
T ss_pred cccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHH-
Confidence 999999876443322222336666666555 45789999999999555555544332 35666666655433110
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhc-cccCCchhHHHHHHHHh----------cChhhHHHHhhhhhccC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLWFPSCLYKDFLEVMF----------ANRKERAELLEGLLISN 240 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 240 (320)
...+................+.+........ ....+... ...++.+. ............+....
T Consensus 191 ----~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS 265 (345)
T COG0429 191 ----AYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS 265 (345)
T ss_pred ----HHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcc
Confidence 0000000000000000111111111111100 11112111 11111110 11111112222233344
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC----ChH-HHHHHHHHHHHhhh
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE----RPC-AYNRCLKQFLASLH 312 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 312 (320)
....+++|.+|+|+|++.+|++++++..-......+ +++.+..-+.+||..++. +|. ...+.+.+|++...
T Consensus 266 s~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n-p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 266 SLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN-PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ccccccccccceEEEecCCCCCCChhhCCcchhcCC-CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 457899999999999999999999988777666443 489999999899998876 443 67788888887654
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=1.9e-19 Score=138.34 Aligned_cols=173 Identities=17% Similarity=0.220 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC-----------CCCCC---hhHHHHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD-----------EADRS---PTFQAQCLATGLA 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~-----------~~~~~---~~~~~~~l~~~l~ 125 (320)
+.+++||++||++++.. .|..+++.|.+. ..+..++.+|...+... ..... .....+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 46789999999999999 999999999865 44444445554322110 00011 1122223333333
Q ss_pred ----HhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHH
Q 020916 126 ----KLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKAL 199 (320)
Q Consensus 126 ----~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
..+ .++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-------------------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-------------------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------------
Confidence 333 357999999999999999999998877777766542100
Q ss_pred HhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--C
Q 020916 200 LSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--A 277 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~ 277 (320)
.+ .....+.|+++++|++|+++|.+..+.+.+.+. +
T Consensus 141 ----------~~--------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g 178 (232)
T PRK11460 141 ----------LP--------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLG 178 (232)
T ss_pred ----------cc--------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCC
Confidence 00 001135789999999999999999988888775 2
Q ss_pred CCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 278 DHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 278 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.++++++++++||.+..+..+.+.+.+.+++
T Consensus 179 ~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 179 GDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 3578899999999986544444444444444
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=6.5e-20 Score=141.91 Aligned_cols=105 Identities=20% Similarity=0.202 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCCCCcc---ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH---hCCCcEEE
Q 020916 62 SKPVVVLVHGFAAEGI---VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK---LGVDKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~---~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~l 134 (320)
.+++|||+||++.+.. ..|..+++.|++. |+|+++|+||||.|.......++..+++|+..+++. .+.++++|
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999999986432 1567778899877 999999999999997655556777788887776544 45678999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+||||||.+++.++.++|++++++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999997653
No 71
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.83 E-value=4.6e-18 Score=127.40 Aligned_cols=267 Identities=19% Similarity=0.186 Sum_probs=182.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH-----HHhhccceEEe
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV-----GALTKKYSVYI 95 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~-----~~l~~~~~vi~ 95 (320)
.+++.|++.- ..+++.+.|++ ++++|++|-.|..+.+...+|..+. ..+.++|-|+-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~-----------------~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDP-----------------KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCC-----------------CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEe
Confidence 5788888864 57999999873 3468899999999988873476653 45666799999
Q ss_pred cCCCCCCCCCC--CCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 96 PDLLFFGGSIT--DEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 96 ~d~~G~G~s~~--~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+|.|||-...+ +.. ..++++++++|..++++++.+.++-+|-..|+++..++|..||++|-++||+++.+......
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi 163 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI 163 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH
Confidence 99999955433 222 46899999999999999999999999999999999999999999999999999876543321
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccc--cCCchhHHHHHHHHh--cChhhHHHHhhhhhcc-CCCCCCC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL--WFPSCLYKDFLEVMF--ANRKERAELLEGLLIS-NKDPTVP 246 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 246 (320)
. +...++....+... ..-.....++-...+... .-..++.+.|.+.+. .+......++..+... +.....+
T Consensus 164 e-w~~~K~~s~~l~~~---Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~ 239 (326)
T KOG2931|consen 164 E-WAYNKVSSNLLYYY---GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERP 239 (326)
T ss_pred H-HHHHHHHHHHHHhh---chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCC
Confidence 1 11111100000000 001111222222222221 113345555555544 2223444444444322 2222222
Q ss_pred ----CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 247 ----NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 247 ----~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.++||+|++.|++.+.+ +.+..+..++...+..+..+.++|-.+..++|..+++.+.-|++..
T Consensus 240 ~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 240 KLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 56699999999998874 5667777777656788999999999999999999999999999864
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.83 E-value=9.6e-19 Score=152.83 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=151.6
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d 97 (320)
..+..++...||.++++|...+...++. ++-|+||++||.+.... ..|....+.|+.. |.|+.++
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~-------------k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPR-------------KKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCC-------------CCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 3445555666899999999887544321 12489999999975544 2466677888887 9999999
Q ss_pred CCCCCCCC-----CCC---CCCChhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 98 LLFFGGSI-----TDE---ADRSPTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 98 ~~G~G~s~-----~~~---~~~~~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+||-+.-. ... .....+++.+.+. ++...+ .+++.++|||+||.+++..+...| ++++.+...+...
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 99754321 111 1234444444444 333333 348999999999999999999887 6777776665542
Q ss_pred ccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC
Q 020916 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (320)
........... +... .......... -...+..........
T Consensus 509 ~~~~~~~~~~~------------------~~~~-------------------~~~~~~~~~~---~~~~~~~~sp~~~~~ 548 (620)
T COG1506 509 WLLYFGESTEG------------------LRFD-------------------PEENGGGPPE---DREKYEDRSPIFYAD 548 (620)
T ss_pred hhhhccccchh------------------hcCC-------------------HHHhCCCccc---ChHHHHhcChhhhhc
Confidence 11100000000 0000 0000000000 000011112223567
Q ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhhh
Q 020916 247 NFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 247 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 312 (320)
++++|+|+|||++|..+|.+++..+.+.+. ..+++++++|+.+|.+.. ++...+.+.+.+|+++..
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999888876 457899999999999876 556778888888887754
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=8.1e-19 Score=139.51 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=153.3
Q ss_pred CCCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEec
Q 020916 20 GVQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIP 96 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~ 96 (320)
..+.+.++++||..+.+ |..++.... +.+.+..|.||++||..+++...| +.++..+.+. |+|+++
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~-----------~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVf 160 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRC-----------RTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVF 160 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCccccc-----------CCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEE
Confidence 35677789999999888 554432110 012357799999999987766344 4555555555 999999
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccc--cccEEEeccccccccc
Q 020916 97 DLLFFGGSITDEADRSPTFQAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDS 170 (320)
Q Consensus 97 d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~ 170 (320)
+.||+|.+.-.....-.....+|+.++++++. ..++..+|.||||.+.+.+..+..++ +.+.+.++.+....
T Consensus 161 N~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-- 238 (409)
T KOG1838|consen 161 NHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-- 238 (409)
T ss_pred CCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh--
Confidence 99999998765544333344677777777764 35799999999999999999875442 44444444333211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhh--------ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATY--------KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
.............+...... ..+.+.+..... ..........+++-+.+..........-..+......
T Consensus 239 ~~~~~~~~~~~~~~y~~~l~---~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~ 315 (409)
T KOG1838|consen 239 AASRSIETPLYRRFYNRALT---LNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSS 315 (409)
T ss_pred hhhhHHhcccchHHHHHHHH---HhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchh
Confidence 00000000000000000000 001111100000 0000011222222222221111112222222334445
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHH-HHHHHhCCCCeEEEEecCCCcccccCC----hHH-HHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAH-NMKEQLGADHVTFQGIKKAGHLVHLER----PCA-YNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~-~~~~i~~fl~~~~ 312 (320)
..+.+|++|+|+|++.+|+++|.+..- .....- +++-+++-..+||..++|. +.. +.+.+.+|+....
T Consensus 316 ~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~n--p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 316 NYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSN--PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hhcccccccEEEEecCCCCCCCcccCCHHHHhcC--CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 788999999999999999999986432 223333 3777777788899988875 222 3333677776543
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=1e-17 Score=125.83 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=92.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCC-cEEEEEeC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVD-KCVLVGFS 138 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS 138 (320)
+..+||-+||.+++.. .|+.+.+.|.+. .++|.+++||+|.++.+. ..++-.+...-+.++++.++++ +++.+|||
T Consensus 34 ~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHS 112 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHS 112 (297)
T ss_pred CceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEec
Confidence 3458999999999999 999999999998 999999999999998766 4478888899999999999875 58889999
Q ss_pred hhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
.|+-.|+.++..+| ..++++++|+...+
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCcccc
Confidence 99999999999986 68999999887543
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=7.7e-18 Score=133.54 Aligned_cols=187 Identities=14% Similarity=0.163 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCC-----CCC-------------CCC--------C
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGG-----SIT-------------DEA--------D 110 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~-----s~~-------------~~~--------~ 110 (320)
...|+|+++||++++.. .|.. +.+.+... +.|+.+|..++|. +.. ... .
T Consensus 45 ~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 36799999999998876 6644 33555655 9999999887661 110 000 0
Q ss_pred CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCc
Q 020916 111 RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLP 190 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+..+++...+....+.++.++++|+||||||..|+.++.++|+++++++.+++........ .
T Consensus 124 ~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------~----------- 185 (283)
T PLN02442 124 YVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-------W----------- 185 (283)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc-------h-----------
Confidence 1122223333343444577889999999999999999999999999999988765321000 0
Q ss_pred CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH-HHH
Q 020916 191 NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-LAH 269 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~ 269 (320)
....+...+ . .+...... .........+...++|+++++|++|..++.. ..+
T Consensus 186 -~~~~~~~~~-----g---~~~~~~~~------------------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~ 238 (283)
T PLN02442 186 -GQKAFTNYL-----G---SDKADWEE------------------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPE 238 (283)
T ss_pred -hhHHHHHHc-----C---CChhhHHH------------------cChhhhhhhccccCCCEEEEECCCCccccccccHH
Confidence 000000000 0 00000000 0000111123456789999999999998853 233
Q ss_pred HHHHHhC--CCCeEEEEecCCCcccc
Q 020916 270 NMKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
.+.+.+. +.++++++++|.+|..+
T Consensus 239 ~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 239 NFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 3333332 24689999999999765
No 76
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=2.9e-18 Score=122.41 Aligned_cols=217 Identities=21% Similarity=0.191 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC-c--EEEE
Q 020916 61 PSKPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD-K--CVLV 135 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~-~--~~lv 135 (320)
++...+|++||+-++... ....++..|.+. +.++.+|++|.|+|...-..-.....++|+..+++++... + .+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 467899999999887763 345567888888 9999999999999987665555556679999999998533 2 4688
Q ss_pred EeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHH--HhHhhhccccCCch
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKAL--LSVATYKKLWFPSC 213 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 213 (320)
|||-||.+++.+|.++++ ++-+|.+++-........ ..+.+..+....+- +... .+....+..
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-------------eRlg~~~l~~ike~Gfid~~-~rkG~y~~r 175 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-------------ERLGEDYLERIKEQGFIDVG-PRKGKYGYR 175 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccchhcchh-------------hhhcccHHHHHHhCCceecC-cccCCcCce
Confidence 999999999999999987 777776665442211110 00111111111000 0000 000001111
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC--CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVP--NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
+..+-+.. . ...+...... ..+||||-+||..|.++|.+.+..+++.++ +.++.++||+.|.
T Consensus 176 vt~eSlmd-------------r-Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~--nH~L~iIEgADHn 239 (269)
T KOG4667|consen 176 VTEESLMD-------------R-LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP--NHKLEIIEGADHN 239 (269)
T ss_pred ecHHHHHH-------------H-HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc--CCceEEecCCCcC
Confidence 11111110 0 0111111222 247999999999999999999999999999 7999999999998
Q ss_pred cccCChHHHHHHHHHHHH
Q 020916 292 VHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~ 309 (320)
.... ..+.......|..
T Consensus 240 yt~~-q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 240 YTGH-QSQLVSLGLEFIK 256 (269)
T ss_pred ccch-hhhHhhhcceeEE
Confidence 6543 3344445555543
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=1.7e-17 Score=131.45 Aligned_cols=185 Identities=16% Similarity=0.183 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHhhc-c-ceEEecCC--CCCCCCCCCC--------------------CCCCh-h
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGALTK-K-YSVYIPDL--LFFGGSITDE--------------------ADRSP-T 114 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~~-~-~~vi~~d~--~G~G~s~~~~--------------------~~~~~-~ 114 (320)
+.|+|+++||++++.. .|... +..+.. . +.|+++|. +|+|.+.... ..+.. .
T Consensus 41 ~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 5799999999999888 77542 344543 3 99999998 5555332100 01122 2
Q ss_pred HHHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcC
Q 020916 115 FQAQCLATGLAK---LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPN 191 (320)
Q Consensus 115 ~~~~~l~~~l~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
..++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++....... ..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------~~ 180 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC-------------------PW 180 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC-------------------cc
Confidence 345777777776 35568999999999999999999999999999998877532100 00
Q ss_pred cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCH-HHHHH
Q 020916 192 SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNV-ELAHN 270 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~ 270 (320)
....+...+ .. +...... . ....... .. ....|+++.+|+.|+.++. .....
T Consensus 181 ~~~~~~~~l----~~----~~~~~~~------~---~~~~~~~---------~~-~~~~plli~~G~~D~~v~~~~~~~~ 233 (275)
T TIGR02821 181 GQKAFSAYL----GA----DEAAWRS------Y---DASLLVA---------DG-GRHSTILIDQGTADQFLDEQLRPDA 233 (275)
T ss_pred hHHHHHHHh----cc----cccchhh------c---chHHHHh---------hc-ccCCCeeEeecCCCcccCccccHHH
Confidence 000001100 00 0000000 0 0000000 01 2356899999999999997 34444
Q ss_pred HHHHhC--CCCeEEEEecCCCcccc
Q 020916 271 MKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 271 ~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
+.+.+. +..+++.+++|++|.+.
T Consensus 234 ~~~~l~~~g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 234 FEQACRAAGQALTLRRQAGYDHSYY 258 (275)
T ss_pred HHHHHHHcCCCeEEEEeCCCCccch
Confidence 444443 24688999999999865
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.79 E-value=1.4e-17 Score=133.57 Aligned_cols=241 Identities=16% Similarity=0.106 Sum_probs=133.3
Q ss_pred HhcCCCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEE
Q 020916 17 KMAGVQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVY 94 (320)
Q Consensus 17 ~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi 94 (320)
+..+...+.++++ .|.+|..+..-++. .++.|+||++.|+-+.....|..+.+.|... +.++
T Consensus 159 ~l~~~~i~~v~iP~eg~~I~g~LhlP~~----------------~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~L 222 (411)
T PF06500_consen 159 KLSDYPIEEVEIPFEGKTIPGYLHLPSG----------------EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAML 222 (411)
T ss_dssp HHSSSEEEEEEEEETTCEEEEEEEESSS----------------SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEE
T ss_pred HhCCCCcEEEEEeeCCcEEEEEEEcCCC----------------CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEE
Confidence 3345445555554 56777776655431 2356788888888777763455555678766 9999
Q ss_pred ecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 95 IPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 95 ~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
++|.||.|.|.......+.+.+...+.+.+... +..++.++|.|+||++|.++|..+++|++++|..+++....-..
T Consensus 223 tvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 223 TVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp EE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-
T ss_pred EEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc
Confidence 999999999865432233344455555555544 34589999999999999999999889999999999875321100
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC--CCC--CC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD--PTV--PN 247 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~ 247 (320)
. ... ...|......+...+.........+...+...... ..+ .+
T Consensus 303 ~-~~~-------------------------------~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr 350 (411)
T PF06500_consen 303 P-EWQ-------------------------------QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRR 350 (411)
T ss_dssp H-HHH-------------------------------TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-
T ss_pred H-HHH-------------------------------hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCC
Confidence 0 000 00111111111111111111122222222222221 233 67
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCC-cccccCChHHHHHHHHHHHHhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG-HLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~~ 311 (320)
..+|+|.+.|++|+++|.+..+-++..-. +.+...++... |.- -+.-...+.+||+..
T Consensus 351 ~~~plL~i~~~~D~v~P~eD~~lia~~s~--~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 351 CPTPLLAINGEDDPVSPIEDSRLIAESST--DGKALRIPSKPLHMG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp BSS-EEEEEETT-SSS-HHHHHHHHHTBT--T-EEEEE-SSSHHHH----HHHHHHHHHHHHHHH
T ss_pred CCcceEEeecCCCCCCCHHHHHHHHhcCC--CCceeecCCCccccc----hHHHHHHHHHHHHHh
Confidence 88999999999999999999988888765 77888887544 332 235566777787653
No 79
>PLN00021 chlorophyllase
Probab=99.78 E-value=2.4e-17 Score=131.28 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-------hCCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-------LGVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~ 132 (320)
+..|+|||+||++.+.. .|..+++.|+++ |.|+++|++|++.+.......+.....+.+.+.++. .+.+++
T Consensus 50 g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 46799999999999988 999999999988 999999999875432111001111122222222222 234679
Q ss_pred EEEEeChhHHHHHHHHHhCcc-----ccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~ 165 (320)
+++|||+||.+++.+|..+++ +++++|++++..
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 999999999999999998874 578889888764
No 80
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.77 E-value=4.9e-18 Score=129.80 Aligned_cols=193 Identities=17% Similarity=0.238 Sum_probs=119.2
Q ss_pred cHHHHHHHhhcc-ceEEecCCCCCCCCCCCC----CCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHH
Q 020916 79 TWQFQVGALTKK-YSVYIPDLLFFGGSITDE----ADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~ 147 (320)
.|......|++. |.|+.+|+||.+...... ....-...++|+.+.++.+ +.+++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 455667788777 999999999977432110 1112223466666666655 34689999999999999999
Q ss_pred HHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh
Q 020916 148 AELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227 (320)
Q Consensus 148 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (320)
+.++|++++++|..++............. +.... .......+.. ...+ .
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~---~~~~-~------- 130 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI-------------------YTKAE-YLEYGDPWDN---PEFY-R------- 130 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC-------------------HHHGH-HHHHSSTTTS---HHHH-H-------
T ss_pred hcccceeeeeeeccceecchhcccccccc-------------------ccccc-ccccCccchh---hhhh-h-------
Confidence 99999999999998887643221110000 00000 0000000000 0000 0
Q ss_pred hHHHHhhhhhccCCCCCCCC--CCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHH
Q 020916 228 ERAELLEGLLISNKDPTVPN--FPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNR 302 (320)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~ 302 (320)
....+. .+.+ +++|+|+++|++|..+|++.+..+.+.+. +.+++++++|++||.+.. +......+
T Consensus 131 ----~~s~~~------~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~ 200 (213)
T PF00326_consen 131 ----ELSPIS------PADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYE 200 (213)
T ss_dssp ----HHHHGG------GGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHH
T ss_pred ----hhcccc------ccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHH
Confidence 001100 1122 78999999999999999999888888775 346899999999996553 45567888
Q ss_pred HHHHHHHhhh
Q 020916 303 CLKQFLASLH 312 (320)
Q Consensus 303 ~i~~fl~~~~ 312 (320)
.+.+|+++..
T Consensus 201 ~~~~f~~~~l 210 (213)
T PF00326_consen 201 RILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999998764
No 81
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.77 E-value=7.8e-17 Score=124.80 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=136.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC-cEEEEEeChhH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD-KCVLVGFSYGG 141 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS~Gg 141 (320)
++|+|+|+.+++.. .|..+++.|... +.|++++.+|.+.. .....+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999 999999999997 99999999999822 234478999999988888877655 99999999999
Q ss_pred HHHHHHHHhC---ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHH
Q 020916 142 MVSFKVAELY---PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF 218 (320)
Q Consensus 142 ~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
.+|.++|.+. ...+..++++++.+........... . ....+...+........ ........
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~--~~~~~~~~ 141 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSRE--P------------SDEQFIEELRRIGGTPD--ASLEDEEL 141 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHH--C------------HHHHHHHHHHHHCHHHH--HHCHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhh--h------------hHHHHHHHHHHhcCCch--hhhcCHHH
Confidence 9999999764 3358999999976532211000000 0 00001111111100000 00000111
Q ss_pred HHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH---HHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 219 LEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE---LAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
................. .. ......-.+|.++.....|+..... ....+.+... ...+++.++| +|+.++.
T Consensus 142 ~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~v~G-~H~~~l~ 215 (229)
T PF00975_consen 142 LARLLRALRDDFQALEN---YS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHDVPG-DHFSMLK 215 (229)
T ss_dssp HHHHHHHHHHHHHHHHT---CS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEEESS-ETTGHHS
T ss_pred HHHHHHHHHHHHHHHhh---cc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEEEcC-CCcEecc
Confidence 11111111111111111 10 1111111467889999999887766 3334666665 5678899986 9998887
Q ss_pred -ChHHHHHHHHHHH
Q 020916 296 -RPCAYNRCLKQFL 308 (320)
Q Consensus 296 -~~~~~~~~i~~fl 308 (320)
+..++++.|.++|
T Consensus 216 ~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 216 PHVAEIAEKIAEWL 229 (229)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccC
Confidence 7788888888875
No 82
>PRK10162 acetyl esterase; Provisional
Probab=99.75 E-value=5e-16 Score=125.37 Aligned_cols=213 Identities=14% Similarity=0.056 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHH---HHHHHHHHHhCC--Cc
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQA---QCLATGLAKLGV--DK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~---~~l~~~l~~~~~--~~ 131 (320)
..|+||++||.+ ++.. .|..+++.|++. +.|+.+|+|.......+ ...++.. +.+.+..+.++. ++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p---~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFP---QAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCC---CcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 568999999977 4555 788888888874 99999999965433222 1233322 223333334443 58
Q ss_pred EEEEEeChhHHHHHHHHHhC------ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhh
Q 020916 132 CVLVGFSYGGMVSFKVAELY------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATY 205 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (320)
++|+|+|+||.+++.++... +.++.+++++.+......... ..... .
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s---~~~~~-----~------------------- 208 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS---RRLLG-----G------------------- 208 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh---HHHhC-----C-------------------
Confidence 99999999999999998653 356889999887654211000 00000 0
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEE
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQ 283 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 283 (320)
....+.......+.+.+..+......-+... ....+..--.|+++++|+.|++.+ ....+.+.+. +..++++
T Consensus 209 ~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p----~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 209 VWDGLTQQDLQMYEEAYLSNDADRESPYYCL----FNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred CccccCHHHHHHHHHHhCCCccccCCcccCc----chhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 0000111111122222211110000000000 001121122489999999999864 4555555553 3468999
Q ss_pred EecCCCcccccC-----ChHHHHHHHHHHHHhh
Q 020916 284 GIKKAGHLVHLE-----RPCAYNRCLKQFLASL 311 (320)
Q Consensus 284 ~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 311 (320)
+++|..|.+..- ..++..+.+.+||++.
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 999999976532 2345666777787654
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.74 E-value=1.1e-16 Score=122.17 Aligned_cols=178 Identities=20% Similarity=0.272 Sum_probs=107.2
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHH-Hhhcc-ceEEecCCCC------CCCC--CCCC----CC------CChhHHHHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVG-ALTKK-YSVYIPDLLF------FGGS--ITDE----AD------RSPTFQAQC 119 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~-~l~~~-~~vi~~d~~G------~G~s--~~~~----~~------~~~~~~~~~ 119 (320)
.+..++||++||+|.+.. .+..+.. .+... ..++.++-|. .|.. ..-. .. ..+...++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 357899999999999987 7776665 22222 6777765442 1220 1100 00 112223344
Q ss_pred HHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHH
Q 020916 120 LATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVK 194 (320)
Q Consensus 120 l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.++++.. ..++++|+|+|+||.+++.++.++|+.+.++|.+++.........
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~---------------------- 147 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE---------------------- 147 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH----------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc----------------------
Confidence 55555432 346799999999999999999999999999999997653211000
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHH
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQ 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 274 (320)
....... +.|++++||.+|+++|.+..+...+.
T Consensus 148 ---------------------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~ 180 (216)
T PF02230_consen 148 ---------------------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEF 180 (216)
T ss_dssp ---------------------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccC--CCcEEEEecCCCCcccHHHHHHHHHH
Confidence 0000111 67999999999999999988887777
Q ss_pred hC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 275 LG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 275 ~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+. ..+++++.++|.||... .+..+.+.+||++.
T Consensus 181 L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 181 LKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 75 23689999999999875 44556688888764
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.73 E-value=4.5e-16 Score=124.13 Aligned_cols=229 Identities=16% Similarity=0.069 Sum_probs=128.5
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCC-CCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSI-TDE 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~-~~~ 108 (320)
+|.+++.|...|.. ..++.|.||.+||.++... .|...+..-...+.|+.+|.||+|... ...
T Consensus 65 ~g~~V~g~l~~P~~---------------~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 65 DGSRVYGWLYRPKN---------------AKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp GGEEEEEEEEEES----------------SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred CCCEEEEEEEecCC---------------CCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCcc
Confidence 56777776665531 1246789999999999877 776666554455999999999999322 110
Q ss_pred -------C------CCC------hhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 109 -------A------DRS------PTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 109 -------~------~~~------~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
. ..+ ...+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +|++++...|
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP 207 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVP 207 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESE
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCC
Confidence 0 011 112334555555544 2357999999999999999999875 6999888877
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
...-... .+.... ...+-.....+.+..-.........+..+...+...
T Consensus 208 ~l~d~~~----------------------------~~~~~~---~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~n 256 (320)
T PF05448_consen 208 FLCDFRR----------------------------ALELRA---DEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVN 256 (320)
T ss_dssp SSSSHHH----------------------------HHHHT-----STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHH
T ss_pred Cccchhh----------------------------hhhcCC---ccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHH
Confidence 5421110 000000 000111122222211112222223333333334444
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
-.+.|+||+++-.|-.|.++|+...-.....++ ..+++.+++..||.... +.-.+...+||.+
T Consensus 257 fA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~-~~K~l~vyp~~~He~~~---~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 257 FARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP-GPKELVVYPEYGHEYGP---EFQEDKQLNFLKE 319 (320)
T ss_dssp HGGG--SEEEEEEETT-SSS-HHHHHHHHCC---SSEEEEEETT--SSTTH---HHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEecCCCCCCchhHHHHHhccC-CCeeEEeccCcCCCchh---hHHHHHHHHHHhc
Confidence 567789999999999999999999999999998 67899999999996542 2226667777765
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.73 E-value=3.6e-16 Score=119.14 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=72.2
Q ss_pred CCCCeEEEEcCCCCCccccHH---HHHHHhhcc-ceEEecCCCCCCCCCCCCCCC------ChhHHHHHHHHHHHHh---
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ---FQVGALTKK-YSVYIPDLLFFGGSITDEADR------SPTFQAQCLATGLAKL--- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~---~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~------~~~~~~~~l~~~l~~~--- 127 (320)
+..|+||++||.+++.. .+. .+...+.+. +.|+++|++|++.+......+ .......++..+++.+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999998877 554 244444444 999999999987543211000 0011233333333332
Q ss_pred -C--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 -G--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 -~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+ .++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 2 3589999999999999999999999999998888765
No 86
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=9.6e-17 Score=131.56 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCCCCcc-ccHHH-HHHHhh--c-cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CC
Q 020916 61 PSKPVVVLVHGFAAEGI-VTWQF-QVGALT--K-KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~-~~~~~-~~~~l~--~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~ 129 (320)
.++|++|+|||++++.. ..|.. +.+.|. . +++||++|++|+|.+..+........+++++.++++.+ +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 47899999999987542 15665 555553 2 49999999999998876544344456677777777765 36
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++++||||||||.+|..++.+.|++|.++++++|..+
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 7999999999999999999999999999999999754
No 87
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.72 E-value=5.2e-16 Score=125.86 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=152.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+|+||++..+.+.....-+.+++.|-+.+.|+..|+..-+..+......+++++++.+.+++++++.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999998766633356777777789999999987766554556789999999999999999876 99999999999
Q ss_pred HHHHHHHhC-----ccccccEEEeccccccccc-cccccc---------ccccccc-------cccccCcCc--------
Q 020916 143 VSFKVAELY-----PNLVQAMVVSGSILAMTDS-INETNL---------NRLGVSS-------SSELLLPNS-------- 192 (320)
Q Consensus 143 ~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~-~~~~~~---------~~~~~~~-------~~~~~~~~~-------- 192 (320)
+++.+++.. |.+++++++++++..+... .....+ ....... ..+...+..
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 988776654 6679999999998876442 111110 0000000 000000000
Q ss_pred ------HHHHHHHHhHhhhccccCCchhHHHHHHHHhcC----hhhHHHHhhhhhc-----------cCCCCCCCCCC-C
Q 020916 193 ------VKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN----RKERAELLEGLLI-----------SNKDPTVPNFP-Q 250 (320)
Q Consensus 193 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~-~ 250 (320)
......++.... ............+.+.+... .....+++..+.. .....++.+|+ +
T Consensus 261 mnp~r~~~~~~~~~~~l~-~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLV-KGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHh-cCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 000111111100 00000001111111211111 1111122222211 12225677899 9
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHh---CCCCeEEEEecCCCcccccC---ChHHHHHHHHHHHHh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQL---GADHVTFQGIKKAGHLVHLE---RPCAYNRCLKQFLAS 310 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 310 (320)
|+|.|.|+.|.++++.+++.+.+.. ++...+.++.+++||+-.+. ..+++.-.|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999999988874 54566677887899997754 457899999999975
No 88
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.71 E-value=5.2e-16 Score=112.37 Aligned_cols=156 Identities=17% Similarity=0.215 Sum_probs=103.4
Q ss_pred EEEEcCCCCCccccHHHHH-HHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQV-GALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVS 144 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~-~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a 144 (320)
|+++||++++....|.... +.|...++|-.+++ ...+.+.+...+.+.+.... ++++|||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999988765776655 55655577777776 12366777777777777664 579999999999999
Q ss_pred HHHH-HhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh
Q 020916 145 FKVA-ELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223 (320)
Q Consensus 145 ~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
+.++ .....+|.+++|++++.............
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~---------------------------------------------- 103 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELD---------------------------------------------- 103 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGC----------------------------------------------
T ss_pred HHHHhhcccccccEEEEEcCCCcccccchhhhcc----------------------------------------------
Confidence 9999 66778999999999875310000000000
Q ss_pred cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 224 ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.........+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 104 ---------------~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 104 ---------------GFTPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAASG 158 (171)
T ss_dssp ---------------CCTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGGT
T ss_pred ---------------ccccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCcccccC
Confidence 0000012234566799999999999999999999999 689999999999976543
No 89
>COG0400 Predicted esterase [General function prediction only]
Probab=99.71 E-value=5e-16 Score=114.87 Aligned_cols=174 Identities=20% Similarity=0.302 Sum_probs=119.2
Q ss_pred cCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC--CCCCCC----CCCCCChhH-------HHHHHHHHHH
Q 020916 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF--FGGSIT----DEADRSPTF-------QAQCLATGLA 125 (320)
Q Consensus 59 ~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G--~G~s~~----~~~~~~~~~-------~~~~l~~~l~ 125 (320)
+++..|+||++||+|++.. .+-++.+.+..++.++.+.-+- .|.-.. ....++.++ +++.+..+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3457789999999999988 7777777776667776654221 111100 011122222 3444445555
Q ss_pred HhCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHh
Q 020916 126 KLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 126 ~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
..++ ++++++|+|.||++++.+..++|+.++++|++.+.......
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 5565 68999999999999999999999999999999987632210
Q ss_pred hhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeE
Q 020916 204 TYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVT 281 (320)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~ 281 (320)
..-..-..|+++++|+.|+++|.....++.+.+. ..+++
T Consensus 140 ---------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~ 180 (207)
T COG0400 140 ---------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVE 180 (207)
T ss_pred ---------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEE
Confidence 0011235689999999999999988888777765 35788
Q ss_pred EEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 282 FQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 282 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
...++ .||....+ -.+.+.+|+.+
T Consensus 181 ~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 181 VRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred EEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 88888 69987644 44455556654
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.69 E-value=7.9e-16 Score=117.94 Aligned_cols=177 Identities=23% Similarity=0.253 Sum_probs=114.3
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CC--C--------ChhHHHHHHHHHHHHhC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-AD--R--------SPTFQAQCLATGLAKLG 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~--~--------~~~~~~~~l~~~l~~~~ 128 (320)
++.|.||++|++.+-.. ..+.+++.|++. |.|+++|+-+-....... .. . ..+...+++.+.++.+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 36799999999988776 788899999998 999999986443311111 00 0 12344566666666652
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
.+++.++|+|+||.+++.++.+. +.++++|..-+......
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------------- 136 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------------- 136 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------------
Confidence 35799999999999999999887 57888887766110000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
. . ....++++|+++++|++|+.++.+..+.+.+.+. +...
T Consensus 137 -----------~------------------~---------~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 178 (218)
T PF01738_consen 137 -----------P------------------L---------EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDV 178 (218)
T ss_dssp -----------H------------------H---------HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTE
T ss_pred -----------c------------------h---------hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcE
Confidence 0 0 0134578899999999999999998888777772 3589
Q ss_pred EEEEecCCCcccccCCh--------HHHHHHHHHHHHh
Q 020916 281 TFQGIKKAGHLVHLERP--------CAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 310 (320)
++++++|++|.+..... ++..+.+.+||++
T Consensus 179 ~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 179 EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999999998875321 3455566667654
No 91
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.69 E-value=2.4e-15 Score=130.43 Aligned_cols=123 Identities=16% Similarity=0.119 Sum_probs=92.9
Q ss_pred EcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc--cH-HHHHHHhhcc-ceEEecCCCCCC
Q 020916 27 EIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV--TW-QFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~--~~-~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
...||.+|++..+.+.. .++.|+||++||++.+... .+ ......|.++ |.|+++|+||+|
T Consensus 2 ~~~DG~~L~~~~~~P~~----------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g 65 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG----------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRG 65 (550)
T ss_pred cCCCCCEEEEEEEecCC----------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccc
Confidence 45689999886665421 1367899999999876420 12 2234566666 999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.|........ ...++|+.++++.+. .+++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 66 ~S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 66 ASEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cCCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 9987654333 456788888888763 25899999999999999999999999999998877654
No 92
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.69 E-value=4.8e-15 Score=104.51 Aligned_cols=169 Identities=19% Similarity=0.276 Sum_probs=119.9
Q ss_pred CCCCeEEEEcCCC-----CCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC---CC-
Q 020916 61 PSKPVVVLVHGFA-----AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG---VD- 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~-----~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~---~~- 130 (320)
+..|..|++|.-+ .+.. .-..++..|.+. |.++.+|+||.|.|...... ...+ .+|..++++.+. ..
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-GiGE-~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-GIGE-LEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC-Ccch-HHHHHHHHHHHHhhCCCc
Confidence 4778889988643 2333 445667788888 99999999999999876533 2222 344445554442 22
Q ss_pred c-EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 131 K-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 131 ~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
+ ..+.|+|+|+.+++.+|.+.|+ ....+.+.++....
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----------------------------------------- 140 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----------------------------------------- 140 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-----------------------------------------
Confidence 2 4678999999999999999876 45555555443100
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCC
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG 289 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 289 (320)
....+....+|.++|+|+.|.+++.....++.+.. ..+++++++++
T Consensus 141 -------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~---~~~~i~i~~a~ 186 (210)
T COG2945 141 -------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI---KITVITIPGAD 186 (210)
T ss_pred -------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC---CCceEEecCCC
Confidence 00023445678999999999999998888888763 67899999999
Q ss_pred cccccCChHHHHHHHHHHHH
Q 020916 290 HLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 290 H~~~~~~~~~~~~~i~~fl~ 309 (320)
||++-. -..+.+.|.+||.
T Consensus 187 HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 187 HFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred ceeccc-HHHHHHHHHHHhh
Confidence 997754 6678899999985
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.68 E-value=6.8e-15 Score=122.96 Aligned_cols=223 Identities=13% Similarity=0.033 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCC
Q 020916 61 PSKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~ 130 (320)
..+.|||+++.+-.... .+ +.++++|.++ +.|+.+|+++-+... ...+++++++.+.+.++.+ +.+
T Consensus 213 v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 213 QHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred cCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 35789999999985544 55 5688888888 999999999865543 4577888887777777765 567
Q ss_pred cEEEEEeChhHHHHHH----HHHhCcc-ccccEEEecccccccccccccccc-cccc-----cccccccCcC-----cHH
Q 020916 131 KCVLVGFSYGGMVSFK----VAELYPN-LVQAMVVSGSILAMTDSINETNLN-RLGV-----SSSSELLLPN-----SVK 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~-----~~~ 194 (320)
++.++|+|+||.+++. +++++++ +|++++++.++..+........+. .... ........+. .+.
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~ 368 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFA 368 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 8999999999999997 7788886 899999999988765322111110 0000 0000000000 000
Q ss_pred H------H-HHHHhHhhhccccCCchhHHHHHHHHhcCh-hhHHHHhhhhhc------------cCCCCCCCCCCCcEEE
Q 020916 195 G------L-KALLSVATYKKLWFPSCLYKDFLEVMFANR-KERAELLEGLLI------------SNKDPTVPNFPQRVHL 254 (320)
Q Consensus 195 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~P~l~ 254 (320)
. + ................+ ...+......-. .....++. +.. .....++.+|+||+++
T Consensus 369 ~LrP~dliw~y~v~~yllg~~p~~fd-ll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~ 446 (560)
T TIGR01839 369 WMRPNDLIWNYWVNNYLLGNEPPAFD-ILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEVCGTPIDLKKVKCDSFS 446 (560)
T ss_pred hcCchhhhHHHHHHHhhcCCCcchhh-HHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEECCEEechhcCCCCeEE
Confidence 0 0 00000000000000000 111111110000 01111111 111 1222578889999999
Q ss_pred EecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 255 LWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
+.|..|.++|++.+..+.+.+. .+++++..+ +||.
T Consensus 447 va~~~DHIvPw~s~~~~~~l~g-s~~~fvl~~-gGHI 481 (560)
T TIGR01839 447 VAGTNDHITPWDAVYRSALLLG-GKRRFVLSN-SGHI 481 (560)
T ss_pred EecCcCCcCCHHHHHHHHHHcC-CCeEEEecC-CCcc
Confidence 9999999999999999999887 467777776 4885
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=1.7e-16 Score=124.75 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCCCCc-cccHHHH-HHH-hhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCc
Q 020916 62 SKPVVVLVHGFAAEG-IVTWQFQ-VGA-LTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~-~~~~~~~-~~~-l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 131 (320)
++|++|+|||++++. . .|... .+. |... ++|+++|+++++.+..+....+....++++.++++.+ +.++
T Consensus 35 ~~p~vilIHG~~~~~~~-~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEE-SWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCC-cHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 789999999999887 4 66544 443 4444 9999999998843322222234444556666666654 3468
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+++||||+||.+|..++.++|++|.++++++|....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 999999999999999999999999999999987643
No 95
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=9.5e-14 Score=106.38 Aligned_cols=177 Identities=22% Similarity=0.210 Sum_probs=132.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC-CCCCCCC-------C----CCChhHHHHHHHHHHHHhC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF-GGSITDE-------A----DRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~-G~s~~~~-------~----~~~~~~~~~~l~~~l~~~~ 128 (320)
..|.||++|++.+-.. ..+..++.|+.. |.|+++|+-+. |.+.... . ..+......|+.+.++.+.
T Consensus 26 ~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~ 104 (236)
T COG0412 26 GFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLA 104 (236)
T ss_pred CCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHH
Confidence 4489999999998888 899999999999 99999998763 3332211 0 1223566778888887773
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
.+++.++|+||||.+++.++...| .+++.+..-+......
T Consensus 105 ~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~--------------------------------- 150 (236)
T COG0412 105 RQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD--------------------------------- 150 (236)
T ss_pred hCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc---------------------------------
Confidence 457999999999999999999887 6888887665541100
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC--Ce
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD--HV 280 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~ 280 (320)
.....++++|+|+..|+.|..+|......+.+.+... .+
T Consensus 151 ---------------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 151 ---------------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKV 191 (236)
T ss_pred ---------------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCe
Confidence 0124678999999999999999999888888777623 67
Q ss_pred EEEEecCCCcccccCC-----------hHHHHHHHHHHHHhhh
Q 020916 281 TFQGIKKAGHLVHLER-----------PCAYNRCLKQFLASLH 312 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 312 (320)
++.+++++.|.++.+. .+.-.+.+.+|+++..
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999989887432 2456677778887653
No 96
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.65 E-value=1.2e-14 Score=106.49 Aligned_cols=229 Identities=15% Similarity=0.228 Sum_probs=120.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC-
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF- 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~- 101 (320)
+.+.++||..|++|...|....+ ...++||+.+|++.... .|..++.+|+.+ |+|+.+|...|
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~--------------~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~Hv 69 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEP--------------KRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHV 69 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS-----------------S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--
T ss_pred ceeEcCCCCEEEEeccCCCCCCc--------------ccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccc
Confidence 56788899999999988754332 25689999999999988 999999999999 99999998877
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|.|++.-..++++...+++..+++.+ +..++.|+.-|+.|.+|+..|.+- .+.-+|..-+......... .....
T Consensus 70 GlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe-~al~~ 146 (294)
T PF02273_consen 70 GLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLE-KALGY 146 (294)
T ss_dssp -----------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHH-HHHSS
T ss_pred cCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHH-HHhcc
Confidence 99998888899999888988888776 567899999999999999999854 3666676655443211100 00000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
-........ .+... . +....+ -.+.|+...+ .......... ..+..+.+|++.+++
T Consensus 147 Dyl~~~i~~-lp~dl-------d---feGh~l---~~~vFv~dc~e~~w~~l~ST~---------~~~k~l~iP~iaF~A 203 (294)
T PF02273_consen 147 DYLQLPIEQ-LPEDL-------D---FEGHNL---GAEVFVTDCFEHGWDDLDSTI---------NDMKRLSIPFIAFTA 203 (294)
T ss_dssp -GGGS-GGG---SEE-------E---ETTEEE---EHHHHHHHHHHTT-SSHHHHH---------HHHTT--S-EEEEEE
T ss_pred chhhcchhh-CCCcc-------c---cccccc---chHHHHHHHHHcCCccchhHH---------HHHhhCCCCEEEEEe
Confidence 000000000 00000 0 000000 0111222211 1111111111 234677899999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
++|.++......++...+.+..+++..++|++|.+-
T Consensus 204 ~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 204 NDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp TT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred CCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999999999999988767889999999999865
No 97
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=3.4e-14 Score=110.22 Aligned_cols=129 Identities=21% Similarity=0.321 Sum_probs=104.5
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--------c--
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK--------K-- 90 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--------~-- 90 (320)
+.....++ .|.++|+....++..+. ...-.|++++|||+++-+ .|-.+++.|.+ .
T Consensus 124 f~qykTeI-eGL~iHFlhvk~p~~k~-------------~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~ 188 (469)
T KOG2565|consen 124 FKQYKTEI-EGLKIHFLHVKPPQKKK-------------KKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYA 188 (469)
T ss_pred hhhhhhhh-cceeEEEEEecCCcccc-------------CCcccceEEecCCCchHH-HHHhhhhhhcCccccCCcccee
Confidence 44455667 59999997766643321 123458999999999999 88888887753 2
Q ss_pred ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 91 YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
|.||++.+||+|-|+.+. ...+....|.-+..++=.++..++.|-|-.||+.++..+|..+|++|.|+=+-.+.
T Consensus 189 FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred EEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 899999999999999877 45788888899999999999999999999999999999999999999887554433
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.61 E-value=1.5e-15 Score=116.95 Aligned_cols=231 Identities=16% Similarity=0.095 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCC----CCCCCCCCCCCCChhHHHHHHHHHHHHh-------
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLL----FFGGSITDEADRSPTFQAQCLATGLAKL------- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~l~~~l~~~------- 127 (320)
....||||.|++..-. ++...+++.|.+. |.|+-+.++ |+|.+ +++.-++||.++++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHHHHHHHHHHhhccc
Confidence 5668999999986443 3677888999765 999988765 45544 6777788888888765
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCc-----cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHh
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYP-----NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS 201 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
+.++|+|+|||.|+.-+++++.... ..|+++||-+|.......... ... ...........++.+.
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~--~~~-------~~~~~~~v~~A~~~i~ 175 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNF--LGE-------REAYEELVALAKELIA 175 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTS--HHH----------HHHHHHHHHHHHH
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhc--ccc-------hHHHHHHHHHHHHHHH
Confidence 2458999999999999999997652 569999999987643211110 000 0000000011111110
Q ss_pred HhhhccccCC----------chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHH
Q 020916 202 VATYKKLWFP----------SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHN 270 (320)
Q Consensus 202 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 270 (320)
..... ..++ ..+.....-..........-+-.++........+..+.+|+|++.+++|..+|... .+.
T Consensus 176 ~g~~~-~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~ 254 (303)
T PF08538_consen 176 EGKGD-EILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEA 254 (303)
T ss_dssp CT-TT--GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------
T ss_pred cCCCC-ceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccc
Confidence 00000 0000 00111101111111111111111221111223566778899999999999998754 233
Q ss_pred HHHHhC-CC-----CeEEEEecCCCcccccCCh----HHHHHHHHHHHH
Q 020916 271 MKEQLG-AD-----HVTFQGIKKAGHLVHLERP----CAYNRCLKQFLA 309 (320)
Q Consensus 271 ~~~~~~-~~-----~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 309 (320)
+.+++. .. .....++||++|.+--+.. +.+.+.|..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 444443 00 1224589999999875432 467888888874
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=3.3e-14 Score=105.71 Aligned_cols=226 Identities=19% Similarity=0.188 Sum_probs=144.0
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC-
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE- 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~- 108 (320)
+|.+|..|..-+..+ ++..|.||-.||.++... .|..+...-...|.|+.+|.||.|.|....
T Consensus 65 ~g~rI~gwlvlP~~~---------------~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~ 128 (321)
T COG3458 65 GGARIKGWLVLPRHE---------------KGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTA 128 (321)
T ss_pred CCceEEEEEEeeccc---------------CCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCC
Confidence 567777766554322 256799999999999988 887777666666999999999999884311
Q ss_pred ---CC-----------------CChhHHHHHHHHHHH------HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 109 ---AD-----------------RSPTFQAQCLATGLA------KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 109 ---~~-----------------~~~~~~~~~l~~~l~------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
.. +-......|+..+++ ..+.+++.+.|.|.||.+++.+++..| ++++++..-
T Consensus 129 ~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~ 207 (321)
T COG3458 129 DPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADY 207 (321)
T ss_pred CCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccc
Confidence 00 001112233333333 335678999999999999999988775 799988776
Q ss_pred ccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 163 SILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
|...--+... .......... ...+.+ .........+..+...+..
T Consensus 208 Pfl~df~r~i-------------~~~~~~~yde-------------------i~~y~k---~h~~~e~~v~~TL~yfD~~ 252 (321)
T COG3458 208 PFLSDFPRAI-------------ELATEGPYDE-------------------IQTYFK---RHDPKEAEVFETLSYFDIV 252 (321)
T ss_pred cccccchhhe-------------eecccCcHHH-------------------HHHHHH---hcCchHHHHHHHHhhhhhh
Confidence 6542111100 0000000011 111111 1111133344444445555
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
....++++|+|+..|-.|+++|+...-..+..+. ..+++.+++.-+|.-. |.-..+.+..|+..+
T Consensus 253 n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 253 NLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-TSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hHHHhhccceEEeecccCCCCCChhhHHHhhccc-CCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 5667899999999999999999999999999988 6778888886667644 433444556666554
No 100
>PRK10115 protease 2; Provisional
Probab=99.61 E-value=1.2e-13 Score=121.82 Aligned_cols=221 Identities=13% Similarity=0.087 Sum_probs=133.6
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
+..++...||.+|.++....+... ..++.|+||++||..+.+. ..|......|..+ |.|+.++.|
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~-------------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R 483 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHF-------------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR 483 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCC-------------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC
Confidence 344455569999998443221110 1245699999999877653 3566555666666 999999999
Q ss_pred CCCCCCCC--------CCCCChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc
Q 020916 100 FFGGSITD--------EADRSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD 169 (320)
Q Consensus 100 G~G~s~~~--------~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 169 (320)
|-|.-... ....+++++++.+..+++.= +.+++.+.|.|.||.++..++.++|++++++|...+......
T Consensus 484 Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 484 GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVT 563 (686)
T ss_pred CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhh
Confidence 86543321 12244555544444444331 346899999999999999999999999999998887764322
Q ss_pred cccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC
Q 020916 170 SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
...... .+.....+. .+.. +.. ......+.....-..+.+++
T Consensus 564 ~~~~~~-------------~p~~~~~~~------e~G~---p~~----------------~~~~~~l~~~SP~~~v~~~~ 605 (686)
T PRK10115 564 TMLDES-------------IPLTTGEFE------EWGN---PQD----------------PQYYEYMKSYSPYDNVTAQA 605 (686)
T ss_pred hcccCC-------------CCCChhHHH------HhCC---CCC----------------HHHHHHHHHcCchhccCccC
Confidence 110000 000000000 0000 000 00011111122333456678
Q ss_pred Cc-EEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe---cCCCcccc
Q 020916 250 QR-VHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI---KKAGHLVH 293 (320)
Q Consensus 250 ~P-~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~ 293 (320)
.| +|+++|.+|.-||+..+.++...+. +...+.+++ +++||...
T Consensus 606 ~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 606 YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred CCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 89 5677999999999999988888875 234566777 89999843
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.61 E-value=3e-13 Score=98.99 Aligned_cols=179 Identities=20% Similarity=0.239 Sum_probs=108.6
Q ss_pred EEEEcCCCCCccccHHH--HHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 66 VVLVHGFAAEGIVTWQF--QVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~--~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
|+++||+.++.. +... +.+.+.+. ..+.++|++ .......+.+.++++....+.+.|||.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999887 5543 34555543 567777765 345666788888998888777999999999
Q ss_pred HHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc-hhHHHHH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS-CLYKDFL 219 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 219 (320)
|..|..++.+++ +++ |+++|...+..... ..+...... .+-.. .+.....
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l~-------------------------~~iG~~~~~-~~~e~~~~~~~~~ 120 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELLQ-------------------------DYIGEQTNP-YTGESYELTEEHI 120 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHHH-------------------------HhhCccccC-CCCccceechHhh
Confidence 999999999886 444 88998874322111 110000000 00000 0000000
Q ss_pred HHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH
Q 020916 220 EVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299 (320)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 299 (320)
.. ...+ ......-..+++++.++.|.+++...+.. .+. ++..++.+|++|-+. +-++
T Consensus 121 ~~-----------l~~l-----~~~~~~~~~~~lvll~~~DEvLd~~~a~~---~~~--~~~~~i~~ggdH~f~--~f~~ 177 (187)
T PF05728_consen 121 EE-----------LKAL-----EVPYPTNPERYLVLLQTGDEVLDYREAVA---KYR--GCAQIIEEGGDHSFQ--DFEE 177 (187)
T ss_pred hh-----------cceE-----eccccCCCccEEEEEecCCcccCHHHHHH---Hhc--CceEEEEeCCCCCCc--cHHH
Confidence 00 0000 00112234689999999999999854433 333 445556678899754 4566
Q ss_pred HHHHHHHHH
Q 020916 300 YNRCLKQFL 308 (320)
Q Consensus 300 ~~~~i~~fl 308 (320)
....|.+|+
T Consensus 178 ~l~~i~~f~ 186 (187)
T PF05728_consen 178 YLPQIIAFL 186 (187)
T ss_pred HHHHHHHhh
Confidence 777777775
No 102
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=1.8e-13 Score=99.46 Aligned_cols=255 Identities=13% Similarity=0.052 Sum_probs=144.6
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCC-eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKP-VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
.+..+||..+....+.. ++..+ .|++-.+.+.... .|++++..+++. |.|+.+|+||.|
T Consensus 9 ~l~~~DG~~l~~~~~pA------------------~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g 69 (281)
T COG4757 9 HLPAPDGYSLPGQRFPA------------------DGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIG 69 (281)
T ss_pred ccccCCCccCccccccC------------------CCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEeccccc
Confidence 35566898888876654 12333 3444444455555 899999999988 999999999999
Q ss_pred CCCCCCCC---CChhHHH-HHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-
Q 020916 103 GSITDEAD---RSPTFQA-QCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE- 173 (320)
Q Consensus 103 ~s~~~~~~---~~~~~~~-~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~- 173 (320)
.|...... +...+++ .|+.+.++.++ ..+...||||+||.+.-.+. +++ +..+....+...........
T Consensus 70 ~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~ 147 (281)
T COG4757 70 QSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLR 147 (281)
T ss_pred CCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhh
Confidence 99876533 4555554 36666665553 35799999999999765544 344 45555544444332221111
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
..+..+...... ......+...+....... ..++....+++.+.......... .-......+....+++|+
T Consensus 148 ~~l~~~~l~~lv----~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fd----dp~~~~~~q~yaaVrtPi 219 (281)
T COG4757 148 ERLGAVLLWNLV----GPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFD----DPAMRNYRQVYAAVRTPI 219 (281)
T ss_pred hcccceeecccc----ccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccccc----ChhHhHHHHHHHHhcCce
Confidence 000000000000 000111111111111111 12334444444443321110000 000000112345688999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC----CCcccccCCh-HHHHHHHHHHH
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK----AGHLVHLERP-CAYNRCLKQFL 308 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 308 (320)
..+...+|+.+|+...+.+.+...+...+...++. -||+-...++ |.+.+.+.+|+
T Consensus 220 ~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 220 TFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred eeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999999999999999999888744455555653 4999888777 77777777765
No 103
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.56 E-value=1.9e-12 Score=88.46 Aligned_cols=181 Identities=15% Similarity=0.152 Sum_probs=126.1
Q ss_pred CCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCC-----CCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEE
Q 020916 63 KPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFF-----GGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVL 134 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~-----G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~l 134 (320)
.-+||+-||.+.+.. ......+..|+.. +.|..++++-. |...+++ ...-...+...+.++...+...++++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 348899999987655 2566778888888 99999998742 3222222 22334456677777777777779999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
-|+||||.++..++......|+++++++-+...+.. ++.
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK----------------------------------------Pe~- 132 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK----------------------------------------PEQ- 132 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCCCCC----------------------------------------ccc-
Confidence 999999999999998765569999988865533221 000
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.....+..+++|++|.+|+.|++-..+....+. + +...+++.++++.|.+--
T Consensus 133 -------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--l-s~~iev~wl~~adHDLkp 184 (213)
T COG3571 133 -------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--L-SDPIEVVWLEDADHDLKP 184 (213)
T ss_pred -------------------------chhhhccCCCCCeEEeecccccccCHHHHHhhh--c-CCceEEEEeccCcccccc
Confidence 011257889999999999999997776652221 2 258999999999997542
Q ss_pred ----------CChHHHHHHHHHHHHhhh
Q 020916 295 ----------ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 295 ----------~~~~~~~~~i~~fl~~~~ 312 (320)
++-...++.|..|+.++.
T Consensus 185 ~k~vsgls~~~hL~~~A~~va~~~~~l~ 212 (213)
T COG3571 185 RKLVSGLSTADHLKTLAEQVAGWARRLA 212 (213)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhcC
Confidence 233456777777777653
No 104
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.54 E-value=3.5e-14 Score=88.37 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=60.0
Q ss_pred EEEeeccCCC-CCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHH
Q 020916 53 IEKEALKKPS-KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLA 125 (320)
Q Consensus 53 ~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~ 125 (320)
+...|.++.+ +.+|+++||++.++. .|..+++.|++. |.|+++|+||||.|...... .+++++++|+..+++
T Consensus 5 ~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 5 FYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3333334444 889999999999999 999999999999 99999999999999975543 688899999988764
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.52 E-value=3.7e-12 Score=89.07 Aligned_cols=173 Identities=17% Similarity=0.122 Sum_probs=115.8
Q ss_pred CeEEEEcCCCCCccccHHHHHH-HhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVG-ALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~-~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+.+|++||+.++....|....+ .|. .+-.+++. .......+++++.+.+.+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 5689999999887646654432 222 22222322 112246778888888877777 46799999999999
Q ss_pred HHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHH
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVM 222 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (320)
+++.++.+....|.|++|++++-...+....... .
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~-------------------------------------------~-- 106 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL-------------------------------------------M-- 106 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------------------------c--
Confidence 9999998877789999999987522110000000 0
Q ss_pred hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc---CChHH
Q 020916 223 FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL---ERPCA 299 (320)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~ 299 (320)
.. .......+.-|.+++.+.+|++++++.++.+++.+. ..++.+..+||+--. ..-.+
T Consensus 107 ---------------tf-~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~GHiN~~sG~g~wpe 167 (181)
T COG3545 107 ---------------TF-DPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEGGHINAESGFGPWPE 167 (181)
T ss_pred ---------------cc-CCCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---HhheecccccccchhhcCCCcHH
Confidence 00 001223445689999999999999999999999984 678888888997442 23345
Q ss_pred HHHHHHHHHHhh
Q 020916 300 YNRCLKQFLASL 311 (320)
Q Consensus 300 ~~~~i~~fl~~~ 311 (320)
....+.+|+.+.
T Consensus 168 g~~~l~~~~s~~ 179 (181)
T COG3545 168 GYALLAQLLSRA 179 (181)
T ss_pred HHHHHHHHhhhh
Confidence 666777776553
No 106
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.51 E-value=2.1e-12 Score=101.08 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=86.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhh----ccceEEecCCCCCCCCCCC------CCCCChhHHHHHHHHHHHHhC----
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALT----KKYSVYIPDLLFFGGSITD------EADRSPTFQAQCLATGLAKLG---- 128 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~s~~~------~~~~~~~~~~~~l~~~l~~~~---- 128 (320)
+..|||++|.+|-.. .|..+++.|. .++.|+++.+.||-.+... ...++++++++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 467999999999999 9999887775 3499999999999877654 245889998887777776552
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCc---cccccEEEecccccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSILAM 167 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 167 (320)
..+++|+|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 346999999999999999999998 689999999888643
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.51 E-value=1.2e-12 Score=125.94 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~G 140 (320)
++++++|+||++++.. .|..+.+.|...++|++++.+|+|.+. ...++++.+++++.+.++.+.. ++++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 4578999999999999 999999999888999999999998653 3457999999999999988654 48999999999
Q ss_pred HHHHHHHHHh---CccccccEEEecccc
Q 020916 141 GMVSFKVAEL---YPNLVQAMVVSGSIL 165 (320)
Q Consensus 141 g~~a~~~a~~---~p~~v~~lvl~~~~~ 165 (320)
|.+|.++|.+ .++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999986 467899999988643
No 108
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.51 E-value=3.5e-12 Score=103.61 Aligned_cols=272 Identities=18% Similarity=0.138 Sum_probs=158.8
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH------HHHHhhcc-ce
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF------QVGALTKK-YS 92 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~------~~~~l~~~-~~ 92 (320)
..+.+.|++.||..|........ .+.+|+|++.||+.+++. .|-. ++=.|++. |.
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~-----------------~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYD 108 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRG-----------------KKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYD 108 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCC-----------------CCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCc
Confidence 36788899999987777544431 158899999999999988 7743 34456777 99
Q ss_pred EEecCCCCCCCCCCCC----------CCCChhHHH-HHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc---c
Q 020916 93 VYIPDLLFFGGSITDE----------ADRSPTFQA-QCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN---L 154 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~----------~~~~~~~~~-~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~---~ 154 (320)
|+.-+.||-..|..-. -++++.+++ -||-+.|+++ +.++++.+|||.|+.....++...|+ +
T Consensus 109 VWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~k 188 (403)
T KOG2624|consen 109 VWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKK 188 (403)
T ss_pred eeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhh
Confidence 9999999966554311 124555543 3666666554 66789999999999999999988765 7
Q ss_pred cccEEEecccccccc--cccccccccc------ccccccc-ccCcCcHHHHHHHHhHhhh--------------ccccCC
Q 020916 155 VQAMVVSGSILAMTD--SINETNLNRL------GVSSSSE-LLLPNSVKGLKALLSVATY--------------KKLWFP 211 (320)
Q Consensus 155 v~~lvl~~~~~~~~~--~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 211 (320)
|+..++++|...... .......... ....... .+.+. ....+.+...... ......
T Consensus 189 I~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~-~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~ 267 (403)
T KOG2624|consen 189 IKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPS-NLFIKKFARKICSGSKIFADLCSNFLFLLVGWN 267 (403)
T ss_pred hheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccch-hhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcc
Confidence 999999999874320 1000000000 0000000 01110 0000111110100 000000
Q ss_pred chhHHHH-----HHHHh--cChhhHHHHhhhh--------------------hccCCCCCCCCCCCcEEEEecCCCCCCC
Q 020916 212 SCLYKDF-----LEVMF--ANRKERAELLEGL--------------------LISNKDPTVPNFPQRVHLLWGEDDQIFN 264 (320)
Q Consensus 212 ~~~~~~~-----~~~~~--~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 264 (320)
....... ..... .+......+.+.. ........+.++++|+.+.+|++|..+.
T Consensus 268 ~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 268 SNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred hHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCC
Confidence 0000000 00000 0001111111111 0111224667789999999999999999
Q ss_pred HHHHHHHHHHhCCCCeEEE---EecCCCcccc---cCChHHHHHHHHHHHHhhh
Q 020916 265 VELAHNMKEQLGADHVTFQ---GIKKAGHLVH---LERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~---~~~~~gH~~~---~~~~~~~~~~i~~fl~~~~ 312 (320)
++....+...++ +.... .+++-.|.-+ .+.++++.+.|.+.++...
T Consensus 348 ~~DV~~~~~~~~--~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 348 PEDVLILLLVLP--NSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHhcc--cccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 999998888777 33322 2788899765 3678999999999988765
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.51 E-value=7.9e-13 Score=101.04 Aligned_cols=190 Identities=15% Similarity=0.148 Sum_probs=100.8
Q ss_pred EEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH----HH-----hCCCc
Q 020916 66 VVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL----AK-----LGVDK 131 (320)
Q Consensus 66 vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l----~~-----~~~~~ 131 (320)
||++||.+. +.. ....++..+++ . +.|+.+|+|=.. ........+|+.+.+ ++ .+.++
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccccc
Confidence 799999874 333 45566666665 4 999999999321 223334444444444 33 23568
Q ss_pred EEEEEeChhHHHHHHHHHhCcc----ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
++|+|+|.||.+++.++....+ .++++++++|.............. .......
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~-----------------------~~~~~~~ 129 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDD-----------------------SNENKDD 129 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHH-----------------------HHHHSTT
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccc-----------------------ccccccc
Confidence 9999999999999999976433 389999999865330000000000 0000000
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI 285 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 285 (320)
...+......+.+.+.............+.. ..+.. -.|+++++|+.|.++ +....+.+.+. +.+++++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~----~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~ 202 (211)
T PF07859_consen 130 PFLPAPKIDWFWKLYLPGSDRDDPLASPLNA----SDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVY 202 (211)
T ss_dssp SSSBHHHHHHHHHHHHSTGGTTSTTTSGGGS----SCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEE
T ss_pred ccccccccccccccccccccccccccccccc----ccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEE
Confidence 1112222222222222111111111121111 01222 238999999999875 44555665554 347899999
Q ss_pred cCCCcccc
Q 020916 286 KKAGHLVH 293 (320)
Q Consensus 286 ~~~gH~~~ 293 (320)
+|.+|.+.
T Consensus 203 ~g~~H~f~ 210 (211)
T PF07859_consen 203 PGMPHGFF 210 (211)
T ss_dssp TTEETTGG
T ss_pred CCCeEEee
Confidence 99999765
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.48 E-value=3.6e-13 Score=117.60 Aligned_cols=89 Identities=20% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC---------C-C-------------CCChhHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD---------E-A-------------DRSPTFQA 117 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~---------~-~-------------~~~~~~~~ 117 (320)
..|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|... . . ..++.+.+
T Consensus 448 g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 4579999999999999 999999999866 99999999999999443 1 1 12667888
Q ss_pred HHHHHHHHHhC----------------CCcEEEEEeChhHHHHHHHHHhC
Q 020916 118 QCLATGLAKLG----------------VDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 118 ~~l~~~l~~~~----------------~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.|+..+...++ ..+++++||||||.++..++...
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 89888887776 24899999999999999999753
No 111
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.46 E-value=3.3e-11 Score=96.02 Aligned_cols=219 Identities=15% Similarity=0.088 Sum_probs=124.1
Q ss_pred CCCCeEEEEcCCCC-----CccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH------h
Q 020916 61 PSKPVVVLVHGFAA-----EGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK------L 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~-----~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~------~ 127 (320)
...|.||++||.|. ... .|..+...++.. ..|+++|+|=--+.. -+-..++-.+.+..+.++ .
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~-~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSP-AYDSFCTRLAAELNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCc-hhHHHHHHHHHHcCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHHHhCC
Confidence 46799999999873 234 788888888776 889999998332222 223444444555555543 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC------ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHh
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS 201 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
+.++++|+|-|.||.+|..+|.+. +-++++.|++-|................... ..........++
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~------~~~~~~~~~~~w- 236 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS------PELARPKIDKWW- 236 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC------cchhHHHHHHHH-
Confidence 567899999999999999998653 3468999999998765443322111111000 000011111111
Q ss_pred HhhhccccCCchhHHHHHHHHhcChh--hHHHHhhhhhccCCCCCCCCCCC-cEEEEecCCCCCCCHHHHHHHHHHhCC-
Q 020916 202 VATYKKLWFPSCLYKDFLEVMFANRK--ERAELLEGLLISNKDPTVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLGA- 277 (320)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~- 277 (320)
.....+.. ....+...... ..........+ |++++.++.|.+. +....+.+++.+
T Consensus 237 ------------------~~~lP~~~~~~~~p~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 237 ------------------RLLLPNGKTDLDHPFINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKA 295 (336)
T ss_pred ------------------HHhCCCCCCCcCCcccccccc-ccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHc
Confidence 11100000 00011111110 11112223344 4999999999885 444555555542
Q ss_pred -CCeEEEEecCCCcccccCC-----hHHHHHHHHHHHHhh
Q 020916 278 -DHVTFQGIKKAGHLVHLER-----PCAYNRCLKQFLASL 311 (320)
Q Consensus 278 -~~~~~~~~~~~gH~~~~~~-----~~~~~~~i~~fl~~~ 311 (320)
..+++..++++.|.++.-. ..++.+.+.+|+++.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 3456667899999877533 356777777887653
No 112
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.44 E-value=8.1e-12 Score=98.09 Aligned_cols=231 Identities=17% Similarity=0.187 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCCCCCccccHH-HH-HHHhhcc-ceEEecCCCCCCCCCCCCCC----CChhHH----------HHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ-FQ-VGALTKK-YSVYIPDLLFFGGSITDEAD----RSPTFQ----------AQCLATG 123 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~-~~-~~~l~~~-~~vi~~d~~G~G~s~~~~~~----~~~~~~----------~~~l~~~ 123 (320)
+.+|.+|.++|.|.+.. ..+ .+ +..|.+. +..+.+..|-||...+.... .+..++ +..+..+
T Consensus 90 ~~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 46889999999998765 332 23 4555555 99999999999987654321 222222 2334444
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHh
Q 020916 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 124 l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
++..+..++.+.|.||||.+|...|...|..+..+-.+++........ ...+... -.+..+.+-+...
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt-~Gvls~~-----------i~W~~L~~q~~~~ 236 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT-EGVLSNS-----------INWDALEKQFEDT 236 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh-hhhhhcC-----------CCHHHHHHHhccc
Confidence 555588899999999999999999999998766655555443211100 0000000 0000000000000
Q ss_pred hhcc--ccCCchhHHHHH--HHHhcChhhHHHHhhhhhccCCCCCCCCCC-----CcEEEEecCCCCCCCHHHHHHHHHH
Q 020916 204 TYKK--LWFPSCLYKDFL--EVMFANRKERAELLEGLLISNKDPTVPNFP-----QRVHLLWGEDDQIFNVELAHNMKEQ 274 (320)
Q Consensus 204 ~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~~~~~ 274 (320)
.+.. ...+........ ............+...+. +....+.++. -.+.++.+++|.++|.+....+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~m--d~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 237 VYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVM--DSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred chhhhhcccccCcccccchhhccccchHHHHHHHHHHH--HhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHh
Confidence 0000 000000000000 000000011111111111 1111222222 2378999999999999999999999
Q ss_pred hCCCCeEEEEecCCCccc-ccCChHHHHHHHHHHHH
Q 020916 275 LGADHVTFQGIKKAGHLV-HLERPCAYNRCLKQFLA 309 (320)
Q Consensus 275 ~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 309 (320)
+| ++++..++| ||.. ++-+.+.+.+.|.+-++
T Consensus 315 WP--GsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 315 WP--GSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CC--CCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99 999999987 9974 45677888888887664
No 113
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.43 E-value=2.4e-11 Score=93.01 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=86.2
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChhHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYGGM 142 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~Gg~ 142 (320)
|+++|+|+.++... .|..+...|.....|+.++.||.|.- .....+++++++...+.|..+. ..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 57999999999999 99999999999999999999999862 2345688899888888887775 46899999999999
Q ss_pred HHHHHHHhC---ccccccEEEeccccc
Q 020916 143 VSFKVAELY---PNLVQAMVVSGSILA 166 (320)
Q Consensus 143 ~a~~~a~~~---p~~v~~lvl~~~~~~ 166 (320)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999763 446999999999876
No 114
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.42 E-value=3.3e-12 Score=101.63 Aligned_cols=224 Identities=15% Similarity=0.130 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHH-----HHHHHHHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQA-----QCLATGLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~-----~~l~~~l~~~~~~ 130 (320)
-+++++++|.+-.... .| ..++..|.++ +.|+.+++++-..+.. ..++++++ +.+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5679999999876554 44 3467778777 9999999987655543 34555554 4444455556778
Q ss_pred cEEEEEeChhHHHHHHHHHhCccc-cccEEEecccccccccccccccccc------cccccccccCcCcH-H--------
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNL-VQAMVVSGSILAMTDSINETNLNRL------GVSSSSELLLPNSV-K-------- 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~-------- 194 (320)
++.++|+|.||.++..+++.++.+ |++++++.+...+........+... ..........+... .
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999988887 9999999888765443221111111 00000000000000 0
Q ss_pred ---HHHHHHhHhhhccccC--------------CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 195 ---GLKALLSVATYKKLWF--------------PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 195 ---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
....+........... +......+++..+....... ..+......-++.+|+||++.+.|
T Consensus 262 ndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~---g~~~v~G~~VdL~~It~pvy~~a~ 338 (445)
T COG3243 262 NDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIR---GGLEVSGTMVDLGDITCPVYNLAA 338 (445)
T ss_pred cccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhc---cceEECCEEechhhcccceEEEee
Confidence 0001111111111111 11112222222111110000 111112233578889999999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
++|.++|.+......+.++ ..++++.. ++||....
T Consensus 339 ~~DhI~P~~Sv~~g~~l~~-g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 339 EEDHIAPWSSVYLGARLLG-GEVTFVLS-RSGHIAGV 373 (445)
T ss_pred cccccCCHHHHHHHHHhcC-CceEEEEe-cCceEEEE
Confidence 9999999999999998888 34666666 57998654
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=9.1e-12 Score=94.58 Aligned_cols=104 Identities=28% Similarity=0.355 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH-H------hCCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA-K------LGVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~-~------~~~~~~ 132 (320)
+.-|+|||+||+..... .|..++++++.+ |-|+++|+...+..............++.+.+-++ . .+..++
T Consensus 15 g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l 93 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKL 93 (259)
T ss_pred CCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccce
Confidence 57899999999997777 899999999999 99999996654332111111111111121111111 1 134589
Q ss_pred EEEEeChhHHHHHHHHHhC-----ccccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY-----PNLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 165 (320)
.|.|||-||-+|..++..+ +.+++++++++|.-
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 9999999999999999887 45899999999875
No 116
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.42 E-value=2e-10 Score=84.72 Aligned_cols=245 Identities=12% Similarity=0.037 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc----ceEEecCCCCCCCCC---CC------CCCCChhHHHHHHHHHHHHh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK----YSVYIPDLLFFGGSI---TD------EADRSPTFQAQCLATGLAKL 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~----~~vi~~d~~G~G~s~---~~------~~~~~~~~~~~~l~~~l~~~ 127 (320)
.+++.|++++|.++... .|..++..|-.. +.++.+...||-.-+ .. .+.++++++++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 47889999999999999 999988877654 458888888886544 11 13377888888888888766
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEeccccccccccc-ccccccc-c----cccccc-ccCcCcHHHH
Q 020916 128 G--VDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAMTDSIN-ETNLNRL-G----VSSSSE-LLLPNSVKGL 196 (320)
Q Consensus 128 ~--~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~-~~~~~~~-~----~~~~~~-~~~~~~~~~~ 196 (320)
- ..+++++|||-|+++.+.++..... .|.+++++-|......... ...+... . ...... ..........
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3 3579999999999999999874322 5788888777653211111 1111100 0 000011 1122222333
Q ss_pred HHHHhHhhhccccCCchhHHHHHHHHh----cChh-hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHH
Q 020916 197 KALLSVATYKKLWFPSCLYKDFLEVMF----ANRK-ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNM 271 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 271 (320)
+.++..........+.+.....+...- ++.- ...+-+..... .....+.+-.+-+.+.+|..|..+|.+....+
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~ 264 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYY 264 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-hHHHHHHhcCcEEEEEccCCCCCcchHHHHHH
Confidence 334333333333334443322111100 0000 00000000000 00011222234588999999999999999999
Q ss_pred HHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 272 KEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 272 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.+.++..++++-+ ++..|.+...+.+..+..+.+.+
T Consensus 265 kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 265 KDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred hhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 9999966677766 78999999998888888887765
No 117
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.39 E-value=1.4e-10 Score=97.82 Aligned_cols=127 Identities=17% Similarity=0.179 Sum_probs=87.1
Q ss_pred eEEEcCC---CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH---------------
Q 020916 24 HAVEIEP---GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG--------------- 85 (320)
Q Consensus 24 ~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~--------------- 85 (320)
.++.+++ +..|.||...... ...+.|+||+++|.++.+. .+..+.+
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~---------------~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~ 113 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRN---------------GNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYN 113 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCC---------------CCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeE
Confidence 3455532 4567777665421 1246799999999999887 5533321
Q ss_pred ---HhhccceEEecCCC-CCCCCCCCCC--CCChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 86 ---ALTKKYSVYIPDLL-FFGGSITDEA--DRSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 86 ---~l~~~~~vi~~d~~-G~G~s~~~~~--~~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.+.+..+++.+|.| |+|.|..... ..+.++.++|+.++++.. +..+++|+|||+||.++..+|.+.-
T Consensus 114 n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 114 NTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred CCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 12334789999975 8888875433 245567788888888743 3478999999999999988886521
Q ss_pred ----------cccccEEEeccccc
Q 020916 153 ----------NLVQAMVVSGSILA 166 (320)
Q Consensus 153 ----------~~v~~lvl~~~~~~ 166 (320)
-.++|+++.++...
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred hhccccCCceeeeEEEEEeccccC
Confidence 13788888887654
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.39 E-value=3e-11 Score=107.59 Aligned_cols=219 Identities=12% Similarity=0.051 Sum_probs=122.1
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--------------------CCcEEEEEeChhH
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--------------------VDKCVLVGFSYGG 141 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--------------------~~~~~lvGhS~Gg 141 (320)
+.+.|..+ |.|+..|.||.|.|......... ...+|..++|+.+. .++|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 44667777 99999999999999876433333 34566666776664 3689999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc-ccc-CCchhHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLW-FPSCLYKDFL 219 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 219 (320)
.+++.+|...|+.++++|..++........... +...............+.......... ..+ ......+...
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~-----G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYREN-----GLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcC-----CceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHH
Confidence 999999998888899999877664321111000 000000000000011011110000000 000 0001111111
Q ss_pred HHHhc----ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccc
Q 020916 220 EVMFA----NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 220 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
..+.. .......++ ...+....+.++++|+|+|+|..|..+++..+.++.+.+. +...++.+.+ .+|...
T Consensus 425 ~~~~~~~~~~~~~y~~fW---~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~ 500 (767)
T PRK05371 425 AELTAAQDRKTGDYNDFW---DDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYP 500 (767)
T ss_pred hhhhhhhhhcCCCccHHH---HhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCC
Confidence 11000 000001111 1112224567899999999999999999888777777764 1346666555 488654
Q ss_pred c-CChHHHHHHHHHHHHhh
Q 020916 294 L-ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 294 ~-~~~~~~~~~i~~fl~~~ 311 (320)
. ..+.++.+.+.+|++..
T Consensus 501 ~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 501 NNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CchhHHHHHHHHHHHHHhc
Confidence 3 34567777888888665
No 119
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.37 E-value=9.8e-12 Score=94.32 Aligned_cols=161 Identities=17% Similarity=0.160 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHH----HHhhc-cceEEecCCCC-----CCCCCC------------CC-----------
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQV----GALTK-KYSVYIPDLLF-----FGGSIT------------DE----------- 108 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~----~~l~~-~~~vi~~d~~G-----~G~s~~------------~~----------- 108 (320)
.++.||||||++.++. .++... ..|.+ .+..+.+|-|- -|-... +.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 5789999999999999 887654 45555 57788877542 111100 00
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc--------cccccEEEeccccccccccccccccccc
Q 020916 109 ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP--------NLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 109 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--------~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
....+++..+.+.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 012234445566666666552 3579999999999998885421 236778888766521110
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCC
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDD 260 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 260 (320)
+... ..-..+++|+|.|+|.+|
T Consensus 151 ----------------------------------------------------~~~~------~~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 151 ----------------------------------------------------YQEL------YDEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------GTTT------T--TT---EEEEEEETT-
T ss_pred ----------------------------------------------------hhhh------hccccCCCCeEEEEeCCC
Confidence 0000 023567899999999999
Q ss_pred CCCCHHHHHHHHHHhCCCC-eEEEEecCCCcccccC
Q 020916 261 QIFNVELAHNMKEQLGADH-VTFQGIKKAGHLVHLE 295 (320)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 295 (320)
.+++++..+.+.+.+. + .+++..++ ||.+...
T Consensus 173 ~~~~~~~s~~L~~~~~--~~~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 173 PVVPPERSEALAEMFD--PDARVIEHDG-GHHVPRK 205 (212)
T ss_dssp SSS-HHHHHHHHHHHH--HHEEEEEESS-SSS----
T ss_pred CCcchHHHHHHHHhcc--CCcEEEEECC-CCcCcCC
Confidence 9999999999999987 5 77777765 9988755
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.37 E-value=1.5e-11 Score=97.51 Aligned_cols=123 Identities=19% Similarity=0.203 Sum_probs=81.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH---H------HHhhcc-ceEEecCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ---V------GALTKK-YSVYIPDLL 99 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~------~~l~~~-~~vi~~d~~ 99 (320)
||++|+..++.| ... ..++.|+||..|+++.+........ . ..|.++ |.|+..|.|
T Consensus 1 DGv~L~adv~~P-~~~-------------~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~R 66 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD-------------GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVR 66 (272)
T ss_dssp TS-EEEEEEEEE---T-------------TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-T
T ss_pred CCCEEEEEEEec-CCC-------------CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCc
Confidence 688888866655 111 2246789999999996542011111 1 126666 999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
|.|.|....... ....++|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 67 G~g~S~G~~~~~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 67 GTGGSEGEFDPM-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp TSTTS-S-B-TT-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred ccccCCCccccC-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 999998765443 4445677777776662 247999999999999999999888889999988776543
No 121
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.36 E-value=7e-11 Score=95.76 Aligned_cols=104 Identities=22% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH---hC--CC
Q 020916 61 PSKPVVVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK---LG--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~---~~--~~ 130 (320)
...|+||++||.+. +.. ....++..+.. . +.|+.+|+|---+-. -...+++..+.+..+.++ ++ .+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 46899999999874 333 44345544444 4 999999999432221 122333333333333333 23 56
Q ss_pred cEEEEEeChhHHHHHHHHHhCcc----ccccEEEeccccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMT 168 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~ 168 (320)
++.++|+|.||.+++.++..-.+ .....+++.|.....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 79999999999999999876543 467888888876543
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.35 E-value=2.3e-11 Score=86.96 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=110.0
Q ss_pred CCCCCeEEEEcCCC---CCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHH----HHHHHHHHHHhC-CCc
Q 020916 60 KPSKPVVVLVHGFA---AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ----AQCLATGLAKLG-VDK 131 (320)
Q Consensus 60 ~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~l~~~l~~~~-~~~ 131 (320)
+...+..||+||.- ++...+....-..+...|+|..+++ +.+.. ..+++.. ..-+.-+++... .+.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q---~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ---VHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc---cccHHHHHHHHHHHHHHHHHhccccee
Confidence 35789999999963 2222133333445555588888754 44432 2344443 344444455544 345
Q ss_pred EEEEEeChhHHHHHHHHHh-CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 132 CVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+.+-|||.|+.+|..+..+ +..+|.++++.++......-........+ .+
T Consensus 138 l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl-----------------------------gL 188 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL-----------------------------GL 188 (270)
T ss_pred EEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc-----------------------------Cc
Confidence 6677999999999988765 34589999998887632111000000000 00
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 290 (320)
.. +-.+. .. -....+..++.|+|++.|++|...-.++.+.+...+. .+.+..+++.+|
T Consensus 189 t~----~~ae~-----------~S-----cdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~--~a~~~~f~n~~h 246 (270)
T KOG4627|consen 189 TE----RNAES-----------VS-----CDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR--KASFTLFKNYDH 246 (270)
T ss_pred cc----chhhh-----------cC-----ccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh--hcceeecCCcch
Confidence 00 00000 00 0002346678899999999998777888999999988 899999999999
Q ss_pred ccccCCh
Q 020916 291 LVHLERP 297 (320)
Q Consensus 291 ~~~~~~~ 297 (320)
+-.+++.
T Consensus 247 y~I~~~~ 253 (270)
T KOG4627|consen 247 YDIIEET 253 (270)
T ss_pred hhHHHHh
Confidence 9776543
No 123
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.34 E-value=3.8e-11 Score=92.25 Aligned_cols=202 Identities=20% Similarity=0.220 Sum_probs=116.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhh-cc---ceEEec--CCCCC----CCC----CCCC------CC--CChhHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALT-KK---YSVYIP--DLLFF----GGS----ITDE------AD--RSPTFQAQC 119 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~-~~---~~vi~~--d~~G~----G~s----~~~~------~~--~~~~~~~~~ 119 (320)
...|.||+||++++.. .+..++..+. +. -.++.+ +.-|. |.= ..|- .. .+....++.
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 5678999999999999 9999999997 43 333333 33331 211 1110 11 245567778
Q ss_pred HHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEecccccccccccccccccccccccccccCc
Q 020916 120 LATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLP 190 (320)
Q Consensus 120 l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+..++..| +++++-+|||||||..++.++..+.. .+..+|.++++.............. . +
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~----~----~-- 158 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQN----D----L-- 158 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT---------C--
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhh----h----h--
Confidence 88887776 57899999999999999999987532 5899999998875432211100000 0 0
Q ss_pred CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC------CCCCCC
Q 020916 191 NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE------DDQIFN 264 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~ 264 (320)
.... |.. .....+.+... . .. .++ -++.+|-|.|. .|..||
T Consensus 159 ---------------~~~g-p~~-~~~~y~~l~~~----------~-~~----~~p-~~i~VLnI~G~~~~g~~sDG~V~ 205 (255)
T PF06028_consen 159 ---------------NKNG-PKS-MTPMYQDLLKN----------R-RK----NFP-KNIQVLNIYGDLEDGSNSDGIVP 205 (255)
T ss_dssp ---------------STT--BSS---HHHHHHHHT----------H-GG----GST-TT-EEEEEEEESBTTCSBTSSSB
T ss_pred ---------------cccC-Ccc-cCHHHHHHHHH----------H-Hh----hCC-CCeEEEEEecccCCCCCCCeEEe
Confidence 0000 000 01111111100 0 00 111 13459999998 789999
Q ss_pred HHHHHHHHHHhCC--CCeEEEEecC--CCcccccCChHHHHHHHHHHH
Q 020916 265 VELAHNMKEQLGA--DHVTFQGIKK--AGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 265 ~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 308 (320)
...+..+...+.. ...+-.++.| +.|.-..+++ ++.+.|.+||
T Consensus 206 ~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 206 NASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 9988887777752 2455566654 6898888877 4778999887
No 124
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.34 E-value=5.7e-11 Score=86.34 Aligned_cols=175 Identities=18% Similarity=0.182 Sum_probs=117.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCC-CCCCCCC-CC-------CCCChhHHHHHHHHHHHHh---C
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLL-FFGGSIT-DE-------ADRSPTFQAQCLATGLAKL---G 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~-G~G~s~~-~~-------~~~~~~~~~~~l~~~l~~~---~ 128 (320)
++..||++--+.+.....-+..+..++.+ |.|+.||+- |--.|.. .. ...+....-.++..+++.+ +
T Consensus 38 ~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 34566666665554442467788888888 999999974 3111111 00 1122333345555555544 4
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 129 -VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 129 -~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
..++.++|.+|||.++..+....| .+.+++..-|....
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d---------------------------------------- 156 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD---------------------------------------- 156 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC----------------------------------------
Confidence 567999999999999999988877 57777766654310
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC---CCCeEEEE
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG---ADHVTFQG 284 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~ 284 (320)
......+++|++++.|+.|..+|+.....+.+.+. ....++.+
T Consensus 157 ----------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~ 202 (242)
T KOG3043|consen 157 ----------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKT 202 (242)
T ss_pred ----------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEE
Confidence 01356778999999999999999999888888876 22346999
Q ss_pred ecCCCccccc-----CCh------HHHHHHHHHHHHhh
Q 020916 285 IKKAGHLVHL-----ERP------CAYNRCLKQFLASL 311 (320)
Q Consensus 285 ~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 311 (320)
++|.+|.+.. +.| |+..+.+.+|+++.
T Consensus 203 f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 203 FSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 9999998763 233 45566666777654
No 125
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.32 E-value=1.7e-10 Score=83.88 Aligned_cols=176 Identities=19% Similarity=0.202 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHH----HHhhccceEEecCCCC----CCCCC---------CCC----------------
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQV----GALTKKYSVYIPDLLF----FGGSI---------TDE---------------- 108 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~----~~l~~~~~vi~~d~~G----~G~s~---------~~~---------------- 108 (320)
.++.|||+||+-.+.. .|..-. ..|.+.+..+.+|-|- -+.+. .+.
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 5788999999999888 775433 3344447777777662 01110 000
Q ss_pred -CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCc------c--ccccEEEeccccccccccccccccc
Q 020916 109 -ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYP------N--LVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 109 -~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p------~--~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
.....+...+.+.+.+...| | -.|+|.|.|+.++..++.... + .++-+|++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 00122333455555555554 4 468999999999999987211 1 24555555544311000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
.......+.+++|.|-|.|+
T Consensus 153 ------------------------------------------------------------~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 153 ------------------------------------------------------------LDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred ------------------------------------------------------------hhhhhhccCCCCCeeEEecc
Confidence 00001346789999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.|.++|...+..+++.+. +..+..-+ +||++.... ...+.|.+|+.....
T Consensus 173 ~D~iv~~~~s~~L~~~~~--~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESFK--DATVLEHP-GGHIVPNKA--KYKEKIADFIQSFLQ 222 (230)
T ss_pred cceeecchHHHHHHHhcC--CCeEEecC-CCccCCCch--HHHHHHHHHHHHHHH
Confidence 999999999999999998 66655555 599987654 556666677666543
No 126
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.30 E-value=1e-10 Score=87.14 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=74.6
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHh-------C
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD---RSPTFQAQCLATGLAKL-------G 128 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~ 128 (320)
.+.-|.|+|+||+.-..+ .|..++.+++.+ |-|+++++-..-. +... .+....++.+..-++++ +
T Consensus 43 ~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred CCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 467799999999999888 999999999999 9999999874211 1111 12222233333333332 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCc--cccccEEEeccccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYP--NLVQAMVVSGSILA 166 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 166 (320)
..++.++|||.||-.|..+|..+. -.++++|.++|...
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 468999999999999999998763 25889999998753
No 127
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.30 E-value=2.7e-10 Score=85.58 Aligned_cols=103 Identities=22% Similarity=0.322 Sum_probs=67.5
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHhhcc--ceEEecCCCCCCCCCCC---------CCCCChhHHHHHHHHHHHHhC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGALTKK--YSVYIPDLLFFGGSITD---------EADRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~~~--~~vi~~d~~G~G~s~~~---------~~~~~~~~~~~~l~~~l~~~~ 128 (320)
+.|.||++||.+.+.. .+... ...|++. |-|+.++.......... ........++..+..+..+.+
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5689999999999887 65442 2456665 88888885421111100 001112222233333333433
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
..+|++.|+|.||.++..++..+|+.+.++...++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 4579999999999999999999999999988877665
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.27 E-value=5.5e-11 Score=90.53 Aligned_cols=102 Identities=20% Similarity=0.190 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhh--------c-cceEEecCCCCCCCCCCCCCCCChhH----HHHHHHHHHHHh-
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALT--------K-KYSVYIPDLLFFGGSITDEADRSPTF----QAQCLATGLAKL- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~--------~-~~~vi~~d~~G~G~s~~~~~~~~~~~----~~~~l~~~l~~~- 127 (320)
++.+||||||.+++.. .++.+...+. . .++++++|+......-. ...+.. ..+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhh
Confidence 6889999999999888 8877775552 1 27899999875422211 122223 333444444444
Q ss_pred ----CCCcEEEEEeChhHHHHHHHHHhCc---cccccEEEecccccc
Q 020916 128 ----GVDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSILAM 167 (320)
Q Consensus 128 ----~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 167 (320)
..++++||||||||.+|..++...+ +.|+.+|.++++...
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999998886543 479999999987643
No 129
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=6.3e-10 Score=99.07 Aligned_cols=231 Identities=19% Similarity=0.171 Sum_probs=146.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------ccHHHHHHHhhcc-c
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------VTWQFQVGALTKK-Y 91 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------~~~~~~~~~l~~~-~ 91 (320)
.-.+...+.. ||....+...-|+.-++. +.-|.+|.+||.+++.. ..|..+ ..... +
T Consensus 496 p~~~~~~i~~-~~~~~~~~~~lP~~~~~~-------------~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~ 559 (755)
T KOG2100|consen 496 PIVEFGKIEI-DGITANAILILPPNFDPS-------------KKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGF 559 (755)
T ss_pred CcceeEEEEe-ccEEEEEEEecCCCCCCC-------------CCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCe
Confidence 3456677777 899999977766443322 35688899999986322 133332 23444 9
Q ss_pred eEEecCCCCCCCCCCCC--------CCCChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccc-cccEEE
Q 020916 92 SVYIPDLLFFGGSITDE--------ADRSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNL-VQAMVV 160 (320)
Q Consensus 92 ~vi~~d~~G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl 160 (320)
.|+.+|.||-|.....- ......++...+..+++.. +.+++.++|+|.||.+++..+...|+. ++..+.
T Consensus 560 ~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgva 639 (755)
T KOG2100|consen 560 AVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVA 639 (755)
T ss_pred EEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEE
Confidence 99999999987665331 2234455555555555543 456899999999999999999998855 455588
Q ss_pred ecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccC
Q 020916 161 SGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (320)
++|.....-......... ...+......+.+ ..
T Consensus 640 vaPVtd~~~yds~~tery-----------------------------mg~p~~~~~~y~e------------------~~ 672 (755)
T KOG2100|consen 640 VAPVTDWLYYDSTYTERY-----------------------------MGLPSENDKGYEE------------------SS 672 (755)
T ss_pred ecceeeeeeecccccHhh-----------------------------cCCCccccchhhh------------------cc
Confidence 888764321000000000 0001110100111 11
Q ss_pred CCCCCCCCCCcE-EEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCCh-HHHHHHHHHHHHhhh
Q 020916 241 KDPTVPNFPQRV-HLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERP-CAYNRCLKQFLASLH 312 (320)
Q Consensus 241 ~~~~~~~~~~P~-l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~~ 312 (320)
....+..++.|. |++||+.|..+..+.+..+.+.+. +-..+..++|+.+|.+..-.. ..+...+..|+..+-
T Consensus 673 ~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 673 VSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred ccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 122344455555 999999999999998888888876 335788999999999887443 678888889988543
No 130
>PRK04940 hypothetical protein; Provisional
Probab=99.26 E-value=1.7e-09 Score=77.61 Aligned_cols=169 Identities=11% Similarity=0.162 Sum_probs=94.8
Q ss_pred EEEEcCCCCCcccc--HHH-HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-C---CCcEEEEEeC
Q 020916 66 VVLVHGFAAEGIVT--WQF-QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-G---VDKCVLVGFS 138 (320)
Q Consensus 66 vv~lhG~~~~~~~~--~~~-~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~---~~~~~lvGhS 138 (320)
||++||+.+++. + ... ....+....+++ +++ ........+.+.+.+..+ . .+++.|||+|
T Consensus 2 IlYlHGF~SS~~-S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSP-GNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCC-ccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 799999999888 5 321 111221113333 221 123333344444554431 1 2579999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF 218 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
+||..|..++.++. -..|+++|...+... +...+. ...... .+....
T Consensus 69 LGGyyA~~La~~~g---~~aVLiNPAv~P~~~-------------------------L~~~ig----~~~~y~-~~~~~h 115 (180)
T PRK04940 69 LGGYWAERIGFLCG---IRQVIFNPNLFPEEN-------------------------MEGKID----RPEEYA-DIATKC 115 (180)
T ss_pred hHHHHHHHHHHHHC---CCEEEECCCCChHHH-------------------------HHHHhC----CCcchh-hhhHHH
Confidence 99999999999986 367888988743211 000000 000000 111111
Q ss_pred HHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe-EEEEecCCCcccccCCh
Q 020916 219 LEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV-TFQGIKKAGHLVHLERP 297 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 297 (320)
+... . .+-.-..+++..+.|.+.+...+..... ++ +..+.+|++|-+ ++-
T Consensus 116 ~~eL--------------~--------~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGdH~f--~~f 166 (180)
T PRK04940 116 VTNF--------------R--------EKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQTHKF--KNI 166 (180)
T ss_pred HHHh--------------h--------hcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCCCCC--CCH
Confidence 1111 0 0112236899999999998877665443 44 688888888864 345
Q ss_pred HHHHHHHHHHHH
Q 020916 298 CAYNRCLKQFLA 309 (320)
Q Consensus 298 ~~~~~~i~~fl~ 309 (320)
++....|.+|++
T Consensus 167 e~~l~~I~~F~~ 178 (180)
T PRK04940 167 SPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHHHHHHh
Confidence 667778888874
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.24 E-value=3.6e-10 Score=81.74 Aligned_cols=176 Identities=19% Similarity=0.251 Sum_probs=113.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCC------------------CCCCCChhHHHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT------------------DEADRSPTFQAQCLAT 122 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~------------------~~~~~~~~~~~~~l~~ 122 (320)
...+||++||.+.+.. .|..+++.|.-. ...|++.-|-.-.+.. +.........++.+..
T Consensus 2 h~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred ceEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 3468999999999999 999888887766 7778775542211110 0011223334556666
Q ss_pred HHHHh---C--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHH
Q 020916 123 GLAKL---G--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLK 197 (320)
Q Consensus 123 ~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
++++. + ..++.+-|.|+||.+++..+..+|..+.+++-..+.........
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~------------------------- 135 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL------------------------- 135 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc-------------------------
Confidence 66654 2 34689999999999999999999877777776555432110000
Q ss_pred HHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC-
Q 020916 198 ALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG- 276 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~- 276 (320)
... ..... ..|++..||+.|+++|....+...+.+.
T Consensus 136 ------------------------------------~~~-----~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~ 172 (206)
T KOG2112|consen 136 ------------------------------------PGW-----LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKS 172 (206)
T ss_pred ------------------------------------cCC-----ccccC--cchhheecccCCceeehHHHHHHHHHHHH
Confidence 000 00001 5689999999999999876555544443
Q ss_pred -CCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 277 -ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 277 -~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
...++++.++|.+|...-+.-+ .+..|+.+
T Consensus 173 ~~~~~~f~~y~g~~h~~~~~e~~----~~~~~~~~ 203 (206)
T KOG2112|consen 173 LGVRVTFKPYPGLGHSTSPQELD----DLKSWIKT 203 (206)
T ss_pred cCCceeeeecCCccccccHHHHH----HHHHHHHH
Confidence 1258899999999987644333 44455544
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.19 E-value=3.2e-10 Score=93.08 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCC-CCC--C------C---------------CC-C--
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS-ITD--E------A---------------DR-S-- 112 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s-~~~--~------~---------------~~-~-- 112 (320)
+.-|+|||-||++++.. .|..++..|+.+ |-|+++|+|..-.+ ... . . .. .
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 36799999999999999 999999999999 99999999943111 000 0 0 00 0
Q ss_pred --------hhHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCccccccE
Q 020916 113 --------PTFQAQCLATGLAKL--------------------------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158 (320)
Q Consensus 113 --------~~~~~~~l~~~l~~~--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 158 (320)
++..++++..+++.+ +.+++.++|||+||..++..+... .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 001133444444332 134799999999999999988876 679999
Q ss_pred EEecccc
Q 020916 159 VVSGSIL 165 (320)
Q Consensus 159 vl~~~~~ 165 (320)
|++++..
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999875
No 133
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.16 E-value=1.5e-09 Score=82.90 Aligned_cols=95 Identities=22% Similarity=0.142 Sum_probs=70.6
Q ss_pred EEcCCC--CCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEEEEeChhHHHH
Q 020916 68 LVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-LGVDKCVLVGFSYGGMVS 144 (320)
Q Consensus 68 ~lhG~~--~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~lvGhS~Gg~~a 144 (320)
++|+.+ ++.. .|..+...|...+.|++++.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 455544 4556 89999999988899999999999876533 34566666655554443 345689999999999999
Q ss_pred HHHHHh---CccccccEEEecccc
Q 020916 145 FKVAEL---YPNLVQAMVVSGSIL 165 (320)
Q Consensus 145 ~~~a~~---~p~~v~~lvl~~~~~ 165 (320)
..++.+ .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 998876 345688998887654
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.14 E-value=7.6e-10 Score=79.52 Aligned_cols=96 Identities=25% Similarity=0.219 Sum_probs=74.5
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeC
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFS 138 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS 138 (320)
..+||+-|=++-.. .=..+++.|+++ +.|+.+|-+-+=.+ ..+.++.+.|+..++++. +.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~-----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS-----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh-----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 35777777766555 556788999998 99999997644333 356778888888888665 56789999999
Q ss_pred hhHHHHHHHHHhCcc----ccccEEEecccc
Q 020916 139 YGGMVSFKVAELYPN----LVQAMVVSGSIL 165 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 165 (320)
+|+-+.-....+.|. +|+.++|+++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999988888877764 688999998765
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.13 E-value=4e-10 Score=85.35 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=64.0
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
+++.|+|.|.||-+|+.+|..+| .|+++|.+++....................... .... .....
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~-----~~~~-------~~~~~-- 86 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPF-----DISK-------FSWNE-- 86 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B------GGG--------EE-T--
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCc-----Chhh-------ceecC--
Confidence 58999999999999999999998 699999999876543322111100000000000 0000 00000
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhC----CCCeEEEE
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLG----ADHVTFQG 284 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~----~~~~~~~~ 284 (320)
+. ....... ......-......-.+.++++|+|+|.|++|...|... ++.+.+++. ..+.+++.
T Consensus 87 -~~---------~~~~~~~-~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~ 155 (213)
T PF08840_consen 87 -PG---------LLRSRYA-FELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLS 155 (213)
T ss_dssp -TS----------EE-TT--B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEE
T ss_pred -Cc---------ceehhhh-hhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEE
Confidence 00 0000000 00000000011123466789999999999999998755 344444443 12578899
Q ss_pred ecCCCcccc
Q 020916 285 IKKAGHLVH 293 (320)
Q Consensus 285 ~~~~gH~~~ 293 (320)
++++||++.
T Consensus 156 Y~~aGH~i~ 164 (213)
T PF08840_consen 156 YPGAGHLIE 164 (213)
T ss_dssp ETTB-S---
T ss_pred cCCCCceec
Confidence 999999853
No 136
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.13 E-value=1.5e-08 Score=83.21 Aligned_cols=82 Identities=23% Similarity=0.261 Sum_probs=61.8
Q ss_pred HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCcccccc
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
+...|...+.|+.+.+. ..+.+..++.+.......+++.+ +..+++|+|.|.||..++.+|+.+|+.+.-
T Consensus 93 vG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 45567767777776654 23445568888777666666655 234899999999999999999999999999
Q ss_pred EEEecccccccc
Q 020916 158 MVVSGSILAMTD 169 (320)
Q Consensus 158 lvl~~~~~~~~~ 169 (320)
+|+.+++.....
T Consensus 168 lvlaGaPlsywa 179 (581)
T PF11339_consen 168 LVLAGAPLSYWA 179 (581)
T ss_pred eeecCCCccccc
Confidence 999888876544
No 137
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.11 E-value=1.3e-08 Score=79.38 Aligned_cols=87 Identities=15% Similarity=0.076 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCCCCCccccH------HHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----
Q 020916 61 PSKPVVVLVHGFAAEGIVTW------QFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG---- 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~------~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~---- 128 (320)
.+...||++-|.++.-+ .. ...+..+++. .+|+.+++||.|.|.... +.++++.|-.+.++++.
T Consensus 135 ~~~RWiL~s~GNg~~~E-~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYE-NRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhh-hhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---CHHHHHHHHHHHHHHHHhccc
Confidence 47789999999887655 31 1223444444 899999999999998765 45788887777777662
Q ss_pred ---CCcEEEEEeChhHHHHHHHHHhC
Q 020916 129 ---VDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 129 ---~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+++++.|||+||.++..++..+
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 25799999999999999877664
No 138
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.09 E-value=9.8e-10 Score=87.52 Aligned_cols=104 Identities=28% Similarity=0.294 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCCccc---c----------H----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCC-----CChhHH-
Q 020916 61 PSKPVVVLVHGFAAEGIV---T----------W----QFQVGALTKK-YSVYIPDLLFFGGSITDEAD-----RSPTFQ- 116 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~---~----------~----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-----~~~~~~- 116 (320)
++-|.||++||-++.... . + ..+...|+++ |-|+++|.+|+|+....... ++.+.+
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 567899999997765420 0 1 1246778888 99999999999998654311 111121
Q ss_pred --------------HHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 117 --------------AQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 117 --------------~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+-|....++.+ +.++|.++|+||||..++.+++.. ++|++.|..+...
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 22333455555 345799999999999999999886 5798888776544
No 139
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=6.7e-09 Score=86.93 Aligned_cols=227 Identities=17% Similarity=0.157 Sum_probs=135.4
Q ss_pred EcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHH--HHHhhcc-ceEEecCCC
Q 020916 27 EIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQ--VGALTKK-YSVYIPDLL 99 (320)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~--~~~l~~~-~~vi~~d~~ 99 (320)
....|.++..-++.+..-. .-++-|+++++-|.++-.- ..+... ...|+.. |-|+.+|-|
T Consensus 619 qs~tg~~lYgmiyKPhn~~-------------pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR 685 (867)
T KOG2281|consen 619 QSKTGLTLYGMIYKPHNFQ-------------PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNR 685 (867)
T ss_pred ecCCCcEEEEEEEccccCC-------------CCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCC
Confidence 4444666655555543222 1135689999999886322 022222 2345555 999999999
Q ss_pred CCCCCCCCC--------CCCChhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 100 FFGGSITDE--------ADRSPTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 100 G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
|.-...... ..-..+++++.+.-+.++.+ .+++.+-|||+||.+++....++|+-++..|.-+|... +
T Consensus 686 GS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~-W 764 (867)
T KOG2281|consen 686 GSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD-W 764 (867)
T ss_pred CccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCccee-e
Confidence 854433211 23467778888888888764 57899999999999999999999986665554443321 1
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
......... +-...|+..-..|.. ....... ..++.-
T Consensus 765 ~~YDTgYTE----------------------------RYMg~P~~nE~gY~a------gSV~~~V---------eklpde 801 (867)
T KOG2281|consen 765 RLYDTGYTE----------------------------RYMGYPDNNEHGYGA------GSVAGHV---------EKLPDE 801 (867)
T ss_pred eeecccchh----------------------------hhcCCCccchhcccc------hhHHHHH---------hhCCCC
Confidence 100000000 000011000000000 0000111 234444
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHh
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 310 (320)
....|++||--|..+-......+...+- ++..+++++|+-.|.+-. +...-+...+..|+++
T Consensus 802 pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 802 PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 4558999999999988777666665553 346799999999998864 4446677778888875
No 140
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.06 E-value=6e-08 Score=82.22 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=85.7
Q ss_pred eEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH----------------
Q 020916 24 HAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG---------------- 85 (320)
Q Consensus 24 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~---------------- 85 (320)
.++++. .+..|.||....... ..+.|.||++.|.++++. .+..+.+
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~---------------~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~ 77 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRND---------------PEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLED 77 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSG---------------GCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE
T ss_pred EEEecCCCCCcEEEEEEEEeCCC---------------CCCccEEEEecCCceecc-ccccccccCceEEeecccccccc
Confidence 356665 678899988765331 247899999999999988 7755432
Q ss_pred ---HhhccceEEecCCC-CCCCCCCCCCC---CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh-
Q 020916 86 ---ALTKKYSVYIPDLL-FFGGSITDEAD---RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAEL- 150 (320)
Q Consensus 86 ---~l~~~~~vi~~d~~-G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~- 150 (320)
.+.+..+++.+|.| |.|.|...... .+.+..++++..+|+.. ...+++|.|-|+||..+-.+|..
T Consensus 78 n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 78 NPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp -TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred cccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 12233789999955 89999765543 46777888888888754 34589999999999988777743
Q ss_pred ---C------ccccccEEEecccccc
Q 020916 151 ---Y------PNLVQAMVVSGSILAM 167 (320)
Q Consensus 151 ---~------p~~v~~lvl~~~~~~~ 167 (320)
. +-.++|+++.++....
T Consensus 158 ~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 158 LQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhccccccccccccccceecCccccc
Confidence 2 2347899998887654
No 141
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.99 E-value=8.2e-10 Score=87.32 Aligned_cols=206 Identities=18% Similarity=0.136 Sum_probs=113.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC--CCCCCCCCC---CC---hhHHHHHHHHHHHHh-----
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF--GGSITDEAD---RS---PTFQAQCLATGLAKL----- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~--G~s~~~~~~---~~---~~~~~~~l~~~l~~~----- 127 (320)
..|.||+-||.++... .|..+++.|++. |-|.++|.+|- |........ +. +.+...|+..+|+.+
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 6799999999999988 999999999999 99999999983 333221111 11 112234444444333
Q ss_pred --------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccc--ccccccc-cccccccccccccccccCcCcHHHH
Q 020916 128 --------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI--LAMTDSI-NETNLNRLGVSSSSELLLPNSVKGL 196 (320)
Q Consensus 128 --------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+..+|.++|||+||..+++.+....+......-+... ....... ....+...
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~----------------- 211 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQC----------------- 211 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccc-----------------
Confidence 3458999999999999999986654321111101100 0000000 00000000
Q ss_pred HHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHH--hhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHH
Q 020916 197 KALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL--LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKE 273 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~ 273 (320)
...+.+ ......++......+ ...+...--...+.+++.|++++.|..|.+.|... ......
T Consensus 212 ---------~av~~~------~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~ 276 (365)
T COG4188 212 ---------AAVWLP------RQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFG 276 (365)
T ss_pred ---------cccccc------hhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccc
Confidence 000000 000000000000000 00000001134677899999999999999776543 445566
Q ss_pred HhCCCCeEEEEecCCCcccccCChHHH
Q 020916 274 QLGADHVTFQGIKKAGHLVHLERPCAY 300 (320)
Q Consensus 274 ~~~~~~~~~~~~~~~gH~~~~~~~~~~ 300 (320)
.+++...-+..++++.|+-+.+-.++.
T Consensus 277 ~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 277 YLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cCCcchhheeecCCCccccccccCccc
Confidence 676333468889999999998866553
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.97 E-value=5.4e-10 Score=89.84 Aligned_cols=107 Identities=22% Similarity=0.285 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCCCCCc-cccHH-HHHH-Hhhc--c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------C
Q 020916 61 PSKPVVVLVHGFAAEG-IVTWQ-FQVG-ALTK--K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------G 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-~~~~~-~~~~-~l~~--~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~ 128 (320)
.++|++|++|||.++. ...|. .+.+ .|.. . ++||++|+...-...-...........+.+..+|+.| .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 5789999999999887 32454 3444 4555 4 9999999963211100000011222233344444333 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAM 167 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 167 (320)
.++++|||||+||.+|-.++..... +|.+++.++|+.+.
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999988877 89999999998754
No 143
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.95 E-value=9.4e-10 Score=82.54 Aligned_cols=98 Identities=26% Similarity=0.245 Sum_probs=55.3
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ce---EEecCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHhCCCcEEEE
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YS---VYIPDLLFFGGSITDEAD----RSPTFQAQCLATGLAKLGVDKCVLV 135 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---vi~~d~~G~G~s~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~lv 135 (320)
.||||+||.+++....|..+.+.|.++ |. |+++++-....+...... .+..++.+.+.+++++-+. ++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 479999999985544999999999988 87 899998543332111100 1112334444555556687 99999
Q ss_pred EeChhHHHHHHHHHhCccccccEEEecc
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
||||||.++-.+..-. ..++..+-+.+
T Consensus 81 gHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp EETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred EcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 9999999999888654 33444444443
No 144
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.95 E-value=1.3e-08 Score=77.69 Aligned_cols=129 Identities=21% Similarity=0.323 Sum_probs=89.3
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH--HHhhcc--ceEEe
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV--GALTKK--YSVYI 95 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~--~~l~~~--~~vi~ 95 (320)
..+...+.. +|.+.+|+.+.|+..+ .+.|.||++||..++.. .++... +.|++. |-|+.
T Consensus 34 ~~~~~s~~~-~g~~r~y~l~vP~g~~---------------~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~y 96 (312)
T COG3509 34 GSSVASFDV-NGLKRSYRLYVPPGLP---------------SGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAY 96 (312)
T ss_pred cCCcccccc-CCCccceEEEcCCCCC---------------CCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEEC
Confidence 445566666 6888999887765432 35589999999999887 666554 666665 99999
Q ss_pred cCCC-------CCCCCCCCCC----CCChhHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 96 PDLL-------FFGGSITDEA----DRSPTFQAQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 96 ~d~~-------G~G~s~~~~~----~~~~~~~~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
+|-- +.+.+..+.. ......+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..++
T Consensus 97 Pdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VA 176 (312)
T COG3509 97 PDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVA 176 (312)
T ss_pred cCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeee
Confidence 8521 2233322221 122333344444445555555 79999999999999999999999999988887
Q ss_pred ccc
Q 020916 163 SIL 165 (320)
Q Consensus 163 ~~~ 165 (320)
+..
T Consensus 177 g~~ 179 (312)
T COG3509 177 GLL 179 (312)
T ss_pred ccc
Confidence 765
No 145
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.95 E-value=7.8e-09 Score=86.10 Aligned_cols=91 Identities=15% Similarity=0.084 Sum_probs=68.4
Q ss_pred CccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH----HHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 75 EGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT----GLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~----~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
... .|..+++.|.+...+...|++|+|.+-... ...+...+++.+ +.+..+.++++|+||||||.++..++..
T Consensus 106 ~~~-~~~~li~~L~~~GY~~~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVY-YFHDMIEQLIKWGYKEGKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHH-HHHHHHHHHHHcCCccCCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 445 899999999998445589999999986543 223333444444 4445567899999999999999999988
Q ss_pred Cccc----cccEEEeccccccc
Q 020916 151 YPNL----VQAMVVSGSILAMT 168 (320)
Q Consensus 151 ~p~~----v~~lvl~~~~~~~~ 168 (320)
+|+. |+++|.++++....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 8763 78999998876543
No 146
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.95 E-value=1.2e-08 Score=77.61 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=62.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHh-------hcc-ceEEecCCCC-CCCCCCCCCCCChhHHHHHHHHH-HHHhC--CC
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGAL-------TKK-YSVYIPDLLF-FGGSITDEADRSPTFQAQCLATG-LAKLG--VD 130 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l-------~~~-~~vi~~d~~G-~G~s~~~~~~~~~~~~~~~l~~~-l~~~~--~~ 130 (320)
-|.|||+||.+..+......+...+ .+. +-|+++.+-- +-.++. ..........+.+.+. .++.+ ..
T Consensus 191 ~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred ccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccchhHHHHHHHHHHHHhhccCcccc
Confidence 3999999999987763444333221 111 3455555221 111221 1111222233334422 23334 35
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
++.++|.|+||..++.++.++|+.+.+.+++++..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 79999999999999999999999999999998764
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.92 E-value=4.2e-08 Score=81.73 Aligned_cols=177 Identities=18% Similarity=0.210 Sum_probs=114.0
Q ss_pred CCCeEEEEcCCC-C---Ccc-ccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH--------HhC
Q 020916 62 SKPVVVLVHGFA-A---EGI-VTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA--------KLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~-~---~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~--------~~~ 128 (320)
..|.++++||.+ . +.+ ..|........+...+-++|++.- ....++...++.+..+.+ ++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~------igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP------IGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC------CCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 568899999988 1 111 123333333343378888888732 111344444444444443 223
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCc-cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYP-NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
..+++|+|.|||+.++.+...... ..|+++|.++-+........
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------------------------------- 293 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------------------------------- 293 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----------------------------------
Confidence 458999999999888887775543 24888888775542211100
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
...++.+-.++.|+|+|.|.+|..++++..+.+.+++. ...+++++.+
T Consensus 294 -------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elhVI~~ 341 (784)
T KOG3253|consen 294 -------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELHVIGG 341 (784)
T ss_pred -------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEEEecC
Confidence 11222345577899999999999999999999999987 6788999999
Q ss_pred CCcccccCC---------hHHHHHHHHHHHHhh
Q 020916 288 AGHLVHLER---------PCAYNRCLKQFLASL 311 (320)
Q Consensus 288 ~gH~~~~~~---------~~~~~~~i~~fl~~~ 311 (320)
++|.+-... ..++...+.++|.++
T Consensus 342 adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 342 ADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999865422 245555555555544
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.88 E-value=2.5e-07 Score=68.99 Aligned_cols=102 Identities=19% Similarity=0.157 Sum_probs=72.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccc------eEEecCCCCC----CCCCC----C-------CCCCChhHHHHHHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKY------SVYIPDLLFF----GGSIT----D-------EADRSPTFQAQCLAT 122 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~------~vi~~d~~G~----G~s~~----~-------~~~~~~~~~~~~l~~ 122 (320)
-|.|||||.+++.. +...++..|...+ -++.+|--|- |.=+. | ....+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 47899999999999 9999998887664 2445554441 11010 1 012345555666766
Q ss_pred HHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEeccccc
Q 020916 123 GLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILA 166 (320)
Q Consensus 123 ~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 166 (320)
++..| ++.++.+|||||||.-...++..+.. .+..+|.++++..
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 66655 67899999999999999999877532 3889999998765
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.86 E-value=3.7e-08 Score=75.53 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCC-----C--CCC--------------CC------
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT-----D--EAD--------------RS------ 112 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~-----~--~~~--------------~~------ 112 (320)
+.-|.|||-||++++.. .|..+.-.|+.+ |-|.+++.|-+-.+-. . .+. ..
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 45699999999999999 999999999999 9999999985433210 0 000 00
Q ss_pred --hhHHHHHHHH---HHHHh------------------------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 113 --PTFQAQCLAT---GLAKL------------------------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 113 --~~~~~~~l~~---~l~~~------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
+...+..+.. +|+.+ +-.++.++|||+||..++.....+. .++..|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 1111222222 22222 1126889999999999988877654 5888888887
Q ss_pred cc
Q 020916 164 IL 165 (320)
Q Consensus 164 ~~ 165 (320)
..
T Consensus 274 WM 275 (399)
T KOG3847|consen 274 WM 275 (399)
T ss_pred ee
Confidence 65
No 150
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.85 E-value=2.5e-07 Score=73.59 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=39.4
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhC--C-CCeEEEEecCCCcccc
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLG--A-DHVTFQGIKKAGHLVH 293 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~gH~~~ 293 (320)
.+.|+++.+|..|.++|....+.+.+.+. + .+++++.+++.+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 46899999999999999999988888776 3 4688899999999864
No 151
>COG3150 Predicted esterase [General function prediction only]
Probab=98.81 E-value=1.3e-07 Score=65.80 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=64.6
Q ss_pred EEEEcCCCCCccccHHHHH--HHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQV--GALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~--~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
||.+||+.+|.. +.+... +.+.+..+-+.+-- +.....+...++.+..++...+.+.+.|+|.|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~~--------p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYST--------PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeeec--------CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999999888 776543 44444433332221 2334577888999999999998777999999999999
Q ss_pred HHHHHHhCccccccEEEeccccc
Q 020916 144 SFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|..++.++. +++ |+++|...
T Consensus 73 At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcC
Confidence 999999875 454 44666653
No 152
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.80 E-value=7.7e-07 Score=74.26 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHh-hcc----ceEEecCCCCCC-CCCCCC-CCCChhHHHHHHHHHHHHh-----C
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGAL-TKK----YSVYIPDLLFFG-GSITDE-ADRSPTFQAQCLATGLAKL-----G 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l-~~~----~~vi~~d~~G~G-~s~~~~-~~~~~~~~~~~l~~~l~~~-----~ 128 (320)
...|+|+++||............+..| .+. .-++.+|..+.. .+.... .....+.+++++.-.++.. +
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 356899999995422110112233333 222 346677753211 111001 1112233456666666653 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3568999999999999999999999999999998764
No 153
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.77 E-value=9.8e-08 Score=70.85 Aligned_cols=81 Identities=16% Similarity=0.232 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccc-eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKY-SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++..|||..|||++.. .+.++. +.+.+ -++++|+|-.- .+. + ..+.+.+.|||+|||
T Consensus 10 ~~~LilfF~GWg~d~~-~f~hL~--~~~~~D~l~~yDYr~l~----------~d~---~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-PFSHLI--LPENYDVLICYDYRDLD----------FDF---D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCChH-Hhhhcc--CCCCccEEEEecCcccc----------ccc---c------cccCceEEEEEEeHH
Confidence 4679999999999988 666553 23333 35678887321 110 1 124578999999999
Q ss_pred HHHHHHHHHhCccccccEEEeccccc
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
-.+|..+....| ++..|.+++.+.
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988876543 666666766553
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.75 E-value=6.2e-08 Score=74.39 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHH---HhhccceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh----CCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVG---ALTKKYSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKL----GVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~---~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~----~~~~~ 132 (320)
+.+..+||+||+..+........++ .+.-...++.+.+|+.|.-..-. ...+...-...+..+|+.+ +.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4788999999999875522222222 22222589999999887632211 1122333345555555554 56789
Q ss_pred EEEEeChhHHHHHHHHHhC----c-----cccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY----P-----NLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~----p-----~~v~~lvl~~~~~ 165 (320)
+|++||||+.+.+...... + .++..+|+++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999999887541 1 2577888887654
No 155
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.74 E-value=9.6e-07 Score=68.78 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=52.3
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHH
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFL 308 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 308 (320)
....+|-++++++.|.+++.+..++..+... +.+++...++++.|..|+ .+|++..+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4456899999999999999998888776654 235788888999999886 58999999999884
No 156
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.74 E-value=7e-06 Score=65.94 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=80.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d 97 (320)
-+.+.+..++..-+..|.... .......||+|||.+.+.. .....+-..|.+. +..+++.
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~-----------------~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit 124 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPAN-----------------SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSIT 124 (310)
T ss_pred hhcEEeecCCEEEEEEEeccc-----------------CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEec
Confidence 355667775444555555443 1235669999999998875 1334555677777 9999988
Q ss_pred CCCC--CCCCC-----------CC---CCC-------------C----hhHHHHHHHHHHHH---hCCCcEEEEEeChhH
Q 020916 98 LLFF--GGSIT-----------DE---ADR-------------S----PTFQAQCLATGLAK---LGVDKCVLVGFSYGG 141 (320)
Q Consensus 98 ~~G~--G~s~~-----------~~---~~~-------------~----~~~~~~~l~~~l~~---~~~~~~~lvGhS~Gg 141 (320)
+|.- ..... .. ... . .+.+..-|.+++.. .+..+++|+||+.|+
T Consensus 125 ~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA 204 (310)
T PF12048_consen 125 LPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGA 204 (310)
T ss_pred CCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhH
Confidence 8861 10000 00 000 0 11222333333333 354569999999999
Q ss_pred HHHHHHHHhCcc-ccccEEEecccc
Q 020916 142 MVSFKVAELYPN-LVQAMVVSGSIL 165 (320)
Q Consensus 142 ~~a~~~a~~~p~-~v~~lvl~~~~~ 165 (320)
.+++.+....+. .++++|++++..
T Consensus 205 ~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 205 GWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHHHHHhcCCCcccCeEEEEeCCC
Confidence 999999988764 589999999865
No 157
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.68 E-value=9.9e-08 Score=74.26 Aligned_cols=99 Identities=23% Similarity=0.234 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH-HHHHhCC--CcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT-GLAKLGV--DKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~-~l~~~~~--~~~~lvGhS~ 139 (320)
+..|||+-|..+-.+ -.-+...+...|.|+.+++||++.|...+-.......++.+.+ .|..++. +.+++.|+|.
T Consensus 243 q~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 557788877665433 1112233444599999999999999876644333333343333 3566664 5799999999
Q ss_pred hHHHHHHHHHhCccccccEEEeccc
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
||..++.+|..+|+ |+++|+-++.
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999997 8998876654
No 158
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.65 E-value=6.9e-08 Score=73.55 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhc---cceEEecCCCCCCCCCCCCCCCChhHH----HHHHHHHHHHhCC--CcE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTK---KYSVYIPDLLFFGGSITDEADRSPTFQ----AQCLATGLAKLGV--DKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~l~~~l~~~~~--~~~ 132 (320)
+...|||+||+.++.. .|..+...+.. .+.-..+...++.... ......++.. ++.+.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 5678999999999988 88887776665 2211122222221111 1111233333 4444444444443 479
Q ss_pred EEEEeChhHHHHHHHHH
Q 020916 133 VLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~ 149 (320)
.+|||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999976665
No 159
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.62 E-value=1.8e-07 Score=76.10 Aligned_cols=103 Identities=26% Similarity=0.148 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc-ce---EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK-YS---VYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
.-++|++||++.+.. .|..+...+... +. ++.+++++- +.........+.+..-+.+++...+.+++.|+|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 458999999977777 888877776665 55 888888865 22122234455566677777778888999999999
Q ss_pred hhHHHHHHHHHhCc--cccccEEEeccccccc
Q 020916 139 YGGMVSFKVAELYP--NLVQAMVVSGSILAMT 168 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~ 168 (320)
+||.+...++...+ .+|+.++.++++-...
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999887 7899999999876543
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=4.7e-07 Score=67.92 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCCCCccccHHH--HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHH--------HHHHHH-----
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC--------LATGLA----- 125 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~--------l~~~l~----- 125 (320)
.++..|.+-|-+.+.. +++ +...+.++ ...+.++-|-+|...++..-...-..+.| |.+...
T Consensus 112 ~~~KOG~~a~tgdh~y--~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws 189 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVY--TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWS 189 (371)
T ss_pred cCCeeEEEeecCCcee--EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 4455555555555543 333 33444444 77888888988887654322111111122 222222
Q ss_pred -HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh
Q 020916 126 -KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT 204 (320)
Q Consensus 126 -~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
..+.+++.++|-||||.+|......++..|.-+-++++....... .+..+.. ....+.++.....
T Consensus 190 ~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~-teg~l~~-------------~~s~~~~~~~~t~ 255 (371)
T KOG1551|consen 190 SADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA-TEGLLLQ-------------DTSKMKRFNQTTN 255 (371)
T ss_pred cccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhh-hhhhhhh-------------hhHHHHhhccCcc
Confidence 225679999999999999999998887666555444433211110 0000000 0011111111000
Q ss_pred hc--cccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCc-----EEEEecCCCCCCCHHHHHHHHHHhC
Q 020916 205 YK--KLWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQR-----VHLLWGEDDQIFNVELAHNMKEQLG 276 (320)
Q Consensus 205 ~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~ 276 (320)
+. ....+..-.....+... ..+.....++..+...- ..+..+.+| +.++.+++|..+|......+.+.+|
T Consensus 256 ~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~--T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP 333 (371)
T KOG1551|consen 256 KSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDEC--THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP 333 (371)
T ss_pred hhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhh--chhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC
Confidence 00 00011111111111111 11222222333222111 122222222 6788899999999988999999999
Q ss_pred CCCeEEEEecCCCcccc-cCChHHHHHHHHHHHHhhhh
Q 020916 277 ADHVTFQGIKKAGHLVH-LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 313 (320)
++++..++ +||..- +-+-+.+...|.+-|+++..
T Consensus 334 --g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 334 --GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred --CCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 99999998 599754 56778999999999988764
No 161
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.57 E-value=1.7e-06 Score=73.16 Aligned_cols=127 Identities=18% Similarity=0.140 Sum_probs=86.7
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEc--CCCCCccc--cHHHHHH---Hhhcc-ceEEe
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVH--GFAAEGIV--TWQFQVG---ALTKK-YSVYI 95 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lh--G~~~~~~~--~~~~~~~---~l~~~-~~vi~ 95 (320)
..|...||++|.-.++.+.+ .++.|+++..+ ...-.... .-....+ .++.+ |.|+.
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~----------------~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~ 85 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAG----------------AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVN 85 (563)
T ss_pred eeEEecCCeEEEEEEEccCC----------------CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEE
Confidence 45677799999998777632 25778888888 32222100 1112223 46666 99999
Q ss_pred cCCCCCCCCCCCCCCCChh--HHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 96 PDLLFFGGSITDEADRSPT--FQAQCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 96 ~d~~G~G~s~~~~~~~~~~--~~~~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.|.||.|.|.......... .-..|+.+.+.... .+++..+|.|++|...+.+|+..|..+++++...+...
T Consensus 86 qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 86 QDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 9999999999765443221 12334444444442 36899999999999999999999888888887776654
No 162
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.54 E-value=1.6e-05 Score=64.38 Aligned_cols=105 Identities=15% Similarity=0.130 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCCCCccccHHHH-------HHHhhccceEEecCCCCCCCC-CCCCCCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ-------VGALTKKYSVYIPDLLFFGGS-ITDEADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~-------~~~l~~~~~vi~~d~~G~G~s-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
+.|+||++||+|-.-. ....+ ...|. ...+++.|+.-...- ....-+..+.+.++-...+++..+.++++
T Consensus 121 ~DpVlIYlHGGGY~l~-~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLG-TTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEec-CCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 5799999999885443 22222 23333 468888888643200 01112234445566666777677888999
Q ss_pred EEEeChhHHHHHHHHHhCc-----cccccEEEeccccccc
Q 020916 134 LVGFSYGGMVSFKVAELYP-----NLVQAMVVSGSILAMT 168 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~ 168 (320)
|+|-|.||.+++.+++... ...+++|+++|.....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999998875421 1368999999998665
No 163
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.54 E-value=3.7e-05 Score=64.65 Aligned_cols=61 Identities=21% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC---------------------C-C-CeEEEEecCCCcccccCChHHHHHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG---------------------A-D-HVTFQGIKKAGHLVHLERPCAYNRCLK 305 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------~-~-~~~~~~~~~~gH~~~~~~~~~~~~~i~ 305 (320)
..+||+..|+.|.+++.-..+.+.+.+. . . +.+++.+-+|||+.. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 3689999999999999877777766553 0 1 267778889999996 68999999999
Q ss_pred HHHHh
Q 020916 306 QFLAS 310 (320)
Q Consensus 306 ~fl~~ 310 (320)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 164
>PLN02209 serine carboxypeptidase
Probab=98.52 E-value=3.1e-05 Score=65.19 Aligned_cols=105 Identities=20% Similarity=0.180 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHH----------------H-------hhccceEEecC-CCCCCCCCCCCC--CCChh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVG----------------A-------LTKKYSVYIPD-LLFFGGSITDEA--DRSPT 114 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~----------------~-------l~~~~~vi~~d-~~G~G~s~~~~~--~~~~~ 114 (320)
...|.|+++-|.++++. .+..+.+ . +.+..+++.+| ..|.|.|..... ..+.+
T Consensus 66 ~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~ 144 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDT 144 (437)
T ss_pred CCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 46799999999998887 5543321 1 12226899999 558888864332 12233
Q ss_pred HHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC----------ccccccEEEeccccc
Q 020916 115 FQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELY----------PNLVQAMVVSGSILA 166 (320)
Q Consensus 115 ~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~lvl~~~~~~ 166 (320)
..++++..+++.. ...+++|.|.|+||..+-.+|..- +-.++|+++.++...
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 4456666666543 235799999999999777776431 114678888887654
No 165
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.51 E-value=7.8e-06 Score=59.93 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC----CcEEE
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV----DKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~l 134 (320)
.+..|||+-|++..-. ..-..+...|.+. |.++-+.++.+-. .....++.+-++|+..++++++. ..++|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~---G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN---GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc---ccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4567999999886543 2456677888887 9999988763210 01224566678999999998853 37999
Q ss_pred EEeChhHHHHHHHHHh--CccccccEEEeccccc
Q 020916 135 VGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILA 166 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 166 (320)
+|||.|+.-.+.+... .+..+.+.|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999999988833 3556778788777653
No 166
>PLN02606 palmitoyl-protein thioesterase
Probab=98.49 E-value=5.4e-06 Score=64.69 Aligned_cols=101 Identities=20% Similarity=0.118 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCC--CCccccHHHHHHHhhc--cceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHhC--CCcEEE
Q 020916 62 SKPVVVLVHGFA--AEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKLG--VDKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~--~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~l 134 (320)
...|||+.||++ .+.. ....+.+.+.+ .+.+..+. .|-+. ...- ..+.++++.+.+.+.... .+-+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEE
Confidence 456899999999 4444 67777777752 23333333 22121 1111 345566666665554421 135999
Q ss_pred EEeChhHHHHHHHHHhCcc--ccccEEEecccccc
Q 020916 135 VGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAM 167 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 167 (320)
||+|.||.++-.++.+.|+ .|+.+|.++++...
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 9999999999999999877 49999999887543
No 167
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.43 E-value=4.6e-06 Score=67.63 Aligned_cols=150 Identities=15% Similarity=0.151 Sum_probs=93.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh-hc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT-YK 206 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 206 (320)
.++++++.|.|==|..++..|. ...||++++-+.-... .....+...+.... ..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L------------------------N~~~~l~h~y~~yG~~w 224 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL------------------------NMKANLEHQYRSYGGNW 224 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC------------------------CcHHHHHHHHHHhCCCC
Confidence 5779999999999999998888 4568888775432221 01111222222111 11
Q ss_pred cccCCchhHHHHHHHHhc---ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEE
Q 020916 207 KLWFPSCLYKDFLEVMFA---NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
. ....+|...-+. +.+....+..- -+.-....+++.|.++|.|..|++..++....+.+.++ +...+.
T Consensus 225 s-----~a~~dY~~~gi~~~l~tp~f~~L~~i---vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~-G~K~lr 295 (367)
T PF10142_consen 225 S-----FAFQDYYNEGITQQLDTPEFDKLMQI---VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP-GEKYLR 295 (367)
T ss_pred c-----cchhhhhHhCchhhcCCHHHHHHHHh---cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC-CCeeEE
Confidence 1 111122211110 11111111111 12222335668999999999999999999999999999 677899
Q ss_pred EecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 284 GIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 284 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.+|+++|.... ..+.+.+..|+..+...
T Consensus 296 ~vPN~~H~~~~---~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 296 YVPNAGHSLIG---SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred eCCCCCcccch---HHHHHHHHHHHHHHHcC
Confidence 99999998776 66778888898886543
No 168
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.41 E-value=3.3e-06 Score=71.84 Aligned_cols=104 Identities=17% Similarity=0.108 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCCCCcccc--HHHHHHHhhcc--ceEEecCCCCCCCCCCCC-------CCCChhHHHHHHHHHHHHhC--
Q 020916 62 SKPVVVLVHGFAAEGIVT--WQFQVGALTKK--YSVYIPDLLFFGGSITDE-------ADRSPTFQAQCLATGLAKLG-- 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~l~~~l~~~~-- 128 (320)
++|.+|++-|=+ ..... ...++..|+++ --++++++|-+|.|.+.. ...+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 466666665443 33212 22355667777 789999999999998532 23677778889988887763
Q ss_pred -----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 129 -----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 129 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..|++++|-|+||.+|..+-.++|+.|.+.+..+++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 23799999999999999999999999999998888765
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.40 E-value=3.1e-06 Score=67.01 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhc--c-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHh----CCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTK--K-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKL----GVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~----~~~~~ 132 (320)
..+..+||+||+..+-...-.+.++-... . ...+.+.+|..|.--.-..+ .+...-..++..+|+.+ ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46789999999987655333344433322 2 78899999976653322211 22222344555555554 46789
Q ss_pred EEEEeChhHHHHHHHHHhC--------ccccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY--------PNLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~--------p~~v~~lvl~~~~~ 165 (320)
+|++||||..++++...+. +.+++-+|+.+|-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999887642 33577777766544
No 170
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.39 E-value=0.00015 Score=60.69 Aligned_cols=128 Identities=15% Similarity=0.116 Sum_probs=82.8
Q ss_pred ceEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHh-------------
Q 020916 23 PHAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGAL------------- 87 (320)
Q Consensus 23 ~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l------------- 87 (320)
..++.+. .+..|+||...... .+..+|.||++.|.++.+. .- .+..++
T Consensus 46 sGYv~v~~~~~~~LFYwf~eS~~---------------~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~ 108 (454)
T KOG1282|consen 46 SGYVTVNESEGRQLFYWFFESEN---------------NPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLY 108 (454)
T ss_pred cceEECCCCCCceEEEEEEEccC---------------CCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcce
Confidence 3567775 58899998776532 1246899999999999887 33 222221
Q ss_pred ------hccceEEecCCC-CCCCCCCCCC-C--CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh
Q 020916 88 ------TKKYSVYIPDLL-FFGGSITDEA-D--RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 88 ------~~~~~vi~~d~~-G~G~s~~~~~-~--~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+..+++.+|.| |.|.|-.... + .+.+..++|+..++... .-.++.|.|-|++|...-.+|.+
T Consensus 109 ~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 109 LNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred eCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 122578888876 7777764432 1 24445566666665432 34689999999999877777653
Q ss_pred ----Cc------cccccEEEecccccc
Q 020916 151 ----YP------NLVQAMVVSGSILAM 167 (320)
Q Consensus 151 ----~p------~~v~~lvl~~~~~~~ 167 (320)
+. -.++|+++-++....
T Consensus 189 I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 189 ILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred HHhccccccCCcccceEEEecCcccCc
Confidence 21 147788877776543
No 171
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.36 E-value=3.2e-06 Score=71.08 Aligned_cols=129 Identities=16% Similarity=0.123 Sum_probs=80.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHH-HhhccceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVG-ALTKKYSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~-~l~~~~~vi~~d~~ 99 (320)
++......||++|.|.+.+. ..+ ..+.|++|+--|...-+. +.|..... .|.+....+..+.|
T Consensus 395 eQ~~atSkDGT~IPYFiv~K-~~~--------------~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIR 459 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRK-GAK--------------KDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIR 459 (648)
T ss_pred EEEEEEcCCCccccEEEEec-CCc--------------CCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecc
Confidence 44455555999999987752 111 125777776655443322 45555554 45555777778899
Q ss_pred CCCCCCCCC----CCCChhHHHHHHHHHHHHh---C---CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 100 FFGGSITDE----ADRSPTFQAQCLATGLAKL---G---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~----~~~~~~~~~~~l~~~l~~~---~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
|=|+=.+.- ...+-+...+|..++.+.| + .+++.+.|-|-||.+.-....++|+.+.++|+--|..
T Consensus 460 GGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 460 GGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred cCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 866543211 1122233455555555554 2 3578999999999999999999999888877655544
No 172
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.36 E-value=7.9e-06 Score=65.90 Aligned_cols=68 Identities=19% Similarity=0.249 Sum_probs=53.3
Q ss_pred CCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH---HHHHHHHHHHHhh
Q 020916 244 TVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC---AYNRCLKQFLASL 311 (320)
Q Consensus 244 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 311 (320)
.+..+. +|+|+++|.+|..+|......+.+.......+...+++++|........ +....+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344454 7999999999999999999998888872256888888999998864433 6778888888764
No 173
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.35 E-value=1.7e-05 Score=62.04 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCCCCcc-ccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGI-VTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvG 136 (320)
...|+|+.||+|.+.. .....+.+.+... ..+.++.. |.+....--..+.++++.+.+.+.... .+-+.+||
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 5568999999998765 2333444444332 34444432 333211122455566666666555421 13599999
Q ss_pred eChhHHHHHHHHHhCcc--ccccEEEeccccc
Q 020916 137 FSYGGMVSFKVAELYPN--LVQAMVVSGSILA 166 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~ 166 (320)
+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999987 5999999988754
No 174
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.33 E-value=3.8e-06 Score=55.57 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=56.8
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
..|+|+|.++.|+++|.+.++.+.+.++ +.+++++++.||..+.....-+.+.+.+||..-.-+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~--~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~lP 97 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP--GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTLP 97 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC--CceEEEEeccCcceecCCChHHHHHHHHHHHcCCCC
Confidence 4899999999999999999999999998 899999999999988755677899999999865443
No 175
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=1.4e-05 Score=69.35 Aligned_cols=103 Identities=18% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhh-----------------ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALT-----------------KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~-----------------~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~ 122 (320)
+.++-||+|++|..|+.. .-+.++..-. .+++.+++|+-+- -..-...++.++++-+.+
T Consensus 86 elsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe---~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE---FTAMHGHILLDQTEYVND 161 (973)
T ss_pred cCCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch---hhhhccHhHHHHHHHHHH
Confidence 346789999999998877 6665543222 1256666665420 000112345555555555
Q ss_pred HHHHh-----C--------CCcEEEEEeChhHHHHHHHHHh---CccccccEEEeccccc
Q 020916 123 GLAKL-----G--------VDKCVLVGFSYGGMVSFKVAEL---YPNLVQAMVVSGSILA 166 (320)
Q Consensus 123 ~l~~~-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~ 166 (320)
.|+.+ + ...++++||||||.+|...+.. .++.|.-++..+++..
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 55433 1 2249999999999999877743 2345666666666543
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.21 E-value=1.3e-05 Score=69.62 Aligned_cols=105 Identities=18% Similarity=0.072 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCCCC---cc-ccHHHHHHHhhccceEEecCCC-C---CCCCCCCC--CCCChhHHHHH---HHHHHHHh
Q 020916 61 PSKPVVVLVHGFAAE---GI-VTWQFQVGALTKKYSVYIPDLL-F---FGGSITDE--ADRSPTFQAQC---LATGLAKL 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~---~~-~~~~~~~~~l~~~~~vi~~d~~-G---~G~s~~~~--~~~~~~~~~~~---l~~~l~~~ 127 (320)
+..|+||++||.+.. .. .....++.... .+.|+.+++| | +..+.... ....+.+.... +.+-++..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 467999999996532 22 01222222211 2889999998 3 33222111 22333443333 33334444
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHh--CccccccEEEeccccc
Q 020916 128 G--VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILA 166 (320)
Q Consensus 128 ~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 166 (320)
+ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4 4579999999999999888765 2346888888876553
No 177
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.20 E-value=3.7e-06 Score=66.08 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHh-CC--CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 116 QAQCLATGLAKL-GV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 116 ~~~~l~~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.++|...|+.. .. ++..|+|+||||..|+.++.++|+.+.+++.+++...
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 455666666543 22 2279999999999999999999999999999998753
No 178
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.20 E-value=0.00025 Score=54.56 Aligned_cols=105 Identities=17% Similarity=0.120 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
..|.|+++-.+.++.....+...+.|-....|+.-|+-.-..-+-....++++++++-+.+.+..+|.+ +++++.|.-+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 456888888887766535566677787778899988864333333345689999999999999999965 7888888755
Q ss_pred HH-----HHHHHHhCccccccEEEecccccc
Q 020916 142 MV-----SFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 142 ~~-----a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
.- ++..+...|....+.++++++...
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 43 333444567678899999887653
No 179
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.19 E-value=1.9e-05 Score=57.54 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCCC-----CCCC-------------C----CC-Chh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGGS-----ITDE-------------A----DR-SPT 114 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~s-----~~~~-------------~----~~-~~~ 114 (320)
.-|++.++-|+..+.. .+.. +.+.-+++ +.|+++|-.-.|.. +..+ + .+ -.+
T Consensus 43 ~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 4689999999988776 4432 22233344 89999995433322 1111 0 01 122
Q ss_pred HHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 115 FQAQCLATGLAK----LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 115 ~~~~~l~~~l~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
...+.+-+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|...
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 234555555552 2345799999999999999999999998888777666553
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.18 E-value=0.00014 Score=59.33 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=44.5
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe-----------cCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI-----------KKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~-----------~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.+..|+..|..+|.+.-..+.+.+. +=+++++.+ .+..|.+-+..-..+.+.+-..++++..
T Consensus 296 yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 296 YVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred EEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 6788999999999998888777664 246777777 3346776666666677777777766543
No 181
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.07 E-value=0.00035 Score=60.01 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCC--------CCCCChhHHHHHHHHHHHHh--
Q 020916 60 KPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITD--------EADRSPTFQAQCLATGLAKL-- 127 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~l~~~l~~~-- 127 (320)
+++.|.+|..-|.-+.+. ..|....-.|.++ +--...-.||=|.-... ....++.++++....+++.=
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 357788888777644433 3444333233344 33333344664443221 12356666665555555432
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
..+.++++|-|.||++.-..+...|+.++++|+--|....
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 2347999999999999999999999999999987776643
No 182
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=3.6e-05 Score=65.43 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=78.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
+...+...||+.+.-.+.-.+..+ ..+++|.+|..+|.-+-+- ..|..--..|.+. +-....|.|
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k-------------~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIK-------------LDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEecCCCCccceEEEEechhh-------------hcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 344455558877665433221111 2357888888877644322 3444332233344 666677889
Q ss_pred CCCCCCCCC--------CCCChhHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 100 FFGGSITDE--------ADRSPTFQAQCLATGLAK--LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s~~~~--------~~~~~~~~~~~l~~~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|=|.-...- ...+++++.....-+++. ....+..+.|.|.||.++..++..+|+.+.++|+--|...
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 865443211 123444444443333332 1346799999999999999999999999999887666553
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.02 E-value=6e-05 Score=62.53 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=73.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCC--C
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLF--F 101 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G--~ 101 (320)
+|...|.+|.+.. ...+.|++|+|||.+ ++.. ....--..|+++ +-|+.+++|= +
T Consensus 77 EDCL~LNIwaP~~-----------------~a~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~l 138 (491)
T COG2272 77 EDCLYLNIWAPEV-----------------PAEKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGAL 138 (491)
T ss_pred ccceeEEeeccCC-----------------CCCCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccc
Confidence 4777888888772 123679999999975 3333 222223456655 8888888871 1
Q ss_pred CCC--------CCCCCCCChhHHH---HHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccc
Q 020916 102 GGS--------ITDEADRSPTFQA---QCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSIL 165 (320)
Q Consensus 102 G~s--------~~~~~~~~~~~~~---~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~ 165 (320)
|.- .....+..+.+++ +.+.+-|++.| .++|.|+|+|.||+.++.+++. |. .+.++|+.++..
T Consensus 139 GfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 139 GFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred eeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 211 1111223444444 34444555665 4579999999999998877764 43 577777777766
Q ss_pred c
Q 020916 166 A 166 (320)
Q Consensus 166 ~ 166 (320)
.
T Consensus 218 ~ 218 (491)
T COG2272 218 S 218 (491)
T ss_pred C
Confidence 4
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=9.4e-05 Score=56.16 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=69.1
Q ss_pred CeEEEEcCCCCCcccc--HHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 64 PVVVLVHGFAAEGIVT--WQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
.|+|++||++.++. . ...+.+.+.+. ..|++.|. |-| .....-..+.++++.+.+.+.... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~-~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCS-SLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccc-cchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 67999999998877 5 77777777776 77888876 344 111112345555665555555332 245999999
Q ss_pred ChhHHHHHHHHHhCcc-ccccEEEeccccc
Q 020916 138 SYGGMVSFKVAELYPN-LVQAMVVSGSILA 166 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 166 (320)
|.||.++-.++..-++ .|+.+|.++++-.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999887654 5889998887653
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.92 E-value=0.00013 Score=61.02 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=56.6
Q ss_pred cHHHHHHHhhcc-c------eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHH
Q 020916 79 TWQFQVGALTKK-Y------SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 79 ~~~~~~~~l~~~-~------~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a 148 (320)
.|..+++.|.+. | ...-+|+|- +. ...+.....+...|+.. ..++++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~-----~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP-----AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch-----hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688999998763 2 333368771 11 12334455555555543 347899999999999999999
Q ss_pred HhCcc------ccccEEEecccccc
Q 020916 149 ELYPN------LVQAMVVSGSILAM 167 (320)
Q Consensus 149 ~~~p~------~v~~lvl~~~~~~~ 167 (320)
...+. .|+++|.++++...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCC
Confidence 87743 59999999988653
No 186
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.82 E-value=9.9e-05 Score=64.97 Aligned_cols=121 Identities=17% Similarity=0.075 Sum_probs=65.7
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHHHHHhhcc-ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQVGALTKK-YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~-~~vi~~d~~---- 99 (320)
+|-..|.+|.+..... ....|++|+|||.+.... ..+. -...+..+ .-||.+++|
T Consensus 106 EDCL~LnI~~P~~~~~---------------~~~lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~ 169 (535)
T PF00135_consen 106 EDCLYLNIYTPSNASS---------------NSKLPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAF 169 (535)
T ss_dssp S---EEEEEEETSSSS---------------TTSEEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHH
T ss_pred chHHHHhhhhcccccc---------------ccccceEEEeecccccCCCccccccc-ccccccCCCEEEEEeccccccc
Confidence 3666777777665221 114699999999764322 0222 22333444 999999998
Q ss_pred CCCCCCCCC---CCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 100 FFGGSITDE---ADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~---~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
|+-.+.... ....+.++...|..+-+ ..| .++|.|+|||.||..+..++..- ...++++|+.++..
T Consensus 170 Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 170 GFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 332222111 33445555444444433 344 45799999999999988777652 24699999998854
No 187
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.81 E-value=3.6e-05 Score=59.70 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhc---cceEEecCCCCCCCCC-CCCC-CCChhHHHHHHHHHHHHhC--CCcE
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTK---KYSVYIPDLLFFGGSI-TDEA-DRSPTFQAQCLATGLAKLG--VDKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~---~~~vi~~d~~G~G~s~-~~~~-~~~~~~~~~~l~~~l~~~~--~~~~ 132 (320)
+..|||+.||+|.+.. ..+..+.+.+.+ ..-|.+++.- -+.+. .... -..+...++.+.+.+.... ..-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 5568999999997642 134444444433 3456666552 21110 0000 0234445555666555432 1459
Q ss_pred EEEEeChhHHHHHHHHHhCcc-ccccEEEeccccc
Q 020916 133 VLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSILA 166 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 166 (320)
.++|+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999865 6999999988753
No 188
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.75 E-value=0.0032 Score=51.28 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=48.6
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhC----------------------CCC-eEEEEecCCCcccccCChHHHHHHHHH
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLG----------------------ADH-VTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
.+||+..|+.|.+++.-..+.+.+.+. ..+ .+++.+-+|||+.. .+|+...+.+..
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~ 312 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQR 312 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHH
Confidence 689999999999999877777666553 012 67777889999996 589999999999
Q ss_pred HHHh
Q 020916 307 FLAS 310 (320)
Q Consensus 307 fl~~ 310 (320)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9965
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.73 E-value=0.00022 Score=57.70 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=74.0
Q ss_pred CeEEEEcCCCCCccccHHH---HHHHhhcc--ceEEecCCCCCCCCCCCCC----------CCChhHHHHHHHHHHHHhC
Q 020916 64 PVVVLVHGFAAEGIVTWQF---QVGALTKK--YSVYIPDLLFFGGSITDEA----------DRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~---~~~~l~~~--~~vi~~d~~G~G~s~~~~~----------~~~~~~~~~~l~~~l~~~~ 128 (320)
.+|+|--|.-++-. .|.. ++-.++.. .-+|..++|-+|+|.+-.. ..+.++-.+|.+.++.+++
T Consensus 81 gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 66888888877665 4432 33444444 6788889999999975331 2455566778888887774
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
..+++.+|-|+||+++..+=.++|+.|.|....+++.
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 2479999999999999999999999888876655554
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.51 E-value=0.00076 Score=56.09 Aligned_cols=109 Identities=25% Similarity=0.280 Sum_probs=80.2
Q ss_pred eccCCCCCeEEEEcCCCCCccccHHH----HHHHhhcc--ceEEecCCCCCCCCCCCCC-------CCChhHHHHHHHHH
Q 020916 57 ALKKPSKPVVVLVHGFAAEGIVTWQF----QVGALTKK--YSVYIPDLLFFGGSITDEA-------DRSPTFQAQCLATG 123 (320)
Q Consensus 57 ~~~~~~~~~vv~lhG~~~~~~~~~~~----~~~~l~~~--~~vi~~d~~G~G~s~~~~~-------~~~~~~~~~~l~~~ 123 (320)
.+..+.+|..|+|-|=+.... .|.. ..-.++++ ..|+..++|-+|.|.+... ..+..+...|+..+
T Consensus 80 ~~~~~~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~f 158 (514)
T KOG2182|consen 80 QWAKPGGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEF 158 (514)
T ss_pred ccccCCCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHH
Confidence 334567888999988665543 3411 22334444 7899999999998864331 14556678899999
Q ss_pred HHHhCC-------CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 124 LAKLGV-------DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 124 l~~~~~-------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|++++. .|.+.+|-|+-|.++..+=..+|+.+.|.|..+++..
T Consensus 159 I~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 159 IKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 988742 2799999999999999999999999999888777664
No 191
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.0015 Score=47.90 Aligned_cols=105 Identities=21% Similarity=0.344 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCCCCccccHHH---------------HH-HHhhccceEEecCCCC---CCCCCCCC--CCCChhHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF---------------QV-GALTKKYSVYIPDLLF---FGGSITDE--ADRSPTFQAQC 119 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~---------------~~-~~l~~~~~vi~~d~~G---~G~s~~~~--~~~~~~~~~~~ 119 (320)
.++..+|+|||.|--....|.+ ++ +..+..|.|+..+.-- +-.+...+ ...+..+.+.-
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3566899999988644435533 12 2333448888776431 11111111 11222222222
Q ss_pred -HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccc
Q 020916 120 -LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSIL 165 (320)
Q Consensus 120 -l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 165 (320)
...++.....+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2233344456789999999999999999999875 677777777664
No 192
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.49 E-value=0.00035 Score=50.27 Aligned_cols=38 Identities=16% Similarity=0.021 Sum_probs=29.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCcc----ccccEEEecccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSIL 165 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 165 (320)
...+++++|||+||.+|..++..... .+..++..+++.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45789999999999999999887654 456666666654
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.45 E-value=0.0099 Score=45.37 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCC--CccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH----HHHHHHHHh----CC-
Q 020916 62 SKPVVVLVHGFAA--EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ----CLATGLAKL----GV- 129 (320)
Q Consensus 62 ~~~~vv~lhG~~~--~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~----~l~~~l~~~----~~- 129 (320)
++.+|=|+-|... .....|+.+.+.|+++ |.|++.-+.- | .+-...+. .....++.+ +.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4456667766533 3335899999999988 9999976641 1 11111222 122222222 21
Q ss_pred ---CcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 130 ---DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 130 ---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
-+++-+|||+|+-+-+.+...++..-++-++++..-
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 267889999999999988877765556777776543
No 194
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.45 E-value=0.00023 Score=41.85 Aligned_cols=48 Identities=23% Similarity=0.367 Sum_probs=27.6
Q ss_pred CCCceEEEcCCCceeeEeccCccc-ccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETI-EKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW 80 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~ 80 (320)
..+.+.|.++||..|..+....+. ..+ ..+.+|+|++.||+.+++. .|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~------------~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSN------------QNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTT------------TTTT--EEEEE--TT--GG-GG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcc------------cCCCCCcEEEECCcccChH-HH
Confidence 357889999999999886554432 110 2257899999999999988 76
No 195
>COG0627 Predicted esterase [General function prediction only]
Probab=97.42 E-value=0.0011 Score=53.33 Aligned_cols=108 Identities=19% Similarity=0.148 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCC--------------CCCCCCCCC---C-----CCChhH
Q 020916 61 PSKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLL--------------FFGGSITDE---A-----DRSPTF 115 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~--------------G~G~s~~~~---~-----~~~~~~ 115 (320)
.+-|+++++||..++.. .....+-+..... +.++++|-. |-+.|--.+ . .+.++.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 35678899999987753 1122222333333 666665322 222221111 1 123332
Q ss_pred -HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 116 -QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 116 -~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
+.+++-+.+++... ++-.++||||||.=|+.+|.++|++++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 35566645543322 268999999999999999999999999998888877544
No 196
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.41 E-value=0.0058 Score=56.53 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCC-CCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT-DEADRSPTFQAQCLATGLAKLGV-DKCVLVGFS 138 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS 138 (320)
...|++.|+|..-+... .+..++..|. .|-+|.... ..+..+++..++....-++.+.. +|+.++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 47899999999988777 6777666553 234443322 22446788888877777777764 689999999
Q ss_pred hhHHHHHHHHHhCc--cccccEEEecccccc
Q 020916 139 YGGMVSFKVAELYP--NLVQAMVVSGSILAM 167 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~ 167 (320)
+|+.++..+|.... +....+|++++.+..
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999986542 335668999877643
No 197
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.40 E-value=0.00023 Score=49.47 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccc-eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKY-SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
...||+.-||+..+. ....++ +.+++ -++++|+..... +.++ .+ .+.+.||++|||-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpeN~dl~lcYDY~dl~l------dfDf-------sA------y~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPENHDLLLCYDYQDLNL------DFDF-------SA------YRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCCCCcEEEEeehhhcCc------ccch-------hh------hhhhhhhhhhHHH
Confidence 348899999998887 666554 44553 567888873311 1111 11 2567899999999
Q ss_pred HHHHHHHHhCccccccEEEecccc
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.+|-++....+ +++.+.+++..
T Consensus 69 wvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCC
Confidence 99999988765 66666666543
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.38 E-value=0.0064 Score=44.36 Aligned_cols=53 Identities=30% Similarity=0.159 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 114 TFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.-+.+|..+++.+. ..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 334566667766553 23699999999999999998886678999999988753
No 199
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.31 E-value=0.0062 Score=47.69 Aligned_cols=103 Identities=19% Similarity=0.129 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCC--CccccHHHHHHHhhcc----ceEEecCCCCC---CCCCCCCCCCChhHHHHHHHHHHHHh----
Q 020916 61 PSKPVVVLVHGFAA--EGIVTWQFQVGALTKK----YSVYIPDLLFF---GGSITDEADRSPTFQAQCLATGLAKL---- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~--~~~~~~~~~~~~l~~~----~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~l~~~l~~~---- 127 (320)
.+-|++++.||-.. +.. .++.+-..+.+. -.++.+|.--- ...-. ........+++++.-.++..
T Consensus 96 ~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred ccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCccc
Confidence 36789999998432 222 333333333333 45566654310 00000 00112222333333333322
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
....-+|.|.|+||.+++..+..+|+++-.++..++..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 12356899999999999999999999999988888765
No 200
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.29 E-value=0.00081 Score=47.52 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
..+.+..+++.....++++.|||+||.+|..++...
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 345555555555556799999999999999888753
No 201
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.06 E-value=0.0018 Score=43.18 Aligned_cols=48 Identities=19% Similarity=0.376 Sum_probs=29.4
Q ss_pred HhcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH
Q 020916 17 KMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ 83 (320)
Q Consensus 17 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~ 83 (320)
....+....+++ +|..||+....++ .++..+|||+|||+++-. .|..+
T Consensus 64 ~lN~~phf~t~I-~g~~iHFih~rs~-----------------~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 64 RLNSFPHFKTEI-DGLDIHFIHVRSK-----------------RPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp HHTTS-EEEEEE-TTEEEEEEEE--S------------------TT-EEEEEE--SS--GG-GGHHH
T ss_pred HHHcCCCeeEEE-eeEEEEEEEeeCC-----------------CCCCeEEEEECCCCccHH-hHHhh
Confidence 344677778888 6999999776652 246779999999999877 66554
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.03 E-value=0.0019 Score=49.25 Aligned_cols=47 Identities=17% Similarity=0.067 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----ccccccEEEecccc
Q 020916 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY----PNLVQAMVVSGSIL 165 (320)
Q Consensus 118 ~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~ 165 (320)
+-+..+++..+ +++.+.|||.||.+|..++... .++|.++...+++.
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33444444444 4699999999999999999874 34788888888765
No 203
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.93 E-value=0.0019 Score=49.72 Aligned_cols=38 Identities=18% Similarity=0.367 Sum_probs=34.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+.++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34568999999999999999999999999999999875
No 204
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.86 E-value=0.008 Score=50.52 Aligned_cols=105 Identities=16% Similarity=0.026 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHH-------------------hhccceEEecC-CCCCCCCCCCC--CCCChhHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGA-------------------LTKKYSVYIPD-LLFFGGSITDE--ADRSPTFQAQC 119 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~-------------------l~~~~~vi~~d-~~G~G~s~~~~--~~~~~~~~~~~ 119 (320)
++|.|+++.|.++++. .|..+.+. +...-.++.+| .-|.|.|.... ...+.....+|
T Consensus 100 ~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 5899999999999998 77766431 11124688899 66888887522 22333333444
Q ss_pred HHHHHHH-------hC--CCcEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccccc
Q 020916 120 LATGLAK-------LG--VDKCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSILAM 167 (320)
Q Consensus 120 l~~~l~~-------~~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 167 (320)
+..+.+. .. ..+.+|+|-|+||.-+..+|...-+ ..++++++.+....
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 4444332 22 2489999999999999988865433 35667666655443
No 205
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.077 Score=43.20 Aligned_cols=238 Identities=14% Similarity=0.077 Sum_probs=117.4
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
...+||++=||.+............+.+. +.++.+-.|-+-..-... ...+......-+.+++...+ ..++++--.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 44456666677766651333444445454 788887777543322211 22444455566677776655 456777789
Q ss_pred ChhHHHHHHHH-H---hC-c---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 138 SYGGMVSFKVA-E---LY-P---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 138 S~Gg~~a~~~a-~---~~-p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
|+||...+... . ++ | +...+++....+................ ........+.+..........+
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-------~~~~~~~~~~~~~~~i~~~~~~ 189 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-------PPDDYVARWARLNYHITLLTMA 189 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-------CchhhHHHHHhcCeEEEEEEee
Confidence 99988776544 1 12 2 2355666666554322211111110000 0000000000000000000000
Q ss_pred CC---chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEE
Q 020916 210 FP---SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQG 284 (320)
Q Consensus 210 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~ 284 (320)
.. .......+....... ...++..+.. .-.....+.+.+.+..|.++|.+..+.+.+... +.+++.+-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~r--~~~~~~r~~~-----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~ 262 (350)
T KOG2521|consen 190 GNEGGAYLLGPLAEKISMSR--KYHFLDRYEE-----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVK 262 (350)
T ss_pred ecccchhhhhhhhhcccccc--chHHHHHHHh-----hhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEee
Confidence 00 001111111100000 0000110000 111123457888899999999999888865554 23566666
Q ss_pred ecCCCccccc-CChHHHHHHHHHHHHhhhh
Q 020916 285 IKKAGHLVHL-ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 285 ~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 313 (320)
+.++-|..++ ..|..+.+...+|++....
T Consensus 263 ~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 263 FKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred ccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 7789999886 4899999999999998764
No 206
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.74 E-value=0.0032 Score=48.74 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=20.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 345799999999999999888753
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.74 E-value=0.0049 Score=53.06 Aligned_cols=83 Identities=17% Similarity=0.233 Sum_probs=52.5
Q ss_pred cHHHHHHHhhcc-ce-----EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHH
Q 020916 79 TWQFQVGALTKK-YS-----VYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~-----vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a 148 (320)
.|..+++.|.+. |. ...+|+| .+. .....-+.+...+..+|+.. +-++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~--~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSF--QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCc--cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 678899988765 53 4444555 111 10111234444555555533 357899999999999999987
Q ss_pred HhCc---------------cccccEEEeccccc
Q 020916 149 ELYP---------------NLVQAMVVSGSILA 166 (320)
Q Consensus 149 ~~~p---------------~~v~~lvl~~~~~~ 166 (320)
.... ..|+++|.++++..
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccC
Confidence 6321 24889999988754
No 208
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.68 E-value=0.003 Score=52.43 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=51.8
Q ss_pred cHHHHHHHhhcc-ce------EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----HhCCCcEEEEEeChhHHHHHHH
Q 020916 79 TWQFQVGALTKK-YS------VYIPDLLFFGGSITDEADRSPTFQAQCLATGLA----KLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
.|..+++.|..- |. -..+|+|- |. ......+.+...+...++ .-+.+|++||+||||+.+.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~--~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SY--HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---cc--CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 677777777653 33 45567662 11 111122333444444443 3355899999999999999999
Q ss_pred HHhCcc--------ccccEEEeccccc
Q 020916 148 AELYPN--------LVQAMVVSGSILA 166 (320)
Q Consensus 148 a~~~p~--------~v~~lvl~~~~~~ 166 (320)
...+++ .|++.+-++++..
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchhc
Confidence 988776 3666666665543
No 209
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.64 E-value=0.34 Score=41.01 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=67.9
Q ss_pred cceEEEeeccCCCCCeEEEEcCCCCCccccHH--HHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh
Q 020916 50 EKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ--FQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL 127 (320)
Q Consensus 50 ~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~--~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~ 127 (320)
.+.+++...++-..|..|..-|+-. +. -|+ .+++.|.. =-.+.-|.|=-|.+--.....--+...+-|.+.++.|
T Consensus 276 eEi~yYFnPGD~KPPL~VYFSGyR~-aE-GFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 276 QEFIYYFNPGDFKPPLNVYFSGYRP-AE-GFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred CeeEEecCCcCCCCCeEEeeccCcc-cC-cchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHh
Confidence 3455555556667788899999865 33 333 34455543 2334447776555532222212334566777888888
Q ss_pred CCC--cEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 128 GVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 128 ~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
+.+ .++|-|-|||..-|+.+++... ..++|+--|
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 864 5999999999999999998753 345554433
No 210
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.58 E-value=0.018 Score=46.95 Aligned_cols=86 Identities=26% Similarity=0.199 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvG 136 (320)
+...-||+-|=|+-.. .=+.+.++|.+. +.|+.+|-.=|=.| ..+.+..++|+..+++.. +..++.|+|
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 3445667767665555 556678899888 99999995433333 357788899999988765 567899999
Q ss_pred eChhHHHHHHHHHhCcc
Q 020916 137 FSYGGMVSFKVAELYPN 153 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~ 153 (320)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999988776666554
No 211
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.50 E-value=0.0073 Score=45.06 Aligned_cols=68 Identities=16% Similarity=0.073 Sum_probs=44.8
Q ss_pred HHHhhccceEEecCCCCCCCCCCC-----C----CCCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhC
Q 020916 84 VGALTKKYSVYIPDLLFFGGSITD-----E----ADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 84 ~~~l~~~~~vi~~d~~G~G~s~~~-----~----~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+..|....+|++|-+|--...... . ......+..+....+|++.+. ++++|+|||.|+.++.++..++
T Consensus 39 as~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344555588999988853222211 0 112334445556666777754 5899999999999999999874
No 212
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.50 E-value=0.027 Score=45.34 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=50.9
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.++..|-.++.+..|.++.++.+..+.+.+| +...+..+|+..|... +..+.+.+..|+.+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LP-G~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLP-GEKALRMVPNDPHNLI---NQFIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCC-CceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhc
Confidence 5677889999999999999999999999999 5667889999999765 34455666667766554
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.49 E-value=0.0043 Score=50.51 Aligned_cols=87 Identities=23% Similarity=0.255 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCCC-CccccHHHHHHHhhccceEEecCCCCCCCCCCCCC---CCChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 61 PSKPVVVLVHGFAA-EGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEA---DRSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 61 ~~~~~vv~lhG~~~-~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
+++-.||+.||+-+ +.. .|...+......+.=..+..+|+-....... ..--...++++.+.+....++++..+|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 45679999999988 445 7777777766662222333333322221111 111223355555555555678999999
Q ss_pred eChhHHHHHHHH
Q 020916 137 FSYGGMVSFKVA 148 (320)
Q Consensus 137 hS~Gg~~a~~~a 148 (320)
||+||.++..+.
T Consensus 157 hSLGGLvar~AI 168 (405)
T KOG4372|consen 157 HSLGGLVARYAI 168 (405)
T ss_pred eecCCeeeeEEE
Confidence 999999887554
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.45 E-value=0.033 Score=49.31 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=58.2
Q ss_pred CCeEEEEcCCCCCcc--ccHHH--HHHHhhcc-ceEEecCCC----CCCCCC--CCCCCCChhHHHHHHHHH---HHHhC
Q 020916 63 KPVVVLVHGFAAEGI--VTWQF--QVGALTKK-YSVYIPDLL----FFGGSI--TDEADRSPTFQAQCLATG---LAKLG 128 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~--~~~~~--~~~~l~~~-~~vi~~d~~----G~G~s~--~~~~~~~~~~~~~~l~~~---l~~~~ 128 (320)
.|++|++||.+.... ..+.. ....+..+ .-|+.+.+| |+.... .......+.++...+..+ |...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 699999999864322 02211 11222332 667777776 222221 123445555555444443 44444
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
.+++.|+|||.||..+..+...- ...+.++|..++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 46799999999999998776421 23456666665544
No 215
>PLN02162 triacylglycerol lipase
Probab=96.44 E-value=0.0098 Score=49.78 Aligned_cols=33 Identities=30% Similarity=0.327 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
.+.+.+++......++++.|||+||.+|..+|.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555545557999999999999998764
No 216
>PLN00413 triacylglycerol lipase
Probab=96.42 E-value=0.011 Score=49.58 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
..+.+.++++.....++++.|||+||.+|..+|.
T Consensus 270 i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 4556677777666668999999999999998875
No 217
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.29 E-value=0.013 Score=43.22 Aligned_cols=74 Identities=20% Similarity=0.090 Sum_probs=41.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----HhCCCcEEEEEeChhHHHHHHHHHh------CccccccEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA----KLGVDKCVLVGFSYGGMVSFKVAEL------YPNLVQAMVV 160 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~lvGhS~Gg~~a~~~a~~------~p~~v~~lvl 160 (320)
..+..+++|--.... .-..+...=+.++...++ .-...+++|+|+|.||.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 677777777422211 000122222333444443 3344689999999999999999877 2357889998
Q ss_pred eccccc
Q 020916 161 SGSILA 166 (320)
Q Consensus 161 ~~~~~~ 166 (320)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 887654
No 218
>PLN02571 triacylglycerol lipase
Probab=96.21 E-value=0.0094 Score=49.39 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020916 115 FQAQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 150 (320)
++.+++..+++..... ++++.|||+||.+|+..|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4456666666655432 68999999999999998864
No 219
>PLN02454 triacylglycerol lipase
Probab=96.19 E-value=0.011 Score=48.97 Aligned_cols=32 Identities=22% Similarity=0.153 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020916 119 CLATGLAKLGVD--KCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 119 ~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+..+++..... ++++.|||+||.+|+..|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444443333 39999999999999999854
No 220
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.99 E-value=0.059 Score=42.65 Aligned_cols=129 Identities=18% Similarity=0.144 Sum_probs=83.8
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH------h-------hcc
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA------L-------TKK 90 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~------l-------~~~ 90 (320)
.++++.++..+.+|.+....+- ...+|..+.+.|.++.+..-|..+-+. + -+.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~--------------ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~ 71 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANV--------------KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD 71 (414)
T ss_pred cceeeecCceEEEEEeeecccc--------------ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh
Confidence 3566777888888877643221 136788999999876655233333211 1 122
Q ss_pred ceEEecCCC-CCCCCCCCCCC---CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCcc------
Q 020916 91 YSVYIPDLL-FFGGSITDEAD---RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYPN------ 153 (320)
Q Consensus 91 ~~vi~~d~~-G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~------ 153 (320)
..++.+|.| |-|.|--.... .+..+.+.|+.++++.+ .-.|++|+.-|+||-+|..++...-+
T Consensus 72 adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~ 151 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE 151 (414)
T ss_pred ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc
Confidence 567777766 67777543322 34566788999998865 33589999999999999998865322
Q ss_pred ---ccccEEEeccccc
Q 020916 154 ---LVQAMVVSGSILA 166 (320)
Q Consensus 154 ---~v~~lvl~~~~~~ 166 (320)
.+.+++|-++...
T Consensus 152 i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 152 IKLNFIGVALGDSWIS 167 (414)
T ss_pred eeecceeEEccCcccC
Confidence 2556777666554
No 221
>PLN02408 phospholipase A1
Probab=95.90 E-value=0.017 Score=47.23 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020916 117 AQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 117 ~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.+..+++..... ++++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45556666655433 589999999999999988653
No 222
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.78 E-value=0.028 Score=45.71 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=31.6
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEeccccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILA 166 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 166 (320)
+.+|+.|||||+|+.+....+....+ .|+.+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 66789999999999999988765444 3888999987663
No 223
>PLN02310 triacylglycerol lipase
Probab=95.70 E-value=0.034 Score=46.12 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+..+++... ..++.+.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 4455666665542 1368999999999999988854
No 224
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.64 E-value=0.032 Score=39.72 Aligned_cols=102 Identities=8% Similarity=0.038 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCCCccccHHH------HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH---HH-HHHHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF------QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ---CL-ATGLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~------~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~---~l-~~~l~~~~~~ 130 (320)
.+.+||+.+-.++.-. .|.. +++.+.+. .+.++++ |...-+.........+.++ .. .-+++..-..
T Consensus 25 aG~pVvvFpts~Grf~-eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~AyerYv~eEalpg 101 (227)
T COG4947 25 AGIPVVVFPTSGGRFN-EYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYERYVIEEALPG 101 (227)
T ss_pred CCCcEEEEecCCCcch-hhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 4556666666666555 4543 34555555 5666655 2211111111122222222 12 2223333345
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..++-|.||||..|..+.-++|+...++|.+++...
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 677889999999999999999999999999987763
No 225
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.59 E-value=0.023 Score=46.64 Aligned_cols=104 Identities=20% Similarity=0.167 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHhC---CCcEE
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD---RSPTFQAQCLATGLAKLG---VDKCV 133 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~l~~~l~~~~---~~~~~ 133 (320)
..++|+|+..-|.+.+...........|. -+-+.+++|-+|.|.+...+ .++.+-+.|...+++.++ .++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 34679999999998765422233333333 57788999999999876644 567777889888887774 36788
Q ss_pred EEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 134 LVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
--|-|-||+.++.+=.-+|+.|++.|.--++.
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 88999999999998888999999988765554
No 226
>PLN02934 triacylglycerol lipase
Probab=95.52 E-value=0.027 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
....+..+++.....++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4455666666665568999999999999998874
No 227
>PLN02324 triacylglycerol lipase
Probab=95.44 E-value=0.032 Score=46.32 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHh
Q 020916 117 AQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 117 ~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+.+..+++.... -++++.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4456666665542 258999999999999988854
No 228
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.41 E-value=0.028 Score=41.15 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=46.2
Q ss_pred CcEEEEecCCCCCCCHHHHHHHH---HHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMK---EQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLAS 310 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 310 (320)
++++-|-|+.|.++.+.+..... ..++......++.+|+||+-.+.-+ +++.-.|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 56778999999999877655544 4445445567888899999876543 7888899999875
No 229
>PLN02802 triacylglycerol lipase
Probab=95.14 E-value=0.042 Score=46.66 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+..+++.... .++++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34455666655432 258999999999999988864
No 230
>PLN02753 triacylglycerol lipase
Probab=95.08 E-value=0.04 Score=46.97 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
....+..+++.... -++++.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655432 379999999999999998853
No 231
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.05 E-value=0.04 Score=46.91 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+++..+++... ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456667766553 1359999999999999988854
No 232
>PLN02761 lipase class 3 family protein
Probab=94.85 E-value=0.05 Score=46.37 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+...+..+++... .-++++.|||+||.+|+..|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4455666665542 126999999999999998885
No 233
>PLN02719 triacylglycerol lipase
Probab=94.82 E-value=0.059 Score=45.89 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
....+..+++.... .++.+.|||+||.+|+..|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555554431 269999999999999998853
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.04 E-value=0.11 Score=42.72 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566777777877776679999999999999988864
No 235
>PLN02847 triacylglycerol lipase
Probab=93.99 E-value=0.12 Score=44.91 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 379999999999999988754
No 236
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.60 E-value=0.5 Score=40.90 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=48.7
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhC----C------CCeEEEEecCCCcccccC--ChHHHHHHHHHHHHhhhhc
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLG----A------DHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~~ 314 (320)
-.+++.||-.|+++|+.....+++++. . .-.++..+||.+|+.--. .+-.....|.+|+++-..+
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 479999999999999877666655542 1 235788999999997643 4456788899999876544
No 237
>PF03283 PAE: Pectinacetylesterase
Probab=91.51 E-value=5.2 Score=33.38 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=25.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHh----CccccccEEEecccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~ 165 (320)
.++++|-|.|.||.-++..+.. .|..++-..+.++..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 4679999999999998876643 454444444455544
No 238
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=91.39 E-value=0.32 Score=42.03 Aligned_cols=102 Identities=17% Similarity=0.124 Sum_probs=58.4
Q ss_pred CCCCCeEEEEcCCCC---CccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH---HhC--C
Q 020916 60 KPSKPVVVLVHGFAA---EGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA---KLG--V 129 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~---~~~--~ 129 (320)
..++-.|+-+||.|. ++. .-+...+.++.. ..|+.+|+.---+.+ .+...++..-....+|+ .+| .
T Consensus 393 p~S~sli~HcHGGGfVAqsSk-SHE~YLr~Wa~aL~cPiiSVdYSLAPEaP---FPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSK-SHEPYLRSWAQALGCPIISVDYSLAPEAP---FPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred CCCceEEEEecCCceeeeccc-cccHHHHHHHHHhCCCeEEeeeccCCCCC---CCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 346668888999874 333 344444444444 889999975322221 12233333333333343 334 3
Q ss_pred CcEEEEEeChhHHHHHHHHHh----CccccccEEEecccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSIL 165 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~ 165 (320)
++++++|-|.||.+.+-.+.+ .-.-.+|+++.-++.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 689999999999876665543 111246777765553
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.12 E-value=2.7 Score=27.55 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=54.2
Q ss_pred cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCCh-hHHHHHHHHHHHHhCCCcEEEEEeChhH--HHHHHHHHhCccc
Q 020916 79 TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSP-TFQAQCLATGLAKLGVDKCVLVGFSYGG--MVSFKVAELYPNL 154 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~lvGhS~Gg--~~a~~~a~~~p~~ 154 (320)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.....++++||-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 556666677665 66555666666554322211122 3556778888888888899999988643 3444677889999
Q ss_pred cccEEE
Q 020916 155 VQAMVV 160 (320)
Q Consensus 155 v~~lvl 160 (320)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 988764
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.12 E-value=0.54 Score=36.78 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=22.4
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 125 AKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 125 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334467999999999999999988774
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.12 E-value=0.54 Score=36.78 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=22.4
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 125 AKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 125 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334467999999999999999988774
No 242
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.54 E-value=1.6 Score=33.64 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=28.4
Q ss_pred CChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 111 RSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+...=++.+.+.++.. .-++++++|+|+|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 34444455565555542 236899999999999999887654
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.60 E-value=0.74 Score=40.06 Aligned_cols=53 Identities=19% Similarity=0.216 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHh-----Ccc------ccccEEEecccc
Q 020916 113 PTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAEL-----YPN------LVQAMVVSGSIL 165 (320)
Q Consensus 113 ~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~ 165 (320)
.......+.+.+.+.+ .++++.+||||||.++=.+... .|+ ...|+|+++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3333445555555544 3579999999999988766543 232 256777777653
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.92 E-value=0.79 Score=39.10 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=32.5
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhC-----ccccccEEEecccccc
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELY-----PNLVQAMVVSGSILAM 167 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~ 167 (320)
..|.+|+.|||+|+|+.+....+... -..|..+++++++...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 34778999999999999999776532 2358889999987744
No 245
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=85.92 E-value=1.5 Score=38.05 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=55.9
Q ss_pred HHHHhhccceEEecCCCCCCCCCC---CCCCCChhHH-----------HHHHHHHHHHh---CCCcEEEEEeChhHHHHH
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSIT---DEADRSPTFQ-----------AQCLATGLAKL---GVDKCVLVGFSYGGMVSF 145 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~---~~~~~~~~~~-----------~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~ 145 (320)
+...+...|.++.=|- ||..+.. .....+.+.+ +.--+++++.. ..+.-+..|.|.||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4566777799999986 6655543 1111222221 11222333332 345688999999999999
Q ss_pred HHHHhCccccccEEEeccccc
Q 020916 146 KVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 146 ~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..|+++|+..++++.-+|...
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHhChhhcCeEEeCCchHH
Confidence 999999999999999888765
No 246
>PRK12467 peptide synthase; Provisional
Probab=83.73 E-value=5.6 Score=44.62 Aligned_cols=98 Identities=17% Similarity=-0.002 Sum_probs=68.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~G 140 (320)
..+.+++.|...++.. .+..+...|.....++.+..++.-.... ...++..++....+.+.... ..+..+.|+|+|
T Consensus 3691 ~~~~l~~~h~~~r~~~-~~~~l~~~l~~~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVF-DYEPLAVILEGDRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cccceeeechhhcchh-hhHHHHHHhCCCCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 3456999999998888 8888888887777888887765422221 23455666666666666554 357999999999
Q ss_pred HHHHHHHHHh---CccccccEEEec
Q 020916 141 GMVSFKVAEL---YPNLVQAMVVSG 162 (320)
Q Consensus 141 g~~a~~~a~~---~p~~v~~lvl~~ 162 (320)
|.++..++.. ..+.+.-+.+++
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999988764 334455555554
No 247
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=79.39 E-value=2.4 Score=29.10 Aligned_cols=19 Identities=37% Similarity=0.859 Sum_probs=16.8
Q ss_pred CCCCeEEEEcCCCCCccccH
Q 020916 61 PSKPVVVLVHGFAAEGIVTW 80 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~ 80 (320)
+++|.|+-+||+.|... .|
T Consensus 50 p~KpLVlSfHG~tGtGK-n~ 68 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGK-NF 68 (127)
T ss_pred CCCCEEEEeecCCCCcH-HH
Confidence 58999999999999988 55
No 248
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=78.45 E-value=7.5 Score=33.45 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=58.6
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHHHHHhhcc--ceEEecCCC----
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQVGALTKK--YSVYIPDLL---- 99 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~--~~vi~~d~~---- 99 (320)
|-.-|.+|.++. ...+..++|.|-|.|.-+. ..|+ .+.|+.. .-|+.+++|
T Consensus 119 DCLYlNVW~P~~-----------------~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~F 179 (601)
T KOG4389|consen 119 DCLYLNVWAPAA-----------------DPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAF 179 (601)
T ss_pred hceEEEEeccCC-----------------CCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccc
Confidence 555677777753 1134557888888763222 1222 2445444 455556655
Q ss_pred C---CCCCCCCCCCCChhHH---HHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccc
Q 020916 100 F---FGGSITDEADRSPTFQ---AQCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSI 164 (320)
Q Consensus 100 G---~G~s~~~~~~~~~~~~---~~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~ 164 (320)
| .+..+..+....+-++ .+.+.+-|...| .+++.|+|.|.|+.-...-+..- ...++..|+-++.
T Consensus 180 GFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 180 GFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred eEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 1 1111212222333333 234455555555 45799999999987554332211 1235555554443
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=77.07 E-value=3.4 Score=33.39 Aligned_cols=30 Identities=33% Similarity=0.334 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+.++++..++++-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 345567778889999999999999887764
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=76.99 E-value=2.1 Score=35.12 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
+.++++..|+.+-.++|||+|=..|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4456677788999999999999988877643
No 251
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=76.78 E-value=30 Score=27.74 Aligned_cols=88 Identities=14% Similarity=0.014 Sum_probs=46.9
Q ss_pred CeEEEEcCCCCCccc-----cHHHHHHHh-hcc-ceEEecCCCCCCCC--------CCCC-------CCCChhHHHHH-H
Q 020916 64 PVVVLVHGFAAEGIV-----TWQFQVGAL-TKK-YSVYIPDLLFFGGS--------ITDE-------ADRSPTFQAQC-L 120 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~-----~~~~~~~~l-~~~-~~vi~~d~~G~G~s--------~~~~-------~~~~~~~~~~~-l 120 (320)
..|||+=|.+.+... .-..+.+.+ ... -..+.+=.+|.|.. .... ....++..+.+ .
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 456777776654431 123344555 222 24445556777772 1100 01223333332 2
Q ss_pred HHHHHHhC-CCcEEEEEeChhHHHHHHHHHhC
Q 020916 121 ATGLAKLG-VDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 121 ~~~l~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
..+.+... .+++.++|.|-|+..|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 23334443 35689999999999999998653
No 252
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=76.24 E-value=3.8 Score=33.10 Aligned_cols=30 Identities=23% Similarity=0.196 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+.++++..+.++..++|||+|-..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445566778889999999999988887764
No 253
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=72.03 E-value=5.2 Score=32.20 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=23.3
Q ss_pred HHHHHHhC-CCcEEEEEeChhHHHHHHHHHh
Q 020916 121 ATGLAKLG-VDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 121 ~~~l~~~~-~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+++..+ +.+-.++|||+|=..|+.++..
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 34455666 8899999999999988877743
No 254
>PRK10279 hypothetical protein; Provisional
Probab=71.14 E-value=6.6 Score=31.82 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.+.++..++..-.++|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 455566678888899999999999999997543
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=70.99 E-value=7.6 Score=28.44 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.+.++..++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344445557777889999999999999997653
No 256
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=69.99 E-value=26 Score=26.55 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-c-eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-Y-SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l 134 (320)
+..+|++.||...++...|..+-..|.+. | +|+....-|+- .++++.+.++.-+.+.+.|
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~d~vi~~l~~~~~~~v~L 198 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LVDTVIEYLRKNGIKEVHL 198 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cHHHHHHHHHHcCCceEEE
Confidence 44567777777666553444443344443 4 45544433321 1344555555556555544
No 257
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=69.83 E-value=7.6 Score=31.64 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=39.4
Q ss_pred cHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 79 TWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 79 ~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.|+++++.|...-..++++ | |.. -.....-+.+.++..++..-.++|-|+|+.++..++...
T Consensus 3 d~~rl~r~l~~~~~gLvL~--G-GG~--------RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLG--G-GGA--------RGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEEC--C-hHH--------HHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 5677788887763333332 1 100 011223455566666887778999999999999999764
No 258
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.55 E-value=49 Score=28.10 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=60.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCC-----------C-------------hhHHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADR-----------S-------------PTFQAQ 118 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~-----------~-------------~~~~~~ 118 (320)
|+|+++ |...+....+..+.+.+.+. ..++.+|.-=.+.+.... +. + .+.+++
T Consensus 2 ~tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~-di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ 79 (403)
T PF06792_consen 2 KTIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPP-DISREEVARAAGDSIEAVRSSGDRGEAIEAMAR 79 (403)
T ss_pred CEEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCC-CcCHHHHHHhcCCChHHhhccCCHHHHHHHHHH
Confidence 345555 54455444777788888777 999999975444433221 11 1 122334
Q ss_pred HHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEE
Q 020916 119 CLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 119 ~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
.+..++..+ .+.-++-+|-|.|..++....+..|=-+-++++
T Consensus 80 ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 80 GAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 444444444 245578889999999999999988866666654
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=68.00 E-value=9.1 Score=28.59 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+.+.++..++..-.++|-|.||.+|..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 33444555666778999999999999998754
No 260
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=67.46 E-value=21 Score=27.05 Aligned_cols=63 Identities=22% Similarity=0.188 Sum_probs=44.3
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh----hHHHHHHHHHhCc-cccccEEEe
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY----GGMVSFKVAELYP-NLVQAMVVS 161 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lvl~ 161 (320)
-+|+..+.++. ..++.+.+++.+.++++..+ -.++|+|+|. |..++-.+|.+.. ..+..++-+
T Consensus 78 d~V~~~~~~~~-------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAF-------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccc-------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 46777665432 23567888999999998877 5699999998 8889998887753 134444433
No 261
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=66.39 E-value=10 Score=30.26 Aligned_cols=33 Identities=21% Similarity=0.155 Sum_probs=26.0
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
-+.+.+++.++..-.+.|-|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 345555667877778899999999999999753
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.57 E-value=12 Score=28.78 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=23.5
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 121 ~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.++..++..-.++|-|.|+.++..++...
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3344445666778999999999999998654
No 263
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=65.38 E-value=9.9 Score=30.99 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
-+.+.++..++..-++.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 355666777788889999999999999999753
No 264
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=64.16 E-value=88 Score=26.36 Aligned_cols=89 Identities=20% Similarity=0.161 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCCCcc------ccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEE
Q 020916 62 SKPVVVLVHGFAAEGI------VTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLV 135 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~------~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lv 135 (320)
+...||++||...+.. ..|..+++.+.++--+-.+|..-.|.-+ .++..+..+..++... +-.+|
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~------GleeDa~~lR~~a~~~---~~~lv 240 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD------GLEEDAYALRLFAEVG---PELLV 240 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc------chHHHHHHHHHHHHhC---CcEEE
Confidence 3456999998765432 2889999888887555556655444333 2344455555555433 33888
Q ss_pred EeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
..|+.=.+++ |.+||-++.+++..
T Consensus 241 a~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 241 ASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred Eehhhhhhhh-----hhhccceeEEEeCC
Confidence 8888766665 56899998888644
No 265
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=63.36 E-value=10 Score=32.84 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=40.3
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhC-----CCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLG-----ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+++..+|-.|..+++.......+.++ .....+.++ .+||++.+++|+...+.+..|+..
T Consensus 427 kw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 427 KWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred eEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 46777777777776655444444443 112334445 579999999999999999998875
No 266
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=63.33 E-value=9.5 Score=33.76 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=25.8
Q ss_pred HHHHH-HHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 120 LATGL-AKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 120 l~~~l-~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+.+++ +..++++-.++|||+|=..|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455 578899999999999999999888654
No 267
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=62.82 E-value=6.2 Score=33.18 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=35.2
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC-----ChHHHHHHHHHHHH
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE-----RPCAYNRCLKQFLA 309 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~ 309 (320)
.+|+|+|++|+..... -.+.+ .+.+..+.+.||++|...+. ..++....|.+|..
T Consensus 353 rmlFVYG~nDPW~A~~--f~l~~--g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 353 RMLFVYGENDPWSAEP--FRLGK--GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred eEEEEeCCCCCcccCc--cccCC--CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 5999999999875321 11111 12367788889999986643 23456666777764
No 268
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=62.79 E-value=14 Score=27.17 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=23.6
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 122 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.++..+...-.++|-|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3444556666788899999999999987654
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.68 E-value=14 Score=28.29 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.+.+...+...-.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 344455557666788999999999999998764
No 270
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=59.82 E-value=16 Score=29.08 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=27.0
Q ss_pred cEEEEEeChhHHHHHHHHH---hCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAE---LYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~---~~p~~v~~lvl~~~~~~ 166 (320)
+++|.|.|+|+.-+..... ..-+++++.++.+++..
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 6999999999887665432 23357999999988764
No 271
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=59.73 E-value=26 Score=25.39 Aligned_cols=72 Identities=24% Similarity=0.216 Sum_probs=46.5
Q ss_pred EEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC------CCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 67 VLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE------ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 67 v~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
|++-|.|++.. .-.+++..|..+|+--.+-+|.--.|.... .+|.++.. ....++.++..--+|+|.|.-
T Consensus 44 vl~cGNGgSaa-dAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAA-DAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchh-hHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 44457777777 778888888877777666666655553221 33454443 445566677666788888877
Q ss_pred HH
Q 020916 141 GM 142 (320)
Q Consensus 141 g~ 142 (320)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 64
No 272
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=58.78 E-value=8.7 Score=32.89 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcccc
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLV 155 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 155 (320)
+.+.+...++.+-++.|-|.|+.+|..++...++.+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334444446667789999999999999998666553
No 273
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=58.43 E-value=21 Score=26.16 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=23.0
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 121 ~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.++..+...-.++|-|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344445656668899999999999998654
No 274
>COG3933 Transcriptional antiterminator [Transcription]
Probab=58.13 E-value=78 Score=27.26 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
.-..||+.||....+ +....+..|-+.--+.++|+| -+.++.+..+.+.+.+++.+..+=.++=..||.
T Consensus 108 ~v~vIiiAHG~sTAS--SmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 108 RVKVIIIAHGYSTAS--SMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred ceeEEEEecCcchHH--HHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 456899999987554 456677777666778899988 235677888888899988887775666678887
Q ss_pred HHHHHHH
Q 020916 142 MVSFKVA 148 (320)
Q Consensus 142 ~~a~~~a 148 (320)
.....-.
T Consensus 177 L~~f~~~ 183 (470)
T COG3933 177 LTSFGSI 183 (470)
T ss_pred HHHHHHH
Confidence 7665433
No 275
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=56.71 E-value=21 Score=22.01 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=18.6
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+.+++.++|-|.|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 456799999999999998888765
No 276
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=56.24 E-value=62 Score=24.39 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=44.2
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEE
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMV 159 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 159 (320)
..+.+..+ +.++.+|-+|.... .....+.+..+++......++++=-+..+.-.+..+..+-+ .+.++|
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~~--------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lI 146 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSPR--------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLI 146 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSST--------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEE
T ss_pred HHHHHhhcCCCEEEEecCCcchh--------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEE
Confidence 34445444 89999999976432 24567788888888876667776555555555554444322 367777
Q ss_pred E
Q 020916 160 V 160 (320)
Q Consensus 160 l 160 (320)
+
T Consensus 147 l 147 (196)
T PF00448_consen 147 L 147 (196)
T ss_dssp E
T ss_pred E
Confidence 5
No 277
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=56.20 E-value=13 Score=29.93 Aligned_cols=20 Identities=35% Similarity=0.838 Sum_probs=17.1
Q ss_pred CCCCCeEEEEcCCCCCccccH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTW 80 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~ 80 (320)
++.+|.++=+||+.++.. .|
T Consensus 106 ~p~KPLvLSfHG~tGTGK-N~ 125 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGK-NY 125 (344)
T ss_pred CCCCCeEEEecCCCCCch-hH
Confidence 368999999999999988 55
No 278
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=55.24 E-value=10 Score=33.65 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=28.3
Q ss_pred EEEEEeChhHHHHHHHHHhCcc-ccccEEEeccccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSILAMT 168 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~ 168 (320)
++--+.|-||.-++..|.+..+ .|++++...|.....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 3444889999999999987644 689999888876544
No 279
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=55.03 E-value=9.3 Score=32.56 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccE
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 158 (320)
+.+.+...+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444446667789999999999999998666555444
No 280
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=54.14 E-value=12 Score=30.40 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN 153 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 153 (320)
+.+.+...++.+-++.|-|.|+.+|..++...++
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 3344444576777899999999999999875443
No 281
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=54.04 E-value=10 Score=31.93 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccE
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 158 (320)
+.+.+...++.+-++.|-|.|+.+|..+|...++.+..+
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 344445556777789999999999999998655544443
No 282
>PRK02399 hypothetical protein; Provisional
Probab=53.62 E-value=1.4e+02 Score=25.48 Aligned_cols=96 Identities=16% Similarity=0.084 Sum_probs=59.1
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC----------CCC-------------ChhHHHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE----------ADR-------------SPTFQAQC 119 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~----------~~~-------------~~~~~~~~ 119 (320)
+.|+ +=|...+....+..+.+.+.+. ..|+.+|.-..|....+. ... ..+.+++.
T Consensus 4 ~~I~-iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIY-IAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEE-EEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 4444 4466666554777777777775 999999984444221110 000 11223444
Q ss_pred HHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEE
Q 020916 120 LATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 120 l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
+..++..+ .+.-++-+|-|.|..++....+..|--+-++++
T Consensus 83 a~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 83 AAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 44555433 345688899999999999999988866666554
No 283
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=52.22 E-value=1.8 Score=34.60 Aligned_cols=89 Identities=24% Similarity=0.181 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCC----------CCCCCCCCCCCCCChh--------HHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDL----------LFFGGSITDEADRSPT--------FQAQCLA 121 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~----------~G~G~s~~~~~~~~~~--------~~~~~l~ 121 (320)
..-|.+++.||+++... ........+... +.++..+. +|++.+.......... ....+..
T Consensus 47 ~~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 47 KKLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred ccCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 37899999999999888 555567777666 77666664 3332222211111101 0111111
Q ss_pred HHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 122 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
..... .++....|+++|+..+..++...+
T Consensus 126 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 126 LLGAS--LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHhhh--cCcceEEEEEeeccchHHHhhcch
Confidence 11111 257888888888888888887765
No 284
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.09 E-value=25 Score=27.93 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=23.7
Q ss_pred HHHHHHhCCC-cEEEEEeChhHHHHHHHHHhCcc
Q 020916 121 ATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPN 153 (320)
Q Consensus 121 ~~~l~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 153 (320)
.+.+...+.. .-.++|-|.|+.++..++...+.
T Consensus 17 l~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 17 LDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344444555 45888999999999999876543
No 285
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=48.47 E-value=36 Score=27.87 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=16.1
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 020916 133 VLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.|-|+||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5679999999999998643
No 286
>PLN03019 carbonic anhydrase
Probab=47.83 E-value=31 Score=28.24 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
....|.-.+..++.+.|+|+|||-=|.+...+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 34567777888999999999999866665544
No 287
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=46.40 E-value=1.2e+02 Score=26.27 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccc--cccEEEe
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVS 161 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~ 161 (320)
+.+.+.+.++-+.+.+..+.+|--++=|.-|...|..+.+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 45667777777778888899999999999999999988664 6787774
No 288
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=46.30 E-value=81 Score=25.89 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChh--HHHHHHHHHhCccccccEEEeccc
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYG--GMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~G--g~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
...+..++..+...+++|+|-|-= =-+=.+++.++|++|.++.+=+..
T Consensus 265 ~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 265 GQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred ccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 344565777777789999998842 233345667899999998776654
No 289
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=44.66 E-value=39 Score=26.26 Aligned_cols=33 Identities=24% Similarity=0.172 Sum_probs=23.6
Q ss_pred HHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCc
Q 020916 120 LATGLAKLGVD--KCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 120 l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.+.+...++. .-.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444445554 3479999999999999997653
No 290
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=44.51 E-value=34 Score=27.76 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=22.6
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCcccc
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLV 155 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 155 (320)
..++.+-++.|.|.|+.+|..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345566689999999999999987544333
No 291
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=44.35 E-value=44 Score=26.57 Aligned_cols=66 Identities=11% Similarity=0.002 Sum_probs=42.8
Q ss_pred CCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH-HHHHHHHHhC-CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ-CLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~l~~~l~~~~-~~~~~lvGh 137 (320)
..|+||++.|+.+++. ..-+.+...|... ++|.++..|- .++... -+-.+-.++. .+.+.|+=-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~R 121 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNR 121 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcC
Confidence 4699999999987665 3567788888888 9999986551 122111 2334445553 346777766
Q ss_pred Ch
Q 020916 138 SY 139 (320)
Q Consensus 138 S~ 139 (320)
|+
T Consensus 122 SW 123 (264)
T TIGR03709 122 SH 123 (264)
T ss_pred cc
Confidence 65
No 292
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=43.44 E-value=19 Score=25.96 Aligned_cols=44 Identities=25% Similarity=0.101 Sum_probs=24.6
Q ss_pred CCCCCCCCCC---CCCChhHHHHHH----HHHHHHh----CCCcEEEEEeChhHH
Q 020916 99 LFFGGSITDE---ADRSPTFQAQCL----ATGLAKL----GVDKCVLVGFSYGGM 142 (320)
Q Consensus 99 ~G~G~s~~~~---~~~~~~~~~~~l----~~~l~~~----~~~~~~lvGhS~Gg~ 142 (320)
-|||...... ..++...++.-+ ..+.+.. .++++.|+|.|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3788772211 346777777777 3444443 246799999999877
No 293
>PLN03014 carbonic anhydrase
Probab=42.60 E-value=44 Score=27.60 Aligned_cols=32 Identities=19% Similarity=0.252 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
....|.-.+..++.+.++|+|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 34566667888999999999999866665544
No 294
>PRK14974 cell division protein FtsY; Provisional
Probab=42.49 E-value=1.8e+02 Score=24.24 Aligned_cols=62 Identities=13% Similarity=0.031 Sum_probs=40.1
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVV 160 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl 160 (320)
+.++.+|-.|....+ ..+.+.+..+.+......+++|.-+.-|.-+...+..+.+ .+.++|+
T Consensus 223 ~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 223 IDVVLIDTAGRMHTD--------ANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred CCEEEEECCCccCCc--------HHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 778888888764422 3455666666666666667777777767766666655432 4566665
No 295
>PLN00416 carbonate dehydratase
Probab=41.86 E-value=55 Score=25.98 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
....|.-.+..++.+.++++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 345667777889999999999998777665543
No 296
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=41.35 E-value=98 Score=22.46 Aligned_cols=46 Identities=20% Similarity=0.088 Sum_probs=24.5
Q ss_pred HHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 117 AQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 117 ~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
.+.+.++++.+ ..++++++|-|..|...+.++...++.+..++=.+
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~n 101 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCC
Confidence 34455555444 23679999999999999999877666666666444
No 297
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=40.40 E-value=59 Score=17.26 Aligned_cols=32 Identities=22% Similarity=0.102 Sum_probs=20.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLV 135 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lv 135 (320)
.+|..+++-||+. .+++..+++.++.++++++
T Consensus 7 a~v~~~~fSgHad-------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHAD-------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp SEEEESGCSSS-B-------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEeecCCCC-------------HHHHHHHHHhcCCCEEEEe
Confidence 4566667666643 4678888888877666665
No 298
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=40.18 E-value=1.8e+02 Score=23.03 Aligned_cols=53 Identities=13% Similarity=0.238 Sum_probs=30.5
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|-|..|........+++.+...+.+.++.++|-++. .|++..+...+.+++
T Consensus 2 ~~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~-----~~~~~~~~~~~~~~~ 54 (250)
T TIGR02069 2 VIIGGAEDKVGDREILREFVSRAGGEDAIIVIITSASE-----EPREVGERYITIFSR 54 (250)
T ss_pred eEEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCC-----ChHHHHHHHHHHHHH
Confidence 45666666655555666666665545567777776553 344444444444443
No 299
>PRK06490 glutamine amidotransferase; Provisional
Probab=40.16 E-value=1.7e+02 Score=22.89 Aligned_cols=86 Identities=9% Similarity=0.006 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecC----CC-CCCC------CCCCCCCCChhHHHHHHHHHHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPD----LL-FFGG------SITDEADRSPTFQAQCLATGLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d----~~-G~G~------s~~~~~~~~~~~~~~~l~~~l~~~~~~ 130 (320)
....+|+.|--..... ....+++.....+.++.+. .| .... +..+...++...+...+.++++..-..
T Consensus 7 ~~~vlvi~h~~~~~~g-~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~~ 85 (239)
T PRK06490 7 KRPVLIVLHQERSTPG-RVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLKE 85 (239)
T ss_pred CceEEEEecCCCCCCh-HHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHHC
Confidence 4556677787666555 5555555444335555432 11 0000 000111122233455555666544334
Q ss_pred cEEEEEeChhHHHHHHHH
Q 020916 131 KCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a 148 (320)
++-++|.|+|..+...+.
T Consensus 86 ~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 86 NKPFLGICLGAQMLARHL 103 (239)
T ss_pred CCCEEEECHhHHHHHHHc
Confidence 466899999999887764
No 300
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=39.92 E-value=1.6e+02 Score=22.24 Aligned_cols=35 Identities=14% Similarity=0.027 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
+.++.....+|..+.....-++|.|+|..+....+
T Consensus 62 ~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 62 DPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 33577778888777765557889999998877664
No 301
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=39.90 E-value=1.3e+02 Score=26.11 Aligned_cols=63 Identities=11% Similarity=0.035 Sum_probs=41.8
Q ss_pred cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEE
Q 020916 90 KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVV 160 (320)
Q Consensus 90 ~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl 160 (320)
.|.++.+|-+|.-. .-+.+.+.+..+.+......+++|--++-|.-+...+..+.+ .+.++|+
T Consensus 182 ~~DvViIDTaGr~~--------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 182 NFDIIIVDTSGRHK--------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCEEEEECCCCCc--------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 38899999887532 223455666666666666677888777777777766666543 3667766
No 302
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=39.56 E-value=47 Score=26.67 Aligned_cols=84 Identities=19% Similarity=0.189 Sum_probs=44.0
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc--------ceEEecCCCCCCCCCCCCCCCChhHHH--------HHHHHHHHHhC
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK--------YSVYIPDLLFFGGSITDEADRSPTFQA--------QCLATGLAKLG 128 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~--------~~vi~~d~~G~G~s~~~~~~~~~~~~~--------~~l~~~l~~~~ 128 (320)
.-|++.|.|...-..-+.+...+.+. -+++.+|..|-=..+..........++ .++.++++.+
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 34455676654441333444443221 389999999853333221111111122 2455556554
Q ss_pred CCcEEEEEeCh-hHHHHHHHHHh
Q 020916 129 VDKCVLVGFSY-GGMVSFKVAEL 150 (320)
Q Consensus 129 ~~~~~lvGhS~-Gg~~a~~~a~~ 150 (320)
++-+|+|-|- ||.+.-.+...
T Consensus 105 -~ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 105 -KPTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred -CCCEEEEeCCCCCCCCHHHHHH
Confidence 4679999995 77666655543
No 303
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=39.53 E-value=57 Score=23.40 Aligned_cols=19 Identities=26% Similarity=0.146 Sum_probs=16.6
Q ss_pred CcEEEEEeChhHHHHHHHH
Q 020916 130 DKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a 148 (320)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4567889999999999998
No 304
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=38.48 E-value=1.7e+02 Score=21.91 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=27.3
Q ss_pred CCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecC
Q 020916 61 PSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d 97 (320)
+.++.+|++-|+.++....- ..+.+.|.+. ++++..|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 46789999999998876222 3344666666 9999998
No 305
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=38.47 E-value=58 Score=25.57 Aligned_cols=20 Identities=25% Similarity=0.159 Sum_probs=17.7
Q ss_pred EEEEeChhHHHHHHHHHhCc
Q 020916 133 VLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p 152 (320)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 88999999999999997653
No 306
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=38.35 E-value=61 Score=25.19 Aligned_cols=69 Identities=20% Similarity=0.106 Sum_probs=45.1
Q ss_pred CCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH-HHHHHHHHhC-CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ-CLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~l~~~l~~~~-~~~~~lvGh 137 (320)
+.|+||++.|+.+++. ..-..+...|... ++|.++..| +.++... -+-.+-..+. .+.+.|+=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p------------t~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP------------SDRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 4699999999987665 3567788888888 999988765 1222222 2344445553 356888777
Q ss_pred ChhHH
Q 020916 138 SYGGM 142 (320)
Q Consensus 138 S~Gg~ 142 (320)
|+=+-
T Consensus 97 SwY~~ 101 (230)
T TIGR03707 97 SWYNR 101 (230)
T ss_pred chhhh
Confidence 76433
No 307
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=37.93 E-value=1.5e+02 Score=22.76 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=22.9
Q ss_pred CCCeEEEEcCCCCCcccc--H-HHHHHHhhcc-ceEEecCC
Q 020916 62 SKPVVVLVHGFAAEGIVT--W-QFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~--~-~~~~~~l~~~-~~vi~~d~ 98 (320)
.++.|.||+-.+.+.. . | ....+.|.+. ..+..+++
T Consensus 31 ~~~~i~FIPtAs~~~~-~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSE-DDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccc-hHHHHHHHHHHHHHcCCeeeeeec
Confidence 4679999998887766 2 2 2334556555 66665554
No 308
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=37.84 E-value=64 Score=25.16 Aligned_cols=37 Identities=11% Similarity=-0.078 Sum_probs=22.7
Q ss_pred CCCeEEEEcCCCCC--ccccH-HHHHHHhhcc-ceEEecCCC
Q 020916 62 SKPVVVLVHGFAAE--GIVTW-QFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 62 ~~~~vv~lhG~~~~--~~~~~-~~~~~~l~~~-~~vi~~d~~ 99 (320)
.+|.|+||+-.+.. .. .| +.+.+.|.+. +.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~-~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWD-DYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHH-HHHHHHHHHHHHCCCEEEEeccc
Confidence 46789999987743 33 33 3344555554 777777654
No 309
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.86 E-value=52 Score=26.96 Aligned_cols=22 Identities=27% Similarity=0.401 Sum_probs=18.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+..+..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999999887765
No 310
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=36.29 E-value=2.3e+02 Score=22.80 Aligned_cols=62 Identities=8% Similarity=0.024 Sum_probs=40.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEE-EeChhHHHHHHHHHhCcc-ccccEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLV-GFSYGGMVSFKVAELYPN-LVQAMVV 160 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lv-GhS~Gg~~a~~~a~~~p~-~v~~lvl 160 (320)
+.++.+|.+|..... ....+.+.++++......++|+ .-++++.-+...+..+.. .+.++|+
T Consensus 155 ~D~ViIDt~Gr~~~~--------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 155 VDYILIDTAGKNYRA--------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCEEEEECCCCCcCC--------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 899999998864322 3345556666665555455554 456778788778777643 4667665
No 311
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.03 E-value=57 Score=24.26 Aligned_cols=31 Identities=19% Similarity=0.181 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
...+.-.+..++.+.++++|||-=|.+...+
T Consensus 68 ~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 68 LSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 4556667788999999999999977766655
No 312
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=35.81 E-value=21 Score=28.37 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=14.4
Q ss_pred CCcEEEEEeChhHHHHHHH
Q 020916 129 VDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~ 147 (320)
...++++|||+|..=...+
T Consensus 234 i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 234 IDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CCEEEEEeCCCchhhHHHH
Confidence 4679999999997654443
No 313
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=35.67 E-value=65 Score=25.34 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=17.5
Q ss_pred EEEEEeChhHHHHHHHHHhCc
Q 020916 132 CVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p 152 (320)
-.+.|-|.|+.+|..++...+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 348999999999999987643
No 314
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=34.65 E-value=1.5e+02 Score=21.36 Aligned_cols=56 Identities=21% Similarity=0.052 Sum_probs=33.6
Q ss_pred HHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHH
Q 020916 82 FQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKV 147 (320)
Q Consensus 82 ~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~ 147 (320)
.+...+.+.-.|++.|.+|--.| -+.+++.+..+ +..| +. .++||-|.|=.-++..
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~~s--------Se~fA~~l~~~-~~~G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKALS--------SEEFADFLERL-RDDG-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCcCC--------hHHHHHHHHHH-HhcC-CeEEEEEeCcccCCHHHHH
Confidence 34556666678999999875333 34444444433 3334 44 5678999886555544
No 315
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=34.44 E-value=51 Score=18.21 Aligned_cols=26 Identities=12% Similarity=0.264 Sum_probs=22.4
Q ss_pred CChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 111 RSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
+..+.+..|+...|..+.+..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEecc
Confidence 56778889999999999888888887
No 316
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=34.17 E-value=72 Score=25.22 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=18.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999987654
No 317
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=34.08 E-value=32 Score=26.65 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=26.9
Q ss_pred CCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 62 SKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
..|+||++.|+.+++. ..-..+...|... ++|.++..|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4569999999988776 3445666777777 999998876
No 318
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=34.06 E-value=1.1e+02 Score=27.51 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=31.4
Q ss_pred HHHHHHHHHHh--CCCcEEEEEe------ChhHHHHHHHHHhCccccccEEEecccc
Q 020916 117 AQCLATGLAKL--GVDKCVLVGF------SYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 117 ~~~l~~~l~~~--~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
++.+...++.. ..++++++|| +.|+.+++..-+..-.+ .+.++++|.-
T Consensus 323 aRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 323 ARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 44554444333 2578999999 68999998776654443 5666666543
No 319
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.78 E-value=69 Score=21.80 Aligned_cols=31 Identities=23% Similarity=0.266 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020916 115 FQAQCLATGLAKLGVDKCVLVGFSYGGMVSF 145 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~ 145 (320)
.....+.-.+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3456677778888999999999987776553
No 320
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=32.93 E-value=2.9e+02 Score=22.99 Aligned_cols=33 Identities=21% Similarity=0.124 Sum_probs=22.8
Q ss_pred CChhHHHHHHHHHHHHhC-CCcEEEEEeChhHHH
Q 020916 111 RSPTFQAQCLATGLAKLG-VDKCVLVGFSYGGMV 143 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~Gg~~ 143 (320)
....+.++.+...++... ..+++|+=|+.=|..
T Consensus 117 ~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 117 KSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 345556666666666664 568999999987665
No 321
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=32.65 E-value=1e+02 Score=22.24 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=22.6
Q ss_pred CCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecC
Q 020916 63 KPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d 97 (320)
++.||++-|..++... .-..+.+.|.+. +.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 4679999999988771 223344556555 8888887
No 322
>PLN03006 carbonate dehydratase
Probab=32.63 E-value=63 Score=26.24 Aligned_cols=32 Identities=19% Similarity=0.305 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
....|.-.+.+++.+.|+|+|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 34567777888999999999999977666433
No 323
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=32.49 E-value=76 Score=25.05 Aligned_cols=22 Identities=14% Similarity=0.052 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHhCc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999987653
No 324
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.74 E-value=2.6e+02 Score=24.69 Aligned_cols=63 Identities=17% Similarity=0.137 Sum_probs=43.1
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC---------ccccccEEEe
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY---------PNLVQAMVVS 161 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~---------p~~v~~lvl~ 161 (320)
|.|+.+|-.|.-... ..+...+..+++.-.++.+..||--+=|.=++.-+..+ |..++++++.
T Consensus 467 fDVvLiDTAGR~~~~--------~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 467 FDVVLIDTAGRMHNN--------APLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred CCEEEEeccccccCC--------hhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 899999988754433 33456677778777788899999888777776555432 3346666653
No 325
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.96 E-value=79 Score=24.87 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=16.0
Q ss_pred EEEEEeChhHHHHHHHHH
Q 020916 132 CVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~ 149 (320)
-.+.|-|.|+.+|..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 378999999999999984
No 326
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=30.58 E-value=1.4e+02 Score=21.30 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
......+.-.+..++.+.++++||+-=|.+...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 44456666777888999999999999777775443
No 327
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=30.43 E-value=80 Score=31.34 Aligned_cols=23 Identities=35% Similarity=0.436 Sum_probs=18.9
Q ss_pred HHHHHHHHhCCCcEEEEEeChhH
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
.+.+++..+++.|-.+||||.|-
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GE 593 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGE 593 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccch
Confidence 45667778899999999999874
No 328
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=30.35 E-value=1.7e+02 Score=23.78 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=17.9
Q ss_pred CeEEEEcCCCCCccccHHHHH-HHhhc-c-ceEEecC
Q 020916 64 PVVVLVHGFAAEGIVTWQFQV-GALTK-K-YSVYIPD 97 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~-~~l~~-~-~~vi~~d 97 (320)
.-||+.|| ++. ....+. ..-.+ + |+|+..+
T Consensus 163 nEviLT~g---~Sr-TV~~FL~~A~kk~Rkf~viVaE 195 (353)
T KOG1465|consen 163 NEVILTLG---SSR-TVENFLKHAAKKGRKFRVIVAE 195 (353)
T ss_pred CceEEecC---ccH-HHHHHHHHHHhccCceEEEEee
Confidence 45899999 344 444443 33333 3 8988766
No 329
>PRK10867 signal recognition particle protein; Provisional
Probab=30.15 E-value=3.8e+02 Score=23.45 Aligned_cols=62 Identities=18% Similarity=0.053 Sum_probs=38.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVV 160 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl 160 (320)
|.++.+|-+|....+ +...+.+..+.+......+++|--++-|.-+...+..+.+ .+.++|+
T Consensus 184 ~DvVIIDTaGrl~~d--------~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~giIl 247 (433)
T PRK10867 184 YDVVIVDTAGRLHID--------EELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVIL 247 (433)
T ss_pred CCEEEEeCCCCcccC--------HHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEEE
Confidence 899999999864322 3345555555555555666666666656666666655433 2566666
No 330
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=29.88 E-value=71 Score=23.05 Aligned_cols=50 Identities=16% Similarity=0.006 Sum_probs=27.6
Q ss_pred HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhH
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGG 141 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg 141 (320)
+...+.++-.+++.|-.|--. +-.++++.+..+... +..+ +++||-+.|=
T Consensus 60 il~~i~~~~~~i~Ld~~Gk~~--------sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERGKQL--------SSEEFAKKLERWMNQ-GKSDIVFIIGGADGL 110 (155)
T ss_dssp HHCTSHTTSEEEEE-TTSEE----------HHHHHHHHHHHHHT-TS-EEEEEE-BTTB-
T ss_pred HHhhccCCCEEEEEcCCCccC--------ChHHHHHHHHHHHhc-CCceEEEEEecCCCC
Confidence 344455556788999887533 335556666555544 3333 6788999983
No 331
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=29.66 E-value=3.7e+02 Score=23.47 Aligned_cols=63 Identities=19% Similarity=0.058 Sum_probs=39.0
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEe
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVS 161 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~ 161 (320)
+.++.+|-+|....+ +...+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 183 ~DvVIIDTaGr~~~d--------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlT 247 (428)
T TIGR00959 183 FDVVIVDTAGRLQID--------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLT 247 (428)
T ss_pred CCEEEEeCCCccccC--------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEe
Confidence 889999998864322 3345556666666666666766666656666666655432 36666653
No 332
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=28.91 E-value=64 Score=24.61 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
......+.-.+..++.+.++++||+-=|++...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 445667777888999999999999998877766543
No 333
>PRK04148 hypothetical protein; Provisional
Probab=28.65 E-value=1.2e+02 Score=21.32 Aligned_cols=21 Identities=29% Similarity=0.237 Sum_probs=17.1
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.++..||-..|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 569999999888888888753
No 334
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=28.35 E-value=3.1e+02 Score=22.00 Aligned_cols=66 Identities=12% Similarity=0.046 Sum_probs=36.0
Q ss_pred hccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCcc--ccccEE
Q 020916 88 TKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPN--LVQAMV 159 (320)
Q Consensus 88 ~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 159 (320)
.+.|.++.+|-+|....+ ..+.+.+..+.+... ...+++|--+..|.-++..+..+-+ .+.++|
T Consensus 152 ~~~~D~ViIDT~G~~~~d--------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~I 223 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQNK--------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGII 223 (272)
T ss_pred HCCCCEEEEeCCCCCcch--------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCEEE
Confidence 344999999999875532 334455555554433 3445555444445444444444322 355666
Q ss_pred Ee
Q 020916 160 VS 161 (320)
Q Consensus 160 l~ 161 (320)
+-
T Consensus 224 lT 225 (272)
T TIGR00064 224 LT 225 (272)
T ss_pred EE
Confidence 53
No 335
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.00 E-value=92 Score=23.38 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
....+.-.+..++.+.++++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 355666778889999999999998776666553
No 336
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=27.87 E-value=1.9e+02 Score=19.24 Aligned_cols=75 Identities=19% Similarity=0.080 Sum_probs=44.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGh 137 (320)
..|.|||.--+..-+. .-..+...+...+.|+-+|...+|. ++...+..+ ....++|-|.
T Consensus 13 ~~~VVifSKs~C~~c~-~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~Gk 76 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCH-RAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGGK 76 (104)
T ss_pred cCCEEEEECCcCchHH-HHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECCE
Confidence 5678888764443333 3333444443347888888664332 333333333 3445778899
Q ss_pred ChhHHHHHHHHHhCc
Q 020916 138 SYGGMVSFKVAELYP 152 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p 152 (320)
+.||.--+.......
T Consensus 77 ~iGG~~dl~~lh~~G 91 (104)
T KOG1752|consen 77 FIGGASDLMALHKSG 91 (104)
T ss_pred EEcCHHHHHHHHHcC
Confidence 999988777666543
No 337
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.49 E-value=3.5e+02 Score=23.28 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=40.3
Q ss_pred Hhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccc--cccEEE
Q 020916 86 ALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVV 160 (320)
Q Consensus 86 ~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl 160 (320)
.+.+. |.||.+|-.|.-.. -..+-+.+.++.+.+..+.+++|=-+.=|.-|..-|..+.+. |.++|+
T Consensus 178 ~fKke~fdvIIvDTSGRh~q--------e~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIl 247 (483)
T KOG0780|consen 178 RFKKENFDVIIVDTSGRHKQ--------EASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVIL 247 (483)
T ss_pred HHHhcCCcEEEEeCCCchhh--------hHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEEE
Confidence 34444 88888887764222 234566677777777777776665555555566566555443 445544
No 338
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.36 E-value=3.3e+02 Score=21.92 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=36.3
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEec-CCCccc-ccCChHHHHHHHHHHHHh
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK-KAGHLV-HLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~-~~~~~~~~~~~i~~fl~~ 310 (320)
....+|+.++.|++ ...++..+.+| +.+++.++ +.|++. ..-.|++..+.|.+=.++
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P--~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~ 202 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETP--WAVFVPTKESLSRYSAKSPSMKKVKEELREAVKE 202 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCC--CceEEEEeeecCCCccccCCHHHHHHHHHHHHHH
Confidence 44678999999965 33455556667 88888776 445443 334566666666655543
No 339
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=27.13 E-value=2.2e+02 Score=20.64 Aligned_cols=59 Identities=12% Similarity=-0.092 Sum_probs=41.8
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
..++++..--|.-.+...++.+.+.+. +.++.+|--+|..+.-++...+.+.+..++.+
T Consensus 40 yD~i~lG~w~d~G~~d~~~~~fl~~l~--~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 40 YDLIFLGFWIDKGTPDKDMKEFLKKLK--GKKVALFGTAGAGPDSEYAKKILKNVEALLPK 98 (160)
T ss_pred CCEEEEEcCccCCCCCHHHHHHHHHcc--CCeEEEEEecCCCCchHHHHHHHHHHHHhhcc
Confidence 347788777787777788888888887 77788887666665555556666666666653
No 340
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=27.07 E-value=1.7e+02 Score=20.91 Aligned_cols=48 Identities=21% Similarity=0.161 Sum_probs=31.7
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++.++++..+.+.++++|-+....+..-+........+-.|+.++...
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 567778888999999999998766555443333233555565555543
No 341
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=26.79 E-value=3.2e+02 Score=23.53 Aligned_cols=81 Identities=16% Similarity=0.065 Sum_probs=46.0
Q ss_pred HHHHHhhcc-ceEEecCCCCCCCCCCCC---CC---CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc-
Q 020916 82 FQVGALTKK-YSVYIPDLLFFGGSITDE---AD---RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN- 153 (320)
Q Consensus 82 ~~~~~l~~~-~~vi~~d~~G~G~s~~~~---~~---~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~- 153 (320)
...+.+.+. +-|+-.|..++-.--... .. ..++.+.+++......-.....+|.|---||.+++..+++-|+
T Consensus 66 s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g~Gg~~A~asaaqSp~a 145 (456)
T COG3946 66 SRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPGQGGTLAYASAAQSPDA 145 (456)
T ss_pred chhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecCCCcHHHHHHHhhChhh
Confidence 445555555 888888877653322111 11 3344444444333322223457888999999999999887765
Q ss_pred ccccEEEec
Q 020916 154 LVQAMVVSG 162 (320)
Q Consensus 154 ~v~~lvl~~ 162 (320)
.+.+.+-++
T Consensus 146 tlag~Vsld 154 (456)
T COG3946 146 TLAGAVSLD 154 (456)
T ss_pred hhcCccCCC
Confidence 244444433
No 342
>PF15566 Imm18: Immunity protein 18
Probab=26.78 E-value=90 Score=17.60 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 113 PTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 113 ~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
+..+.+++..+......+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 3455666666666666677999999999864
No 343
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=26.53 E-value=71 Score=34.84 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+..+++..++.+-.++|||+|=+.|+.++.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 445567788889999999999998887763
No 344
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=26.45 E-value=73 Score=26.52 Aligned_cols=17 Identities=29% Similarity=0.423 Sum_probs=14.5
Q ss_pred EEEEeChhHHHHHHHHH
Q 020916 133 VLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~ 149 (320)
.++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 57999999998888774
No 345
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=26.24 E-value=2.1e+02 Score=19.18 Aligned_cols=74 Identities=18% Similarity=0.137 Sum_probs=47.0
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~Gg 141 (320)
.||.-|| . -+. .....++.+... -.+.++++. .+.+.+++.+.+.+.++.++ .+.+.++.-=.||
T Consensus 2 iii~sHG-~-~A~-g~~~~~~~i~G~~~~~i~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG-S-LAE-GLLESAEMILGEDQDNIEAVDLY---------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET-T-HHH-HHHHHHHHHHTSTCSSEEEEEET---------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc-H-HHH-HHHHHHHHHcCCCcccEEEEECc---------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 3 233 455555555444 367776654 12467888899999998886 4556666666666
Q ss_pred HHHHHHHHh
Q 020916 142 MVSFKVAEL 150 (320)
Q Consensus 142 ~~a~~~a~~ 150 (320)
.....++..
T Consensus 70 sp~n~a~~~ 78 (116)
T PF03610_consen 70 SPFNEAARL 78 (116)
T ss_dssp HHHHHHHHH
T ss_pred ccchHHHHH
Confidence 655555443
No 346
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.20 E-value=71 Score=23.35 Aligned_cols=21 Identities=24% Similarity=0.069 Sum_probs=16.8
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..-.+.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 445788999999999888765
No 347
>PLN02154 carbonic anhydrase
Probab=26.19 E-value=1.1e+02 Score=24.82 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
...+.-.+..++.+.++|+|||-=|.+...+.
T Consensus 153 ~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 153 NSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 45567777889999999999998666666553
No 348
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=26.06 E-value=2.2e+02 Score=20.61 Aligned_cols=51 Identities=25% Similarity=-0.017 Sum_probs=27.8
Q ss_pred HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHH
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGM 142 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~ 142 (320)
+...+...-.+|+.|-+|--.| -.++++.+....+ -+. +-+++||-+.|=.
T Consensus 60 il~~l~~~~~~i~LDe~Gk~~s--------S~~fA~~l~~~~~-~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 60 ILAALPKGARVIALDERGKQLS--------SEEFAQELERWRD-DGRSDVAFVIGGADGLS 111 (157)
T ss_pred HHhhCCCCCEEEEEcCCCCcCC--------HHHHHHHHHHHHh-cCCccEEEEEcCccccC
Confidence 3444554445888888765333 3455555554422 222 3366778777643
No 349
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=25.82 E-value=1.5e+02 Score=17.38 Aligned_cols=31 Identities=10% Similarity=0.029 Sum_probs=23.4
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+.+.+-++.++.-.|.++++.+.|.+|-+++
T Consensus 28 TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 28 TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 4444545467777889999999999998764
No 350
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=25.67 E-value=56 Score=28.24 Aligned_cols=39 Identities=23% Similarity=0.156 Sum_probs=24.3
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.++++.|+.||...... .+... ......+++|++|+.-+
T Consensus 378 nviFtNG~~DPW~~lgv----~~~~~-~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 378 NVIFTNGELDPWRALGV----TSDSS-DSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp SEEEEEETT-CCGGGS------S-SS-SSEEEEEETT--TTGGG
T ss_pred eEEeeCCCCCCcccccC----CCCCC-CCcccEEECCCeeeccc
Confidence 59999999999865542 22222 35667889999998654
No 351
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=25.65 E-value=3.7e+02 Score=21.85 Aligned_cols=15 Identities=33% Similarity=0.487 Sum_probs=10.0
Q ss_pred CcEEEEEeChhHHHH
Q 020916 130 DKCVLVGFSYGGMVS 144 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a 144 (320)
+-.+++|+|-=..+.
T Consensus 211 g~Pilvg~SRKsfig 225 (282)
T PRK11613 211 NLPLLVGMSRKSMIG 225 (282)
T ss_pred CCCEEEEecccHHHH
Confidence 457899999544443
No 352
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=25.34 E-value=1.2e+02 Score=27.94 Aligned_cols=45 Identities=22% Similarity=0.137 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCCCccc--cHHHHHHHhhcc---ceEEecCCCCCCCCC
Q 020916 61 PSKPVVVLVHGFAAEGIV--TWQFQVGALTKK---YSVYIPDLLFFGGSI 105 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~--~~~~~~~~l~~~---~~vi~~d~~G~G~s~ 105 (320)
.-+.++++|||.....-. .-..+...|... +..+.+---||+.+.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 346789999998865441 234455666654 555555555677665
No 353
>PRK15219 carbonic anhydrase; Provisional
Probab=24.89 E-value=58 Score=25.62 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
...+.-.+..++.+.++++|||-=|.+...+.
T Consensus 130 ~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~ 161 (245)
T PRK15219 130 LGSMEFACAVAGAKVVLVMGHTACGAVKGAID 161 (245)
T ss_pred hhHHHHHHHHcCCCEEEEecCCcchHHHHHHh
Confidence 45666777888999999999998776665543
No 354
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.84 E-value=61 Score=26.46 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=15.1
Q ss_pred EEEEeChhHHHHHHHHH
Q 020916 133 VLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~ 149 (320)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57799999999999875
No 355
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.33 E-value=1.5e+02 Score=24.25 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCC----CcEEEEEeC--hhHHHHHHHHHh
Q 020916 117 AQCLATGLAKLGV----DKCVLVGFS--YGGMVSFKVAEL 150 (320)
Q Consensus 117 ~~~l~~~l~~~~~----~~~~lvGhS--~Gg~~a~~~a~~ 150 (320)
...+.+++++.++ +++.++|.| +|..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5667788887753 579999997 899999988764
No 356
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=24.25 E-value=4.2e+02 Score=22.08 Aligned_cols=90 Identities=14% Similarity=0.025 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCCCCcc----ccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCC--------C--------CChhHHH-
Q 020916 61 PSKPVVVLVHGFAAEGI----VTWQFQVGALTKK--YSVYIPDLLFFGGSITDEA--------D--------RSPTFQA- 117 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~--------~--------~~~~~~~- 117 (320)
..+..|+|+-|....-. ..--.+...|... .+++++--+|.|.-..... . ..+...+
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 35677888888542211 1233455666663 6777777778776532110 0 1111111
Q ss_pred HHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHh
Q 020916 118 QCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 118 ~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
....-++.+... +.|+++|+|-|+..|--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 122223334433 579999999999999887754
No 357
>PLN02777 photosystem I P subunit (PSI-P)
Probab=24.15 E-value=44 Score=24.07 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=41.8
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
|++.........++..+++.+.-+... ++..++|.-.||.+++.+...-=+.|+.+=++.+
T Consensus 65 ge~s~~~~~~~~~ei~k~~~e~Wd~~E-dK~av~~l~~aaiVal~v~~~VL~AId~lPLlP~ 125 (167)
T PLN02777 65 GEAPAEVETTELPEIVKTVQEAWDKVE-DKYAVSSLAFAGVVALWGSAGMISAIDRLPLVPG 125 (167)
T ss_pred cCCCcccccccHHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 555544445566777888888877776 6788889999999999876543344555544443
No 358
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.00 E-value=71 Score=25.80 Aligned_cols=19 Identities=26% Similarity=0.492 Sum_probs=16.3
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 020916 133 VLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~ 151 (320)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6779999999999998643
No 359
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=23.92 E-value=1.2e+02 Score=24.87 Aligned_cols=32 Identities=6% Similarity=-0.125 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 118 ~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+.+.++++.+.....-++|-|+|+.+++.+..
T Consensus 122 ~El~~i~~w~~~~~~s~LgICwGaQa~a~alg 153 (302)
T PRK05368 122 DELKEILDWAKTHVTSTLFICWAAQAALYHLY 153 (302)
T ss_pred HHHHHHHHHHHHcCCCEEEEcHHHHHHHHHcC
Confidence 33555555554335678999999999987764
No 360
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=23.78 E-value=1.1e+02 Score=28.63 Aligned_cols=22 Identities=32% Similarity=0.308 Sum_probs=18.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+..--++.|.|.||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4445678899999999998885
No 361
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.63 E-value=73 Score=26.60 Aligned_cols=18 Identities=22% Similarity=0.191 Sum_probs=15.6
Q ss_pred EEEEeChhHHHHHHHHHh
Q 020916 133 VLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~ 150 (320)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 567999999999999863
No 362
>PRK05665 amidotransferase; Provisional
Probab=23.59 E-value=1.6e+02 Score=23.05 Aligned_cols=35 Identities=26% Similarity=0.122 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
..+...+.++++..-...+-++|.|+|..+....+
T Consensus 74 ~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 74 DPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred chHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 34566666777655333456889999998876665
No 363
>PLN02748 tRNA dimethylallyltransferase
Probab=23.59 E-value=5.2e+02 Score=22.90 Aligned_cols=75 Identities=15% Similarity=0.024 Sum_probs=45.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecC----CCCC--CCCCC-----------------CCCCCChhH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPD----LLFF--GGSIT-----------------DEADRSPTF 115 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d----~~G~--G~s~~-----------------~~~~~~~~~ 115 (320)
..++.+|+|-|-.++.. ..++..|++. ..||..| ++|. |.... +...++...
T Consensus 19 ~~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 35566888888877766 3455566665 5677777 2332 11111 224578888
Q ss_pred HHHHHHHHHHHhC--CCcEEEEEeC
Q 020916 116 QAQCLATGLAKLG--VDKCVLVGFS 138 (320)
Q Consensus 116 ~~~~l~~~l~~~~--~~~~~lvGhS 138 (320)
+.++...+|+.+. .+-.+|||-|
T Consensus 96 F~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcCh
Confidence 8888888888762 2335666644
No 364
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=23.50 E-value=2.5e+02 Score=24.10 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=29.3
Q ss_pred cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 90 KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 90 ~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
.|.||.+|.|.++.|.... ..-..++.+-+...++-+..+-+.++--+.+
T Consensus 290 ~fDlIilDPPsF~r~k~~~-~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~ 339 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE-FSAQRDYKDLNDLALRLLAPGGTLVTSSCSR 339 (393)
T ss_pred cccEEEECCcccccCcccc-hhHHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 3999999999999987543 2222333444444445555444555544433
No 365
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=23.27 E-value=3.5e+02 Score=20.78 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=22.7
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCC
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG 289 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 289 (320)
+++|.|..|+..+.+..+.+.+...+.+.++.++|-++
T Consensus 2 l~~iGGg~~~~~~~~i~~~~~~~ag~~~~~i~~iptA~ 39 (217)
T cd03145 2 LVLIGGAEDKYDNRAILQRFVARAGGAGARIVVIPAAS 39 (217)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHcCCCCCcEEEEeCCC
Confidence 56666666655555666666665543456677776544
No 366
>PRK07053 glutamine amidotransferase; Provisional
Probab=23.19 E-value=3.7e+02 Score=21.01 Aligned_cols=32 Identities=9% Similarity=-0.045 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
...+.++++..-...+-++|.|+|..+....+
T Consensus 69 ~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 69 LAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 44555555544323456899999999887765
No 367
>PRK10437 carbonic anhydrase; Provisional
Probab=23.08 E-value=1.4e+02 Score=23.13 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
...+.-.+..++.+.++++||+-=|.+...+
T Consensus 78 ~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 78 LSVVQYAVDVLEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 4456666778899999999999877766655
No 368
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=23.01 E-value=1.2e+02 Score=18.36 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=14.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK 90 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~ 90 (320)
..|.++++||.... --+.++...++.
T Consensus 30 ~~~~~~lvhGga~~---GaD~iA~~wA~~ 55 (71)
T PF10686_consen 30 RHPDMVLVHGGAPK---GADRIAARWARE 55 (71)
T ss_pred hCCCEEEEECCCCC---CHHHHHHHHHHH
Confidence 34678888887622 223455544443
No 369
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=22.51 E-value=3.1e+02 Score=22.32 Aligned_cols=30 Identities=37% Similarity=0.519 Sum_probs=21.4
Q ss_pred CCCCeEEEEcCCCCCccccH-HHHHHHhhcc
Q 020916 61 PSKPVVVLVHGFAAEGIVTW-QFQVGALTKK 90 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~ 90 (320)
..+|+++++-|+.++....| .++..++...
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~ 46 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAK 46 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhc
Confidence 47788999999988776333 5566666665
No 370
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=22.47 E-value=55 Score=24.17 Aligned_cols=35 Identities=9% Similarity=-0.177 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
+-+.+.++++.....-...+|-|||+..|+.++.-
T Consensus 83 Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 83 YWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred hHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcC
Confidence 34456666666653446788999999999988743
No 371
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=22.21 E-value=3.6e+02 Score=20.59 Aligned_cols=39 Identities=18% Similarity=0.082 Sum_probs=32.0
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCC
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKA 288 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (320)
...|++++.|..+...+.+..+.+.+.+. +.=+..++..
T Consensus 52 ~~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~--~GGfl~~D~~ 90 (207)
T PF13709_consen 52 FFYPFLYWPGHGDFPLSDEEIANLRRYLE--NGGFLLFDDR 90 (207)
T ss_pred HhCCEEEEeCCCCCCCCHHHHHHHHHHHH--cCCEEEEECC
Confidence 35799999999999888899999999987 5566667654
No 372
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.15 E-value=1.6e+02 Score=23.24 Aligned_cols=18 Identities=28% Similarity=0.504 Sum_probs=15.9
Q ss_pred EEEEeChhHHHHHHHHHh
Q 020916 133 VLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~ 150 (320)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 577999999999999875
No 373
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=22.12 E-value=2.6e+02 Score=22.72 Aligned_cols=49 Identities=29% Similarity=0.344 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhCCCc---EEEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 115 FQAQCLATGLAKLGVDK---CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~~---~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
....-+..+++.++.++ +-=+|.++|+.+ ..+|.++..+|.|+.+....
T Consensus 56 AQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~~Q 107 (283)
T COG2230 56 AQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSEEQ 107 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCHHH
Confidence 34566777788887643 555899998874 55667776677777665443
No 374
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=21.86 E-value=4.1e+02 Score=21.97 Aligned_cols=53 Identities=21% Similarity=0.130 Sum_probs=37.1
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh-hHHHHHHHHHhC
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY-GGMVSFKVAELY 151 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~-Gg~~a~~~a~~~ 151 (320)
-+|+..|.+. ..++.+.+++.+.++++..+...++|+|+|. |--++-++|.+.
T Consensus 50 d~V~~~~~~~--------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 50 NHVWKLSGKP--------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred CEEEEecCcc--------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 4677766541 1256788888999988887644588888875 667777777653
No 375
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=21.84 E-value=4.3e+02 Score=21.25 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
-|.++|.--..--.. -.+.+.+.+.+. --++.+|+| -+..+++....+..+++.+.|+.-+..
T Consensus 95 ~Pivlm~Y~Npi~~~-Gie~F~~~~~~~GvdGlivpDLP--------------~ee~~~~~~~~~~~gi~~I~lvaPtt~ 159 (265)
T COG0159 95 VPIVLMTYYNPIFNY-GIEKFLRRAKEAGVDGLLVPDLP--------------PEESDELLKAAEKHGIDPIFLVAPTTP 159 (265)
T ss_pred CCEEEEEeccHHHHh-hHHHHHHHHHHcCCCEEEeCCCC--------------hHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 355555433222222 334455566555 788999988 344667888888888888888876655
Q ss_pred HHHHHHHH
Q 020916 141 GMVSFKVA 148 (320)
Q Consensus 141 g~~a~~~a 148 (320)
--..-..+
T Consensus 160 ~~rl~~i~ 167 (265)
T COG0159 160 DERLKKIA 167 (265)
T ss_pred HHHHHHHH
Confidence 44333333
No 376
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=21.80 E-value=2.7e+02 Score=20.19 Aligned_cols=53 Identities=19% Similarity=0.090 Sum_probs=36.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC-hhHHHHHHHHHhC
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS-YGGMVSFKVAELY 151 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS-~Gg~~a~~~a~~~ 151 (320)
-+|+.++.+. ...++.+.+++.+.++++..+ ..++|+|+| .|.-++-++|.+.
T Consensus 53 d~v~~~~~~~-------~~~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 53 DKVLVAEDPA-------LAHYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred CEEEEecChh-------hcccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 4666665432 123567788889999998876 467777765 5778888888765
No 377
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.50 E-value=1.5e+02 Score=20.92 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020916 115 FQAQCLATGLAKLGVDKCVLVGFSYGGMVSF 145 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~ 145 (320)
.....+.-.+..++.+.++++||+-=|.+..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 3455666777888999999999986555443
No 378
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=21.49 E-value=5e+02 Score=21.96 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=26.7
Q ss_pred EEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCC
Q 020916 66 VVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS 104 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s 104 (320)
|||+|...- . .|+.+++.|.+. +.|..+-..+.+..
T Consensus 2 il~~~~~~p--~-~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--G-QFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--h-hHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 788987643 3 789999999888 88877766655443
No 379
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=21.25 E-value=2.1e+02 Score=22.06 Aligned_cols=64 Identities=13% Similarity=0.026 Sum_probs=40.5
Q ss_pred HHHhhccceEEecCCCCCCCCCCCCCC--CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 84 VGALTKKYSVYIPDLLFFGGSITDEAD--RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 84 ~~~l~~~~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
++.+++...+=.+-.+=.|.|...... .+..+-++|+-+++.....+-.-+=|.|.|+.+.-.-
T Consensus 56 i~lyaecm~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~YQ 121 (277)
T KOG2316|consen 56 IDLYAECMGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDYQ 121 (277)
T ss_pred HHHHHHHhcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHHH
Confidence 455555544444433334555544433 4555678999999998875445788999999877543
No 380
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=21.19 E-value=1.2e+02 Score=24.13 Aligned_cols=41 Identities=15% Similarity=0.076 Sum_probs=27.4
Q ss_pred HHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCccccccEE
Q 020916 118 QCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMV 159 (320)
Q Consensus 118 ~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lv 159 (320)
.-+.++++.-. .++ .++|.|+|+.-+..+....+.+-.+++
T Consensus 28 GVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 28 GVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 33445553333 243 567999999999999988877655544
No 381
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.99 E-value=1.7e+02 Score=19.81 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=22.6
Q ss_pred cEEEEE-eChhHHHHHHHHHhCccccccEEEec
Q 020916 131 KCVLVG-FSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 131 ~~~lvG-hS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
++.|+| ..+.|.-.+.+...+|+ +.-+.+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578899 88888888888888875 44444333
No 382
>COG0218 Predicted GTPase [General function prediction only]
Probab=20.95 E-value=3.8e+02 Score=20.40 Aligned_cols=62 Identities=19% Similarity=0.240 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCCCcc-----ccHHHHH-HHhhcc----ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCc
Q 020916 62 SKPVVVLVHGFAAEGI-----VTWQFQV-GALTKK----YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-----~~~~~~~-~~l~~~----~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~ 131 (320)
++-.+|=++|+|-..- ..|..++ ++|..+ .-|+.+|.| |+ +...-..+.+++.+.++..
T Consensus 70 ~~~~lVDlPGYGyAkv~k~~~e~w~~~i~~YL~~R~~L~~vvlliD~r-~~----------~~~~D~em~~~l~~~~i~~ 138 (200)
T COG0218 70 DELRLVDLPGYGYAKVPKEVKEKWKKLIEEYLEKRANLKGVVLLIDAR-HP----------PKDLDREMIEFLLELGIPV 138 (200)
T ss_pred CcEEEEeCCCcccccCCHHHHHHHHHHHHHHHhhchhheEEEEEEECC-CC----------CcHHHHHHHHHHHHcCCCe
Confidence 4455677788775441 2555554 444443 456667765 11 1122235666666666543
Q ss_pred EEE
Q 020916 132 CVL 134 (320)
Q Consensus 132 ~~l 134 (320)
+++
T Consensus 139 ~vv 141 (200)
T COG0218 139 IVV 141 (200)
T ss_pred EEE
Confidence 333
No 383
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=20.90 E-value=65 Score=25.52 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
...+.-.+..++.+++.++|||.-|.++..+.
T Consensus 141 ~AalE~aV~~lkvenIiv~ghs~cgGik~~m~ 172 (276)
T KOG1578|consen 141 GAALEYAVTTLKVENIIVIGHSLCGGIKGLMS 172 (276)
T ss_pred cchHHHHHHHhccceEEEeccccCCchhhccc
Confidence 34566777888999999999999777766554
No 384
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=20.89 E-value=4.9e+02 Score=21.57 Aligned_cols=73 Identities=14% Similarity=0.016 Sum_probs=40.9
Q ss_pred HHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCcc
Q 020916 80 WQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPN 153 (320)
Q Consensus 80 ~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~ 153 (320)
+..+...+.+.|.++.+|-+|..... ..+.+.+..+.+.. .....++|-.+.-|.-++.-+..+-+
T Consensus 186 ~~~l~~~~~~~~D~ViIDTaGr~~~~--------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~ 257 (318)
T PRK10416 186 FDAIQAAKARGIDVLIIDTAGRLHNK--------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHE 257 (318)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcCC--------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHh
Confidence 44444445556999999999875432 22333344433322 23346677777667766666655422
Q ss_pred --ccccEEE
Q 020916 154 --LVQAMVV 160 (320)
Q Consensus 154 --~v~~lvl 160 (320)
.+.++|+
T Consensus 258 ~~~~~giIl 266 (318)
T PRK10416 258 AVGLTGIIL 266 (318)
T ss_pred hCCCCEEEE
Confidence 3556654
No 385
>COG3621 Patatin [General function prediction only]
Probab=20.23 E-value=3.4e+02 Score=22.60 Aligned_cols=52 Identities=19% Similarity=0.101 Sum_probs=31.4
Q ss_pred ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC----CcEEEE-EeChhHHHHHHHHHhC
Q 020916 89 KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV----DKCVLV-GFSYGGMVSFKVAELY 151 (320)
Q Consensus 89 ~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lv-GhS~Gg~~a~~~a~~~ 151 (320)
.++++..+|=-|.-. .....+...|++..- +.+.++ |-|.||.+++.+|.-.
T Consensus 7 sk~rIlsldGGGvrG-----------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~k 63 (394)
T COG3621 7 SKYRILSLDGGGVRG-----------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGK 63 (394)
T ss_pred cceeEEEecCCcccc-----------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCC
Confidence 347777777433211 334445555555432 234554 8999999999998643
No 386
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=20.22 E-value=2.6e+02 Score=22.20 Aligned_cols=23 Identities=13% Similarity=0.414 Sum_probs=16.5
Q ss_pred EEEcCCCCCccccHHHHHHHhhc
Q 020916 67 VLVHGFAAEGIVTWQFQVGALTK 89 (320)
Q Consensus 67 v~lhG~~~~~~~~~~~~~~~l~~ 89 (320)
++.||...++...++..++.+.+
T Consensus 59 ~V~HG~tlts~i~f~~v~~~I~~ 81 (254)
T cd08633 59 IVHHGYTLTSKILFKDVIETINK 81 (254)
T ss_pred EEeeCCCcccCcCHHHHHHHHHH
Confidence 34799877666578888777665
No 387
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=20.17 E-value=1.5e+02 Score=23.45 Aligned_cols=83 Identities=18% Similarity=0.104 Sum_probs=44.3
Q ss_pred EEEEcCCCCCccccHHHHHHHhhc-----c---ceEEecCCCCCCCCCCCCCCCChhH---H------HHHHHHHHHHhC
Q 020916 66 VVLVHGFAAEGIVTWQFQVGALTK-----K---YSVYIPDLLFFGGSITDEADRSPTF---Q------AQCLATGLAKLG 128 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~~~l~~-----~---~~vi~~d~~G~G~s~~~~~~~~~~~---~------~~~l~~~l~~~~ 128 (320)
-|++.|.|...-..-+.+...+.+ . -+++.+|..|-=..+.......... + ..++.++++.++
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~k 106 (254)
T cd00762 27 KVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAAK 106 (254)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhhC
Confidence 345556665443133333333322 1 4899999998433322211000000 1 135666666554
Q ss_pred CCcEEEEEeCh-hHHHHHHHHHh
Q 020916 129 VDKCVLVGFSY-GGMVSFKVAEL 150 (320)
Q Consensus 129 ~~~~~lvGhS~-Gg~~a~~~a~~ 150 (320)
+-+|+|-|- ||.+.-.+...
T Consensus 107 --ptvlIG~S~~~g~ft~evv~~ 127 (254)
T cd00762 107 --PDFLIGVSRVGGAFTPEVIRA 127 (254)
T ss_pred --CCEEEEeCCCCCCCCHHHHHH
Confidence 679999998 88777666544
No 388
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.01 E-value=1.8e+02 Score=20.95 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSF 145 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~ 145 (320)
....+.-.+..++.+.++++|||-=|.+..
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 355666677888999999999999555444
Done!