Query 020917
Match_columns 320
No_of_seqs 135 out of 1918
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 10:05:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020917.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020917hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 8E-29 5.8E-33 206.3 19.5 164 48-302 5-176 (183)
2 d2adca2 d.58.7.1 (A:444-531) P 99.9 1.6E-21 1.1E-25 142.3 10.8 79 221-302 8-87 (88)
3 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.9 2.2E-21 1.6E-25 139.9 10.9 80 219-301 4-83 (83)
4 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 3E-21 2.2E-25 141.3 11.5 82 221-305 6-89 (90)
5 d1b7fa1 d.58.7.1 (A:123-204) S 99.8 2.7E-21 2E-25 139.1 10.3 76 223-301 2-81 (82)
6 d2cpza1 d.58.7.1 (A:383-484) C 99.8 6.4E-21 4.7E-25 142.8 12.3 83 220-305 15-101 (102)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.8 7.1E-21 5.2E-25 136.8 11.3 76 223-301 2-81 (82)
8 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 1.2E-20 8.5E-25 139.0 12.3 78 222-302 6-87 (93)
9 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 1.2E-20 8.7E-25 138.1 11.3 78 222-302 7-88 (90)
10 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.8 9.7E-21 7.1E-25 138.0 10.7 78 222-302 6-87 (88)
11 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 8.6E-21 6.3E-25 140.5 10.4 76 222-302 17-92 (96)
12 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3.3E-20 2.4E-24 136.5 12.9 78 222-302 10-89 (93)
13 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.8 1.4E-20 1E-24 138.6 10.7 78 222-302 8-89 (93)
14 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 1.6E-19 1.2E-23 142.9 17.6 78 222-302 41-122 (139)
15 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 1.3E-20 9.6E-25 134.7 10.0 74 225-301 2-79 (80)
16 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 4.3E-20 3.2E-24 136.5 12.7 79 221-302 12-91 (95)
17 d2cqba1 d.58.7.1 (A:1-89) Pept 99.8 1.6E-20 1.2E-24 137.1 9.0 77 223-302 5-85 (89)
18 d1whwa_ d.58.7.1 (A:) Probable 99.8 5.7E-20 4.2E-24 136.9 12.2 78 223-303 8-89 (99)
19 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 4.6E-20 3.3E-24 141.1 11.5 77 222-301 6-83 (114)
20 d1fxla2 d.58.7.1 (A:119-203) H 99.8 4.5E-20 3.3E-24 133.5 10.8 76 223-299 6-85 (85)
21 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 2.1E-20 1.5E-24 136.4 9.0 77 223-302 8-86 (89)
22 d2cpha1 d.58.7.1 (A:454-547) P 99.8 4.2E-20 3E-24 136.2 10.6 79 222-303 7-91 (94)
23 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 4.2E-20 3E-24 133.6 10.0 76 224-302 2-81 (85)
24 d1whya_ d.58.7.1 (A:) Putative 99.8 9.8E-20 7.1E-24 135.0 12.2 80 220-302 14-93 (97)
25 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 3.5E-20 2.6E-24 131.8 9.3 74 225-301 2-78 (78)
26 d2cpja1 d.58.7.1 (A:65-150) No 99.8 7.5E-20 5.4E-24 132.5 11.2 75 223-302 8-82 (86)
27 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1E-19 7.6E-24 135.0 12.1 74 222-302 14-88 (98)
28 d2cqca1 d.58.7.1 (A:109-191) A 99.8 5.8E-20 4.2E-24 132.3 10.1 73 221-296 7-83 (83)
29 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 6.3E-20 4.6E-24 132.7 10.3 74 226-302 1-81 (85)
30 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 1.2E-19 8.9E-24 131.2 11.6 77 222-299 5-85 (85)
31 d1wg1a_ d.58.7.1 (A:) Probable 99.8 8.3E-20 6.1E-24 132.9 10.1 77 223-305 5-81 (88)
32 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 9.1E-20 6.6E-24 129.9 10.0 74 222-302 4-77 (79)
33 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 9E-20 6.5E-24 133.4 9.7 81 223-306 5-89 (90)
34 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 2.9E-19 2.1E-23 133.9 12.2 84 223-310 10-97 (103)
35 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1.9E-19 1.4E-23 130.4 10.8 76 222-302 7-82 (86)
36 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.2E-19 8.9E-24 137.5 10.1 76 223-302 2-78 (109)
37 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.2E-19 9E-24 137.9 10.0 77 222-303 9-85 (111)
38 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 8.9E-20 6.5E-24 130.7 8.6 75 224-301 2-80 (81)
39 d2adba1 d.58.7.1 (A:177-284) P 99.8 9E-20 6.6E-24 138.0 8.8 80 222-302 6-85 (108)
40 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 5.1E-20 3.7E-24 131.6 6.7 74 224-302 2-76 (80)
41 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 9.8E-20 7.1E-24 133.4 8.3 78 222-302 2-84 (91)
42 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 4.6E-19 3.4E-23 128.9 11.7 78 220-302 5-84 (88)
43 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 1.6E-18 1.2E-22 130.0 14.8 78 220-302 12-91 (104)
44 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.9E-19 1.4E-23 129.6 8.6 74 226-302 1-79 (83)
45 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 2.1E-19 1.5E-23 135.0 9.2 77 223-302 8-88 (104)
46 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 6E-20 4.4E-24 137.5 5.9 80 220-302 15-98 (102)
47 d2adca2 d.58.7.1 (A:444-531) P 99.8 4.5E-19 3.3E-23 129.0 10.0 79 47-127 8-86 (88)
48 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.8E-19 1.3E-23 131.1 7.8 76 222-303 4-79 (88)
49 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 1.3E-18 9.3E-23 130.6 12.4 84 222-310 14-102 (104)
50 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 2.8E-19 2E-23 132.3 8.5 81 222-306 15-95 (96)
51 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 1.1E-18 8E-23 129.4 11.6 75 222-302 14-88 (98)
52 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 8E-19 5.8E-23 130.3 10.6 78 222-302 7-94 (98)
53 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 3.9E-19 2.8E-23 132.6 8.7 75 223-301 18-96 (101)
54 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 1E-18 7.3E-23 130.5 10.8 75 223-300 18-95 (101)
55 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 1.5E-18 1.1E-22 126.6 11.1 76 222-302 7-86 (90)
56 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.2E-18 9E-23 122.6 10.3 71 226-302 1-71 (75)
57 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 3E-19 2.2E-23 129.3 7.3 76 223-302 4-85 (86)
58 d3begb1 d.58.7.1 (B:121-207) S 99.8 1.5E-19 1.1E-23 131.2 5.5 73 224-302 1-73 (87)
59 d2cpea1 d.58.7.1 (A:353-453) R 99.8 1.5E-18 1.1E-22 129.5 10.6 79 221-302 6-96 (101)
60 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 2.8E-18 2E-22 125.2 11.2 80 47-129 6-87 (90)
61 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 3E-18 2.2E-22 127.2 11.4 77 221-302 16-95 (99)
62 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.5E-19 1.1E-23 132.4 3.9 77 222-302 12-91 (91)
63 d2cpza1 d.58.7.1 (A:383-484) C 99.8 2.7E-18 2E-22 128.3 11.0 81 47-130 16-100 (102)
64 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 2.9E-18 2.1E-22 123.7 10.8 76 223-302 6-84 (85)
65 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 3.8E-18 2.8E-22 125.3 11.3 81 45-128 7-89 (93)
66 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 2.9E-18 2.1E-22 123.4 10.4 75 223-301 6-84 (84)
67 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 2.6E-18 1.9E-22 123.4 10.2 74 47-126 6-82 (83)
68 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.7E-18 1.3E-22 125.8 9.3 77 48-130 4-80 (88)
69 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 2.4E-18 1.7E-22 128.6 10.3 76 223-302 20-99 (103)
70 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 7.9E-19 5.8E-23 124.2 7.0 72 224-299 1-76 (77)
71 d2cpia1 d.58.7.1 (A:101-189) E 99.7 1.1E-18 8E-23 127.1 7.7 72 223-297 8-89 (89)
72 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.7 4.1E-18 3E-22 125.1 10.6 76 47-129 7-90 (93)
73 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 4.9E-18 3.5E-22 120.8 10.7 73 223-299 2-78 (79)
74 d1b7fa1 d.58.7.1 (A:123-204) S 99.7 3E-18 2.2E-22 122.9 9.5 76 49-127 2-81 (82)
75 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.7 2.7E-18 2E-22 125.4 9.4 81 47-130 3-87 (90)
76 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.7 4.1E-18 3E-22 125.6 10.5 75 47-128 12-91 (95)
77 d2cqba1 d.58.7.1 (A:1-89) Pept 99.7 2.8E-18 2E-22 125.0 9.3 79 47-128 3-85 (89)
78 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 1.9E-18 1.4E-22 127.8 8.4 79 223-304 1-87 (96)
79 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 2.5E-18 1.8E-22 127.5 9.0 75 47-128 13-88 (98)
80 d1weza_ d.58.7.1 (A:) Heteroge 99.7 9.2E-18 6.7E-22 125.4 12.1 81 222-307 14-97 (102)
81 d2cpda1 d.58.7.1 (A:223-308) A 99.7 5.3E-18 3.9E-22 122.7 10.3 78 47-129 6-83 (86)
82 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.7 4.3E-18 3.1E-22 121.4 9.5 75 50-129 2-77 (80)
83 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.7 3.8E-18 2.8E-22 124.0 9.4 79 47-128 5-87 (88)
84 d1fxla1 d.58.7.1 (A:37-118) Hu 99.7 4.7E-18 3.4E-22 121.8 9.7 75 50-127 3-81 (82)
85 d2msta_ d.58.7.1 (A:) Neural R 99.7 2E-18 1.5E-22 121.6 7.5 71 225-299 1-75 (75)
86 d2cq0a1 d.58.7.1 (A:231-320) E 99.7 2.5E-18 1.8E-22 125.5 8.1 80 47-129 6-89 (90)
87 d2ghpa2 d.58.7.1 (A:41-115) U4 99.7 5.3E-18 3.8E-22 119.3 9.5 72 224-299 1-74 (75)
88 d2f9da1 d.58.7.1 (A:12-125) Pr 99.7 6E-18 4.3E-22 129.1 10.4 79 47-128 5-84 (114)
89 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.7 6.4E-18 4.6E-22 124.7 10.2 75 47-128 16-92 (96)
90 d2cpha1 d.58.7.1 (A:454-547) P 99.7 9.7E-18 7.1E-22 123.3 11.1 80 47-129 6-91 (94)
91 d1hd0a_ d.58.7.1 (A:) Heteroge 99.7 4.1E-18 3E-22 119.9 8.5 70 225-298 1-74 (75)
92 d2ghpa1 d.58.7.1 (A:116-196) U 99.7 6.7E-18 4.9E-22 120.7 9.7 75 50-127 2-80 (81)
93 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.7 6.6E-18 4.8E-22 124.0 9.8 79 47-128 5-87 (93)
94 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 7.8E-18 5.7E-22 122.4 10.1 76 222-302 7-85 (89)
95 d1weya_ d.58.7.1 (A:) Calcipre 99.7 3.6E-18 2.7E-22 127.8 8.5 76 222-302 4-84 (104)
96 d1cvja2 d.58.7.1 (A:91-179) Po 99.7 3E-18 2.2E-22 124.8 7.4 78 49-129 8-87 (89)
97 d1whwa_ d.58.7.1 (A:) Probable 99.7 2.1E-17 1.5E-21 122.7 12.3 77 47-130 6-90 (99)
98 d2cpja1 d.58.7.1 (A:65-150) No 99.7 6.3E-18 4.6E-22 122.2 9.0 75 48-129 7-83 (86)
99 d2adba1 d.58.7.1 (A:177-284) P 99.7 8.2E-18 6E-22 127.0 9.2 82 47-129 5-86 (108)
100 d1cvja1 d.58.7.1 (A:11-90) Pol 99.7 6.8E-18 4.9E-22 120.4 8.2 73 51-126 2-78 (80)
101 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 1.1E-17 8.2E-22 120.9 9.4 75 222-299 8-86 (86)
102 d2cpxa1 d.58.7.1 (A:291-392) R 99.7 8.4E-18 6.1E-22 125.6 8.9 80 47-129 16-99 (102)
103 d1whxa_ d.58.7.1 (A:) Probable 99.7 7.1E-18 5.2E-22 128.0 8.5 75 48-129 9-85 (111)
104 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.7 5.3E-17 3.8E-21 128.1 13.8 81 46-129 39-123 (139)
105 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 1.8E-17 1.3E-21 117.8 9.9 73 47-128 3-77 (79)
106 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.7 1.5E-17 1.1E-21 119.3 9.6 74 52-128 1-79 (83)
107 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 3.3E-18 2.4E-22 119.5 5.8 67 226-295 1-71 (72)
108 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 2.3E-17 1.7E-21 115.9 10.2 70 52-128 1-71 (75)
109 d2adca1 d.58.7.1 (A:335-443) P 99.7 3.7E-17 2.7E-21 123.6 11.7 74 49-129 2-79 (109)
110 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 8.9E-18 6.5E-22 124.0 7.8 77 47-130 14-93 (96)
111 d2cqca1 d.58.7.1 (A:109-191) A 99.7 1.7E-17 1.2E-21 119.1 9.0 73 47-122 7-83 (83)
112 d1no8a_ d.58.7.1 (A:) Nuclear 99.7 2.5E-17 1.8E-21 116.7 9.7 73 51-126 2-77 (78)
113 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.7 3.6E-17 2.6E-21 121.1 10.9 76 47-129 6-95 (98)
114 d1x0fa1 d.58.7.1 (A:183-257) N 99.7 5.7E-18 4.1E-22 119.0 6.1 71 225-299 1-75 (75)
115 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.7 1.2E-17 8.6E-22 122.0 7.8 78 47-128 11-91 (91)
116 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 2.1E-17 1.6E-21 120.7 9.2 80 48-130 2-86 (91)
117 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 5.1E-17 3.7E-21 117.9 10.8 76 46-128 5-84 (88)
118 d1wg5a_ d.58.7.1 (A:) Heteroge 99.7 1.2E-16 8.9E-21 119.6 13.0 77 222-302 14-94 (104)
119 d2u2fa_ d.58.7.1 (A:) Splicing 99.7 2E-17 1.5E-21 119.3 8.2 76 50-128 2-81 (85)
120 d2cpfa1 d.58.7.1 (A:362-446) P 99.7 2.2E-17 1.6E-21 119.1 8.3 73 52-127 1-80 (85)
121 d1whya_ d.58.7.1 (A:) Putative 99.7 6.1E-17 4.4E-21 119.7 10.7 77 47-128 15-93 (97)
122 d1fxla2 d.58.7.1 (A:119-203) H 99.7 3.2E-17 2.3E-21 118.2 8.9 77 48-125 5-85 (85)
123 d1b7fa2 d.58.7.1 (A:205-289) S 99.7 4E-17 2.9E-21 117.6 9.2 77 48-125 5-85 (85)
124 d1x4ba1 d.58.7.1 (A:8-110) Het 99.7 2.6E-17 1.9E-21 122.9 8.4 78 48-129 19-100 (103)
125 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 3.6E-17 2.6E-21 122.6 8.9 80 47-130 13-96 (104)
126 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 6.8E-17 4.9E-21 119.6 10.2 76 47-129 13-89 (98)
127 d2cq4a1 d.58.7.1 (A:132-232) R 99.7 2E-17 1.5E-21 123.1 7.3 77 48-128 17-97 (101)
128 d2ghpa3 d.58.7.1 (A:206-291) U 99.7 3.7E-17 2.7E-21 118.1 8.0 77 48-128 3-85 (86)
129 d2cpea1 d.58.7.1 (A:353-453) R 99.7 4.8E-17 3.5E-21 121.1 8.9 79 47-128 6-96 (101)
130 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.7 4.2E-17 3.1E-21 121.5 7.3 78 47-127 16-96 (101)
131 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.7 9E-17 6.6E-21 115.5 8.7 76 47-126 4-83 (84)
132 d1p1ta_ d.58.7.1 (A:) Cleavage 99.7 1.2E-16 8.7E-21 119.6 9.7 79 48-129 7-89 (104)
133 d2cqda1 d.58.7.1 (A:1-103) RNA 99.7 2.1E-16 1.5E-20 118.0 10.9 78 48-129 9-90 (103)
134 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 3.4E-17 2.5E-21 118.8 6.3 75 47-130 3-80 (88)
135 d2msta_ d.58.7.1 (A:) Neural R 99.7 7.1E-17 5.2E-21 113.5 7.5 71 51-125 1-75 (75)
136 d2cqga1 d.58.7.1 (A:96-185) TA 99.7 1.1E-16 8.3E-21 116.4 8.7 77 47-128 6-86 (90)
137 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 4.8E-16 3.5E-20 116.3 12.2 77 46-129 12-92 (104)
138 d3begb1 d.58.7.1 (B:121-207) S 99.7 3.1E-17 2.3E-21 118.8 5.1 73 50-129 1-74 (87)
139 d1l3ka2 d.58.7.1 (A:103-181) N 99.7 2E-16 1.4E-20 112.3 9.3 73 49-125 2-78 (79)
140 d1uawa_ d.58.7.1 (A:) Musashi- 99.7 8.1E-17 5.9E-21 113.7 6.9 72 50-125 1-76 (77)
141 d1zh5a2 d.58.7.1 (A:105-189) L 99.7 1.6E-16 1.1E-20 114.4 8.4 75 48-126 5-82 (85)
142 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.6 2.7E-16 2E-20 116.5 9.9 78 45-129 14-96 (99)
143 d2disa1 d.58.7.1 (A:8-103) Hyp 99.6 1.6E-16 1.1E-20 117.2 8.3 81 49-130 1-87 (96)
144 d2cqpa1 d.58.7.1 (A:917-1002) 99.6 4.7E-16 3.4E-20 112.2 10.6 75 48-125 8-86 (86)
145 d1weza_ d.58.7.1 (A:) Heteroge 99.6 2.5E-16 1.8E-20 117.4 8.6 80 46-129 12-93 (102)
146 d2cpya1 d.58.7.1 (A:536-638) R 99.6 2.6E-16 1.9E-20 117.6 7.9 75 222-300 7-85 (103)
147 d1x4da1 d.58.7.1 (A:8-96) Matr 99.6 4.6E-16 3.4E-20 112.9 9.0 77 45-128 4-85 (89)
148 d2cq2a1 d.58.7.1 (A:25-125) Al 99.6 3.2E-16 2.3E-20 116.4 7.9 66 221-288 16-83 (101)
149 d1wg5a_ d.58.7.1 (A:) Heteroge 99.6 5.9E-16 4.3E-20 115.8 9.4 78 47-128 13-94 (104)
150 d1hd0a_ d.58.7.1 (A:) Heteroge 99.6 6.9E-16 5E-20 108.3 8.3 71 51-125 1-75 (75)
151 d2cpya1 d.58.7.1 (A:536-638) R 99.6 1.6E-15 1.1E-19 113.2 9.2 78 47-128 6-87 (103)
152 d2ghpa2 d.58.7.1 (A:41-115) U4 99.6 1.1E-15 7.9E-20 107.2 7.8 72 50-125 1-74 (75)
153 d1x0fa1 d.58.7.1 (A:183-257) N 99.6 7.7E-16 5.6E-20 107.9 6.6 67 51-125 1-75 (75)
154 d1u2fa_ d.58.7.1 (A:) Splicing 99.6 1.8E-17 1.3E-21 120.8 -2.2 73 224-300 2-83 (90)
155 d2dita1 d.58.7.1 (A:8-106) HIV 99.6 2.2E-15 1.6E-19 111.5 9.2 78 222-302 7-95 (99)
156 d1owxa_ d.58.7.1 (A:) Lupus LA 99.6 1.8E-15 1.3E-19 114.8 8.9 73 223-300 11-84 (113)
157 d2cpia1 d.58.7.1 (A:101-189) E 99.6 6.1E-16 4.4E-20 112.3 5.8 73 48-123 7-89 (89)
158 d1weya_ d.58.7.1 (A:) Calcipre 99.6 5.3E-16 3.9E-20 115.8 5.5 76 47-129 3-85 (104)
159 d1wela1 d.58.7.1 (A:412-523) R 99.6 1.6E-15 1.2E-19 114.9 8.3 75 222-300 17-95 (112)
160 d1u2fa_ d.58.7.1 (A:) Splicing 99.6 7.7E-17 5.6E-21 117.4 0.5 73 49-125 1-82 (90)
161 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=8e-29 Score=206.35 Aligned_cols=164 Identities=17% Similarity=0.286 Sum_probs=128.2
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
..|+|||+|||+++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|.+|+.. ++..+. ++.+.+.
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~---~~~~~~~ 80 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVD---GRVVEPK 80 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEET---TEECEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCccc---ccchhhh
Confidence 3489999999999999999999999944332222221 2359999999999999999984 455665 4666666
Q ss_pred EcccccccccCCccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 020917 124 MAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPA 203 (320)
Q Consensus 124 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
+.........
T Consensus 81 ~~~~~~~~~~---------------------------------------------------------------------- 90 (183)
T d1u1qa_ 81 RAVSREDSQR---------------------------------------------------------------------- 90 (183)
T ss_dssp ECCCTTGGGS----------------------------------------------------------------------
T ss_pred hhhhcccccc----------------------------------------------------------------------
Confidence 5432221110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHH
Q 020917 204 PVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHH 279 (320)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~ 279 (320)
.......++|||+|||..+|+++|+++|+.||.|..+.++.+.. +|||||+|.+.++|.+|+.
T Consensus 91 -------------~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~ 157 (183)
T d1u1qa_ 91 -------------PGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 157 (183)
T ss_dssp -------------TTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT
T ss_pred -------------cccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH
Confidence 00111367899999999999999999999999999999987533 7899999999999999996
Q ss_pred HhCCCeeCCCCCceeEEEeecCC
Q 020917 280 NLQGAVIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 280 ~lnG~~l~g~~~~~l~v~~ak~~ 302 (320)
++|..|.| +.|+|.||.++
T Consensus 158 -~~~~~~~G---~~i~V~~A~~k 176 (183)
T d1u1qa_ 158 -QKYHTVNG---HNCEVRKALSK 176 (183)
T ss_dssp -SSCEEETT---EEEEEEECCCH
T ss_pred -hCCCeECC---EEEEEEecCCc
Confidence 89999999 99999998654
No 2
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.6e-21 Score=142.29 Aligned_cols=79 Identities=27% Similarity=0.429 Sum_probs=73.9
Q ss_pred CCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeC-CCCCceeEEEee
Q 020917 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIP-SSGSVGMRIQYS 299 (320)
Q Consensus 221 ~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~-g~~~~~l~v~~a 299 (320)
+|+++|||+|||.++++++|+++|++||.|.++++..+.++|||||+|.+.++|.+|+..|||+.|. | +.|+|+|+
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g---~~l~v~~s 84 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGEN---HHLRVSFS 84 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSS---CBCEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCC---CEEEEEeC
Confidence 4689999999999999999999999999999998887777999999999999999999999999995 6 89999999
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
|+.
T Consensus 85 k~~ 87 (88)
T d2adca2 85 KST 87 (88)
T ss_dssp SSC
T ss_pred CCC
Confidence 975
No 3
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=2.2e-21 Score=139.86 Aligned_cols=80 Identities=35% Similarity=0.646 Sum_probs=72.9
Q ss_pred CCCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 219 ~~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
..+|+++|||+|||.++++++|+++|++||.|.++++++ ..+|||||+|.+.++|..|++.|||+.|.++ ++|+|+|
T Consensus 4 ~~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~-~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~--~~i~v~~ 80 (83)
T d2b0ga1 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP-NRHDIAFVEFTTELQSNAAKEALQGFKITPT--HAMKITF 80 (83)
T ss_dssp CCSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECT-TTCSCEEEEESSHHHHHHHHHHHTTCBSSTT--CBCEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeec-ccceeEEEecCCHHHHHHHHHHhCCcEeCCC--cEEEEEE
Confidence 345789999999999999999999999999999999985 4579999999999999999999999999643 7999999
Q ss_pred ecC
Q 020917 299 SKN 301 (320)
Q Consensus 299 ak~ 301 (320)
||.
T Consensus 81 akk 83 (83)
T d2b0ga1 81 AKK 83 (83)
T ss_dssp CCC
T ss_pred ecC
Confidence 984
No 4
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3e-21 Score=141.34 Aligned_cols=82 Identities=23% Similarity=0.436 Sum_probs=75.1
Q ss_pred CCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC--cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER--HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 221 ~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~--~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.+.++|||+|||.++|+++|+++|++||.|.+|++.++.. +|||||+|.+.++|..|++.|||..|.| +.|+|.|
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g---~~i~v~~ 82 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILG---KEVKVNW 82 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETT---EEEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECC---EEEEEEE
Confidence 3468999999999999999999999999999999986543 8899999999999999999999999999 9999999
Q ss_pred ecCCCCC
Q 020917 299 SKNPFGK 305 (320)
Q Consensus 299 ak~~~~~ 305 (320)
|+++-.+
T Consensus 83 a~~~~~~ 89 (90)
T d2cqia1 83 ATTPSSQ 89 (90)
T ss_dssp CCCTTCC
T ss_pred cCCCCCC
Confidence 9988443
No 5
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.85 E-value=2.7e-21 Score=139.11 Aligned_cols=76 Identities=17% Similarity=0.383 Sum_probs=71.3
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
+++|||+|||.++++++|+++|++||.|.++++.++.. +|||||+|.+.++|.+|++.|||..|.| +.|+|+|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g---~~l~v~~ 78 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRN---KRLKVSY 78 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETT---EECEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECC---EEEEEEE
Confidence 57899999999999999999999999999999987543 7899999999999999999999999999 9999999
Q ss_pred ecC
Q 020917 299 SKN 301 (320)
Q Consensus 299 ak~ 301 (320)
|++
T Consensus 79 a~p 81 (82)
T d1b7fa1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred cCC
Confidence 974
No 6
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.4e-21 Score=142.85 Aligned_cols=83 Identities=18% Similarity=0.325 Sum_probs=75.6
Q ss_pred CCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeE
Q 020917 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMR 295 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~ 295 (320)
.+++++|||+|||++++++||+++|++||.|.+++++.+.. +|||||+|.+.++|..||+.|||..|.| +.|+
T Consensus 15 ~p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g---~~i~ 91 (102)
T d2cpza1 15 GPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGM---KRLK 91 (102)
T ss_dssp CSTTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETT---EECE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECC---EEEE
Confidence 34578899999999999999999999999999999986543 7899999999999999999999999999 9999
Q ss_pred EEeecCCCCC
Q 020917 296 IQYSKNPFGK 305 (320)
Q Consensus 296 v~~ak~~~~~ 305 (320)
|+|++.+-.+
T Consensus 92 V~~a~~k~~~ 101 (102)
T d2cpza1 92 VQLKRSKNDS 101 (102)
T ss_dssp EECCCCSCCC
T ss_pred EEEeCCCCCC
Confidence 9999988443
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=7.1e-21 Score=136.85 Aligned_cols=76 Identities=20% Similarity=0.407 Sum_probs=71.1
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||.++++++|+++|++||.|.+++++++.. +|||||+|.+.++|..|++.|||..|.| +.|+|+|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g---~~l~v~~ 78 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT---KTIKVSY 78 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETT---EECEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEE
Confidence 46799999999999999999999999999999987533 7899999999999999999999999999 9999999
Q ss_pred ecC
Q 020917 299 SKN 301 (320)
Q Consensus 299 ak~ 301 (320)
|++
T Consensus 79 AkP 81 (82)
T d1fxla1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred eeC
Confidence 985
No 8
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.2e-20 Score=138.97 Aligned_cols=78 Identities=22% Similarity=0.352 Sum_probs=72.9
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
.+++|||+|||.++|+++|+++|++||.|.+|+++++.. +|||||+|.+.++|..|++.|||..|.| ++|+|+
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g---r~i~V~ 82 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDD---RIIRTD 82 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETT---EECEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECC---EEEEEE
Confidence 478999999999999999999999999999999987543 7899999999999999999999999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|+...
T Consensus 83 ~a~~~ 87 (93)
T d1h2vz_ 83 WDAGF 87 (93)
T ss_dssp EESCC
T ss_pred EcCCC
Confidence 99765
No 9
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.2e-20 Score=138.10 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=72.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
+.++|||+|||.++++++|+++|++||.|.+++++.+.. +|||||+|.+.++|.+|++.|||..|.| +.|+|+
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g---~~i~v~ 83 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH---LILNVE 83 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETT---EECEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECC---EEEEEE
Confidence 367899999999999999999999999999999987543 8899999999999999999999999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|++++
T Consensus 84 ~akp~ 88 (90)
T d2cq0a1 84 WAKPS 88 (90)
T ss_dssp ESSCC
T ss_pred eeeCC
Confidence 99865
No 10
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.83 E-value=9.7e-21 Score=137.96 Aligned_cols=78 Identities=19% Similarity=0.308 Sum_probs=72.5
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
.+++|||+|||.++|+++|+++|++||.|.+|+++++.. +|||||+|.+.++|.+|++.|||..|.| +.|+|+
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g---~~l~V~ 82 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMG---QTIQVD 82 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETT---EECEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECC---EEEEEE
Confidence 367999999999999999999999999999999987543 7899999999999999999999999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
||+++
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 99876
No 11
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=8.6e-21 Score=140.45 Aligned_cols=76 Identities=17% Similarity=0.339 Sum_probs=72.0
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
.+++|||+|||.++++++|+++|++||.|.+|++.+ ++|||||+|.+.++|..|++.|||..|.| +.|+|+|+|+
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~--~kg~afV~f~~~~~A~~Ai~~l~~~~i~g---~~l~v~~ak~ 91 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFP--EKGYSFVRFSTHESAAHAIVSVNGTTIEG---HVVKCYWGKE 91 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEET--TTTEEEEEESSHHHHHHHHHHHTTCEETT---EECEEECCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEe--cceEEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEcCC
Confidence 467999999999999999999999999999999985 47999999999999999999999999999 9999999987
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
.
T Consensus 92 ~ 92 (96)
T d1x4ga1 92 S 92 (96)
T ss_dssp C
T ss_pred C
Confidence 5
No 12
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=3.3e-20 Score=136.53 Aligned_cols=78 Identities=18% Similarity=0.360 Sum_probs=73.4
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC--cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER--HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~--~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
..++|||+|||.++++++|+++|++||.|.+|+++.+.. +|||||+|.+.++|.+|++.|||..|.| +.|+|+|+
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g---~~l~V~~A 86 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG---RKIEVNNA 86 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETT---EECEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECC---EEEEEEec
Confidence 357899999999999999999999999999999987654 8999999999999999999999999999 99999999
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
+++
T Consensus 87 ~~r 89 (93)
T d2cq3a1 87 TAR 89 (93)
T ss_dssp CSS
T ss_pred CcC
Confidence 886
No 13
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.4e-20 Score=138.59 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=72.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
..++|||+|||.++|++||+++|++||.|.+++|+++. .+|||||+|.+.++|..|++.|||..|.| +.|+|+
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g---~~l~V~ 84 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYG---KPIRVN 84 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSS---CBCEEE
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECC---EEEEEE
Confidence 46799999999999999999999999999999998653 28899999999999999999999999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
||+..
T Consensus 85 ~A~~~ 89 (93)
T d1x5ua1 85 KASAH 89 (93)
T ss_dssp ETTTT
T ss_pred EcCCC
Confidence 99876
No 14
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.83 E-value=1.6e-19 Score=142.86 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=73.0
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
..++|||+|||.++|+++|+++|++||.|.+|+|+++.. +|||||+|.+.++|..||+.|||..|.| +.|+|.
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~g---r~l~V~ 117 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILN---KRLKVA 117 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSS---CEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECC---EEEEEE
Confidence 457899999999999999999999999999999987643 7899999999999999999999999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|++..
T Consensus 118 ~a~~~ 122 (139)
T d1u6fa1 118 LAASG 122 (139)
T ss_dssp ESSCC
T ss_pred EcCCC
Confidence 99876
No 15
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.3e-20 Score=134.73 Aligned_cols=74 Identities=22% Similarity=0.350 Sum_probs=69.7
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
+|||+|||+++|+++|+++|++||.|.+++|+++.. +|||||+|.++++|..|++.|||..|.| ++|+|+|++
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~g---r~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKG---KPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETT---EECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECC---EEEEEEEeC
Confidence 599999999999999999999999999999997544 7899999999999999999999999999 999999996
Q ss_pred C
Q 020917 301 N 301 (320)
Q Consensus 301 ~ 301 (320)
.
T Consensus 79 ~ 79 (80)
T d1cvja1 79 R 79 (80)
T ss_dssp C
T ss_pred C
Confidence 3
No 16
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.3e-20 Score=136.45 Aligned_cols=79 Identities=16% Similarity=0.357 Sum_probs=72.8
Q ss_pred CCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC-cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER-HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 221 ~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~-~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
.++++|||+|||.++|++||+++|++||.|..+++.++.. ++||||+|.+.++|..||+.|||..|.| ++|+|+|+
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g---~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDG---YRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETT---EECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEec
Confidence 3467999999999999999999999999999999875433 8999999999999999999999999999 99999999
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
++.
T Consensus 89 ~~~ 91 (95)
T d1x4aa1 89 RSG 91 (95)
T ss_dssp CCC
T ss_pred cCC
Confidence 875
No 17
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.6e-20 Score=137.06 Aligned_cols=77 Identities=18% Similarity=0.346 Sum_probs=72.0
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||.++|+++|+++|++||.|.+++++.+.. +|||||+|.+.++|..|++.|||..|.| +.|+|+|
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g---~~l~v~~ 81 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFG---RTIRVNL 81 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETT---EEEEEEE
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECC---EEEEEEE
Confidence 68999999999999999999999999999999986433 8999999999999999999999999999 9999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
++++
T Consensus 82 a~p~ 85 (89)
T d2cqba1 82 AKPM 85 (89)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 9864
No 18
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=5.7e-20 Score=136.87 Aligned_cols=78 Identities=22% Similarity=0.251 Sum_probs=72.6
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||++++++||+++|++||.|.+++|+.+.. +|||||+|.+.++|.+||+.|||..|.| +.|+|.|
T Consensus 8 ~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~g---r~i~V~~ 84 (99)
T d1whwa_ 8 SGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQG---RMLHVLP 84 (99)
T ss_dssp CEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSS---CEEEEEE
T ss_pred CCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECC---EEEEEEE
Confidence 57899999999999999999999999999999976543 7899999999999999999999999999 9999999
Q ss_pred ecCCC
Q 020917 299 SKNPF 303 (320)
Q Consensus 299 ak~~~ 303 (320)
++.+-
T Consensus 85 a~~~~ 89 (99)
T d1whwa_ 85 STIKK 89 (99)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 98873
No 19
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.6e-20 Score=141.06 Aligned_cols=77 Identities=21% Similarity=0.323 Sum_probs=71.9
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC-cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER-HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~-~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
.+++|||+|||.++++++|+++|++||.|++|++..+.. +|||||+|.+.++|..|++.|||..|.| +.|+|.|++
T Consensus 6 ~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~g---r~l~V~~a~ 82 (114)
T d2f9da1 6 VNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCN---RYLVVLYYN 82 (114)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETT---EECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEcC
Confidence 368999999999999999999999999999999986543 8999999999999999999999999999 999999986
Q ss_pred C
Q 020917 301 N 301 (320)
Q Consensus 301 ~ 301 (320)
.
T Consensus 83 ~ 83 (114)
T d2f9da1 83 A 83 (114)
T ss_dssp H
T ss_pred C
Confidence 4
No 20
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.5e-20 Score=133.47 Aligned_cols=76 Identities=20% Similarity=0.350 Sum_probs=69.5
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
+++|||+|||.++|+++|+++|++||.|.+++++++.. +|||||+|.+.++|..|++.|||..+.|.. ++|+|.|
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~-~~i~V~~ 84 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAT-EPITVKF 84 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCS-SCCEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCC-EEEEEEe
Confidence 67899999999999999999999999999999987542 789999999999999999999999999732 5799999
Q ss_pred e
Q 020917 299 S 299 (320)
Q Consensus 299 a 299 (320)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 6
No 21
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=2.1e-20 Score=136.44 Aligned_cols=77 Identities=25% Similarity=0.349 Sum_probs=72.4
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC--cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER--HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~--~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
..+|||+|||.++++++|+++|++||.|.+++|+.+.+ +|||||+|.+.++|.+|++.|||..|.| +.|+|+|++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g---~~i~V~~a~ 84 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND---RKVFVGRFK 84 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETT---EEEEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECC---EEEEEEECC
Confidence 46799999999999999999999999999999987654 7999999999999999999999999999 999999998
Q ss_pred CC
Q 020917 301 NP 302 (320)
Q Consensus 301 ~~ 302 (320)
++
T Consensus 85 ~~ 86 (89)
T d1cvja2 85 SR 86 (89)
T ss_dssp CT
T ss_pred CC
Confidence 76
No 22
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=4.2e-20 Score=136.22 Aligned_cols=79 Identities=15% Similarity=0.319 Sum_probs=72.6
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC-----CcceEEEEEcCHHHHHHHHHHh-CCCeeCCCCCceeE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-----RHTVCFIEFEDVNSASSVHHNL-QGAVIPSSGSVGMR 295 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~-----~~g~aFV~F~~~~~A~~Al~~l-nG~~l~g~~~~~l~ 295 (320)
.+++|||+|||.++++++|+++|++||.|.+++|+++. .+|||||+|.+.++|.+|++.| ||..|.| ++|+
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~G---r~l~ 83 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYG---RRLV 83 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSS---CBCE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECC---EEEE
Confidence 46889999999999999999999999999999997542 2899999999999999999998 9999999 8999
Q ss_pred EEeecCCC
Q 020917 296 IQYSKNPF 303 (320)
Q Consensus 296 v~~ak~~~ 303 (320)
|+||+...
T Consensus 84 V~~A~~~~ 91 (94)
T d2cpha1 84 LEWADSEV 91 (94)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99998873
No 23
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.2e-20 Score=133.61 Aligned_cols=76 Identities=20% Similarity=0.396 Sum_probs=71.4
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
++|||+|||.++|+++|+++|++||.|.+++|+++.. +|||||+|.+.++|..|++.|||..|.| +.|+|+|+
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g---~~l~V~~A 78 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGD---KKLLVQRA 78 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSS---SCCEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEC
Confidence 5799999999999999999999999999999987543 8999999999999999999999999999 89999999
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
+..
T Consensus 79 ~~~ 81 (85)
T d2u2fa_ 79 SVG 81 (85)
T ss_dssp CCC
T ss_pred CCC
Confidence 865
No 24
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=9.8e-20 Score=135.03 Aligned_cols=80 Identities=16% Similarity=0.416 Sum_probs=72.7
Q ss_pred CCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
.+|+++|||+|||+++++++|+++|++||.|..+++.+ +++||||+|.+.++|..|++.|||..|.|.+ ++|+|+|+
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~--~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~-~~l~v~~a 90 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVK--GDSFAYIQYESLDAAQAACAKMRGFPLGGPD-RRLRVDFA 90 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECS--SSCCEEEEESSHHHHHHHHHHHTTCBCSSSS-CBCEEEEC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeec--cccEEEeccCCHHHHHHHHHHhCCCEeCCCc-eEEEEEeC
Confidence 34689999999999999999999999999999999974 5799999999999999999999999998742 58999999
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
+..
T Consensus 91 k~~ 93 (97)
T d1whya_ 91 KSG 93 (97)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 25
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=3.5e-20 Score=131.78 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=69.5
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
+|||+|||+++++++|+++|++||.|.++++..+.+ +|||||+|.+.++|..|++.|||..|.| ++|+|+|+.+
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g---~~l~V~~a~S 78 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG---RPMNIQLVTS 78 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETT---EECEEEEECC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEeeC
Confidence 599999999999999999999999999999986544 7899999999999999999999999999 9999999864
No 26
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=7.5e-20 Score=132.53 Aligned_cols=75 Identities=24% Similarity=0.377 Sum_probs=71.3
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecCC
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~~ 302 (320)
.++|||+|||.+++++||+++|++||.|.+|++.+ ++|||||+|.+.++|.+|++.|||..|.| +.|+|+||.+.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~--~k~~afV~f~~~~~A~~A~~~l~g~~i~g---~~l~V~~A~~~ 82 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHK--DKGFGFIRLETRTLAEIAKVELDNMPLRG---KQLRVRFACHS 82 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEET--TTTEEEEECSSSHHHHHHHHHHTTCCBTT---BCCEEEESSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeec--ccceEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEECCCc
Confidence 56899999999999999999999999999999974 57999999999999999999999999999 99999999887
No 27
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1e-19 Score=135.01 Aligned_cols=74 Identities=19% Similarity=0.347 Sum_probs=68.6
Q ss_pred CCCeEEEeCCC-CCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 222 PCNTLFIGNLG-ESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 222 ~~~~LfV~NL~-~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
.+++|||+||+ ..++++||+++|++||.|.+++|. +|||||+|.+.++|.+||+.|||+.|.| +.|+|+|++
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~----rg~aFV~f~~~~~A~~Ai~~lng~~~~g---~~l~V~~a~ 86 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVH----KGFAFVQYVNERNARAAVAGEDGRMIAG---QVLDINLAA 86 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEE----TEEEEEEESSHHHHHHHHHTTTTCEETT---EECEEEETT
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEe----CCeEEEEECCHHHHHHHHHHcCCCEECC---EEEEEEECC
Confidence 35789999997 578899999999999999999994 5999999999999999999999999999 999999998
Q ss_pred CC
Q 020917 301 NP 302 (320)
Q Consensus 301 ~~ 302 (320)
.+
T Consensus 87 ~~ 88 (98)
T d1wf2a_ 87 EP 88 (98)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 28
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.8e-20 Score=132.31 Aligned_cols=73 Identities=21% Similarity=0.339 Sum_probs=68.0
Q ss_pred CCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEE
Q 020917 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296 (320)
Q Consensus 221 ~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v 296 (320)
.++++|||+|||.++|+++|+++|++||.|.+++|+.+.. +|||||+|.+.++|..|++.|||..|.| +.|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g---r~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDG---RRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETT---EEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECC---EEeEC
Confidence 3578999999999999999999999999999999987543 7899999999999999999999999999 89987
No 29
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=6.3e-20 Score=132.72 Aligned_cols=74 Identities=27% Similarity=0.451 Sum_probs=68.9
Q ss_pred EEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC-------cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER-------HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 226 LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~-------~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
|||+|||.++|+++|+++|++||.|.+++|.++.. +|||||+|.+.++|.+|++.|||..|.| +.|+|+|
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g---~~i~V~~ 77 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDG---HKLEVRI 77 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETT---EECEEEC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEE
Confidence 89999999999999999999999999999986532 6899999999999999999999999999 9999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
++..
T Consensus 78 a~~~ 81 (85)
T d2cpfa1 78 SERA 81 (85)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 8754
No 30
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.81 E-value=1.2e-19 Score=131.18 Aligned_cols=77 Identities=17% Similarity=0.356 Sum_probs=70.1
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
.+++|||+|||.++++++|+++|++||.|.+++++++.. +|||||+|.+.++|.+|++.|||..+.|.+ ++|+|.
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~-~~l~V~ 83 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGS-QPLSVR 83 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCS-SCCEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCC-eEEEEE
Confidence 367899999999999999999999999999999987543 789999999999999999999999998642 789999
Q ss_pred ee
Q 020917 298 YS 299 (320)
Q Consensus 298 ~a 299 (320)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 96
No 31
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8.3e-20 Score=132.86 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=68.1
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecCC
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~~ 302 (320)
+++|||+|||.+++++||+++|++|| ++.+.+. ..+|||||+|.+.++|+.|++.|||+.|.| +.|+|+|+++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~~--~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G---~~l~V~~a~~~ 78 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYVD--RNKRTAFVTLLNGEQAQNAIQMFHQYSFRG---KDLIVQLQPTD 78 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEEE--GGGTEEEECCSCHHHHHHHHHHHTTEEETT---EEEEEEECCCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeeee--ccCCceEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEcCCC
Confidence 67899999999999999999999999 3444443 457999999999999999999999999999 99999999877
Q ss_pred CCC
Q 020917 303 FGK 305 (320)
Q Consensus 303 ~~~ 305 (320)
...
T Consensus 79 ~~~ 81 (88)
T d1wg1a_ 79 ALL 81 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 32
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9.1e-20 Score=129.95 Aligned_cols=74 Identities=22% Similarity=0.384 Sum_probs=68.7
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
.+++|||+||+ +|+++|+++|++||.|.++++.+ .+|||||+|.+.++|..|++.|||..|.| +.|+|+|++.
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~--~~~~afV~f~~~~~A~~Ai~~lng~~~~g---~~l~V~~a~~ 76 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDP--PRNCAFVTYEKMESADQAVAELNGTQVES---VQLKVNIARK 76 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEET--TTTEEEEECSSHHHHHHHHHHHTTCBCSS---CBCEEEECCS
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeecc--CCCEEEEEEcccHHHHHHHHHhCCCEECC---EEEEEEEecC
Confidence 47899999995 89999999999999999999974 57999999999999999999999999999 8999999975
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
+
T Consensus 77 ~ 77 (79)
T d2bz2a1 77 Q 77 (79)
T ss_dssp S
T ss_pred C
Confidence 4
No 33
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=9e-20 Score=133.38 Aligned_cols=81 Identities=21% Similarity=0.407 Sum_probs=73.7
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
..+|||+|||+++++++|+++|++||.|..+.++.+.. +|||||+|.++++|..|++.|||+.|.| +.|+|+|
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g---~~l~V~~ 81 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDG---RQIRVDQ 81 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTS---CCCEEEE
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECC---EEEEEEE
Confidence 57899999999999999999999999999998875433 8899999999999999999999999999 9999999
Q ss_pred ecCCCCCC
Q 020917 299 SKNPFGKR 306 (320)
Q Consensus 299 ak~~~~~~ 306 (320)
+.++-.+|
T Consensus 82 a~~~~~~r 89 (90)
T d1x5sa1 82 AGKSSDNR 89 (90)
T ss_dssp EECCCCCC
T ss_pred cCCCCCCC
Confidence 98875443
No 34
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.9e-19 Score=133.87 Aligned_cols=84 Identities=15% Similarity=0.216 Sum_probs=74.4
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||..++++||+++|++||.|.+|+|+.+. .+|||||+|.+.++|.+|++.+|+ .|.| +.|+|.|
T Consensus 10 ~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~G---r~l~V~~ 85 (103)
T d2cqda1 10 FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDG---RKANVNL 85 (103)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETT---EECEEEE
T ss_pred CcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCC---EEEEEEE
Confidence 5789999999999999999999999999999998654 389999999999999999999887 7998 9999999
Q ss_pred ecCCCCCCCCCC
Q 020917 299 SKNPFGKRKDGT 310 (320)
Q Consensus 299 ak~~~~~~~~~~ 310 (320)
+.....+|..+.
T Consensus 86 a~~~~~pr~~~~ 97 (103)
T d2cqda1 86 AYLGAKPRSLQT 97 (103)
T ss_dssp STTTCCCCCCCC
T ss_pred cCCCCCCCCCCC
Confidence 988755555443
No 35
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.9e-19 Score=130.43 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=70.9
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
..++|||+|||.++++++|+++|++||.|..+++.+ .+|||||+|.++++|..|++.|||..|.| +.|+|+|+++
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~--~rg~afV~f~~~~~A~~Ai~~l~~~~i~g---~~i~V~~akP 81 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK--IRDYAFVHFSNREDAVEAMKALNGKVLDG---SPIEVTLAKP 81 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE--CSSEEEEEESSHHHHHHHHHHHSSEEETT---EEEEEECCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc--ccEEEEEEeCCHHHHHHHHHHcCCCEECC---EEEEEEeccC
Confidence 468999999999999999999999999998888854 57999999999999999999999999999 9999999986
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
+
T Consensus 82 ~ 82 (86)
T d2cpda1 82 V 82 (86)
T ss_dssp C
T ss_pred C
Confidence 6
No 36
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.2e-19 Score=137.48 Aligned_cols=76 Identities=22% Similarity=0.348 Sum_probs=70.8
Q ss_pred CCeEEEeCCCC-CCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 223 CNTLFIGNLGE-SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 223 ~~~LfV~NL~~-~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
+++|||+||++ .+|+++|+++|++||.|.+|+|+++ .+|||||+|.++++|.+|++.|||..|.| +.|+|+|++.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~-~kg~afV~f~~~~~A~~ai~~lng~~l~g---~~l~v~~s~~ 77 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFN-KKENALVQMADGNQAQLAMSHLNGHKLHG---KPIRITLSKH 77 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCT-TSCCEEEEESCHHHHHHHHHHHTTCBCSS---SBCEEECCSC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEec-ccceEEEEECCHHHHHHHHHHhCCCEECC---EEEEEEECCC
Confidence 68999999965 5999999999999999999999874 47999999999999999999999999999 8999999986
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
.
T Consensus 78 ~ 78 (109)
T d2adca1 78 Q 78 (109)
T ss_dssp C
T ss_pred C
Confidence 6
No 37
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.2e-19 Score=137.90 Aligned_cols=77 Identities=14% Similarity=0.165 Sum_probs=71.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
.+++|||+|||.++++++|+++|++||.|..|.|. ..+|||||+|.+.++|.+||+.|||..|.| ++|+|+|++.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~--~~kg~afV~f~~~~~A~~A~~~lng~~~~g---r~l~v~~a~~ 83 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP--EGGITAIVEFLEPLEARKAFRHLAYSKFHH---VPLYLEWAPI 83 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC--SSSSCEEEEESCHHHHHHHHHHHTTCBSSS---SBCEEEEEET
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee--ccCceEEEEEcCHHHHHHHHHHHcCCccCC---CeEEEEECCC
Confidence 36899999999999999999999999999999885 467999999999999999999999999999 9999999977
Q ss_pred CC
Q 020917 302 PF 303 (320)
Q Consensus 302 ~~ 303 (320)
..
T Consensus 84 ~~ 85 (111)
T d1whxa_ 84 GV 85 (111)
T ss_dssp TT
T ss_pred Cc
Confidence 64
No 38
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.79 E-value=8.9e-20 Score=130.70 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=67.9
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
+||||+|||.++|+++|+++|++||.|..++++.+. .+|||||+|.+.++|.+|++.|||..|.| ++|+|+|+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g---~~i~V~~a 78 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEG---YTLVTKVS 78 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETT---EECEEEEC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECC---EEEEEEEc
Confidence 689999999999999999999999999887775432 28999999999999999999999999999 99999999
Q ss_pred cC
Q 020917 300 KN 301 (320)
Q Consensus 300 k~ 301 (320)
++
T Consensus 79 ~P 80 (81)
T d2ghpa1 79 NP 80 (81)
T ss_dssp CC
T ss_pred cC
Confidence 74
No 39
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9e-20 Score=137.97 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=73.6
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
+..+|||+||++++|+++|+++|++||.|.++++++++.+|+|||+|.+.++|..||+.|||..|.+. ++.|+|.|++.
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~-~~~l~v~~s~~ 84 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNA-CCTLRIDFSKL 84 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTT-CCCCEEEECSS
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccC-CcEEEEEecCC
Confidence 46789999999999999999999999999999999888899999999999999999999999999642 27999999987
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
.
T Consensus 85 ~ 85 (108)
T d2adba1 85 T 85 (108)
T ss_dssp C
T ss_pred c
Confidence 5
No 40
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.1e-20 Score=131.58 Aligned_cols=74 Identities=28% Similarity=0.436 Sum_probs=68.8
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCC-eeCCCCCceeEEEeecCC
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA-VIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~-~l~g~~~~~l~v~~ak~~ 302 (320)
++|||+|||.++|+++|+++|++||.|.++++.. .+|||||+|.+.++|.+|++.|||. .|.| ++|+|+|++++
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~--~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G---~~i~V~~a~~k 76 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL--KSGYAFVDYPDQNWAIRAIETLSGKVELHG---KIMEVDYSVSK 76 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE--ETTEEEECCSCHHHHHHHHHHHTTTCEETT---EECEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec--ccceEEEEECCHHHHHHHHHHhCCCeEECC---EEEEEEEcCCc
Confidence 4699999999999999999999999998888875 4699999999999999999999996 6999 99999999976
No 41
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9.8e-20 Score=133.42 Aligned_cols=78 Identities=33% Similarity=0.506 Sum_probs=70.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHH----hhccCCCeeEEEEEecC-CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEE
Q 020917 222 PCNTLFIGNLGESINEEELRG----LFSAQPGFKQMKVLRQE-RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~----~F~~~G~i~~v~i~~~~-~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v 296 (320)
|++||||+|||.+++++||++ +|++||.|.+|++.+.. .+|||||+|.+.++|..|++.|||..|.| +.|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g---~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYD---KPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETT---EECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECC---EEEEE
Confidence 589999999999999999864 68999999999986532 28999999999999999999999999999 99999
Q ss_pred EeecCC
Q 020917 297 QYSKNP 302 (320)
Q Consensus 297 ~~ak~~ 302 (320)
.||+.+
T Consensus 79 ~~ak~~ 84 (91)
T d1nu4a_ 79 QYAKTD 84 (91)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 999876
No 42
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=4.6e-19 Score=128.94 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=71.4
Q ss_pred CCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHh--CCCeeCCCCCceeEEE
Q 020917 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL--QGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~l--nG~~l~g~~~~~l~v~ 297 (320)
.+|+++|||+|||.++++++|+++|++||.|.++++.+ .+++|||+|.+.++|.+|++.| ++..|.| ++|+|+
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~--~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g---~~l~v~ 79 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLK--GKNQAFLELATEEAAITMVNYYSAVTPHLRN---QPIYIQ 79 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEET--TTTEEEEEESSHHHHHHHHHHHHHSCCEETT---EECEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccc--cceEEEEEeCCHHHHHHHHHHHccCCCccCC---CEEEEE
Confidence 45789999999999999999999999999999999974 4699999999999999999865 6789999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|++.+
T Consensus 80 ~sk~~ 84 (88)
T d2cq1a1 80 YSNHK 84 (88)
T ss_dssp ECSCS
T ss_pred ECCCC
Confidence 99876
No 43
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.6e-18 Score=130.02 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=70.7
Q ss_pred CCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHh--CCCeeCCCCCceeEEE
Q 020917 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL--QGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~l--nG~~l~g~~~~~l~v~ 297 (320)
.+++++|||+|||.++||+||+++|++||.|.++++.+ .+++|||+|.+.++|..|++.| ++..+.| ++|+|+
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~--~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g---~~l~v~ 86 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMP--FKRQALVEFENIDSAKECVTFAADVPVYIAG---QQAFFN 86 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEET--TTTEEEEEESSHHHHHHHHHHHHHSCCBSSS---SBCEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEe--cceeEEEEeCCHHHHHHHHHHHcCCCcEEee---EEEEEE
Confidence 34689999999999999999999999999999999974 5799999999999999999988 4566778 899999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|++..
T Consensus 87 ~s~~~ 91 (104)
T d1wexa_ 87 YSTSK 91 (104)
T ss_dssp ECSSS
T ss_pred EcCCC
Confidence 99886
No 44
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.9e-19 Score=129.57 Aligned_cols=74 Identities=26% Similarity=0.433 Sum_probs=67.3
Q ss_pred EEEeCCCCCCCHHHHHHhhccCCCeeEE-EEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 226 LFIGNLGESINEEELRGLFSAQPGFKQM-KVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 226 LfV~NL~~~~tee~L~~~F~~~G~i~~v-~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
|||+|||.++|++||+++|++||.|.++ +++++.. +|||||+|.+.++|..||+.|||..|.| ++|+|+|++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~g---r~l~v~~a~ 77 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCN---RPITVSYAF 77 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETT---EECEEEESC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECC---EEEEEEEec
Confidence 7999999999999999999999998664 6665432 7999999999999999999999999999 999999998
Q ss_pred CC
Q 020917 301 NP 302 (320)
Q Consensus 301 ~~ 302 (320)
++
T Consensus 78 ~k 79 (83)
T d1x5ta1 78 KK 79 (83)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 45
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.1e-19 Score=134.99 Aligned_cols=77 Identities=22% Similarity=0.411 Sum_probs=72.0
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||.++++++|+++|++||.|.+|+++++.. +|||||+|.+.++|..|++.|||..|.| +.|+|+|
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g---~~i~V~~ 84 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSG---RALRVDN 84 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSS---SCBEEEE
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECC---EEEEEEE
Confidence 47899999999999999999999999999999987653 7899999999999999999999999999 8999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
+..+
T Consensus 85 a~~~ 88 (104)
T d1p1ta_ 85 AASE 88 (104)
T ss_dssp TTCT
T ss_pred CCCC
Confidence 8765
No 46
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6e-20 Score=137.53 Aligned_cols=80 Identities=23% Similarity=0.307 Sum_probs=72.6
Q ss_pred CCCCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEec----CCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeE
Q 020917 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ----ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMR 295 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~----~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~ 295 (320)
..|+++|||+|||.++++++|+++|++||.|..+++..+ ..+|||||+|.+.++|..|++.|||..|.| ++|+
T Consensus 15 ~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g---~~l~ 91 (102)
T d2cpxa1 15 GEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYG---KILV 91 (102)
T ss_dssp CSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSS---CBCE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECC---EEEE
Confidence 346889999999999999999999999999888777643 348999999999999999999999999999 9999
Q ss_pred EEeecCC
Q 020917 296 IQYSKNP 302 (320)
Q Consensus 296 v~~ak~~ 302 (320)
|+|++++
T Consensus 92 V~~ak~k 98 (102)
T d2cpxa1 92 IEFGKNK 98 (102)
T ss_dssp EEECCCC
T ss_pred EEeCCCc
Confidence 9999986
No 47
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=4.5e-19 Score=129.02 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=66.8
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
+|+++|||+|||+++|+++|+++|+.|+.+...++.....+|||||+|.+.++|.+|+..|+|..+.. |+.|+|.|++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~--g~~l~v~~sk 85 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGE--NHHLRVSFSK 85 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSS--SCBCEEEECS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecC--CCEEEEEeCC
Confidence 46889999999999999999999999944433333333457999999999999999999999999853 8999999997
Q ss_pred c
Q 020917 127 K 127 (320)
Q Consensus 127 ~ 127 (320)
.
T Consensus 86 ~ 86 (88)
T d2adca2 86 S 86 (88)
T ss_dssp S
T ss_pred C
Confidence 5
No 48
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.8e-19 Score=131.11 Aligned_cols=76 Identities=20% Similarity=0.355 Sum_probs=69.5
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
.+++|||+|||.++|++||+++|++||.|.+|++.. ..+|||||+|.+.++|+.|+. ++..|.| +.|+|.|+++
T Consensus 4 ~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-~~~gfafV~f~~~~~a~~a~~--~~~~i~g---~~l~v~~a~~ 77 (88)
T d1wf0a_ 4 GSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-PFRAFAFVTFADDQIAQSLCG--EDLIIKG---ISVHISNAEP 77 (88)
T ss_dssp CCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-SCCSCCEEECSCHHHHHHTTT--CEEEETT---EEEEEECCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-ccCceEEEEECCHHHHHHHHh--CCCEECC---EEeEEEeCCC
Confidence 468999999999999999999999999999998864 458999999999999999984 8899999 9999999987
Q ss_pred CC
Q 020917 302 PF 303 (320)
Q Consensus 302 ~~ 303 (320)
+-
T Consensus 78 k~ 79 (88)
T d1wf0a_ 78 KH 79 (88)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 49
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.3e-18 Score=130.62 Aligned_cols=84 Identities=23% Similarity=0.383 Sum_probs=70.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC-----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~-----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v 296 (320)
|.++|||+|||+++|+++|+++|++|| |++++++.+. .+|||||+|.+.++|.+|+ .|||..|.| +.|+|
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~g---r~l~V 88 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGN---KRIRV 88 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETT---EECEE
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECC---EEEEE
Confidence 458999999999999999999999998 7888776533 2689999999999998776 699999999 99999
Q ss_pred EeecCCCCCCCCCC
Q 020917 297 QYSKNPFGKRKDGT 310 (320)
Q Consensus 297 ~~ak~~~~~~~~~~ 310 (320)
.|++.+-.++...+
T Consensus 89 ~~a~~~~~~~~~ps 102 (104)
T d1wi8a_ 89 DVADQAQDKDSGPS 102 (104)
T ss_dssp EECCCCCCCCCCCC
T ss_pred EECCCCCCCCCCCc
Confidence 99988744443333
No 50
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.77 E-value=2.8e-19 Score=132.32 Aligned_cols=81 Identities=25% Similarity=0.358 Sum_probs=72.3
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
+.++|||+|||.++|++||+++|++||.|..++.. ...+|||||+|.+.++|.+|++.|||..|.| ++|+|.|++.
T Consensus 15 ~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~-~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g---r~i~V~~a~~ 90 (96)
T d1fjca_ 15 AARTLLAKNLSFNITEDELKEVFEDALEIRLVSQD-GKSKGIAYIEFKSEADAEKNLEEKQGAEIDG---RSVSLYYTGE 90 (96)
T ss_dssp GGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEET-TEEEEEEEEEESSHHHHHHHHHHTTEEEETT---EEEEEEECSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeec-CccccEEEEEeCCHHHHHHHHHHcCCCEECC---EEEEEEEeCC
Confidence 47899999999999999999999999998877643 3448999999999999999999999999999 9999999998
Q ss_pred CCCCC
Q 020917 302 PFGKR 306 (320)
Q Consensus 302 ~~~~~ 306 (320)
+-+.|
T Consensus 91 k~~~r 95 (96)
T d1fjca_ 91 KGGTR 95 (96)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 74433
No 51
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.1e-18 Score=129.39 Aligned_cols=75 Identities=11% Similarity=0.074 Sum_probs=70.5
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKN 301 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~ 301 (320)
..++|||+|||.+++++||+++|++||.|+++++.+ +|||||+|.+.++|.+||+.|||..|.| +.|+|.|.+.
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~---~g~afV~f~~~~~a~~Ai~~lng~~~~g---~~i~v~~~~~ 87 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK---DGMGMVEYLRKEDMEYALRKLDDTKFRS---HEGETSYIRV 87 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET---TTEEEEEESSHHHHHHHHHHHSSEEEEC---TTSCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc---cceEEEEECCHHHHHHHHHHhCCCEeCC---eEEEEEEEec
Confidence 357899999999999999999999999999999864 5999999999999999999999999999 9999999977
Q ss_pred C
Q 020917 302 P 302 (320)
Q Consensus 302 ~ 302 (320)
.
T Consensus 88 ~ 88 (98)
T d1wg4a_ 88 Y 88 (98)
T ss_dssp E
T ss_pred C
Confidence 6
No 52
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=8e-19 Score=130.27 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=70.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhC------CCeeCCCCC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQ------GAVIPSSGS 291 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~ln------G~~l~g~~~ 291 (320)
.+++|||+|||.++|+++|+++|++||.|.++.+..+.. +|||||+|.+.++|.+||+.|| |..|.|
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g--- 83 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG--- 83 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS---
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC---
Confidence 468999999999999999999999999999999976543 7999999999999999999987 678888
Q ss_pred ceeEEEeecCC
Q 020917 292 VGMRIQYSKNP 302 (320)
Q Consensus 292 ~~l~v~~ak~~ 302 (320)
+.|+|+|++++
T Consensus 84 r~l~v~~a~~k 94 (98)
T d1x4ha1 84 RQLKVDLAVTR 94 (98)
T ss_dssp CEEEEECCCCC
T ss_pred EEEEEEECCCC
Confidence 89999999875
No 53
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.9e-19 Score=132.56 Aligned_cols=75 Identities=21% Similarity=0.398 Sum_probs=69.5
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||.++++++|+++|+.||.|.+|+|+++.. +|||||+|.+.++|.+|++ |||..|.| +.|+|.+
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G---~~l~V~~ 93 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLG---VPIIVQA 93 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETT---EEEEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECC---EEEEEEE
Confidence 57899999999999999999999999999999987533 8899999999999999994 99999999 9999999
Q ss_pred ecC
Q 020917 299 SKN 301 (320)
Q Consensus 299 ak~ 301 (320)
++.
T Consensus 94 a~~ 96 (101)
T d2cq4a1 94 SQA 96 (101)
T ss_dssp HHH
T ss_pred CCC
Confidence 864
No 54
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1e-18 Score=130.46 Aligned_cols=75 Identities=21% Similarity=0.304 Sum_probs=69.1
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
.++|||+|||.++++++|+++|++||.|..+++..+.+ +|||||+|.+.++|.+|++.|||+.|.| ++|+|.++
T Consensus 18 ~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~g---r~~~v~~~ 94 (101)
T d1x5oa1 18 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKT---PPGVSAPT 94 (101)
T ss_dssp TTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCC---CTTSCCCS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECC---cCCccCCC
Confidence 47899999999999999999999999999999886543 7899999999999999999999999999 89888776
Q ss_pred c
Q 020917 300 K 300 (320)
Q Consensus 300 k 300 (320)
+
T Consensus 95 ~ 95 (101)
T d1x5oa1 95 E 95 (101)
T ss_dssp S
T ss_pred C
Confidence 5
No 55
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.5e-18 Score=126.58 Aligned_cols=76 Identities=14% Similarity=0.200 Sum_probs=69.1
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
..++|||+|||+++|+++|+++|++||.|.+|+|+.+.. +|||||+|.+.++|.+||+.+| .|.| +.|+|.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~~--~l~G---r~i~v~ 81 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRH--MIDG---RWCDCK 81 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCE--EETT---EEEEEE
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcCC--ccCC---EEeEEE
Confidence 357899999999999999999999999999999987543 8999999999999999998554 8898 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
|++++
T Consensus 82 ~a~~k 86 (90)
T d2cqga1 82 LPNSK 86 (90)
T ss_dssp CCCTT
T ss_pred eCCCC
Confidence 99876
No 56
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=1.2e-18 Score=122.60 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=65.4
Q ss_pred EEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecCC
Q 020917 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 226 LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~~ 302 (320)
|||+|||.+++++||+++|++|| +..+++. ..+|+|||+|.+.++|.+|++.|||+.|.| ++|+|+|++..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~--~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g---~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVD--KYKGTAFVTLLNGEQAEAAINTFHQSRLRE---RELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEE--TTTTEEEEEESSHHHHHHHHHHHTTEESSS---CEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeec--ccceeEEEEECCHHHHHHHHHHhCCccCCC---CEEEEEEeCCC
Confidence 79999999999999999999999 6666664 568999999999999999999999999999 99999999765
No 57
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=3e-19 Score=129.31 Aligned_cols=76 Identities=16% Similarity=0.315 Sum_probs=67.6
Q ss_pred CCeEEEeCCCCCCC-HHHHHHhhccCCCeeEEEEEecC-----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEE
Q 020917 223 CNTLFIGNLGESIN-EEELRGLFSAQPGFKQMKVLRQE-----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296 (320)
Q Consensus 223 ~~~LfV~NL~~~~t-ee~L~~~F~~~G~i~~v~i~~~~-----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v 296 (320)
.++|||+|||.+++ +++|+++|++||.|.+++|..+. .+|||||+|.+.++|.+|++ |||..|.| +.|+|
T Consensus 4 ~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~g---r~l~V 79 (86)
T d2ghpa3 4 GREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGN---REISV 79 (86)
T ss_dssp TTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETT---EEEEE
T ss_pred CCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECC---EEEEE
Confidence 68999999999875 56799999999999999986432 27899999999999999995 99999999 99999
Q ss_pred EeecCC
Q 020917 297 QYSKNP 302 (320)
Q Consensus 297 ~~ak~~ 302 (320)
+|++.+
T Consensus 80 ~~a~~k 85 (86)
T d2ghpa3 80 SLADKK 85 (86)
T ss_dssp EECCCC
T ss_pred EEcCCC
Confidence 999864
No 58
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.5e-19 Score=131.24 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=67.7
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeecCC
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSKNP 302 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak~~ 302 (320)
++|||+|||.++++++|+++|++||.|.++++.+ +|||||+|.+.++|..||+.|||..|.| +.|+|.|++..
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~---~g~afV~f~~~~~a~~Ai~~l~g~~~~g---~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR---DGTGVVEFVRKEDMTYAVRKLDNTKFRS---HEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT---TSEEEEEESSHHHHHHHHHHHTTCBCCC---TTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhcccccccccc---cceeeEEeCCHHHHHHHHHHhCCCEECC---cEeEEeEEecC
Confidence 4699999999999999999999999999999864 3899999999999999999999999999 89999987544
No 59
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.5e-18 Score=129.52 Aligned_cols=79 Identities=11% Similarity=0.275 Sum_probs=69.2
Q ss_pred CCCCeEEEeCCCCCCCHHHHHHhhccCCCee--------EEEEEecC----CcceEEEEEcCHHHHHHHHHHhCCCeeCC
Q 020917 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFK--------QMKVLRQE----RHTVCFIEFEDVNSASSVHHNLQGAVIPS 288 (320)
Q Consensus 221 ~~~~~LfV~NL~~~~tee~L~~~F~~~G~i~--------~v~i~~~~----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g 288 (320)
..+++|||+|||.++|+++|+++|.+||.|. .+.+..+. .+|||||+|.++++|..||+.|||..|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 3578999999999999999999999999874 33443322 27899999999999999999999999999
Q ss_pred CCCceeEEEeecCC
Q 020917 289 SGSVGMRIQYSKNP 302 (320)
Q Consensus 289 ~~~~~l~v~~ak~~ 302 (320)
+.|+|+|++.+
T Consensus 86 ---r~i~V~~a~~~ 96 (101)
T d2cpea1 86 ---SKLKVSLARKK 96 (101)
T ss_dssp ---EECEEECSSCC
T ss_pred ---EEEEEEEcCCC
Confidence 99999999876
No 60
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.8e-18 Score=125.25 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=66.4
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
.+.++|||+|||.++|+++|+++|+.|+.+....+.. .+.+|||||+|.+.++|.+|++.|||..+. |+.|+|.|
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~---g~~i~v~~ 82 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKIL---GKEVKVNW 82 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEET---TEEEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEEC---CEEEEEEE
Confidence 4578999999999999999999999993332222221 134699999999999999999999999998 89999999
Q ss_pred ccccc
Q 020917 125 AKKNL 129 (320)
Q Consensus 125 a~~~~ 129 (320)
|+...
T Consensus 83 a~~~~ 87 (90)
T d2cqia1 83 ATTPS 87 (90)
T ss_dssp CCCTT
T ss_pred cCCCC
Confidence 97643
No 61
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=3e-18 Score=127.23 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=70.1
Q ss_pred CCCCeEEEeCCCCC-CCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHH--HhCCCeeCCCCCceeEEE
Q 020917 221 PPCNTLFIGNLGES-INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH--NLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 221 ~~~~~LfV~NL~~~-~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~--~lnG~~l~g~~~~~l~v~ 297 (320)
.++++|||+|||.+ +|+++|+++|++||.|.++++++ ++|+|||+|.+.++|..|++ .+|+..|.| +.|+|+
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~--~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~g---r~l~V~ 90 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMR--MKSQAFIEMETREDAMAMVDHCLKKALWFQG---RCVKVD 90 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEET--TTTEEEEECSSHHHHHHHHHHHHHSCCCSSS---SCCEEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEee--cCCcEEEEecchHHHHHHHHHHhcCCceECC---EEEEEE
Confidence 35789999999975 89999999999999999999974 57999999999999999998 578999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
||+.+
T Consensus 91 ~s~~~ 95 (99)
T d1x4fa1 91 LSEKY 95 (99)
T ss_dssp EECSC
T ss_pred EcCCc
Confidence 99765
No 62
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.75 E-value=1.5e-19 Score=132.37 Aligned_cols=77 Identities=19% Similarity=0.283 Sum_probs=69.2
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEec---CCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ---ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~---~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
...+|||+|||+++++++|+++|++||.|.+++|+.+ ..+|||||+|.+.++|.+||+ |||..|.| +.|+|.|
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g---~~i~V~~ 87 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFG---NEIKLEK 87 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETT---EEEEEEC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECC---EEEEEEe
Confidence 3578999999999999999999999999887777543 348999999999999999995 99999999 9999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
++.+
T Consensus 88 ak~k 91 (91)
T d1fjeb1 88 PKGR 91 (91)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 9874
No 63
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.7e-18 Score=128.29 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=67.7
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--e--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--K--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
++.++|||+|||+++|+++|+++|+.|+.+....+.. . ..||||||+|.+.++|.+|++.|||..|. |+.|+|
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~---g~~i~V 92 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIG---MKRLKV 92 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEET---TEECEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEEC---CEEEEE
Confidence 3467899999999999999999999995544333332 1 23599999999999999999999999998 899999
Q ss_pred EEcccccc
Q 020917 123 EMAKKNLF 130 (320)
Q Consensus 123 ~~a~~~~~ 130 (320)
+|++++..
T Consensus 93 ~~a~~k~~ 100 (102)
T d2cpza1 93 QLKRSKND 100 (102)
T ss_dssp ECCCCSCC
T ss_pred EEeCCCCC
Confidence 99987654
No 64
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-18 Score=123.74 Aligned_cols=76 Identities=11% Similarity=0.246 Sum_probs=70.2
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
.++|||+|||.++|+++|+++|+.||.|.+|++.++.+ +|||||+|.+.++|.+||+ ++|..|.| +.|+|.|+
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g---~~l~v~~~ 81 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKE---TDLLILFK 81 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETT---EECEEEEG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECC---EEEEEEEc
Confidence 57999999999999999999999999999999987554 7999999999999999995 89999999 99999998
Q ss_pred cCC
Q 020917 300 KNP 302 (320)
Q Consensus 300 k~~ 302 (320)
+..
T Consensus 82 ~dy 84 (85)
T d1zh5a2 82 DDY 84 (85)
T ss_dssp GGC
T ss_pred CCC
Confidence 754
No 65
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.8e-18 Score=125.29 Aligned_cols=81 Identities=14% Similarity=0.328 Sum_probs=67.1
Q ss_pred CCCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 45 ~~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.....++|||+|||+.+|+++|+++|+.|+.+....+.. .+.+|||||+|.+.++|.+|++.|||..|. |+.|+|
T Consensus 7 ~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~---g~~l~V 83 (93)
T d2cq3a1 7 SKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVE---GRKIEV 83 (93)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEET---TEECEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEEC---CEEEEE
Confidence 345577899999999999999999999994332222222 234799999999999999999999999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
+||+++
T Consensus 84 ~~A~~r 89 (93)
T d2cq3a1 84 NNATAR 89 (93)
T ss_dssp EECCSS
T ss_pred EecCcC
Confidence 999765
No 66
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-18 Score=123.42 Aligned_cols=75 Identities=17% Similarity=0.272 Sum_probs=68.9
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||.++|+++|+++|++||.|.+++|+.+.. +|||||+|.+.++|.+|++ ++|..|.| +.|+|..
T Consensus 6 ~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~G---r~i~V~~ 81 (84)
T d1l3ka1 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDG---RVVEPKR 81 (84)
T ss_dssp GGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETT---EECEEEE
T ss_pred CcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECC---EEEEEEe
Confidence 47899999999999999999999999999999987543 8999999999999999996 69999999 9999988
Q ss_pred ecC
Q 020917 299 SKN 301 (320)
Q Consensus 299 ak~ 301 (320)
|.+
T Consensus 82 A~s 84 (84)
T d1l3ka1 82 AVS 84 (84)
T ss_dssp CCC
T ss_pred eeC
Confidence 764
No 67
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.75 E-value=2.6e-18 Score=123.45 Aligned_cols=74 Identities=24% Similarity=0.354 Sum_probs=65.6
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe---eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~---~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
+|+++|||+|||.++|+++|+++|+.| |.|..+ +..+|||||+|.+.++|..|++.|+|..+.. |+.|+|.
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~----G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~--~~~i~v~ 79 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQF----PGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITP--THAMKIT 79 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTS----TTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSST--TCBCEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccC----ccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCC--CcEEEEE
Confidence 568999999999999999999999999 666443 3456999999999999999999999999953 7899999
Q ss_pred Ecc
Q 020917 124 MAK 126 (320)
Q Consensus 124 ~a~ 126 (320)
||+
T Consensus 80 ~ak 82 (83)
T d2b0ga1 80 FAK 82 (83)
T ss_dssp ECC
T ss_pred Eec
Confidence 996
No 68
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.7e-18 Score=125.77 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=67.0
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEccc
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKK 127 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~~ 127 (320)
..++|||+|||+++|++||+++|+.|+. .++.+...+|||||+|.+.++|++|++.|||..+. |+.|+|+|++.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~---~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~---G~~l~V~~a~~ 77 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL---KYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFR---GKDLIVQLQPT 77 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC---CCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEET---TEEEEEEECCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc---eeeeeeccCCceEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEcCC
Confidence 4678999999999999999999999931 33444556799999999999999999999999998 89999999976
Q ss_pred ccc
Q 020917 128 NLF 130 (320)
Q Consensus 128 ~~~ 130 (320)
+..
T Consensus 78 ~~~ 80 (88)
T d1wg1a_ 78 DAL 80 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 69
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.4e-18 Score=128.63 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=70.3
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecC----CcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~----~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||+++++++|+++|++||.|.+++|.++. .+|||||+|.+.++|.+|++ ++|..|.| +.|+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G---~~i~V~~ 95 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDG---RVVEPKR 95 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETT---EEEEEEC
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECC---EEEEEEE
Confidence 4789999999999999999999999999999998653 38999999999999999995 89999999 9999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
++++
T Consensus 96 a~~k 99 (103)
T d1x4ba1 96 AVAR 99 (103)
T ss_dssp CSSC
T ss_pred Cccc
Confidence 8876
No 70
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.9e-19 Score=124.22 Aligned_cols=72 Identities=22% Similarity=0.279 Sum_probs=66.5
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
++|||+|||.++|+++|+++|++||.|.+++|.++.. +|||||+|.+.++|.+|++ +||..|.| +.|+|..|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~G---r~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDS---KTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSS---CCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECC---eEEEEEEC
Confidence 5799999999999999999999999999999986543 8999999999999999996 79999999 89999875
No 71
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.1e-18 Score=127.10 Aligned_cols=72 Identities=10% Similarity=0.219 Sum_probs=66.1
Q ss_pred CCeEEEeCCCCCCCHHHH---HHhhccCCCeeEEEEEecCC-------cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCc
Q 020917 223 CNTLFIGNLGESINEEEL---RGLFSAQPGFKQMKVLRQER-------HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV 292 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L---~~~F~~~G~i~~v~i~~~~~-------~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~ 292 (320)
.++|||+|||++++++|| +++|++||.|.+|++.++.. +|||||+|.+.++|.+|++.|||..|.| +
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~g---r 84 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDG---R 84 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETT---E
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECC---E
Confidence 578999999999999999 67899999999999986542 4899999999999999999999999999 9
Q ss_pred eeEEE
Q 020917 293 GMRIQ 297 (320)
Q Consensus 293 ~l~v~ 297 (320)
.|+|+
T Consensus 85 ~lkvS 89 (89)
T d2cpia1 85 TLKAS 89 (89)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99985
No 72
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.1e-18 Score=125.07 Aligned_cols=76 Identities=20% Similarity=0.231 Sum_probs=65.9
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-----e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCC
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKS 118 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-----~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr 118 (320)
.+.++|||+|||.++|+++|+++|+.| |.|+.+ + ..+|||||+|.+.++|++|++.|||..|. |+
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~----G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~---g~ 79 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQA----GPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLY---GK 79 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTT----SCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCS---SC
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHh----CCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEEC---CE
Confidence 446899999999999999999999999 555333 1 23599999999999999999999999998 89
Q ss_pred eEEEEEccccc
Q 020917 119 VLHTEMAKKNL 129 (320)
Q Consensus 119 ~l~v~~a~~~~ 129 (320)
.|+|.||+.+.
T Consensus 80 ~l~V~~A~~~~ 90 (93)
T d1x5ua1 80 PIRVNKASAHN 90 (93)
T ss_dssp BCEEEETTTTS
T ss_pred EEEEEEcCCCC
Confidence 99999997654
No 73
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.9e-18 Score=120.83 Aligned_cols=73 Identities=15% Similarity=0.361 Sum_probs=67.0
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
.++|||+|||+++|+++|+++|++||.|..+++..+.. +|||||+|.+.++|.+|+. |||..|.| +.|+|..
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~G---r~i~V~~ 77 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNG---HNCEVRK 77 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETT---EECEEEE
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECC---EEEEEEE
Confidence 47899999999999999999999999999999986543 7899999999999999984 89999999 9999987
Q ss_pred e
Q 020917 299 S 299 (320)
Q Consensus 299 a 299 (320)
|
T Consensus 78 A 78 (79)
T d1l3ka2 78 A 78 (79)
T ss_dssp C
T ss_pred C
Confidence 6
No 74
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.74 E-value=3e-18 Score=122.88 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=63.2
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e-C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K-G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~-~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
+++|||+|||.++|+++|+++|+.|+.+....+.. + + .+|||||+|.+.++|++|++.|||..+. |+.|+|.|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~---g~~l~v~~ 78 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVR---NKRLKVSY 78 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEET---TEECEEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEEC---CEEEEEEE
Confidence 46899999999999999999999994333222221 1 1 2599999999999999999999999998 89999999
Q ss_pred ccc
Q 020917 125 AKK 127 (320)
Q Consensus 125 a~~ 127 (320)
|++
T Consensus 79 a~p 81 (82)
T d1b7fa1 79 ARP 81 (82)
T ss_dssp CCC
T ss_pred cCC
Confidence 964
No 75
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.7e-18 Score=125.36 Aligned_cols=81 Identities=20% Similarity=0.225 Sum_probs=67.6
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.+.++|||+|||.++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|++|++.|||..|. |+.|+|
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~---g~~l~V 79 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVD---GRQIRV 79 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTT---SCCCEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEEC---CEEEEE
Confidence 45778999999999999999999999955444332221 24699999999999999999999999998 899999
Q ss_pred EEcccccc
Q 020917 123 EMAKKNLF 130 (320)
Q Consensus 123 ~~a~~~~~ 130 (320)
+||..+..
T Consensus 80 ~~a~~~~~ 87 (90)
T d1x5sa1 80 DQAGKSSD 87 (90)
T ss_dssp EEEECCCC
T ss_pred EEcCCCCC
Confidence 99976543
No 76
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.1e-18 Score=125.61 Aligned_cols=75 Identities=17% Similarity=0.348 Sum_probs=65.8
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-----eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-----~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
.++++|||+|||.++|+++|+++|+.| +.|..+ ...++||||+|.+.++|.+||+.|||..|. |+.|+
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~----G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~---g~~l~ 84 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKY----GAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYD---GYRLR 84 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGG----SCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEET---TEECE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcC----CceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEEC---CEEEE
Confidence 567899999999999999999999999 555333 234699999999999999999999999998 89999
Q ss_pred EEEcccc
Q 020917 122 TEMAKKN 128 (320)
Q Consensus 122 v~~a~~~ 128 (320)
|+||+..
T Consensus 85 V~~a~~~ 91 (95)
T d1x4aa1 85 VEFPRSG 91 (95)
T ss_dssp EECCCCC
T ss_pred EEeccCC
Confidence 9999754
No 77
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.8e-18 Score=124.96 Aligned_cols=79 Identities=20% Similarity=0.283 Sum_probs=66.6
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
...++|||+|||.++|+++|+++|+.|+.+....+.. + ..+|||||+|.+.++|++|++.|||..++ |+.|+|
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~---g~~l~v 79 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELF---GRTIRV 79 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEET---TEEEEE
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEEC---CEEEEE
Confidence 3478999999999999999999999995444433322 1 24699999999999999999999999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
+||+++
T Consensus 80 ~~a~p~ 85 (89)
T d2cqba1 80 NLAKPM 85 (89)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 999754
No 78
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.9e-18 Score=127.78 Aligned_cols=79 Identities=15% Similarity=0.246 Sum_probs=68.7
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCC-eeEEEEEecC-----CcceEEEEEcCHHHHHHHHHHhCCC--eeCCCCCcee
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPG-FKQMKVLRQE-----RHTVCFIEFEDVNSASSVHHNLQGA--VIPSSGSVGM 294 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~-i~~v~i~~~~-----~~g~aFV~F~~~~~A~~Al~~lnG~--~l~g~~~~~l 294 (320)
+++|||+|||.++++++|+++|++||. |.+++++++. .+|||||+|.++++|..|++.|++. .+.| +.|
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g---~~i 77 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWG---HQI 77 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTT---BCC
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECC---EEE
Confidence 468999999999999999999999995 9999997542 3789999999999999999999754 4467 899
Q ss_pred EEEeecCCCC
Q 020917 295 RIQYSKNPFG 304 (320)
Q Consensus 295 ~v~~ak~~~~ 304 (320)
+|+||+++-.
T Consensus 78 ~V~~A~p~~~ 87 (96)
T d2disa1 78 AVDWAEPEID 87 (96)
T ss_dssp EEEESCSSCS
T ss_pred EEEEcCCCCC
Confidence 9999987633
No 79
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.5e-18 Score=127.47 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=66.9
Q ss_pred CCcceEEEcCCC-CCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 47 DEVRTIFITGLP-DDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 47 ~~~~~L~V~nLp-~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
...++|||+||+ ..+++++|+++|++| |.|+.++-.||||||+|.+.++|++|++.|||..|. |+.|+|+|+
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~----G~i~~~~i~rg~aFV~f~~~~~A~~Ai~~lng~~~~---g~~l~V~~a 85 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKY----GKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIA---GQVLDINLA 85 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTS----SCEEEEEEETEEEEEEESSHHHHHHHHHTTTTCEET---TEECEEEET
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhc----CCEEEEEEeCCeEEEEECCHHHHHHHHHHcCCCEEC---CEEEEEEEC
Confidence 456789999997 578899999999999 888776556899999999999999999999999998 899999999
Q ss_pred ccc
Q 020917 126 KKN 128 (320)
Q Consensus 126 ~~~ 128 (320)
+..
T Consensus 86 ~~~ 88 (98)
T d1wf2a_ 86 AEP 88 (98)
T ss_dssp TSC
T ss_pred CCC
Confidence 754
No 80
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=9.2e-18 Score=125.36 Aligned_cols=81 Identities=10% Similarity=0.048 Sum_probs=69.8
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
...+|||+|||+++|++||+++|..|| +..+.++.+.. +|||||+|.+.++|++|++ |||..|.| |.|+|.|
T Consensus 14 ~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~g---R~I~V~~ 88 (102)
T d1weza_ 14 TGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQH---RYVELFL 88 (102)
T ss_dssp SSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSS---SCCEEEE
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECC---EEEEEEE
Confidence 467999999999999999999999997 45666665444 8999999999999999985 99999999 9999999
Q ss_pred ecCCCCCCC
Q 020917 299 SKNPFGKRK 307 (320)
Q Consensus 299 ak~~~~~~~ 307 (320)
++.+-..+.
T Consensus 89 s~~~~~~~~ 97 (102)
T d1weza_ 89 NSTAGTSGS 97 (102)
T ss_dssp ECCCCCCCC
T ss_pred cCCCCCCCC
Confidence 988744433
No 81
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.3e-18 Score=122.67 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=67.6
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
...++|||+|||.++|+++|+++|+.|+.+. ++.+...+|||||+|.+.++|.+|++.|||..|. |+.|+|.||+
T Consensus 6 ~~~k~l~V~nLp~~~te~~l~~~F~~~g~i~--~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~---g~~i~V~~ak 80 (86)
T d2cpda1 6 SSVKILYVRNLMLSTSEEMIEKEFNNIKPGA--VERVKKIRDYAFVHFSNREDAVEAMKALNGKVLD---GSPIEVTLAK 80 (86)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHHHTTSTTC--EEEEEECSSEEEEEESSHHHHHHHHHHHSSEEET---TEEEEEECCC
T ss_pred cCCCEEEEcCCCCCCCHHHHHHhhcccceee--eEEEccccEEEEEEeCCHHHHHHHHHHcCCCEEC---CEEEEEEecc
Confidence 3468999999999999999999999994432 3444556799999999999999999999999998 8999999998
Q ss_pred ccc
Q 020917 127 KNL 129 (320)
Q Consensus 127 ~~~ 129 (320)
+..
T Consensus 81 P~~ 83 (86)
T d2cpda1 81 PVD 83 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 82
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.3e-18 Score=121.39 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=63.3
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCc-eeCcCCCCeEEEEEcccc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM-IFDAETKSVLHTEMAKKN 128 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~-~~~~~~gr~l~v~~a~~~ 128 (320)
.+|||+|||.++|+++|+++|+.|+.+....+.. .||||||+|.+.++|++|++.|||. .+. |+.|+|+|+.++
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~--~rg~aFV~f~~~~~A~~Ai~~lng~~~~~---G~~i~V~~a~~k 76 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL--KSGYAFVDYPDQNWAIRAIETLSGKVELH---GKIMEVDYSVSK 76 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE--ETTEEEECCSCHHHHHHHHHHHTTTCEET---TEECEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec--ccceEEEEECCHHHHHHHHHHhCCCeEEC---CEEEEEEEcCCc
Confidence 3699999999999999999999995443333322 3699999999999999999999995 587 899999999865
Q ss_pred c
Q 020917 129 L 129 (320)
Q Consensus 129 ~ 129 (320)
.
T Consensus 77 ~ 77 (80)
T d2cqha1 77 K 77 (80)
T ss_dssp C
T ss_pred C
Confidence 3
No 83
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.74 E-value=3.8e-18 Score=123.96 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=65.6
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.++++|||+|||.++|+++|+++|+.|+.+....+... + .+|||||+|.+.++|++|++.|||..+. |+.|+|
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~---g~~l~V 81 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIM---GQTIQV 81 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEET---TEECEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEEC---CEEEEE
Confidence 45789999999999999999999999944433222221 1 2599999999999999999999999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
+||.++
T Consensus 82 ~~a~~k 87 (88)
T d1rk8a_ 82 DWCFVK 87 (88)
T ss_dssp EESEEC
T ss_pred EEecCC
Confidence 999764
No 84
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=4.7e-18 Score=121.79 Aligned_cols=75 Identities=15% Similarity=0.276 Sum_probs=62.6
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
++|||+|||.++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|++|++.|||..+. |+.|+|+||
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~---g~~l~v~~A 79 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQ---TKTIKVSYA 79 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEET---TEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEe
Confidence 57999999999999999999999943322222211 22599999999999999999999999998 899999999
Q ss_pred cc
Q 020917 126 KK 127 (320)
Q Consensus 126 ~~ 127 (320)
++
T Consensus 80 kP 81 (82)
T d1fxla1 80 RP 81 (82)
T ss_dssp CC
T ss_pred eC
Confidence 75
No 85
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=2e-18 Score=121.55 Aligned_cols=71 Identities=14% Similarity=0.244 Sum_probs=65.6
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
+|||+|||.++|+++|+++|++||.|..+.+..+.. +|||||+|.+.++|.+|++ |||..|.| +.|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~g---r~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINN---KMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTT---BCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECC---eEEEEEEC
Confidence 499999999999999999999999999998876443 7899999999999999996 99999999 99999876
No 86
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.5e-18 Score=125.54 Aligned_cols=80 Identities=28% Similarity=0.342 Sum_probs=66.8
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
++.++|||+|||.++|+++|+++|+.|+.+....+.. + ..||||||+|.+.++|.+|++.|||..+. |+.|+|
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~---g~~i~v 82 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYD---HLILNV 82 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEET---TEECEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEEC---CEEEEE
Confidence 5678999999999999999999999994433222222 1 13599999999999999999999999998 899999
Q ss_pred EEccccc
Q 020917 123 EMAKKNL 129 (320)
Q Consensus 123 ~~a~~~~ 129 (320)
+||++++
T Consensus 83 ~~akp~~ 89 (90)
T d2cq0a1 83 EWAKPST 89 (90)
T ss_dssp EESSCCC
T ss_pred EeeeCCC
Confidence 9998764
No 87
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=5.3e-18 Score=119.32 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=66.3
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC--cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER--HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~--~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
++|||+|||.++++++|+++|+.||.|.++++.++.+ +++|||+|.+.++|.+|+ .|||..|+| +.|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al-~~~~~~i~g---~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAI-TKTHKVVGQ---NEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHH-TTTTCEETT---EECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHH-HhcCcEECC---EEEEEEEC
Confidence 5899999999999999999999999999999986554 679999999999999998 599999999 99999864
No 88
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6e-18 Score=129.07 Aligned_cols=79 Identities=15% Similarity=0.179 Sum_probs=66.4
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee-CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK-GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~-~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
+.+++|||+|||.++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|..|++.|||..|+ |+.|+|.|+
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~---gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVC---NRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEET---TEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEc
Confidence 45789999999999999999999999933333222222 34799999999999999999999999998 899999999
Q ss_pred ccc
Q 020917 126 KKN 128 (320)
Q Consensus 126 ~~~ 128 (320)
...
T Consensus 82 ~~~ 84 (114)
T d2f9da1 82 NAN 84 (114)
T ss_dssp CHH
T ss_pred CCC
Confidence 754
No 89
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.4e-18 Score=124.74 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=67.1
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
...++|||+|||.++|+++|+++|+.| |.|..+ -..||||||+|.+.++|++|++.|||..+. |+.|+|.|
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~f----G~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~---g~~l~v~~ 88 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPF----GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIE---GHVVKCYW 88 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHH----SCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEET---TEECEEEC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHh----CCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEE
Confidence 346789999999999999999999999 776444 356899999999999999999999999998 89999999
Q ss_pred cccc
Q 020917 125 AKKN 128 (320)
Q Consensus 125 a~~~ 128 (320)
++.+
T Consensus 89 ak~~ 92 (96)
T d1x4ga1 89 GKES 92 (96)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9764
No 90
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=9.7e-18 Score=123.30 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=65.5
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee-----CCcceEEEEeCCHHHHHHHHHHh-cCceeCcCCCCeE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK-----GEKPMGFALFSTAQLAVAAKDAL-QEMIFDAETKSVL 120 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~-----~~kg~aFV~F~~~e~A~~A~~~l-ng~~~~~~~gr~l 120 (320)
.+.++|||+|||.++++++|+++|+.|+.+....+..+ ..||||||+|.+.++|.+|++.| ||..++ |+.|
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~---Gr~l 82 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLY---GRRL 82 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSS---SCBC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEEC---CEEE
Confidence 56788999999999999999999999943322222111 13699999999999999999998 898888 8999
Q ss_pred EEEEccccc
Q 020917 121 HTEMAKKNL 129 (320)
Q Consensus 121 ~v~~a~~~~ 129 (320)
+|+||+.+.
T Consensus 83 ~V~~A~~~~ 91 (94)
T d2cpha1 83 VLEWADSEV 91 (94)
T ss_dssp EEEECCCCC
T ss_pred EEEEcCCCC
Confidence 999997654
No 91
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4.1e-18 Score=119.92 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=64.3
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEe
Q 020917 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ 298 (320)
+|||+|||+++|+++|+++|++||.|.+++|.++.. +|||||+|.+.++|.+|++ +++..|.| +.|+|..
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~G---r~i~V~r 74 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNG---KVIDPKR 74 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTT---BCCEECC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECC---CEEEeeE
Confidence 499999999999999999999999999999987543 7999999999999999997 89999999 8999854
No 92
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.73 E-value=6.7e-18 Score=120.70 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=63.8
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe----eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY----KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~----~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
+||||+|||.++|+++|+++|+.|+.+...++.. ...+|||||+|.+.++|.+|++.|||..+. |+.|+|.|+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~---g~~i~V~~a 78 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIE---GYTLVTKVS 78 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEET---TEECEEEEC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEc
Confidence 6999999999999999999999996554433322 124699999999999999999999999998 899999999
Q ss_pred cc
Q 020917 126 KK 127 (320)
Q Consensus 126 ~~ 127 (320)
++
T Consensus 79 ~P 80 (81)
T d2ghpa1 79 NP 80 (81)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 93
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.6e-18 Score=123.97 Aligned_cols=79 Identities=11% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.+++||||+|||.++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|..|++.|||..++ |+.|+|
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~---gr~i~V 81 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLD---DRIIRT 81 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEET---TEECEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEEC---CEEEEE
Confidence 46789999999999999999999999943332222221 13599999999999999999999999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
+|+...
T Consensus 82 ~~a~~~ 87 (93)
T d1h2vz_ 82 DWDAGF 87 (93)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 998543
No 94
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=7.8e-18 Score=122.44 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=69.4
Q ss_pred CCCeEEEeCCCCC-CCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHh--CCCeeCCCCCceeEEEe
Q 020917 222 PCNTLFIGNLGES-INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL--QGAVIPSSGSVGMRIQY 298 (320)
Q Consensus 222 ~~~~LfV~NL~~~-~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~l--nG~~l~g~~~~~l~v~~ 298 (320)
++++|||+|||.. +|++||+++|++||.|.++++.+ ++++|||+|++.++|..|++.| ++..+.| ++|+|+|
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~--~k~~afV~f~~~~~A~~A~~~l~~~~~~~~g---r~l~V~~ 81 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILN--KINEAFIEMATTEDAQAAVDYYTTTPALVFG---KPVRVHL 81 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECS--SSSCEEEEESSHHHHHHHHHHHHHSCCEETT---EECEEEE
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeec--cceEEEEEEcchhhHHHHHHHHhhCCCccCC---ceEEEEE
Confidence 5789999999986 88999999999999999999974 5689999999999999999966 7888999 9999999
Q ss_pred ecCC
Q 020917 299 SKNP 302 (320)
Q Consensus 299 ak~~ 302 (320)
|++.
T Consensus 82 s~~~ 85 (89)
T d1x4da1 82 SQKY 85 (89)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 9865
No 95
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=3.6e-18 Score=127.80 Aligned_cols=76 Identities=13% Similarity=0.200 Sum_probs=68.9
Q ss_pred CCCeEEEeCCCCCC-CH----HHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEE
Q 020917 222 PCNTLFIGNLGESI-NE----EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296 (320)
Q Consensus 222 ~~~~LfV~NL~~~~-te----e~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v 296 (320)
.+++|||+||+.++ ++ ++|+++|++||.|.++++.+ ++++|||+|.+.++|.+|++.|||+.|.| ++|+|
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k--~~~~afV~f~~~~~A~~Ai~~lng~~~~g---~~l~v 78 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK--SFKRVRINFSNPLSAADARLRLHKTEFLG---KEMKL 78 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET--TTTEEEEECSSTTHHHHHHHTSTTSEETT---EECEE
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec--CCCEEEEEECCHHHHHHHHHHhcccccCC---CEeEE
Confidence 46899999999875 33 57999999999999999984 57899999999999999999999999999 99999
Q ss_pred EeecCC
Q 020917 297 QYSKNP 302 (320)
Q Consensus 297 ~~ak~~ 302 (320)
.|++..
T Consensus 79 ~~a~~~ 84 (104)
T d1weya_ 79 YFAQTL 84 (104)
T ss_dssp ECCCCS
T ss_pred eecccC
Confidence 999876
No 96
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3e-18 Score=124.81 Aligned_cols=78 Identities=22% Similarity=0.326 Sum_probs=64.9
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
..+|||+|||.++|+++|+++|+.|+.+..+.+... +++|||||+|.+.++|++|++.|||..+. |+.|+|.|++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~---g~~i~V~~a~ 84 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLN---DRKVFVGRFK 84 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEET---TEEEEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEEC---CEEEEEEECC
Confidence 568999999999999999999999943322222221 34699999999999999999999999998 8999999997
Q ss_pred ccc
Q 020917 127 KNL 129 (320)
Q Consensus 127 ~~~ 129 (320)
.+.
T Consensus 85 ~~~ 87 (89)
T d1cvja2 85 SRK 87 (89)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 97
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=2.1e-17 Score=122.70 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=65.9
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-----e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCC
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKS 118 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-----~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr 118 (320)
...++|||+|||+++|+++|+++|+.| +.|..+ + ..+|||||+|.+.++|++||+.|||..|. |+
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~----g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~---gr 78 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAY----GPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQ---GR 78 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTT----SCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESS---SC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhc----CCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEEC---CE
Confidence 446789999999999999999999999 555332 1 23599999999999999999999999998 89
Q ss_pred eEEEEEcccccc
Q 020917 119 VLHTEMAKKNLF 130 (320)
Q Consensus 119 ~l~v~~a~~~~~ 130 (320)
.|+|.+++.+..
T Consensus 79 ~i~V~~a~~~~~ 90 (99)
T d1whwa_ 79 MLHVLPSTIKKE 90 (99)
T ss_dssp EEEEEECCCCST
T ss_pred EEEEEECCCCCc
Confidence 999999986543
No 98
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=6.3e-18 Score=122.20 Aligned_cols=75 Identities=27% Similarity=0.382 Sum_probs=66.5
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccE--EEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQ--VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~i--v~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
+.++|||+|||.++++++|+++|+.| |.| +.+...+|||||+|.+.++|++|++.|||..|. |+.|+|+||
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~----G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~---g~~l~V~~A 79 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKY----GKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLR---GKQLRVRFA 79 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTT----CCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBT---TBCCEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHh----CCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEC
Confidence 35689999999999999999999999 555 334456899999999999999999999999998 899999999
Q ss_pred cccc
Q 020917 126 KKNL 129 (320)
Q Consensus 126 ~~~~ 129 (320)
....
T Consensus 80 ~~~~ 83 (86)
T d2cpja1 80 CHSA 83 (86)
T ss_dssp SCCS
T ss_pred CCcC
Confidence 7654
No 99
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.2e-18 Score=126.99 Aligned_cols=82 Identities=15% Similarity=0.041 Sum_probs=69.2
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
.+..+|||+|||+.+|+++|+++|+.|+.+..+.+..+..+|||||+|.+.++|.+|++.|||..+.. .|+.|+|.|++
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~-~~~~l~v~~s~ 83 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSK 83 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSST-TCCCCEEEECS
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEecc-CCcEEEEEecC
Confidence 56889999999999999999999999955444444445567999999999999999999999999842 26899999997
Q ss_pred ccc
Q 020917 127 KNL 129 (320)
Q Consensus 127 ~~~ 129 (320)
.+.
T Consensus 84 ~~~ 86 (108)
T d2adba1 84 LTS 86 (108)
T ss_dssp SCS
T ss_pred Ccc
Confidence 654
No 100
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=6.8e-18 Score=120.37 Aligned_cols=73 Identities=14% Similarity=0.088 Sum_probs=61.7
Q ss_pred eEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e--C-CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K--G-EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 51 ~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~--~-~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
+|||+|||.++|+++|+++|+.|+.+....+.. + + .+|||||+|.+.++|.+|++.|||..+. |+.|+|.||+
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~---gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIK---GKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEET---TEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEEC---CEEEEEEEeC
Confidence 699999999999999999999994433322222 1 1 2599999999999999999999999998 8999999995
No 101
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.1e-17 Score=120.92 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=65.9
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeE-EEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQ-MKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~-v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
..++|||+|||.+++++||+++|+.||.|.. +.+..+.+ +|+|||+|.+.++|.+|++.|||..|.| ++|+|+
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~g---r~i~v~ 84 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGS---RKVKLV 84 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETT---EECEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECC---EEEEEE
Confidence 3567999999999999999999999998865 34443322 7999999999999999999999999999 999999
Q ss_pred ee
Q 020917 298 YS 299 (320)
Q Consensus 298 ~a 299 (320)
++
T Consensus 85 l~ 86 (86)
T d2cqpa1 85 LG 86 (86)
T ss_dssp ES
T ss_pred EC
Confidence 85
No 102
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.4e-18 Score=125.62 Aligned_cols=80 Identities=16% Similarity=0.299 Sum_probs=69.0
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--e--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--K--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
+++++|||+|||.++|+++|+++|+.|+.+...++.. . ..+|||||+|.+.++|.+|++.|||..|. |+.|+|
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~---g~~l~V 92 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLY---GKILVI 92 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCS---SCBCEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEEC---CEEEEE
Confidence 5688999999999999999999999996655544433 2 24699999999999999999999999998 899999
Q ss_pred EEccccc
Q 020917 123 EMAKKNL 129 (320)
Q Consensus 123 ~~a~~~~ 129 (320)
.||+.+.
T Consensus 93 ~~ak~k~ 99 (102)
T d2cpxa1 93 EFGKNKK 99 (102)
T ss_dssp EECCCCS
T ss_pred EeCCCcc
Confidence 9998653
No 103
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=7.1e-18 Score=127.97 Aligned_cols=75 Identities=19% Similarity=0.088 Sum_probs=67.1
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
..++|||+|||.++|+++|+++|+.| |.|..+ ...+|||||+|.+.++|.+|++.|||..|. |+.|+|+|+
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~f----G~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~---gr~l~v~~a 81 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRF----GSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFH---HVPLYLEWA 81 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTT----SCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSS---SSBCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhcc----CCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccC---CCeEEEEEC
Confidence 35799999999999999999999999 777554 456799999999999999999999999998 799999999
Q ss_pred cccc
Q 020917 126 KKNL 129 (320)
Q Consensus 126 ~~~~ 129 (320)
....
T Consensus 82 ~~~~ 85 (111)
T d1whxa_ 82 PIGV 85 (111)
T ss_dssp ETTT
T ss_pred CCCc
Confidence 6554
No 104
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.71 E-value=5.3e-17 Score=128.14 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=66.6
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e-C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K-G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~-~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
.+..++|||+|||.++|+++|+++|+.|+.+....+.. + + .||||||+|.+.++|.+|++.|||..|. |+.|+
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~---gr~l~ 115 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNIL---NKRLK 115 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECS---SCEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEEC---CEEEE
Confidence 35568999999999999999999999994433222222 1 1 3599999999999999999999999998 89999
Q ss_pred EEEccccc
Q 020917 122 TEMAKKNL 129 (320)
Q Consensus 122 v~~a~~~~ 129 (320)
|.|++.+.
T Consensus 116 V~~a~~~~ 123 (139)
T d1u6fa1 116 VALAASGH 123 (139)
T ss_dssp EEESSCCC
T ss_pred EEEcCCCC
Confidence 99997543
No 105
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.8e-17 Score=117.85 Aligned_cols=73 Identities=14% Similarity=0.218 Sum_probs=63.5
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEE--eeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN--YKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~--~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
..+++|||+||+ +|+++|+++|+.| |.|+. +...+|||||+|.+.++|.+|++.|||..+. |+.|+|.|
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~----G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~---g~~l~V~~ 73 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPF----GNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVE---SVQLKVNI 73 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTT----CCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCS---SCBCEEEE
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhcc----CccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEEC---CEEEEEEE
Confidence 457899999996 8999999999999 55533 3456799999999999999999999999998 89999999
Q ss_pred cccc
Q 020917 125 AKKN 128 (320)
Q Consensus 125 a~~~ 128 (320)
++.+
T Consensus 74 a~~~ 77 (79)
T d2bz2a1 74 ARKQ 77 (79)
T ss_dssp CCSS
T ss_pred ecCC
Confidence 9643
No 106
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.5e-17 Score=119.35 Aligned_cols=74 Identities=19% Similarity=0.201 Sum_probs=63.2
Q ss_pred EEEcCCCCCCCHHHHHHHhhhCCCccccE-EEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 52 IFITGLPDDVKERELQNLLRWLPGYEASQ-VNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 52 L~V~nLp~~~tee~L~~lF~~~~~~~~~i-v~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
|||+|||.++|+++|+++|+.|+.+...+ +.. + ..+|||||+|.+.++|++|++.|+|..+. |++|+|.||.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~---gr~l~v~~a~ 77 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLC---NRPITVSYAF 77 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEET---TEECEEEESC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEEC---CEEEEEEEec
Confidence 89999999999999999999996554433 222 1 23699999999999999999999999998 8999999997
Q ss_pred cc
Q 020917 127 KN 128 (320)
Q Consensus 127 ~~ 128 (320)
++
T Consensus 78 ~k 79 (83)
T d1x5ta1 78 KK 79 (83)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 107
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=3.3e-18 Score=119.51 Aligned_cols=67 Identities=15% Similarity=0.260 Sum_probs=62.2
Q ss_pred EEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeE
Q 020917 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMR 295 (320)
Q Consensus 226 LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~ 295 (320)
|||+|||.++|+++|+++|++||.|..+++.++.. +|+|||+|.+.++|.+|++.|||..|.| +.||
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~G---r~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQA---QMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCE---ESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECC---EECc
Confidence 79999999999999999999999999999986543 8999999999999999999999999999 7664
No 108
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=2.3e-17 Score=115.94 Aligned_cols=70 Identities=23% Similarity=0.325 Sum_probs=62.5
Q ss_pred EEEcCCCCCCCHHHHHHHhhhCCCccccE-EEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcccc
Q 020917 52 IFITGLPDDVKERELQNLLRWLPGYEASQ-VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128 (320)
Q Consensus 52 L~V~nLp~~~tee~L~~lF~~~~~~~~~i-v~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~~~ 128 (320)
|||+|||+++|+++|+++|++| |.+ +.....+|||||+|.+.++|.+|++.|||..+. |+.|+|.|++.+
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~----g~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~---g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDY----ELKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLR---ERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTS----CEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESS---SCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhcc----cccceeecccceeEEEEECCHHHHHHHHHHhCCccCC---CCEEEEEEeCCC
Confidence 7999999999999999999999 522 334556899999999999999999999999998 899999999654
No 109
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=3.7e-17 Score=123.56 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=64.8
Q ss_pred cceEEEcCCC-CCCCHHHHHHHhhhCCCccccEEEe---eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 49 VRTIFITGLP-DDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 49 ~~~L~V~nLp-~~~tee~L~~lF~~~~~~~~~iv~~---~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
+++|||+||+ ..+|+++|+++|+.| |.|..+ +..+|||||+|.+.++|.+|++.|||..|. |+.|+|+|
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~f----G~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~---g~~l~v~~ 74 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVY----GDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLH---GKPIRITL 74 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHH----TCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCS---SSBCEEEC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhc----cccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEE
Confidence 6799999995 569999999999999 766444 245699999999999999999999999998 89999999
Q ss_pred ccccc
Q 020917 125 AKKNL 129 (320)
Q Consensus 125 a~~~~ 129 (320)
++...
T Consensus 75 s~~~~ 79 (109)
T d2adca1 75 SKHQN 79 (109)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 97553
No 110
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.71 E-value=8.9e-18 Score=124.03 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=67.5
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--e-CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--K-GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~-~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
.+.++|||+|||.++|+++|+++|+.| |.+..+ . ..+|||||+|.+.++|.+|++.|||..|. |+.|+|.
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~----g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~---gr~i~V~ 86 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDA----LEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEID---GRSVSLY 86 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSE----EEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEET---TEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhc----ccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEEC---CEEEEEE
Confidence 457899999999999999999999999 666433 2 23699999999999999999999999998 8999999
Q ss_pred Ecccccc
Q 020917 124 MAKKNLF 130 (320)
Q Consensus 124 ~a~~~~~ 130 (320)
|+.++..
T Consensus 87 ~a~~k~~ 93 (96)
T d1fjca_ 87 YTGEKGG 93 (96)
T ss_dssp ECSSSCC
T ss_pred EeCCCCC
Confidence 9987643
No 111
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.7e-17 Score=119.12 Aligned_cols=73 Identities=19% Similarity=0.257 Sum_probs=61.2
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e-C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K-G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~-~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
++.++|||+|||.++|+++|+++|+.|+.+....+.. + + .+|||||+|.+.++|++|++.|||..|. |+.|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~---gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELD---GRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEET---TEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEEC---CEEeEC
Confidence 5678999999999999999999999995443332322 1 1 2599999999999999999999999998 899987
No 112
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.5e-17 Score=116.75 Aligned_cols=73 Identities=14% Similarity=0.221 Sum_probs=61.3
Q ss_pred eEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 51 ~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
+|||+|||+++++++|+++|+.|+.+....+.. + ..+|||||+|.+.++|.+|++.|||..+. |+.|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~---g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD---GRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEET---TEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEee
Confidence 699999999999999999999993332222222 1 23599999999999999999999999998 8999999985
No 113
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=3.6e-17 Score=121.15 Aligned_cols=76 Identities=25% Similarity=0.269 Sum_probs=63.9
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-----e---CCcceEEEEeCCHHHHHHHHHHhc------Ccee
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----K---GEKPMGFALFSTAQLAVAAKDALQ------EMIF 112 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-----~---~~kg~aFV~F~~~e~A~~A~~~ln------g~~~ 112 (320)
.++++|||+|||+++|+++|+++|+.| |.+..+ + ..+|||||+|.+.++|.+|++.|| |..+
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~----G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~ 81 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQF----GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKL 81 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTT----SCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEES
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhcc----ccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEE
Confidence 467899999999999999999999999 555332 1 235999999999999999999887 5666
Q ss_pred CcCCCCeEEEEEccccc
Q 020917 113 DAETKSVLHTEMAKKNL 129 (320)
Q Consensus 113 ~~~~gr~l~v~~a~~~~ 129 (320)
. ||.|+|.||+++.
T Consensus 82 ~---gr~l~v~~a~~k~ 95 (98)
T d1x4ha1 82 D---GRQLKVDLAVTRD 95 (98)
T ss_dssp S---SCEEEEECCCCCC
T ss_pred C---CEEEEEEECCCCC
Confidence 6 8999999997653
No 114
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.7e-18 Score=119.04 Aligned_cols=71 Identities=17% Similarity=0.367 Sum_probs=64.5
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
.|||+|||+++|+++|+++|++||.|.+++|..+.. +|||||+|.+.++|.+||+ +++..|.| +.|+|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g---~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGL---SKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTT---BCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECC---EEeEEEEC
Confidence 599999999999999999999999999999986543 8999999999999999996 58889999 89998764
No 115
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.70 E-value=1.2e-17 Score=122.03 Aligned_cols=78 Identities=18% Similarity=0.135 Sum_probs=65.3
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe---eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~---~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
...++|||+|||+++|+++|+++|+.|+.+....+.. ...+|||||+|.+.++|.+||+ |||..+. |+.|+|.
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~---g~~i~V~ 86 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVF---GNEIKLE 86 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEET---TEEEEEE
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEEC---CEEEEEE
Confidence 4567999999999999999999999995444332222 2357999999999999999997 9999998 8999999
Q ss_pred Ecccc
Q 020917 124 MAKKN 128 (320)
Q Consensus 124 ~a~~~ 128 (320)
+|+.+
T Consensus 87 ~ak~k 91 (91)
T d1fjeb1 87 KPKGR 91 (91)
T ss_dssp CCCCS
T ss_pred ecCCC
Confidence 99753
No 116
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2.1e-17 Score=120.72 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=65.9
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeC-----CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKG-----EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~-----~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
|++||||+|||.++|++||++.|..++...|.|..++- .+|||||+|.+.++|.+|++.|||..+. |+.|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~---g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFY---DKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEET---TEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEEC---CEEEEE
Confidence 57899999999999999998654333333377755531 3699999999999999999999999998 899999
Q ss_pred EEcccccc
Q 020917 123 EMAKKNLF 130 (320)
Q Consensus 123 ~~a~~~~~ 130 (320)
.||+.++.
T Consensus 79 ~~ak~~~~ 86 (91)
T d1nu4a_ 79 QYAKTDSD 86 (91)
T ss_dssp EECSSCCT
T ss_pred EEeCCCch
Confidence 99987654
No 117
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=5.1e-17 Score=117.92 Aligned_cols=76 Identities=17% Similarity=0.169 Sum_probs=66.2
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHh--cCceeCcCCCCeEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDAL--QEMIFDAETKSVLH 121 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~l--ng~~~~~~~gr~l~ 121 (320)
..|+++|||+|||.++|+++|+++|+.| |.|..+ ...++||||+|.+.++|++|++.+ ++..+. |++|+
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~----G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~---g~~l~ 77 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPF----GKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLR---NQPIY 77 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTT----SCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEET---TEECE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcc----cccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccC---CCEEE
Confidence 4689999999999999999999999999 666444 456799999999999999999865 567777 89999
Q ss_pred EEEcccc
Q 020917 122 TEMAKKN 128 (320)
Q Consensus 122 v~~a~~~ 128 (320)
|.|++.+
T Consensus 78 v~~sk~~ 84 (88)
T d2cq1a1 78 IQYSNHK 84 (88)
T ss_dssp EEECSCS
T ss_pred EEECCCC
Confidence 9999754
No 118
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.2e-16 Score=119.58 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=67.3
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC----cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~----~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
...+|||+|||+++|++||+++|..+|.|..+.++.... +|+|||+|.+.++|.+|++ |||..|.| |.|+|.
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~g---R~i~V~ 89 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGH---RYIEIF 89 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSS---SCCEEE
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcc---eEEEEE
Confidence 356899999999999999999999999887754443222 7999999999999999995 99999999 999999
Q ss_pred eecCC
Q 020917 298 YSKNP 302 (320)
Q Consensus 298 ~ak~~ 302 (320)
+++.+
T Consensus 90 ~~~~~ 94 (104)
T d1wg5a_ 90 KSSRA 94 (104)
T ss_dssp EECTT
T ss_pred ECCHH
Confidence 99876
No 119
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=2e-17 Score=119.26 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=63.9
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
.+|||+|||.++|+++|+++|+.|+.+....+.. + .++|||||+|.+.++|.+|++.|||..+. |+.|+|+||
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~---g~~l~V~~A 78 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLG---DKKLLVQRA 78 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCS---SSCCEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEEC
Confidence 5799999999999999999999994433322222 1 23699999999999999999999999998 799999999
Q ss_pred ccc
Q 020917 126 KKN 128 (320)
Q Consensus 126 ~~~ 128 (320)
+..
T Consensus 79 ~~~ 81 (85)
T d2u2fa_ 79 SVG 81 (85)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 120
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2.2e-17 Score=119.10 Aligned_cols=73 Identities=19% Similarity=0.302 Sum_probs=61.7
Q ss_pred EEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-eC------CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNY-KG------EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 52 L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~~------~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
|||+|||.++|+++|+++|+.|+.+....+.. +. +||||||+|.+.++|.+|++.|||..+. |+.|+|.|
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~---g~~i~V~~ 77 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVD---GHKLEVRI 77 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEET---TEECEEEC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEEC---CEEEEEEE
Confidence 89999999999999999999995444333322 21 2599999999999999999999999998 89999999
Q ss_pred ccc
Q 020917 125 AKK 127 (320)
Q Consensus 125 a~~ 127 (320)
++.
T Consensus 78 a~~ 80 (85)
T d2cpfa1 78 SER 80 (85)
T ss_dssp SSC
T ss_pred CCC
Confidence 854
No 121
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=6.1e-17 Score=119.69 Aligned_cols=77 Identities=13% Similarity=0.205 Sum_probs=66.7
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
.+.++|||+|||+++|+++|+++|+.| |.|..+ ...++||||+|.+.++|.+|++.|||..|.. .++.|+|+|
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~----G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g-~~~~l~v~~ 89 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRF----GSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGG-PDRRLRVDF 89 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTT----SCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSS-SSCBCEEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhh----cccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCC-CceEEEEEe
Confidence 467999999999999999999999999 666554 3457999999999999999999999999952 247899999
Q ss_pred cccc
Q 020917 125 AKKN 128 (320)
Q Consensus 125 a~~~ 128 (320)
++..
T Consensus 90 ak~~ 93 (97)
T d1whya_ 90 AKSG 93 (97)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9754
No 122
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.2e-17 Score=118.19 Aligned_cols=77 Identities=18% Similarity=0.286 Sum_probs=61.6
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
.+++|||+|||.++|+++|+++|+.|+.+....+.. + ..+|||||+|.+.++|++|++.|||..+.. ..++|+|.
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G-~~~~i~V~ 83 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSG-ATEPITVK 83 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTT-CSSCCEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCC-CCEEEEEE
Confidence 467899999999999999999999994433322222 1 135999999999999999999999999961 12679999
Q ss_pred Ec
Q 020917 124 MA 125 (320)
Q Consensus 124 ~a 125 (320)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 123
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.69 E-value=4e-17 Score=117.65 Aligned_cols=77 Identities=17% Similarity=0.294 Sum_probs=62.1
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
.+++|||+|||.++|+++|+++|+.|+.+....+.. + ..+|||||+|.+.++|.+|++.|||..+.. .+++|+|.
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g-~~~~l~V~ 83 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEG-GSQPLSVR 83 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTT-CSSCCEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCC-CCeEEEEE
Confidence 467899999999999999999999994433322222 1 235999999999999999999999999861 13899999
Q ss_pred Ec
Q 020917 124 MA 125 (320)
Q Consensus 124 ~a 125 (320)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 124
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.6e-17 Score=122.86 Aligned_cols=78 Identities=23% Similarity=0.259 Sum_probs=66.5
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
+.++|||+|||+++|+++|+++|+.|+.+....|... ..+|||||+|.+.++|.+|++ ++|..|. |+.|.|.
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~---G~~i~V~ 94 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSID---GRVVEPK 94 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEET---TEEEEEE
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeEC---CEEEEEE
Confidence 4589999999999999999999999966655555432 246999999999999999997 8999997 8999999
Q ss_pred Eccccc
Q 020917 124 MAKKNL 129 (320)
Q Consensus 124 ~a~~~~ 129 (320)
+|.++.
T Consensus 95 ~a~~ke 100 (103)
T d1x4ba1 95 RAVARE 100 (103)
T ss_dssp CCSSCC
T ss_pred ECcccC
Confidence 987653
No 125
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.6e-17 Score=122.57 Aligned_cols=80 Identities=21% Similarity=0.240 Sum_probs=63.5
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.+.++|||+|||+++|+++|+++|+.|+..+..++..+ + .+|||||+|.+.++|++|++ |||..|. |+.|+|
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~---gr~l~V 88 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLG---NKRIRV 88 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSCEEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEET---TEECEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhccccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEEC---CEEEEE
Confidence 45689999999999999999999999932211222221 1 35999999999999988875 9999998 899999
Q ss_pred EEcccccc
Q 020917 123 EMAKKNLF 130 (320)
Q Consensus 123 ~~a~~~~~ 130 (320)
+||+.+..
T Consensus 89 ~~a~~~~~ 96 (104)
T d1wi8a_ 89 DVADQAQD 96 (104)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 99976543
No 126
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=6.8e-17 Score=119.56 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=66.0
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee-CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK-GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~-~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
...++|||+|||++++++||+++|+.| |.|..++ ..+|||||+|.+.++|++||+.|||..|. |+.|+|.|+
T Consensus 13 ~~~~~i~V~Nlp~~~~~~~L~~~F~~~----G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~lng~~~~---g~~i~v~~~ 85 (98)
T d1wg4a_ 13 RSDFRVLVSGLPPSGSWQDLKDHMREA----GDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFR---SHEGETSYI 85 (98)
T ss_dssp SCSCEEEEECCCSSCCHHHHHHHHTTS----SCEEEEEEETTTEEEEEESSHHHHHHHHHHHSSEEEE---CTTSCEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhh----cccccccccccceEEEEECCHHHHHHHHHHhCCCEeC---CeEEEEEEE
Confidence 346789999999999999999999999 6664442 24599999999999999999999999998 899999998
Q ss_pred cccc
Q 020917 126 KKNL 129 (320)
Q Consensus 126 ~~~~ 129 (320)
+.+.
T Consensus 86 ~~~~ 89 (98)
T d1wg4a_ 86 RVYP 89 (98)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 6543
No 127
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=2e-17 Score=123.08 Aligned_cols=77 Identities=14% Similarity=0.221 Sum_probs=63.5
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
+.++|||+|||.++|+++|+++|+.|+.+....+.. + .+||||||+|.+.++|.+|++ |||..|. |+.|+|.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~---G~~l~V~ 92 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLL---GVPIIVQ 92 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEET---TEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEEC---CEEEEEE
Confidence 468999999999999999999999994333222222 1 246999999999999999996 9999998 8999999
Q ss_pred Ecccc
Q 020917 124 MAKKN 128 (320)
Q Consensus 124 ~a~~~ 128 (320)
+++.+
T Consensus 93 ~a~~~ 97 (101)
T d2cq4a1 93 ASQAE 97 (101)
T ss_dssp EHHHH
T ss_pred ECCCC
Confidence 98654
No 128
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.68 E-value=3.7e-17 Score=118.12 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=61.9
Q ss_pred CcceEEEcCCCCCCC-HHHHHHHhhhCCCccccEEEe-e----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 48 EVRTIFITGLPDDVK-ERELQNLLRWLPGYEASQVNY-K----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 48 ~~~~L~V~nLp~~~t-ee~L~~lF~~~~~~~~~iv~~-~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
+.++|||+|||.++| |++|+++|+.|+.++...+.. . ..+|||||+|.+.++|.+|++ |||..+. |+.|+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~---gr~l~ 78 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLG---NREIS 78 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEET---TEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEEC---CEEEE
Confidence 589999999999986 556999999994333322211 1 235999999999999999996 9999998 89999
Q ss_pred EEEcccc
Q 020917 122 TEMAKKN 128 (320)
Q Consensus 122 v~~a~~~ 128 (320)
|.||+.+
T Consensus 79 V~~a~~k 85 (86)
T d2ghpa3 79 VSLADKK 85 (86)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9999753
No 129
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.8e-17 Score=121.14 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=65.5
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccE------EEe-e-----CCcceEEEEeCCHHHHHHHHHHhcCceeCc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQ------VNY-K-----GEKPMGFALFSTAQLAVAAKDALQEMIFDA 114 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~i------v~~-~-----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~ 114 (320)
.+.++|||+|||.++|+++|+++|+.|+.+.... +.+ + ..+|||||+|.+.++|.+|++.|||..|.
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~- 84 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ- 84 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET-
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC-
Confidence 4578999999999999999999999995442211 111 1 12599999999999999999999999998
Q ss_pred CCCCeEEEEEcccc
Q 020917 115 ETKSVLHTEMAKKN 128 (320)
Q Consensus 115 ~~gr~l~v~~a~~~ 128 (320)
||.|+|.||+.+
T Consensus 85 --gr~i~V~~a~~~ 96 (101)
T d2cpea1 85 --GSKLKVSLARKK 96 (101)
T ss_dssp --TEECEEECSSCC
T ss_pred --CEEEEEEEcCCC
Confidence 899999999754
No 130
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=4.2e-17 Score=121.48 Aligned_cols=78 Identities=15% Similarity=0.259 Sum_probs=63.7
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
.+.++|||+|||.++|+++|+++|+.|+.+....+... .++|||||+|.+.++|.+|++.|||..|. ||++.|.
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~---gr~~~v~ 92 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIK---TPPGVSA 92 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCC---CCTTSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEEC---CcCCccC
Confidence 45679999999999999999999999944433322221 23599999999999999999999999998 7988887
Q ss_pred Eccc
Q 020917 124 MAKK 127 (320)
Q Consensus 124 ~a~~ 127 (320)
++++
T Consensus 93 ~~~P 96 (101)
T d1x5oa1 93 PTEP 96 (101)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 7653
No 131
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=9e-17 Score=115.45 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=62.4
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
+..++|||+|||+++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|++|++ ++|..|. |+.|+|
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~---Gr~i~V 79 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVD---GRVVEP 79 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEET---TEECEE
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEEC---CEEEEE
Confidence 34689999999999999999999999944433323221 135999999999999999998 6899997 899999
Q ss_pred EEcc
Q 020917 123 EMAK 126 (320)
Q Consensus 123 ~~a~ 126 (320)
..|.
T Consensus 80 ~~A~ 83 (84)
T d1l3ka1 80 KRAV 83 (84)
T ss_dssp EECC
T ss_pred Eeee
Confidence 8874
No 132
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-16 Score=119.64 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=66.3
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
+.++|||+|||.++|+++|+++|+.|+.+....+... + .+|||||+|.+.++|.+|++.|||..|. |+.|+|+
T Consensus 7 ~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~---g~~i~V~ 83 (104)
T d1p1ta_ 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFS---GRALRVD 83 (104)
T ss_dssp HHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCS---SSCBEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEEC---CEEEEEE
Confidence 3579999999999999999999999955444333322 1 2599999999999999999999999998 8999999
Q ss_pred Eccccc
Q 020917 124 MAKKNL 129 (320)
Q Consensus 124 ~a~~~~ 129 (320)
|+..+.
T Consensus 84 ~a~~~~ 89 (104)
T d1p1ta_ 84 NAASEK 89 (104)
T ss_dssp ETTCTT
T ss_pred ECCCCC
Confidence 997654
No 133
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=2.1e-16 Score=118.05 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=62.7
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
..++|||+|||+.+|+++|+++|+.|+.+....+.. + .++|||||+|.+.++|++|++.+|+ .|. |+.|+|.
T Consensus 9 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~---Gr~l~V~ 84 (103)
T d2cqda1 9 TFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IID---GRKANVN 84 (103)
T ss_dssp SSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EET---TEECEEE
T ss_pred CCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCC---CEEEEEE
Confidence 357899999999999999999999994333222222 1 2469999999999999999998876 676 8999999
Q ss_pred Eccccc
Q 020917 124 MAKKNL 129 (320)
Q Consensus 124 ~a~~~~ 129 (320)
++..+.
T Consensus 85 ~a~~~~ 90 (103)
T d2cqda1 85 LAYLGA 90 (103)
T ss_dssp ESTTTC
T ss_pred EcCCCC
Confidence 997543
No 134
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3.4e-17 Score=118.82 Aligned_cols=75 Identities=17% Similarity=0.282 Sum_probs=64.0
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe---eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~---~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
...++|||+|||.++||++|+++|+.| |.|+.+ +..+|||||+|.+.++|++|+. ++..|. |+.|+|.
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~----G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~---g~~l~v~ 73 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQY----GDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIK---GISVHIS 73 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTT----SCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEET---TEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHc----CCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEEC---CEEeEEE
Confidence 457899999999999999999999999 655444 2356999999999999999985 788887 8999999
Q ss_pred Ecccccc
Q 020917 124 MAKKNLF 130 (320)
Q Consensus 124 ~a~~~~~ 130 (320)
+++++..
T Consensus 74 ~a~~k~~ 80 (88)
T d1wf0a_ 74 NAEPKHN 80 (88)
T ss_dssp CCCCCCC
T ss_pred eCCCCCC
Confidence 9976543
No 135
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=7.1e-17 Score=113.46 Aligned_cols=71 Identities=13% Similarity=0.320 Sum_probs=60.0
Q ss_pred eEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 51 ~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
+|||+|||+++||++|+++|+.|+.+....+.. + ..+|||||+|.+.++|++|++ +||..|. ||.|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~---gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEIN---NKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBT---TBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEEC---CeEEEEEEC
Confidence 599999999999999999999995544433322 1 235999999999999999997 9999998 899999876
No 136
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.1e-16 Score=116.38 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=62.3
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
...++|||+|||+++|+++|+++|+.|+.+....+... .+||||||+|.+.++|++||+.+ ..|+ |+.|.|
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~---Gr~i~v 80 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMID---GRWCDC 80 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEET---TEEEEE
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccC---CEEeEE
Confidence 46789999999999999999999999954444333331 23599999999999999999843 4666 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
.++.++
T Consensus 81 ~~a~~k 86 (90)
T d2cqga1 81 KLPNSK 86 (90)
T ss_dssp ECCCTT
T ss_pred EeCCCC
Confidence 999765
No 137
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.66 E-value=4.8e-16 Score=116.28 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=66.0
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhc--CceeCcCCCCeEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQ--EMIFDAETKSVLH 121 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~ln--g~~~~~~~gr~l~ 121 (320)
..++++|||+|||..+||+||+++|+.| |.|..+ ...||||||+|.+.++|.+|++.|+ +..+. |++|+
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~f----G~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~---g~~l~ 84 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKF----GTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIA---GQQAF 84 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTT----SCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSS---SSBCE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhc----ccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEe---eEEEE
Confidence 3578999999999999999999999999 777554 3567999999999999999999885 55556 89999
Q ss_pred EEEccccc
Q 020917 122 TEMAKKNL 129 (320)
Q Consensus 122 v~~a~~~~ 129 (320)
|.|++.+.
T Consensus 85 v~~s~~~~ 92 (104)
T d1wexa_ 85 FNYSTSKR 92 (104)
T ss_dssp EEECSSSS
T ss_pred EEEcCCCc
Confidence 99997653
No 138
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=3.1e-17 Score=118.78 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=64.2
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeC-CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcccc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKG-EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~-~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~~~ 128 (320)
.+|||+|||+++|+++|+++|+.| |.|+.++- .+|||||+|.+.++|++||+.|||..|. |+.|+|.+++.+
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~----G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~---g~~i~v~~~~~~ 73 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREA----GDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR---SHEGETAYIRVK 73 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGG----SCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCC---CTTSCCCBCEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhh----cccccccccccceeeEEeCCHHHHHHHHHHhCCCEEC---CcEeEEeEEecC
Confidence 369999999999999999999999 77766542 3599999999999999999999999998 799999888654
Q ss_pred c
Q 020917 129 L 129 (320)
Q Consensus 129 ~ 129 (320)
.
T Consensus 74 ~ 74 (87)
T d3begb1 74 V 74 (87)
T ss_dssp E
T ss_pred c
Confidence 3
No 139
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2e-16 Score=112.33 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=61.4
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--C--CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--G--EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~--~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
.++|||+|||.++|+++|+++|+.|+.+....+... + .+|||||+|.+.++|.+|++ ++|..|. ||.|+|..
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~---Gr~i~V~~ 77 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVN---GHNCEVRK 77 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEET---TEECEEEE
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEEC---CEEEEEEE
Confidence 589999999999999999999999954444333332 1 25999999999999999997 8999998 89999987
Q ss_pred c
Q 020917 125 A 125 (320)
Q Consensus 125 a 125 (320)
|
T Consensus 78 A 78 (79)
T d1l3ka2 78 A 78 (79)
T ss_dssp C
T ss_pred C
Confidence 6
No 140
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=8.1e-17 Score=113.67 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=61.1
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
++|||+|||+++|+++|+++|+.|+.+....+.. + .+||||||+|.+.++|++|++ +|+..++ ||.|+|.+|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~---Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELD---SKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCS---SCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEEC---CeEEEEEEC
Confidence 5899999999999999999999996554433332 2 246999999999999999998 7999998 899999876
No 141
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.6e-16 Score=114.44 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=62.9
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~ 124 (320)
..++|||+|||.++|+++|+++|+.|+.+....+... ..+|||||+|.+.++|.+|++ ++|..+. |+.|+|.|
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~---g~~l~v~~ 80 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYK---ETDLLILF 80 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEET---TEECEEEE
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEEC---CEEEEEEE
Confidence 3689999999999999999999999954444333332 235999999999999999997 7999998 89999998
Q ss_pred cc
Q 020917 125 AK 126 (320)
Q Consensus 125 a~ 126 (320)
.+
T Consensus 81 ~~ 82 (85)
T d1zh5a2 81 KD 82 (85)
T ss_dssp GG
T ss_pred cC
Confidence 74
No 142
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=2.7e-16 Score=116.47 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=65.5
Q ss_pred CCCCcceEEEcCCCCC-CCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHH--HhcCceeCcCCCCe
Q 020917 45 AHDEVRTIFITGLPDD-VKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKD--ALQEMIFDAETKSV 119 (320)
Q Consensus 45 ~~~~~~~L~V~nLp~~-~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~--~lng~~~~~~~gr~ 119 (320)
...++++|||+|||.+ +|+++|+++|+.| |.|..+ -..+|||||+|.+.++|.+|++ .+++..+. |+.
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~f----G~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~---gr~ 86 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPY----GKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQ---GRC 86 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTT----SCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSS---SSC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccc----cceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceEC---CEE
Confidence 3456889999999985 8999999999999 665333 3457999999999999999998 47788888 899
Q ss_pred EEEEEccccc
Q 020917 120 LHTEMAKKNL 129 (320)
Q Consensus 120 l~v~~a~~~~ 129 (320)
|+|.||+.+.
T Consensus 87 l~V~~s~~~~ 96 (99)
T d1x4fa1 87 VKVDLSEKYK 96 (99)
T ss_dssp CEEEEECSCS
T ss_pred EEEEEcCCcc
Confidence 9999997553
No 143
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.6e-16 Score=117.20 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=62.3
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCC-ccccEEEe--e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPG-YEASQVNY--K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~-~~~~iv~~--~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
+++|||+|||.++|+++|+++|+.|+. +...++.. . .++|||||+|.+.++|.+|++.|++..+.. +|+.|+|
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~-~g~~i~V 79 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQL-WGHQIAV 79 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCB-TTBCCEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEE-CCEEEEE
Confidence 478999999999999999999999953 22222211 1 246999999999999999999997554411 1799999
Q ss_pred EEcccccc
Q 020917 123 EMAKKNLF 130 (320)
Q Consensus 123 ~~a~~~~~ 130 (320)
+||+++..
T Consensus 80 ~~A~p~~~ 87 (96)
T d2disa1 80 DWAEPEID 87 (96)
T ss_dssp EESCSSCS
T ss_pred EEcCCCCC
Confidence 99976543
No 144
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=4.7e-16 Score=112.17 Aligned_cols=75 Identities=13% Similarity=0.049 Sum_probs=64.0
Q ss_pred CcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
...+|||+|||++++++||+++|+.|+.+...++.. + ..+|||||+|.+.++|++|++.|||..+. ||.|+|.
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~---gr~i~v~ 84 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIG---SRKVKLV 84 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEET---TEECEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEEC---CEEEEEE
Confidence 356799999999999999999999996665544333 2 22599999999999999999999999998 8999998
Q ss_pred Ec
Q 020917 124 MA 125 (320)
Q Consensus 124 ~a 125 (320)
++
T Consensus 85 l~ 86 (86)
T d2cqpa1 85 LG 86 (86)
T ss_dssp ES
T ss_pred EC
Confidence 75
No 145
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.5e-16 Score=117.38 Aligned_cols=80 Identities=16% Similarity=0.094 Sum_probs=65.1
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee-C-CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK-G-EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTE 123 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~-~-~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~ 123 (320)
.....+|||+|||+++||+||+++|+.+..+...++... + .+|||||+|.+.++|.+|++ ||+..|. ||.|+|.
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~---gR~I~V~ 87 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQ---HRYVELF 87 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCCCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSS---SSCCEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccCcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEEC---CEEEEEE
Confidence 355789999999999999999999999843332222222 2 25999999999999999997 8999998 8999999
Q ss_pred Eccccc
Q 020917 124 MAKKNL 129 (320)
Q Consensus 124 ~a~~~~ 129 (320)
++....
T Consensus 88 ~s~~~~ 93 (102)
T d1weza_ 88 LNSTAG 93 (102)
T ss_dssp EECCCC
T ss_pred EcCCCC
Confidence 987653
No 146
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=2.6e-16 Score=117.55 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=65.4
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeE-EEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQ-MKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~-v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
...+|||+|||+++|++||+++|..||.|.. +.+..+.. +|+|||+|.+.++|.+||+ |||..|.| +.|+|.
T Consensus 7 ~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~g---r~i~V~ 82 (103)
T d2cpya1 7 AKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNG---REAFVH 82 (103)
T ss_dssp CCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETT---EEEEEE
T ss_pred CceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECC---cEEEEE
Confidence 3578999999999999999999999998876 44443322 8999999999999999995 99999999 999999
Q ss_pred eec
Q 020917 298 YSK 300 (320)
Q Consensus 298 ~ak 300 (320)
++.
T Consensus 83 ~~~ 85 (103)
T d2cpya1 83 VVT 85 (103)
T ss_dssp EEC
T ss_pred ECC
Confidence 864
No 147
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.63 E-value=4.6e-16 Score=112.87 Aligned_cols=77 Identities=16% Similarity=0.107 Sum_probs=66.2
Q ss_pred CCCCcceEEEcCCCCC-CCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHh--cCceeCcCCCCe
Q 020917 45 AHDEVRTIFITGLPDD-VKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDAL--QEMIFDAETKSV 119 (320)
Q Consensus 45 ~~~~~~~L~V~nLp~~-~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~l--ng~~~~~~~gr~ 119 (320)
..++.++|||+|||.. +|++||+++|+.| |.|..+ ...+++|||+|.+.++|..|++.| ++..+. |++
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~f----G~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~---gr~ 76 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPF----GVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVF---GKP 76 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGG----SCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEET---TEE
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhh----CCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccC---Cce
Confidence 3467899999999986 8899999999999 777555 345799999999999999999976 577787 899
Q ss_pred EEEEEcccc
Q 020917 120 LHTEMAKKN 128 (320)
Q Consensus 120 l~v~~a~~~ 128 (320)
|+|.||+..
T Consensus 77 l~V~~s~~~ 85 (89)
T d1x4da1 77 VRVHLSQKY 85 (89)
T ss_dssp CEEEEECCC
T ss_pred EEEEECCCc
Confidence 999999754
No 148
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=3.2e-16 Score=116.43 Aligned_cols=66 Identities=12% Similarity=0.232 Sum_probs=60.0
Q ss_pred CCCCeEEEeC--CCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCC
Q 020917 221 PPCNTLFIGN--LGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPS 288 (320)
Q Consensus 221 ~~~~~LfV~N--L~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g 288 (320)
.|+++|||+| |+.++|+++|+++|++||.|..|++.+ +++||||+|.+.++|..|++.|||+.|..
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~--~k~~aFV~f~~~e~A~~A~~~lng~~i~~ 83 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPP--NKPYSFARYRTTEESKRAYVTLNGKEVVD 83 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCT--TCSCEEEEESSHHHHHHHHHHTTTCEEEC
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeecc--CccEEEEEECCHHHHHHHHHHhCCCCCCC
Confidence 3578899965 999999999999999999999999874 57899999999999999999999999853
No 149
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=5.9e-16 Score=115.79 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=63.8
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
.+..+|||+|||+++||+||+++|+.++.+...++.+. ..+|||||+|.+.++|++|++ +|+..|. ||.|+|
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~---gR~i~V 88 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIG---HRYIEI 88 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSS---SSCCEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEc---ceEEEE
Confidence 45668999999999999999999999943333332222 235999999999999999997 9999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
.+++..
T Consensus 89 ~~~~~~ 94 (104)
T d1wg5a_ 89 FKSSRA 94 (104)
T ss_dssp EEECTT
T ss_pred EECCHH
Confidence 999654
No 150
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=6.9e-16 Score=108.27 Aligned_cols=71 Identities=20% Similarity=0.352 Sum_probs=57.2
Q ss_pred eEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYK----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 51 ~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
+|||+|||+++||++|+++|+.|+.+....+... ..+|||||+|.+.++|++|++ +++..|. |+.|.|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~---Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLN---GKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBT---TBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEEC---CCEEEeeEC
Confidence 5999999999999999999999933332222221 135999999999999999998 7999887 899988543
No 151
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.6e-15 Score=113.21 Aligned_cols=78 Identities=12% Similarity=0.108 Sum_probs=65.7
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
....+|||+|||+++|++||+++|+.|+.+...++.. . ..+|||||+|.+.++|++|++ |||..|. ||.|.|
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~---gr~i~V 81 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLN---GREAFV 81 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEET---TEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeEC---CcEEEE
Confidence 3457899999999999999999999996665554433 2 236999999999999999997 9999998 899999
Q ss_pred EEcccc
Q 020917 123 EMAKKN 128 (320)
Q Consensus 123 ~~a~~~ 128 (320)
.++..+
T Consensus 82 ~~~~~~ 87 (103)
T d2cpya1 82 HVVTLE 87 (103)
T ss_dssp EEECHH
T ss_pred EECCHH
Confidence 998544
No 152
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.60 E-value=1.1e-15 Score=107.21 Aligned_cols=72 Identities=11% Similarity=0.103 Sum_probs=58.9
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
.+|||+|||+++++++|+++|+.|+.+....+... +.++||||+|.+.++|.+|+. +||..|+ |+.|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~---g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVG---QNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEET---TEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEEC---CEEEEEEEC
Confidence 47999999999999999999999943332222221 335899999999999999996 8999998 899999865
No 153
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=7.7e-16 Score=107.91 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=56.7
Q ss_pred eEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--------CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEE
Q 020917 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--------GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122 (320)
Q Consensus 51 ~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--------~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v 122 (320)
+|||+|||+++|+++|+++|+.| |.|..++ .+||||||+|.+.++|++|++ +++..+. |+.|.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~----G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~---g~~i~v 72 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGF----GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVG---LSKCEI 72 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHH----SCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBT---TBCCEE
T ss_pred CEEEcCCCCCCCHHHHHHHHHHh----CCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEEC---CEEeEE
Confidence 59999999999999999999999 6664331 236999999999999999997 5777787 799988
Q ss_pred EEc
Q 020917 123 EMA 125 (320)
Q Consensus 123 ~~a 125 (320)
..|
T Consensus 73 k~A 75 (75)
T d1x0fa1 73 KVA 75 (75)
T ss_dssp ECC
T ss_pred EEC
Confidence 754
No 154
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.8e-17 Score=120.84 Aligned_cols=73 Identities=21% Similarity=0.448 Sum_probs=62.9
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEe---------cCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCcee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLR---------QERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~---------~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l 294 (320)
++|||+|||.++||++|+++|++||.|..+.+.. ...+|||||+|.+.++|..|+ .|||..|.| +.|
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~G---r~l 77 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQG---QSL 77 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSS---SCC
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECC---EEE
Confidence 6899999999999999999999999876554431 234899999999999999998 599999999 899
Q ss_pred EEEeec
Q 020917 295 RIQYSK 300 (320)
Q Consensus 295 ~v~~ak 300 (320)
+|+.++
T Consensus 78 ~V~r~k 83 (90)
T d1u2fa_ 78 KIRRPH 83 (90)
T ss_dssp CCBCTT
T ss_pred EECCCC
Confidence 997544
No 155
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=2.2e-15 Score=111.45 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=68.4
Q ss_pred CCCeEEEeCC--CCCCC---------HHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCC
Q 020917 222 PCNTLFIGNL--GESIN---------EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSG 290 (320)
Q Consensus 222 ~~~~LfV~NL--~~~~t---------ee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~ 290 (320)
.+++|+|+|| +.++. ++||++.|++||.|..|++..+..+|+|||+|.+.++|.+|++.|||+.|.|
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~g-- 84 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGG-- 84 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETT--
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECC--
Confidence 4789999999 43321 2689999999999999999887779999999999999999999999999999
Q ss_pred CceeEEEeecCC
Q 020917 291 SVGMRIQYSKNP 302 (320)
Q Consensus 291 ~~~l~v~~ak~~ 302 (320)
|.|+|+|...+
T Consensus 85 -r~i~v~~~~g~ 95 (99)
T d2dita1 85 -RQITAQAWDGT 95 (99)
T ss_dssp -EECEEEECCSC
T ss_pred -EEEEEEEeCCc
Confidence 99999996543
No 156
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.8e-15 Score=114.79 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=64.6
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCH-HHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV-NSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~-~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
+..+||+||++.+|+++|+++|++||.|.+|+|++ ++|||||.|.+. ++|..|+..|||..|.+ +.+.|.|..
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~--~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~---~~~~v~~~~ 84 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVR--GAKEGIILFKEKAKEALGKAKDANNGNLQL---RNKEVTWEV 84 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCT--TCSEEEEEESSCHHHHHHHHHHTTTSCBCT---TSSSEEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEec--CCceEEEEecCcHHHHHHHHHHhcCCceec---CceEEEEee
Confidence 45669999999999999999999999999999984 579999999996 68999999999999998 666666654
No 157
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=6.1e-16 Score=112.29 Aligned_cols=73 Identities=14% Similarity=0.303 Sum_probs=58.1
Q ss_pred CcceEEEcCCCCCCCHHHH---HHHhhhCCCccccEEEee----C---CcceEEEEeCCHHHHHHHHHHhcCceeCcCCC
Q 020917 48 EVRTIFITGLPDDVKEREL---QNLLRWLPGYEASQVNYK----G---EKPMGFALFSTAQLAVAAKDALQEMIFDAETK 117 (320)
Q Consensus 48 ~~~~L~V~nLp~~~tee~L---~~lF~~~~~~~~~iv~~~----~---~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~g 117 (320)
+.++|||+|||+++|++|| +++|+.|+.+....+... . .+|||||+|.+.++|.+|++.|||..++ |
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~---g 83 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVD---G 83 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEET---T
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEEC---C
Confidence 4678999999999999999 667888833333222221 1 1389999999999999999999999998 8
Q ss_pred CeEEEE
Q 020917 118 SVLHTE 123 (320)
Q Consensus 118 r~l~v~ 123 (320)
|.|+|.
T Consensus 84 r~lkvS 89 (89)
T d2cpia1 84 RTLKAS 89 (89)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999973
No 158
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=5.3e-16 Score=115.80 Aligned_cols=76 Identities=17% Similarity=0.119 Sum_probs=63.9
Q ss_pred CCcceEEEcCCCCCC-CH----HHHHHHhhhCCCccccEEEee--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCe
Q 020917 47 DEVRTIFITGLPDDV-KE----RELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSV 119 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~-te----e~L~~lF~~~~~~~~~iv~~~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~ 119 (320)
....+|||+||+.++ ++ ++|+++|+.| |.|+.++ .+++||||+|.+.++|.+|++.|||..|. |+.
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~----G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~---g~~ 75 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTY----DKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFL---GKE 75 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTT----CSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEET---TEE
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhccc----ccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccC---CCE
Confidence 457889999999986 44 4588888888 6665543 46799999999999999999999999998 899
Q ss_pred EEEEEccccc
Q 020917 120 LHTEMAKKNL 129 (320)
Q Consensus 120 l~v~~a~~~~ 129 (320)
|+|.|++...
T Consensus 76 l~v~~a~~~~ 85 (104)
T d1weya_ 76 MKLYFAQTLH 85 (104)
T ss_dssp CEEECCCCSS
T ss_pred eEEeecccCC
Confidence 9999996543
No 159
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.6e-15 Score=114.92 Aligned_cols=75 Identities=7% Similarity=0.032 Sum_probs=63.9
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEE-EecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEE
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV-LRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i-~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~ 297 (320)
...+|||+|||+++|++||+++|+.||.+..+.+ ..+.+ +|+|||+|.+.++|.+|++ |||..|+| +.|.|.
T Consensus 17 ~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~g---R~i~V~ 92 (112)
T d1wela1 17 AGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGN---RFIQVH 92 (112)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTT---SCBEEE
T ss_pred CCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCC---EEEEEE
Confidence 4679999999999999999999999998755333 22222 8999999999999999995 99999999 899998
Q ss_pred eec
Q 020917 298 YSK 300 (320)
Q Consensus 298 ~ak 300 (320)
.+.
T Consensus 93 ~~~ 95 (112)
T d1wela1 93 PIT 95 (112)
T ss_dssp EEC
T ss_pred EcC
Confidence 764
No 160
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=7.7e-17 Score=117.43 Aligned_cols=73 Identities=14% Similarity=0.265 Sum_probs=60.8
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEE-------e--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCe
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVN-------Y--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSV 119 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~-------~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~ 119 (320)
.|+|||+|||+++||++|+++|+.|+.+....+. . ..++|||||+|.+.++|++|++ |||..+. |+.
T Consensus 1 aRrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~---Gr~ 76 (90)
T d1u2fa_ 1 ARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQ---GQS 76 (90)
T ss_dssp CCEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSS---SSC
T ss_pred CCEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEEC---CEE
Confidence 4789999999999999999999999555443321 1 2357999999999999999996 9999998 899
Q ss_pred EEEEEc
Q 020917 120 LHTEMA 125 (320)
Q Consensus 120 l~v~~a 125 (320)
|+|..+
T Consensus 77 l~V~r~ 82 (90)
T d1u2fa_ 77 LKIRRP 82 (90)
T ss_dssp CCCBCT
T ss_pred EEECCC
Confidence 999644
No 161
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=9.3e-17 Score=120.00 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=67.7
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC---cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYS 299 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~---~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~a 299 (320)
+.++|+++..+++|++|+++|++||.|.+|+|.++.. +|+|||+|.+.++|.+|++.|||+.|.| |+|+|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~g---r~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNG---QPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETT---EECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECC---EEEEEEEC
Confidence 4588999999999999999999999999999976543 8999999999999999999999999999 99999986
No 162
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4.6e-16 Score=108.35 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=54.2
Q ss_pred EEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 52 L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
|||+|||.++|+++|+++|+.|+.+....+.. + ..+|||||+|.+.++|++|++.|||..|. |+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~---Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQ---AQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCC---EESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEEC---CEECc
Confidence 89999999999999999999993332222222 1 23599999999999999999999999998 67653
No 163
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.8e-15 Score=112.20 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=65.9
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e--C-CcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K--G-EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~--~-~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
..+..+|||+|||+++|++||+++|+.++.+...++.. . + .+|||||+|.+.++|.+|++ |||..|. ||.|.
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~---gR~i~ 90 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMG---NRFIQ 90 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCST---TSCBE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCC---CEEEE
Confidence 34677999999999999999999999996665544433 2 2 24999999999999999997 9999998 89999
Q ss_pred EEEcccc
Q 020917 122 TEMAKKN 128 (320)
Q Consensus 122 v~~a~~~ 128 (320)
|..+...
T Consensus 91 V~~~~~~ 97 (112)
T d1wela1 91 VHPITKK 97 (112)
T ss_dssp EEEECHH
T ss_pred EEEcChH
Confidence 9988544
No 164
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.9e-15 Score=110.60 Aligned_cols=77 Identities=21% Similarity=0.269 Sum_probs=66.7
Q ss_pred CCCCeEEEeCC--CCCCC--------HHHHHHhhccCCCeeEEEEEecCC------cceEEEEEcCHHHHHHHHHHhCCC
Q 020917 221 PPCNTLFIGNL--GESIN--------EEELRGLFSAQPGFKQMKVLRQER------HTVCFIEFEDVNSASSVHHNLQGA 284 (320)
Q Consensus 221 ~~~~~LfV~NL--~~~~t--------ee~L~~~F~~~G~i~~v~i~~~~~------~g~aFV~F~~~~~A~~Al~~lnG~ 284 (320)
+|+++|.|+|| +.++. .+||++.|++||.|++|+|.++.. .|++||+|.+.++|.+|++.|||+
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 46899999999 44432 267999999999999999975432 589999999999999999999999
Q ss_pred eeCCCCCceeEEEeec
Q 020917 285 VIPSSGSVGMRIQYSK 300 (320)
Q Consensus 285 ~l~g~~~~~l~v~~ak 300 (320)
.|.| |.|+|.|..
T Consensus 82 ~f~g---R~v~v~f~~ 94 (104)
T d1o0pa_ 82 KFAN---RVVVTKYCD 94 (104)
T ss_dssp CSSS---SCCEEEEEC
T ss_pred EECC---eEEEEEEcC
Confidence 9999 999999975
No 165
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.3e-14 Score=107.53 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=61.1
Q ss_pred CCCCcceEEEcC--CCCCCCHHHHHHHhhhCCCccccEEEe--eCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeE
Q 020917 45 AHDEVRTIFITG--LPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120 (320)
Q Consensus 45 ~~~~~~~L~V~n--Lp~~~tee~L~~lF~~~~~~~~~iv~~--~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l 120 (320)
...++++|||+| ||.++|+++|+++|++| |.|..+ ...++||||+|.+.++|.+|++.|||..+...++..+
T Consensus 14 ~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~----G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i~~~~~~~i 89 (101)
T d2cq2a1 14 VSYATQSLVVANGGLGNGVSRNQLLPVLEKC----GLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKI 89 (101)
T ss_dssp CSSCCSEEEEETCTGGGTCCHHHHHHHHHHH----SCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEEECTTSCEE
T ss_pred CCCCCceEEEECCCCCCCCCHHHHHHHHHhh----CcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCCCCCCCcEE
Confidence 346788999955 99999999999999999 777544 4567999999999999999999999999954345554
Q ss_pred EE
Q 020917 121 HT 122 (320)
Q Consensus 121 ~v 122 (320)
.+
T Consensus 90 ~~ 91 (101)
T d2cq2a1 90 TL 91 (101)
T ss_dssp EC
T ss_pred EE
Confidence 44
No 166
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=3.2e-13 Score=95.53 Aligned_cols=71 Identities=6% Similarity=-0.023 Sum_probs=59.5
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCCCc-eeEEEeec
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV-GMRIQYSK 300 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~-~l~v~~ak 300 (320)
.+.|+|+++|++++++ ++++|++||.|.++++. ..+|||||+|.+.++|.+||+ |||..|+| + .|.|.-..
T Consensus 4 ~~wV~V~G~p~~~~~~-il~~F~~~G~I~~~~~~--~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g---~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGFPQASASY-ILLQFAQYGNILKHVMS--NTGNWMHIRYQSKLQARKALS-KDGRIFGE---SIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECCCGGGHHH-HHHHHHTTSCEEEEEEC--SSSSEEEEEESSHHHHHHHHT-TTTCEETT---TEECEEEECC
T ss_pred ccEEEEECCChHHHHH-HHHHHHhhhhhheEEec--CCCCEEEEEEcccHHHHHHHh-cCCCeECC---cEEEEEEeCC
Confidence 4679999999998855 55689999999999985 457999999999999999995 99999998 5 34565443
No 167
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=6.3e-13 Score=108.89 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=64.9
Q ss_pred CCCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e---CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEE
Q 020917 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K---GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121 (320)
Q Consensus 46 ~~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~---~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~ 121 (320)
....++|||+|||..+|+++|+++|+.|+.+....+.. . ..+|||||+|.+.++|.+|++ +++..+. |+.|+
T Consensus 94 ~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~---G~~i~ 169 (183)
T d1u1qa_ 94 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVN---GHNCE 169 (183)
T ss_dssp TCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEET---TEEEE
T ss_pred ccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeEC---CEEEE
Confidence 35578999999999999999999999994443322222 1 135999999999999999997 7898887 89999
Q ss_pred EEEccccc
Q 020917 122 TEMAKKNL 129 (320)
Q Consensus 122 v~~a~~~~ 129 (320)
|.+|.++.
T Consensus 170 V~~A~~k~ 177 (183)
T d1u1qa_ 170 VRKALSKQ 177 (183)
T ss_dssp EEECCCHH
T ss_pred EEecCCcc
Confidence 99997653
No 168
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=9.8e-13 Score=96.87 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=62.6
Q ss_pred CCcceEEEcCC--CCCCC---------HHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcC
Q 020917 47 DEVRTIFITGL--PDDVK---------ERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAE 115 (320)
Q Consensus 47 ~~~~~L~V~nL--p~~~t---------ee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~ 115 (320)
...++|+|.|| |.++. ++||++.|++|+.+....+.....+|||||+|.+.++|.+|++.|||..|+
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~-- 83 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG-- 83 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEET--
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEEC--
Confidence 46899999999 55432 367889999994443322222345699999999999999999999999998
Q ss_pred CCCeEEEEEccccc
Q 020917 116 TKSVLHTEMAKKNL 129 (320)
Q Consensus 116 ~gr~l~v~~a~~~~ 129 (320)
||.|+|+|...+.
T Consensus 84 -gr~i~v~~~~g~~ 96 (99)
T d2dita1 84 -GRQITAQAWDGTT 96 (99)
T ss_dssp -TEECEEEECCSCC
T ss_pred -CEEEEEEEeCCcC
Confidence 8999999986543
No 169
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=7.5e-13 Score=99.98 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=59.3
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--CCcceEEEEeCCH-HHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTA-QLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~~kg~aFV~F~~~-e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
...+||||||+.+|+++|+++|+.| |.|..++ ..+|||||.|.+. ++|.+|+..||+..+. ++.+.|.|+
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~f----G~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~---~~~~~v~~~ 83 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNH----GEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQ---LRNKEVTWE 83 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSS----CCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBC---TTSSSEEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhc----CChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCcee---cCceEEEEe
Confidence 4566999999999999999999999 8775553 4579999999996 6899999999999886 456666665
Q ss_pred cc
Q 020917 126 KK 127 (320)
Q Consensus 126 ~~ 127 (320)
..
T Consensus 84 ~~ 85 (113)
T d1owxa_ 84 VL 85 (113)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 170
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=1.3e-13 Score=102.52 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=61.0
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-e--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEc
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-K--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMA 125 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a 125 (320)
..++|++++.+++|++|+++|++|+.++...|.. . ..+|||||+|.+.++|.+|++.|||..|. ||+|+|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~---gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFN---GQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEET---TEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEEC---CEEEEEEEC
Confidence 5689999999999999999999994333332211 1 23699999999999999999999999998 899999986
No 171
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.26 E-value=6.6e-12 Score=88.62 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=59.2
Q ss_pred cceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEee--CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCe-EEEEEc
Q 020917 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSV-LHTEMA 125 (320)
Q Consensus 49 ~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~--~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~-l~v~~a 125 (320)
.+.|+|+|||++.+++.| +.|+.| |.|+.++ ..+|||||+|.+.++|++||+ +||..|. |+. |.|..+
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~----G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~---g~~~vgV~~~ 74 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQY----GNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFG---ESIMIGVKPC 74 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTT----SCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEET---TTEECEEEEC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhh----hhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeEC---CcEEEEEEeC
Confidence 567999999999997666 579999 8887775 357999999999999999997 9999997 675 468777
Q ss_pred ccc
Q 020917 126 KKN 128 (320)
Q Consensus 126 ~~~ 128 (320)
.++
T Consensus 75 ~~k 77 (81)
T d1wwha1 75 IDK 77 (81)
T ss_dssp CCH
T ss_pred CCh
Confidence 554
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=1.9e-11 Score=90.60 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=61.3
Q ss_pred CCcceEEEcCC--CCCC--------CHHHHHHHhhhCCCccccEEEee----------CCcceEEEEeCCHHHHHHHHHH
Q 020917 47 DEVRTIFITGL--PDDV--------KERELQNLLRWLPGYEASQVNYK----------GEKPMGFALFSTAQLAVAAKDA 106 (320)
Q Consensus 47 ~~~~~L~V~nL--p~~~--------tee~L~~lF~~~~~~~~~iv~~~----------~~kg~aFV~F~~~e~A~~A~~~ 106 (320)
.|++.|.|.|| +..+ ..+||++.|++| |.|..+. ..+|++||+|.+.++|.+|++.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~----G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~ 77 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKY----GLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQG 77 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTT----SCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhccc----CceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHH
Confidence 46899999999 4433 346789999999 5554431 1248999999999999999999
Q ss_pred hcCceeCcCCCCeEEEEEccccc
Q 020917 107 LQEMIFDAETKSVLHTEMAKKNL 129 (320)
Q Consensus 107 lng~~~~~~~gr~l~v~~a~~~~ 129 (320)
|||..+. ||.|+|.|.....
T Consensus 78 l~Gr~f~---gR~v~v~f~~~~~ 97 (104)
T d1o0pa_ 78 LTGRKFA---NRVVVTKYCDPDS 97 (104)
T ss_dssp HSSCCSS---SSCCEEEEECHHH
T ss_pred HCCCEEC---CeEEEEEEcCHHH
Confidence 9999998 8999999986543
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.93 E-value=1.9e-05 Score=51.79 Aligned_cols=64 Identities=14% Similarity=0.242 Sum_probs=53.7
Q ss_pred CCCHHH----HHHhhccCCCeeEEEEEecCC-cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCceeEEEeec
Q 020917 234 SINEEE----LRGLFSAQPGFKQMKVLRQER-HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYSK 300 (320)
Q Consensus 234 ~~tee~----L~~~F~~~G~i~~v~i~~~~~-~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~~l~v~~ak 300 (320)
.+++.| |.+.|.++|.|+++.|....+ .-.|-|...+..+|..|+..||-+.|++ |+|.|+|+.
T Consensus 3 ~L~~kelqq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~---KRI~Vs~~~ 71 (73)
T d2dgxa1 3 RLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGS---KKILVSLAT 71 (73)
T ss_dssp TSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETT---EEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCC---eEEEEEEec
Confidence 345554 457899999999999975433 4589999999999999999999999999 999999974
No 174
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.84 E-value=2.1e-05 Score=54.31 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=57.5
Q ss_pred CCCCCeEEEeCCCCC------CCH---HHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeCCCC
Q 020917 220 NPPCNTLFIGNLGES------INE---EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSG 290 (320)
Q Consensus 220 ~~~~~~LfV~NL~~~------~te---e~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~ 290 (320)
+||--|+.|.=.... .+| ++|.+.|..||+|.-||++. +.-.|+|.+-.+|..|++ |+|.++.|
T Consensus 12 GPpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~----d~mwVTF~dG~SAL~al~-l~g~~v~G-- 84 (95)
T d1ufwa_ 12 GPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQ----GQMLVTFADSHSALSVLD-VDGMKVKG-- 84 (95)
T ss_dssp CCTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEET----TEEEEECSCSHHHHHHHH-GGGSEETT--
T ss_pred CCCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeC----CeEEEEECCcHHHHHHhc-cCCeEEcc--
Confidence 345667777533322 222 57889999999999999985 458999999999999995 99999999
Q ss_pred CceeEEEee
Q 020917 291 SVGMRIQYS 299 (320)
Q Consensus 291 ~~~l~v~~a 299 (320)
+.|+|+..
T Consensus 85 -~~l~It~~ 92 (95)
T d1ufwa_ 85 -RAVKISGP 92 (95)
T ss_dssp -EEEEEECC
T ss_pred -eEEEEecC
Confidence 99999753
No 175
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=0.00023 Score=49.70 Aligned_cols=76 Identities=12% Similarity=0.291 Sum_probs=62.2
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCC------cceEEEEEcCHHHHHHHHHHhCCCeeCCCCCc--eeE
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER------HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV--GMR 295 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~------~g~aFV~F~~~~~A~~Al~~lnG~~l~g~~~~--~l~ 295 (320)
+.|.|++||+.+||+++.+.++..|.+.....+.... -.-|+|.|.+.++...-.+.++|+.|-+.... +=.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 5689999999999999999999999999888875432 23799999999999999999999999764212 235
Q ss_pred EEee
Q 020917 296 IQYS 299 (320)
Q Consensus 296 v~~a 299 (320)
|+||
T Consensus 82 VE~A 85 (91)
T d1uw4a_ 82 VEFA 85 (91)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6665
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=0.00059 Score=47.53 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=55.3
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe-----eC----Cc-ceEEEEeCCHHHHHHHHHHhcCceeCcCCCC-
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----KG----EK-PMGFALFSTAQLAVAAKDALQEMIFDAETKS- 118 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~-----~~----~k-g~aFV~F~~~e~A~~A~~~lng~~~~~~~gr- 118 (320)
.+|.|+.||+.+||+++.+.+... +.+-.. +. .. .-|+|.|.+.++.....+..+|..|.++.|.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~----~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~ 77 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPM----PEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQE 77 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSC----CCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCc----CceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCE
Confidence 479999999999999999999877 443222 11 11 7899999999999999999999999654553
Q ss_pred -eEEEEEc
Q 020917 119 -VLHTEMA 125 (320)
Q Consensus 119 -~l~v~~a 125 (320)
+-.|+||
T Consensus 78 ~~a~VE~A 85 (91)
T d1uw4a_ 78 YPAIVEFA 85 (91)
T ss_dssp EECEEEEC
T ss_pred eeeEEEEc
Confidence 2345665
No 177
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.90 E-value=0.00082 Score=46.16 Aligned_cols=71 Identities=14% Similarity=0.103 Sum_probs=51.0
Q ss_pred CCcceEEEcCCCCCCCH---------HHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCceeCcCCC
Q 020917 47 DEVRTIFITGLPDDVKE---------RELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETK 117 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~te---------e~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~g 117 (320)
++..||.|.=......+ .+|.+.|..| |.|+-++--.+.-.|+|.+-++|.+|++ ++|..+. |
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~----GeViLvRFv~d~mwVTF~dG~SAL~al~-l~g~~v~---G 84 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSY----GTIVLVRINQGQMLVTFADSHSALSVLD-VDGMKVK---G 84 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHH----SCCSEEEEETTEEEEECSCSHHHHHHHH-GGGSEET---T
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhC----CeEEEEEEeCCeEEEEECCcHHHHHHhc-cCCeEEc---c
Confidence 45667888555433322 3566677777 6554443223689999999999999998 9999998 8
Q ss_pred CeEEEEEc
Q 020917 118 SVLHTEMA 125 (320)
Q Consensus 118 r~l~v~~a 125 (320)
+.|+|...
T Consensus 85 ~~l~It~~ 92 (95)
T d1ufwa_ 85 RAVKISGP 92 (95)
T ss_dssp EEEEEECC
T ss_pred eEEEEecC
Confidence 99998643
No 178
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.45 E-value=0.0053 Score=39.91 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHhhhCCCccccEEEee-----CCcceEEEEeCCHHHHHHHHHHhcCceeCcCCCCeEEEEEcc
Q 020917 59 DDVKERELQNLLRWLPGYEASQVNYK-----GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126 (320)
Q Consensus 59 ~~~tee~L~~lF~~~~~~~~~iv~~~-----~~kg~aFV~F~~~e~A~~A~~~lng~~~~~~~gr~l~v~~a~ 126 (320)
+.+.+.+|++++...+...+.|+.+. ...-.|-|...+..+|.-|++.|+..+|+ +|.|.|.|+.
T Consensus 2 ~~L~~kelqq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG---~KRI~Vs~~~ 71 (73)
T d2dgxa1 2 YRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIG---SKKILVSLAT 71 (73)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEET---TEEEEEEECC
T ss_pred CcCCHHHHHHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcC---CeEEEEEEec
Confidence 44566666654444433338886662 22478999999999999999999999998 6999999874
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.43 E-value=0.046 Score=37.80 Aligned_cols=58 Identities=14% Similarity=0.193 Sum_probs=48.3
Q ss_pred CCcceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhc
Q 020917 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108 (320)
Q Consensus 47 ~~~~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~ln 108 (320)
+...-||.-.+|..+...||.++|+.|+.+...-|..+ .|||...+.++|+.++..+.
T Consensus 13 p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswIddT----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 13 PKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDT----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEETT----EEEEECSCHHHHHHHHHHHH
T ss_pred CCcceeEEEeCCcccchhHHHHHhcCCCceEEEEecCc----eEEEEecCHHHHHHHHHHhc
Confidence 44567999999999999999999999966555555443 79999999999999998654
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.06 E-value=0.79 Score=31.37 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=46.1
Q ss_pred CCCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhC
Q 020917 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282 (320)
Q Consensus 222 ~~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~ln 282 (320)
...-+|.-..|..=...||.++|+.||.|.---| .+ .-|||...+.++|..+++.+.
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd---TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD---TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET---TEEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC---ceEEEEecCHHHHHHHHHHhc
Confidence 3556888899999999999999999998754434 33 459999999999999987654
No 181
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=71.12 E-value=3.6 Score=28.91 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=28.9
Q ss_pred HHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhc
Q 020917 66 LQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108 (320)
Q Consensus 66 L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~ln 108 (320)
+++.+..+ +. .+|+++-...|..|.+.++|.+|.+.+.
T Consensus 62 ~~~~L~~~----g~-~~MSGSGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 62 VLSWLLEY----AP-SRLTGTGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHTTT----SC-EEECTTSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHhhc----cc-ceecCCCCEEEEEeCCHHHHHHHHHHcC
Confidence 34444444 44 4677777899999999999999999774
No 182
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=70.25 E-value=4.9 Score=27.99 Aligned_cols=43 Identities=26% Similarity=0.274 Sum_probs=32.1
Q ss_pred HHHHHHhhhCCCccccE-EEeeCCcceEEEEeCCHHHHHHHHHHhcCc
Q 020917 64 RELQNLLRWLPGYEASQ-VNYKGEKPMGFALFSTAQLAVAAKDALQEM 110 (320)
Q Consensus 64 e~L~~lF~~~~~~~~~i-v~~~~~kg~aFV~F~~~e~A~~A~~~lng~ 110 (320)
+++++.+..+ +.. +.|+++-...|..|.+.++|+++.+.|...
T Consensus 66 ~~~~~~l~~~----g~~~~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRAL----GLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHT----TCEEEEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHh----hhhheeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3445555555 544 667777788999999999999999988654
No 183
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=67.63 E-value=11 Score=23.61 Aligned_cols=59 Identities=12% Similarity=0.084 Sum_probs=38.8
Q ss_pred EEEeCCCCCCCHHHHHHhhccCC-CeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCeeC
Q 020917 226 LFIGNLGESINEEELRGLFSAQP-GFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIP 287 (320)
Q Consensus 226 LfV~NL~~~~tee~L~~~F~~~G-~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l~ 287 (320)
+++.|=|-. =.++.+.|.+.| .|..+......+++..-+..+|.+.|.++++ -+|+.+-
T Consensus 4 V~v~d~pG~--L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~-~~G~~vl 63 (71)
T d2f06a1 4 ISCPNVPGA--LAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLK-EKKVDLL 63 (71)
T ss_dssp EEEESSTTH--HHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHH-HTTCEEE
T ss_pred EEecCCccH--HHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHH-HCCCEEE
Confidence 444444432 245778888888 6888888766556655666678887777775 4666543
No 184
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=62.70 E-value=7.2 Score=27.22 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=31.7
Q ss_pred HHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhC
Q 020917 238 EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282 (320)
Q Consensus 238 e~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~ln 282 (320)
.++++.+..+|. ++ +. ++...+|..|.+.++|..|.+.|.
T Consensus 60 ~~~~~~L~~~g~---~~-MS-GSGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SR-LT-GTGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSC---EE-EC-TTSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhccc---ce-ec-CCCCEEEEEeCCHHHHHHHHHHcC
Confidence 466777788886 33 43 556799999999999999999885
No 185
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=55.72 E-value=17 Score=22.97 Aligned_cols=61 Identities=8% Similarity=0.039 Sum_probs=42.6
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCC-CeeEEEEEecCCcceEEEEEc-C---HHHHHHHHHHhCC
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQP-GFKQMKVLRQERHTVCFIEFE-D---VNSASSVHHNLQG 283 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G-~i~~v~i~~~~~~g~aFV~F~-~---~~~A~~Al~~lnG 283 (320)
.++|+|.|-+..=---.+-.+|+.+| +|....+.+....|.|++.+. | .++....++.+.|
T Consensus 3 G~~L~i~~~D~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g~~a~~vi~vD~~~~~~vl~~I~~~~~ 68 (78)
T d1ygya3 3 GINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVD 68 (78)
T ss_dssp SEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHT
T ss_pred ceEEEEEeCCcCCHHHHHHHHHHhcCcChhhheeeecCCCCeEEEEEEcCCCccHHHHHHHHcCCC
Confidence 57888888776656678889999999 688888876666665655554 2 4555556665554
No 186
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=55.08 E-value=22 Score=22.70 Aligned_cols=60 Identities=13% Similarity=0.111 Sum_probs=40.0
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCC-CeeEEEEEecCCcceEEEEEc-CHHHHHHHHHHhC
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQP-GFKQMKVLRQERHTVCFIEFE-DVNSASSVHHNLQ 282 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G-~i~~v~i~~~~~~g~aFV~F~-~~~~A~~Al~~ln 282 (320)
.++|.|.|-+..=--..+-++|..+| .|.+..+.+..+.|++.+.++ |.+....+++.|.
T Consensus 11 ~~rl~i~~~d~PGvla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i~~D~~~~~~v~~~i~ 72 (84)
T d1sc6a3 11 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMK 72 (84)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEEECCCCCHHHHHHHHH
Confidence 46777765544444578889999988 688887776556789998886 3333444455553
No 187
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=48.03 E-value=17 Score=24.98 Aligned_cols=44 Identities=18% Similarity=0.096 Sum_probs=34.0
Q ss_pred HHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCC
Q 020917 238 EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 284 (320)
Q Consensus 238 e~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~ 284 (320)
+++++.+..+|... +.+ .++...+|.-|.+.++|.++.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~m--SGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLM--SGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEE--CTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eee--cCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 67777788887643 444 245578999999999999999998755
No 188
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=40.84 E-value=36 Score=20.97 Aligned_cols=59 Identities=8% Similarity=0.100 Sum_probs=38.7
Q ss_pred eEEEeCCCCCCCHHHHHHhhccCC-CeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCCee
Q 020917 225 TLFIGNLGESINEEELRGLFSAQP-GFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286 (320)
Q Consensus 225 ~LfV~NL~~~~tee~L~~~F~~~G-~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~~l 286 (320)
.+|+-|=|-. =.++..+|.+.| .|.++.+....+.|+.-+...+.+.|...+. -+|+.+
T Consensus 7 sV~~eNkpG~--L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~-~~g~~v 66 (70)
T d2f06a2 7 SIFLENKSGR--LTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALK-DNHFAV 66 (70)
T ss_dssp EEEECSSSSH--HHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHH-HTTCCE
T ss_pred EEEEeCCCcH--HHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHH-HCCCEE
Confidence 4777776654 367889999988 6888888654444444444567777777664 345543
No 189
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=38.65 E-value=37 Score=20.48 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=44.6
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEc----CHHHHHHHHHHhCCCee
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE----DVNSASSVHHNLQGAVI 286 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~----~~~~A~~Al~~lnG~~l 286 (320)
.+|.|.||.=..=..-|...+++...|.++.+- -..+.+.|+|. +.++-.++++.+ |+.+
T Consensus 4 ~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~--~~~~~v~v~~d~~~~~~~~i~~~i~~~-Gy~~ 67 (69)
T d2qifa1 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVN--LEAGKVDVSFDADKVSVKDIADAIEDQ-GYDV 67 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEE--TTTTEEEEEECTTTCCHHHHHHHHHHT-TCEE
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCceEEEEE--CCCCEEEEEECCCCCCHHHHHHHHHHh-CCcc
Confidence 468888887655557888999999999999984 44577999995 455566677664 6654
No 190
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=36.31 E-value=14 Score=22.88 Aligned_cols=20 Identities=15% Similarity=0.204 Sum_probs=14.2
Q ss_pred ccccEEEeeCCcceEEEEeC
Q 020917 76 YEASQVNYKGEKPMGFALFS 95 (320)
Q Consensus 76 ~~~~iv~~~~~kg~aFV~F~ 95 (320)
..|.|......||||||.-.
T Consensus 4 ~~G~Vk~f~~~kGfGFI~~d 23 (69)
T d1mjca_ 4 MTGIVKWFNADKGFGFITPD 23 (69)
T ss_dssp EEEEEEEEETTTTEEEEEET
T ss_pred EEEEEEEEeCCCCEEEEEEc
Confidence 34555555778899999864
No 191
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=34.59 E-value=16 Score=22.38 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=14.1
Q ss_pred ccEEEeeCCcceEEEEeCC
Q 020917 78 ASQVNYKGEKPMGFALFST 96 (320)
Q Consensus 78 ~~iv~~~~~kg~aFV~F~~ 96 (320)
|.|......||||||.-.+
T Consensus 3 G~Vk~f~~~kGfGFI~~~~ 21 (66)
T d1g6pa_ 3 GKVKWFDSKKGYGFITKDE 21 (66)
T ss_dssp EEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeCCCCeeEEEecC
Confidence 5566667788999998543
No 192
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.76 E-value=13 Score=23.78 Aligned_cols=18 Identities=11% Similarity=0.089 Sum_probs=12.8
Q ss_pred ccEEEeeCCcceEEEEeC
Q 020917 78 ASQVNYKGEKPMGFALFS 95 (320)
Q Consensus 78 ~~iv~~~~~kg~aFV~F~ 95 (320)
|.|-.....||||||+-.
T Consensus 11 G~VKwfn~~KGfGFI~~d 28 (79)
T d1h95a_ 11 GTVKWFNVRNGYGFINRN 28 (79)
T ss_dssp EEEEEEETTTTEEEEEEG
T ss_pred EEEEEEcCCCCeEEEEEC
Confidence 455455677899999853
No 193
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=31.02 E-value=9.7 Score=20.08 Aligned_cols=12 Identities=25% Similarity=0.495 Sum_probs=10.2
Q ss_pred CHHHHHHHhhhC
Q 020917 62 KERELQNLLRWL 73 (320)
Q Consensus 62 tee~L~~lF~~~ 73 (320)
+|++|++.|..|
T Consensus 1 seeel~eAF~~F 12 (33)
T d2hf5a1 1 SEEEIREAFRVF 12 (33)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 578899999888
No 194
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.35 E-value=60 Score=20.06 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=45.5
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEc----CHHHHHHHHHHhCCCe
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE----DVNSASSVHHNLQGAV 285 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~----~~~~A~~Al~~lnG~~ 285 (320)
.-+|.|.||.=..=..-|...+.+...|.++++- -..+.+-|+|. +.++-.++++.+ |+.
T Consensus 9 ~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~--~~~~~v~v~~d~~~~~~~~i~~~i~~~-GY~ 72 (79)
T d1kvja_ 9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVS--LEEKNATIIYDPKLQTPKTLQEAIDDM-GFD 72 (79)
T ss_dssp EEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEE--TTTTEEEEEECTTTCCHHHHHHHHHHH-TCE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCceEEEEE--CCCCEEEEEECCCCCCHHHHHHHHHhc-CCC
Confidence 4578899998776667888999999999999884 34567899995 556666677654 554
No 195
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=29.13 E-value=56 Score=19.71 Aligned_cols=61 Identities=8% Similarity=0.105 Sum_probs=45.5
Q ss_pred CCeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcC----HHHHHHHHHHhCCCee
Q 020917 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED----VNSASSVHHNLQGAVI 286 (320)
Q Consensus 223 ~~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~----~~~A~~Al~~lnG~~l 286 (320)
..+|-|.||.=..=...|.+.+.+.-.|.++.+-. ..+.+.|.|.. .++-.++++.+ ||++
T Consensus 7 ~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~--~~~~~~v~~d~~~~~~~~i~~~i~~~-Gy~v 71 (72)
T d1p6ta1 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL--ATETVNVIYDPAETGTAAIQEKIEKL-GYHV 71 (72)
T ss_dssp EEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEG--GGTEEEEEECTTTSCHHHHHHHHHHH-TCEE
T ss_pred EEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEc--CCCEEEEEECCCCCCHHHHHHHHHHh-CCcc
Confidence 45688999887666678899999999999998853 34679999953 55666677655 5543
No 196
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=26.83 E-value=18 Score=23.26 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=39.4
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEe---eCCcceEEEEeCCHHHHHH
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAVA 102 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~---~~~kg~aFV~F~~~e~A~~ 102 (320)
.+-|+-..+.+++..+|+..++.++++...-++. .+.+--|||.+.....|..
T Consensus 21 ~n~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~d 76 (81)
T d1vqos1 21 QNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQE 76 (81)
T ss_dssp SCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHH
T ss_pred CCEEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHH
Confidence 4567888899999999999999997765544443 2334679999987766554
No 197
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=26.47 E-value=25 Score=21.42 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=13.4
Q ss_pred ccEEEeeCCcceEEEEeCC
Q 020917 78 ASQVNYKGEKPMGFALFST 96 (320)
Q Consensus 78 ~~iv~~~~~kg~aFV~F~~ 96 (320)
|.|......||||||.-.+
T Consensus 4 G~Vk~fn~~kGfGFI~~d~ 22 (66)
T d1c9oa_ 4 GKVKWFNNEKGYGFIEVEG 22 (66)
T ss_dssp EEEEEEETTTTEEEEEETT
T ss_pred eEEEEEECCCCEEEEEecC
Confidence 4455556778999998643
No 198
>d1sfea2 c.55.7.1 (A:12-92) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=25.94 E-value=49 Score=20.57 Aligned_cols=21 Identities=10% Similarity=0.098 Sum_probs=17.1
Q ss_pred ccEEEeeCCcceEEEEeCCHH
Q 020917 78 ASQVNYKGEKPMGFALFSTAQ 98 (320)
Q Consensus 78 ~~iv~~~~~kg~aFV~F~~~e 98 (320)
|.++...+.+|.++|.|.+..
T Consensus 13 G~llvaat~~Glc~i~F~d~~ 33 (81)
T d1sfea2 13 GRCLVAESERGICAILLGDDD 33 (81)
T ss_dssp EEEEEEECSSSEEEEEEESCH
T ss_pred eeEEEEEcCCcEEEEEEecCh
Confidence 777777888999999996633
No 199
>d2odgc1 a.140.1.1 (C:2-47) Inner nuclear membrane protein emerin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73 E-value=21 Score=20.06 Aligned_cols=24 Identities=29% Similarity=0.300 Sum_probs=20.4
Q ss_pred CCCHHHHHHHhhhCCCccccEEEe
Q 020917 60 DVKERELQNLLRWLPGYEASQVNY 83 (320)
Q Consensus 60 ~~tee~L~~lF~~~~~~~~~iv~~ 83 (320)
.++.++|..++..|....|.||..
T Consensus 5 ~lSd~El~~lL~~y~I~HGPvVds 28 (46)
T d2odgc1 5 DLSDTELTTLLRRYNIPHGPVVGS 28 (46)
T ss_dssp GSCHHHHHHHHHHTTCCCCCCCHH
T ss_pred hhcHHHHHHHHHHhCCCCCCcccc
Confidence 467899999999998888888754
No 200
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.11 E-value=28 Score=25.82 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=0.0
Q ss_pred CCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHHHhcCc
Q 020917 60 DVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110 (320)
Q Consensus 60 ~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~~lng~ 110 (320)
+++++|+.+.| .. |.|||.+-++++|+++++.++..
T Consensus 118 ~vs~~EM~~tF-Nm--------------GIGmvliV~~~~~~~v~~~l~~~ 153 (175)
T d1clia2 118 NVEHHEMYRTF-NC--------------GVGMIIALPAPEVDKALALLNAN 153 (175)
T ss_dssp TCCHHHHHHHC-CT--------------TEEEEEEECGGGHHHHHHHHHTT
T ss_pred CccHhhHhhee-cC--------------cceEEEEECHHHHHHHHHHHHHc
No 201
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=23.06 E-value=78 Score=19.25 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=42.0
Q ss_pred CHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCCC
Q 020917 236 NEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 284 (320)
Q Consensus 236 tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG~ 284 (320)
..+++.+....+.+|..+..+.....-+.-|.+.|.++-..-++.|.|.
T Consensus 14 ~~~~~~~~i~~~peV~e~~~vtG~~D~il~v~~~d~~~l~~~i~~l~~v 62 (77)
T d2cfxa2 14 DYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFINKTSPY 62 (77)
T ss_dssp CHHHHHHHHHTCTTEEEEEEEESSSSEEEEEEESSHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHhcCchheEEEEEcCCCCEEEEEEECCHHHHHHHHhhCCCc
Confidence 5788999999999999999997655678999999999999888887654
No 202
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.50 E-value=24 Score=28.32 Aligned_cols=24 Identities=17% Similarity=0.149 Sum_probs=19.7
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhC
Q 020917 50 RTIFITGLPDDVKERELQNLLRWL 73 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~ 73 (320)
....|+||||.++..=|..++...
T Consensus 87 ~~~vV~NLPY~Iss~il~~~~~~~ 110 (278)
T d1zq9a1 87 FDTCVANLPYQISSPFVFKLLLHR 110 (278)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCS
T ss_pred hhhhhcchHHHHHHHHHHHHHhhC
Confidence 347899999999998888877654
No 203
>d2od4a1 d.58.4.20 (A:1-100) Hypothetical protein GOS_3280838 {environmental samples}
Probab=21.85 E-value=74 Score=20.91 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=28.6
Q ss_pred cCCCeeEEEEEecCCcceEEEEEcCHHHHHHHHHHhCC
Q 020917 246 AQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283 (320)
Q Consensus 246 ~~G~i~~v~i~~~~~~g~aFV~F~~~~~A~~Al~~lnG 283 (320)
..|.+....+....++++....|.|.+.|.++++.+..
T Consensus 40 ~~G~l~~~~~~iSen~~~~I~~fpdK~tAdk~~~~~~~ 77 (100)
T d2od4a1 40 SLGAISAEFVQSNENSGMYIIHYPDKQTAISVFDKIKP 77 (100)
T ss_dssp HHTCSEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hCCCeEEEEEEecCCeEEEEEEeCCHHHHHHHHHHHHH
Confidence 35766655555456789999999999999999875543
No 204
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=21.67 E-value=24 Score=27.91 Aligned_cols=44 Identities=7% Similarity=0.114 Sum_probs=29.1
Q ss_pred ceEEEcCCCCCCCHHHHHHHhhhCCCccccEEEeeCCcceEEEEeCCHHHHHHHHH
Q 020917 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105 (320)
Q Consensus 50 ~~L~V~nLp~~~tee~L~~lF~~~~~~~~~iv~~~~~kg~aFV~F~~~e~A~~A~~ 105 (320)
....|||||++++.+=|..++... ..+. ..|-+-..|.|++-..
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~~----~~~~--------~~~~m~QkEvA~Ri~A 134 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSYT----DAIA--------DMHFMLQKEVVNRLVA 134 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTTG----GGEE--------EEEEEEEHHHHHHHHC
T ss_pred CeEEEecchHHHHHHHHHHhcccc----ccee--------hhhhhhhHHHHHHhcc
Confidence 457899999999998877777544 2221 1244445677777543
No 205
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.43 E-value=87 Score=18.80 Aligned_cols=56 Identities=11% Similarity=0.197 Sum_probs=39.6
Q ss_pred CeEEEeCCCCCCCHHHHHHhhccCCCeeEEEEEecCCcceEEEEEcC---HHHHHHHHHHh
Q 020917 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED---VNSASSVHHNL 281 (320)
Q Consensus 224 ~~LfV~NL~~~~tee~L~~~F~~~G~i~~v~i~~~~~~g~aFV~F~~---~~~A~~Al~~l 281 (320)
.+|.|.+|.=..=..-+...+.+...|.++.+- -..+.+.|.|.+ .++...++..+
T Consensus 4 v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~--~~~~~~~v~~~~~~~~~~i~~~i~~~ 62 (72)
T d2ggpb1 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDIS--LVTNECQVTYDNEVTADSIKEIIEDC 62 (72)
T ss_dssp EEEECTTCCSSTTTHHHHHHHTTSTTEEEEEEC--TTTCEEEEEECSSCCHHHHHHHHHHT
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEE--CCCCEEEEEECCCCCHHHHHHHHHHh
Confidence 356777877655567888899999999999884 445779999974 34445555543
No 206
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=20.38 E-value=89 Score=20.67 Aligned_cols=48 Identities=8% Similarity=-0.040 Sum_probs=29.7
Q ss_pred cCCCCCCCHHHHHHHhhhCCCccccEEEe---e----CCc--ceEEEEeCCHHHHHHH
Q 020917 55 TGLPDDVKERELQNLLRWLPGYEASQVNY---K----GEK--PMGFALFSTAQLAVAA 103 (320)
Q Consensus 55 ~nLp~~~tee~L~~lF~~~~~~~~~iv~~---~----~~k--g~aFV~F~~~e~A~~A 103 (320)
.....+.+..+|++.+....+.....+.+ + ..+ |||+| |.|.+.|.+-
T Consensus 24 ~h~g~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~k~~ 80 (101)
T d1xn9a_ 24 KYEGSTPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAKL-YEDADRMKQV 80 (101)
T ss_dssp ECSSSCCCHHHHHHHHHHHTTCCTTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHhHCcCcCEEEEEcCcccCCCceEEEEEEE-ECCHHHHHhh
Confidence 34445778889998888775554443333 2 122 77765 7777777654
Done!