Query 020919
Match_columns 320
No_of_seqs 278 out of 2042
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 06:11:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020919.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020919hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 5.7E-81 1.2E-85 551.7 17.5 287 17-312 2-289 (303)
2 PTZ00480 serine/threonine-prot 100.0 6.1E-77 1.3E-81 560.3 32.1 301 14-314 7-307 (320)
3 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.1E-75 2.3E-80 548.5 30.3 291 18-308 2-292 (293)
4 KOG0374 Serine/threonine speci 100.0 4.3E-76 9.4E-81 556.3 25.8 295 14-308 5-303 (331)
5 PTZ00244 serine/threonine-prot 100.0 2.7E-75 5.8E-80 545.4 29.9 291 17-307 3-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.1E-74 2.5E-79 545.5 31.7 284 13-305 2-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.4E-74 3.1E-79 539.0 29.1 283 18-309 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 6E-74 1.3E-78 538.0 30.0 287 18-313 3-291 (303)
9 cd07417 MPP_PP5_C PP5, C-termi 100.0 2E-73 4.4E-78 537.6 29.5 297 4-309 1-305 (316)
10 smart00156 PP2Ac Protein phosp 100.0 2.4E-72 5.3E-77 521.5 30.3 270 39-308 1-270 (271)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 5.5E-72 1.2E-76 526.5 31.0 283 18-309 3-298 (305)
12 KOG0373 Serine/threonine speci 100.0 1.5E-72 3.2E-77 491.4 16.6 293 14-315 2-296 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.1E-70 2.3E-75 519.5 28.5 287 21-307 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 9.5E-68 2.1E-72 505.7 31.7 299 9-308 3-366 (377)
15 KOG0375 Serine-threonine phosp 100.0 6.4E-65 1.4E-69 469.4 12.5 270 38-308 60-342 (517)
16 KOG0371 Serine/threonine prote 100.0 4.6E-64 9.9E-69 446.8 13.4 290 17-315 19-309 (319)
17 KOG0377 Protein serine/threoni 100.0 2.2E-59 4.8E-64 441.5 14.5 304 3-315 106-439 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.8E-49 3.9E-54 381.5 13.9 271 38-309 182-459 (476)
19 cd00144 MPP_PPP_family phospho 100.0 7E-37 1.5E-41 275.3 20.8 214 69-293 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 100.0 2.4E-27 5.2E-32 212.4 17.5 175 69-278 1-196 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 3E-26 6.6E-31 210.2 18.8 121 67-189 2-146 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 7.5E-25 1.6E-29 198.2 17.2 115 69-186 2-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 2.8E-24 6E-29 199.9 18.7 217 67-297 2-261 (275)
24 cd07423 MPP_PrpE Bacillus subt 99.9 3.6E-24 7.8E-29 195.0 17.9 120 67-189 2-143 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 1.8E-24 3.9E-29 199.2 12.9 119 68-190 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 7.7E-24 1.7E-28 195.9 12.5 120 67-190 2-128 (279)
27 PRK11439 pphA serine/threonine 99.9 3.2E-23 7E-28 186.9 14.5 115 66-186 17-146 (218)
28 PHA02239 putative protein phos 99.9 1.1E-22 2.5E-27 185.2 15.1 171 67-279 2-219 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.5E-22 5.4E-27 179.6 15.9 169 66-265 1-184 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 5.4E-22 1.2E-26 184.0 16.2 74 66-139 2-82 (304)
31 PRK09968 serine/threonine-spec 99.9 2.9E-21 6.3E-26 174.3 12.5 115 66-186 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 1.3E-12 2.9E-17 108.0 12.6 158 67-260 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 1.7E-10 3.7E-15 97.8 15.6 83 67-186 1-86 (155)
34 PF12850 Metallophos_2: Calcin 99.2 4.8E-10 1E-14 94.3 12.5 151 67-295 2-152 (156)
35 TIGR00040 yfcE phosphoesterase 99.1 1.4E-09 3.1E-14 92.8 14.6 62 67-137 2-64 (158)
36 PRK09453 phosphodiesterase; Pr 99.1 2.9E-10 6.3E-15 99.5 9.0 68 67-138 2-77 (182)
37 cd07379 MPP_239FB Homo sapiens 99.0 1.8E-09 3.9E-14 89.8 10.7 118 67-265 1-120 (135)
38 COG0639 ApaH Diadenosine tetra 99.0 2.8E-10 6E-15 93.9 5.2 143 140-283 4-155 (155)
39 cd07397 MPP_DevT Myxococcus xa 98.9 1.1E-08 2.3E-13 93.4 11.0 156 67-261 2-208 (238)
40 cd00838 MPP_superfamily metall 98.9 3E-08 6.4E-13 79.5 11.6 117 69-265 1-119 (131)
41 cd07394 MPP_Vps29 Homo sapiens 98.8 4.6E-07 1E-11 79.3 16.9 110 67-262 1-119 (178)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.8 9.6E-08 2.1E-12 82.7 12.1 65 68-138 1-66 (188)
43 cd07388 MPP_Tt1561 Thermus the 98.7 5.9E-08 1.3E-12 88.0 7.7 71 66-137 5-75 (224)
44 PRK05340 UDP-2,3-diacylglucosa 98.6 6.1E-07 1.3E-11 82.0 13.7 204 67-298 2-232 (241)
45 cd07403 MPP_TTHA0053 Thermus t 98.6 6E-07 1.3E-11 74.4 10.8 107 69-265 1-107 (129)
46 cd07404 MPP_MS158 Microscilla 98.6 4.9E-07 1.1E-11 77.6 10.1 67 68-137 1-68 (166)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 6.4E-07 1.4E-11 81.4 11.0 203 68-297 1-229 (231)
48 cd07400 MPP_YydB Bacillus subt 98.4 3.9E-06 8.5E-11 70.0 12.2 117 68-265 1-129 (144)
49 cd07399 MPP_YvnB Bacillus subt 98.3 3.9E-05 8.4E-10 69.0 16.3 193 67-307 2-213 (214)
50 COG0622 Predicted phosphoester 98.2 6.3E-05 1.4E-09 65.6 15.4 157 67-307 3-165 (172)
51 PRK11340 phosphodiesterase Yae 98.2 4.2E-06 9.1E-11 78.0 6.9 69 67-137 51-125 (271)
52 cd07385 MPP_YkuE_C Bacillus su 98.1 3.8E-06 8.1E-11 75.1 6.1 70 67-138 3-77 (223)
53 cd07383 MPP_Dcr2 Saccharomyces 98.1 0.00012 2.5E-09 64.8 15.2 69 67-135 4-87 (199)
54 PRK11148 cyclic 3',5'-adenosin 98.1 0.0002 4.3E-09 66.7 16.4 69 67-137 16-98 (275)
55 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00032 6.9E-09 64.6 16.5 71 67-137 6-99 (262)
56 TIGR03729 acc_ester putative p 98.0 1.4E-05 3.1E-10 72.8 6.7 68 67-137 1-74 (239)
57 PRK04036 DNA polymerase II sma 97.9 7.5E-05 1.6E-09 75.6 10.6 112 66-185 244-388 (504)
58 cd07396 MPP_Nbla03831 Homo sap 97.9 4.2E-05 9E-10 71.0 7.4 73 67-139 2-88 (267)
59 PF06874 FBPase_2: Firmicute f 97.8 0.00036 7.9E-09 70.9 12.8 71 237-309 507-587 (640)
60 TIGR00619 sbcd exonuclease Sbc 97.7 7.1E-05 1.5E-09 69.1 7.0 71 67-137 2-88 (253)
61 cd07402 MPP_GpdQ Enterobacter 97.7 0.00012 2.7E-09 66.0 7.7 69 67-137 1-83 (240)
62 PHA02546 47 endonuclease subun 97.6 0.00011 2.4E-09 70.7 6.8 71 67-137 2-89 (340)
63 COG2908 Uncharacterized protei 97.6 0.00042 9.2E-09 62.8 9.8 199 69-300 1-230 (237)
64 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00018 3.8E-09 66.9 7.0 70 68-137 1-86 (262)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.5 0.00016 3.5E-09 64.2 6.2 73 67-139 1-91 (223)
66 COG2129 Predicted phosphoester 97.5 0.0084 1.8E-07 54.1 16.5 203 66-297 4-217 (226)
67 TIGR00024 SbcD_rel_arch putati 97.5 0.00033 7.2E-09 63.6 7.4 69 66-138 15-103 (225)
68 KOG0376 Serine-threonine phosp 97.5 1.2E-05 2.6E-10 78.9 -2.4 238 38-283 14-299 (476)
69 cd07390 MPP_AQ1575 Aquifex aeo 97.4 0.00028 6E-09 60.9 6.1 67 68-139 1-84 (168)
70 cd08165 MPP_MPPE1 human MPPE1 97.4 0.00025 5.4E-09 60.7 5.1 47 92-138 38-90 (156)
71 PRK10966 exonuclease subunit S 97.4 0.0004 8.7E-09 68.5 7.0 70 67-137 2-87 (407)
72 cd07391 MPP_PF1019 Pyrococcus 97.3 0.00045 9.7E-09 59.8 5.9 58 81-138 30-89 (172)
73 PF08321 PPP5: PPP5 TPR repeat 97.3 0.00064 1.4E-08 53.5 6.2 55 2-64 40-95 (95)
74 TIGR00583 mre11 DNA repair pro 97.2 0.00094 2E-08 65.8 7.6 72 67-138 5-124 (405)
75 cd07398 MPP_YbbF-LpxH Escheric 97.2 0.00063 1.4E-08 60.4 5.6 28 237-264 177-204 (217)
76 cd07393 MPP_DR1119 Deinococcus 97.2 0.00087 1.9E-08 60.9 6.6 45 236-282 180-227 (232)
77 cd07401 MPP_TMEM62_N Homo sapi 97.2 0.00097 2.1E-08 61.6 6.8 71 68-138 2-90 (256)
78 COG1409 Icc Predicted phosphoh 97.2 0.0016 3.4E-08 60.0 8.2 73 67-141 2-82 (301)
79 cd00839 MPP_PAPs purple acid p 97.0 0.002 4.3E-08 60.1 6.9 70 66-139 5-83 (294)
80 COG1408 Predicted phosphohydro 96.9 0.0022 4.7E-08 60.3 6.4 72 66-139 45-120 (284)
81 cd07386 MPP_DNA_pol_II_small_a 96.8 0.0043 9.2E-08 56.7 7.4 68 69-138 2-95 (243)
82 cd07380 MPP_CWF19_N Schizosacc 96.6 0.0057 1.2E-07 52.1 6.1 119 69-260 1-121 (150)
83 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0053 1.1E-07 53.3 5.9 48 91-138 44-101 (171)
84 cd08163 MPP_Cdc1 Saccharomyces 96.5 0.062 1.3E-06 49.8 13.2 23 237-259 204-226 (257)
85 COG4186 Predicted phosphoester 96.4 0.014 3.1E-07 49.8 7.3 70 67-140 5-89 (186)
86 cd00845 MPP_UshA_N_like Escher 96.3 0.0066 1.4E-07 55.3 5.5 66 67-137 2-82 (252)
87 cd08166 MPP_Cdc1_like_1 unchar 96.3 0.0077 1.7E-07 53.5 5.6 46 92-137 42-93 (195)
88 COG0420 SbcD DNA repair exonuc 95.8 0.027 5.8E-07 55.1 7.1 73 67-139 2-90 (390)
89 PLN02533 probable purple acid 95.7 0.014 3.1E-07 57.9 5.0 71 65-138 139-212 (427)
90 cd08164 MPP_Ted1 Saccharomyces 95.7 0.023 4.9E-07 50.5 5.7 66 72-137 23-111 (193)
91 PF14582 Metallophos_3: Metall 95.4 0.018 3.9E-07 52.1 4.0 74 65-138 5-103 (255)
92 cd07410 MPP_CpdB_N Escherichia 95.3 0.023 5E-07 52.8 4.8 65 67-136 2-94 (277)
93 COG1407 Predicted ICC-like pho 94.8 0.1 2.2E-06 47.6 7.0 101 64-187 18-140 (235)
94 COG1311 HYS2 Archaeal DNA poly 94.7 0.27 5.8E-06 49.1 10.3 206 68-297 228-461 (481)
95 cd07378 MPP_ACP5 Homo sapiens 94.7 0.074 1.6E-06 49.1 6.1 70 67-137 2-83 (277)
96 cd07408 MPP_SA0022_N Staphyloc 94.2 0.084 1.8E-06 48.6 5.3 65 67-136 2-81 (257)
97 cd07412 MPP_YhcR_N Bacillus su 93.6 0.09 2E-06 49.4 4.5 66 67-137 2-88 (288)
98 KOG3325 Membrane coat complex 93.3 3.1 6.6E-05 35.5 12.5 115 68-265 3-123 (183)
99 cd07387 MPP_PolD2_C PolD2 (DNA 92.9 2.7 5.9E-05 39.0 12.9 48 251-303 205-255 (257)
100 cd07411 MPP_SoxB_N Thermus the 92.0 0.29 6.4E-06 45.2 5.5 64 68-137 3-95 (264)
101 KOG3662 Cell division control 91.8 0.33 7.1E-06 47.8 5.6 56 81-136 81-143 (410)
102 PRK09419 bifunctional 2',3'-cy 90.4 0.36 7.7E-06 54.0 5.1 65 67-136 662-735 (1163)
103 cd00842 MPP_ASMase acid sphing 90.4 0.53 1.1E-05 44.0 5.5 73 68-140 40-125 (296)
104 KOG2863 RNA lariat debranching 90.3 0.72 1.6E-05 44.5 6.2 72 67-138 2-89 (456)
105 cd07409 MPP_CD73_N CD73 ecto-5 89.4 0.76 1.7E-05 42.9 5.8 66 67-137 2-94 (281)
106 cd07406 MPP_CG11883_N Drosophi 88.4 0.91 2E-05 41.8 5.4 56 76-136 21-82 (257)
107 KOG0918 Selenium-binding prote 88.3 0.0095 2.1E-07 57.7 -7.9 193 94-297 49-250 (476)
108 PF04042 DNA_pol_E_B: DNA poly 87.0 1.2 2.6E-05 39.3 5.1 72 68-139 1-93 (209)
109 KOG1432 Predicted DNA repair e 86.7 2.8 6.1E-05 40.3 7.6 48 91-139 99-149 (379)
110 TIGR00282 metallophosphoestera 85.4 1.7 3.6E-05 40.6 5.4 66 67-137 2-71 (266)
111 COG0737 UshA 5'-nucleotidase/2 85.0 1.2 2.5E-05 45.3 4.6 68 65-137 26-115 (517)
112 KOG2476 Uncharacterized conser 84.9 2.3 4.9E-05 42.4 6.2 70 64-134 4-75 (528)
113 cd07407 MPP_YHR202W_N Saccharo 84.4 1.4 3E-05 41.4 4.4 66 67-137 7-97 (282)
114 KOG3339 Predicted glycosyltran 84.1 11 0.00024 33.3 9.4 85 94-183 40-140 (211)
115 cd07405 MPP_UshA_N Escherichia 83.5 1.4 2.9E-05 41.4 4.0 65 68-137 3-87 (285)
116 cd08162 MPP_PhoA_N Synechococc 82.3 2.3 5E-05 40.5 5.1 64 68-136 3-90 (313)
117 PRK09420 cpdB bifunctional 2', 81.1 2.2 4.7E-05 44.9 4.8 69 64-137 24-122 (649)
118 cd07382 MPP_DR1281 Deinococcus 81.0 3.7 8.1E-05 38.0 5.8 66 67-137 1-70 (255)
119 TIGR01390 CycNucDiestase 2',3' 80.3 2.3 5E-05 44.5 4.6 66 67-137 4-99 (626)
120 PRK09419 bifunctional 2',3'-cy 79.4 2.4 5.2E-05 47.5 4.7 66 66-136 42-138 (1163)
121 COG3855 Fbp Uncharacterized pr 78.4 1.6 3.5E-05 43.4 2.7 41 94-139 192-232 (648)
122 COG1768 Predicted phosphohydro 74.3 6.5 0.00014 34.7 5.0 74 91-175 42-117 (230)
123 PRK11907 bifunctional 2',3'-cy 73.0 5.3 0.00012 43.0 5.0 67 66-137 116-213 (814)
124 PTZ00235 DNA polymerase epsilo 73.0 13 0.00028 35.1 7.0 73 66-138 28-123 (291)
125 PTZ00422 glideosome-associated 68.7 8.8 0.00019 37.8 5.1 71 67-137 28-109 (394)
126 KOG3947 Phosphoesterases [Gene 68.0 7.5 0.00016 36.4 4.2 94 38-139 25-128 (305)
127 PRK09558 ushA bifunctional UDP 67.7 7.6 0.00016 39.9 4.7 67 66-137 35-121 (551)
128 TIGR01530 nadN NAD pyrophospha 66.5 9.3 0.0002 39.3 5.1 65 68-137 3-94 (550)
129 PRK09418 bifunctional 2',3'-cy 61.1 12 0.00026 40.3 4.7 67 65-136 39-141 (780)
130 KOG2310 DNA repair exonuclease 55.6 36 0.00078 35.0 6.7 52 66-117 14-77 (646)
131 PF02875 Mur_ligase_C: Mur lig 53.7 48 0.001 24.9 5.9 73 62-134 8-82 (91)
132 PF15007 CEP44: Centrosomal sp 50.5 10 0.00022 31.6 1.7 86 73-172 1-88 (131)
133 PF14164 YqzH: YqzH-like prote 48.3 74 0.0016 23.1 5.6 47 13-60 1-47 (64)
134 KOG1378 Purple acid phosphatas 46.9 36 0.00078 34.1 5.2 72 65-140 147-224 (452)
135 PF06874 FBPase_2: Firmicute f 41.6 24 0.00053 36.7 3.2 40 95-139 187-226 (640)
136 PF12641 Flavodoxin_3: Flavodo 40.4 1.5E+02 0.0032 25.4 7.4 109 68-197 1-122 (160)
137 PRK10773 murF UDP-N-acetylmura 32.7 1.6E+02 0.0036 29.2 7.5 67 65-132 324-392 (453)
138 COG0634 Hpt Hypoxanthine-guani 29.5 3.9E+02 0.0085 23.4 9.7 78 36-117 9-117 (178)
139 TIGR00282 metallophosphoestera 28.7 43 0.00093 31.2 2.4 36 95-132 2-38 (266)
140 PF09637 Med18: Med18 protein; 28.2 1.1E+02 0.0023 28.2 4.9 38 237-277 139-176 (250)
141 PF09949 DUF2183: Uncharacteri 27.7 1.7E+02 0.0038 22.9 5.4 44 78-130 52-95 (100)
142 COG3855 Fbp Uncharacterized pr 27.1 96 0.0021 31.4 4.5 56 238-294 515-580 (648)
143 cd07382 MPP_DR1281 Deinococcus 25.3 64 0.0014 29.8 2.8 37 95-132 1-37 (255)
144 TIGR03729 acc_ester putative p 24.8 1E+02 0.0022 27.6 4.1 29 235-263 195-223 (239)
145 PLN02965 Probable pheophorbida 23.9 1.5E+02 0.0032 26.4 5.0 21 239-259 59-81 (255)
146 PF13258 DUF4049: Domain of un 23.6 65 0.0014 29.7 2.4 58 124-188 127-187 (318)
147 COG4320 Uncharacterized protei 23.5 49 0.0011 31.8 1.7 61 53-121 44-108 (410)
148 cd06244 Peptidase_M14-like_1_7 23.2 6.2E+02 0.013 23.6 10.0 19 128-146 125-143 (268)
149 smart00854 PGA_cap Bacterial c 23.1 1.6E+02 0.0034 26.5 5.0 40 241-282 197-236 (239)
150 TIGR01143 murF UDP-N-acetylmur 20.2 3.6E+02 0.0078 26.3 7.2 66 65-130 295-362 (417)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-81 Score=551.66 Aligned_cols=287 Identities=48% Similarity=0.965 Sum_probs=276.7
Q ss_pred hHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeE
Q 020919 17 ALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANY 96 (320)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~ 96 (320)
+++..|+++.+.+ .+.++++..||.++.++|.+||++..++.|++|+|||||++.||..+|+..|-++.++|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 4678889988876 68999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh-HHHHHHHHHHHccCCcEEEEc
Q 020919 97 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALID 175 (320)
Q Consensus 97 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP~~~~i~ 175 (320)
+|||||||||.+|+|++.+|+.||++||+++++||||||++.++..|||++||.+||+ ..+|+...+.|+.||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEE
Q 020919 176 EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCR 255 (320)
Q Consensus 176 ~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 255 (320)
+++||||||+||.+.++|+|+.+.|..++|+.+.++|+|||||.+. .+|+-++||+|+.||++++++|++.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999865 799999999999999999999999999999999
Q ss_pred eeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCcccc
Q 020919 256 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKV 312 (320)
Q Consensus 256 gH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~ 312 (320)
+||-+.+||++.++++++|||||||||+..+|.+|+|.++++..-.|.+|+.++...
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~ 289 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQES 289 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhh
Confidence 999999999999999999999999999999999999999999999999998776433
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=6.1e-77 Score=560.26 Aligned_cols=301 Identities=77% Similarity=1.374 Sum_probs=287.0
Q ss_pred ChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC
Q 020919 14 DPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK 93 (320)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~ 93 (320)
....++++|+++++.+...++....|+++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~ 86 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPE 86 (320)
T ss_pred cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCc
Confidence 34458999999999775555666789999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEE
Q 020919 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAAL 173 (320)
Q Consensus 94 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~ 173 (320)
++|||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|+.||++|+
T Consensus 87 ~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAi 166 (320)
T PTZ00480 87 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAAL 166 (320)
T ss_pred ceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceE
Q 020919 174 IDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLV 253 (320)
Q Consensus 174 i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~i 253 (320)
|++++|||||||+|.+.++++|++++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|
T Consensus 167 I~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~I 246 (320)
T PTZ00480 167 IDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLI 246 (320)
T ss_pred ecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred EEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCcccccc
Q 020919 254 CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKVKF 314 (320)
Q Consensus 254 IrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~ 314 (320)
|||||++++||+++++++|+|||||||||+..+|+||++.+++++.+.|++|+|.+.....
T Consensus 247 iR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~~ 307 (320)
T PTZ00480 247 CRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQGA 307 (320)
T ss_pred EEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999988766544
No 3
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.1e-75 Score=548.52 Aligned_cols=291 Identities=81% Similarity=1.451 Sum_probs=280.5
Q ss_pred HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEE
Q 020919 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (320)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~v 97 (320)
++++|+++++.+....+....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 57889999987765567777899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCc
Q 020919 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEK 177 (320)
Q Consensus 98 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~ 177 (320)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEee
Q 020919 178 ILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAH 257 (320)
Q Consensus 178 ~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH 257 (320)
++|||||++|.+.++++|++++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred eeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccC
Q 020919 258 QVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPA 308 (320)
Q Consensus 258 ~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 308 (320)
|++++||+++++++|+||||||||||..+|+||+|.+++++.+.|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 4
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.3e-76 Score=556.26 Aligned_cols=295 Identities=71% Similarity=1.258 Sum_probs=281.9
Q ss_pred ChhhHHHHHHHHHhcccCCCC--ccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCC-C
Q 020919 14 DPNALDDIIHRLTEVRFARPG--KQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGG-Y 90 (320)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~-~ 90 (320)
....+.++|.+++........ .+..++++++.+||..+.++|..+|+++++++||.|+|||||++.||.++|+..| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 455678888888877643222 2456999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh-HHHHHHHHHHHccCC
Q 020919 91 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLP 169 (320)
Q Consensus 91 ~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 169 (320)
|+..+|||||||||||++|+|++.+|+++|++||+++++||||||.+.++..|||++||..+|+ ..+|..+++.|+.||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred cEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcC
Q 020919 170 VAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHD 249 (320)
Q Consensus 170 ~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~ 249 (320)
++|+|+++++|+|||++|.+.++++|+.|.||.+.++.+++.|++||||.....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccC
Q 020919 250 LDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPA 308 (320)
Q Consensus 250 ~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 308 (320)
+++||||||++++||+++.+++++||||||+|||.++|.||+|.+++++.|+|++++|.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999994
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.7e-75 Score=545.40 Aligned_cols=291 Identities=59% Similarity=1.115 Sum_probs=278.3
Q ss_pred hHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeE
Q 020919 17 ALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANY 96 (320)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~ 96 (320)
-++++|+++++......+....++.+++.+||++++++|++||+++++++|++||||||||+.+|.++|+..++++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 46788999998765555666689999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcC
Q 020919 97 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDE 176 (320)
Q Consensus 97 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~ 176 (320)
||||||||||++|+|++.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|+.+.+||+.||+++++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEe
Q 020919 177 KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRA 256 (320)
Q Consensus 177 ~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 256 (320)
+++|||||++|.+.+++++++++||.+.++.+++.|++||||.....+|.+++||.|+.||++++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999998778999999999999999999999999999999999
Q ss_pred eeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEcc
Q 020919 257 HQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKP 307 (320)
Q Consensus 257 H~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 307 (320)
||++++||+++++++|+||||||||||..+|+||+|.+++++.++|.+++.
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999988763
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.1e-74 Score=545.54 Aligned_cols=284 Identities=35% Similarity=0.633 Sum_probs=260.9
Q ss_pred CChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhC
Q 020919 13 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYG 88 (320)
Q Consensus 13 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~ViGDIHG~~~~L~~il~~~ 88 (320)
++-..++++|+++.+.. .|+++++.+||++|+++|++||++++++. |++|||||||++.+|.++|+..
T Consensus 2 ~~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~ 73 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKN 73 (321)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHc
Confidence 45677999999999865 68999999999999999999999999976 8999999999999999999999
Q ss_pred CCCC-CCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh---HHHHHHHHHH
Q 020919 89 GYPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN---VRLWKAFTDC 164 (320)
Q Consensus 89 ~~~~-~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~ 164 (320)
|+++ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ .++|+.+.++
T Consensus 74 g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~ 153 (321)
T cd07420 74 GLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDV 153 (321)
T ss_pred CCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHH
Confidence 9885 46799999999999999999999999999999999999999999999999999999999996 7899999999
Q ss_pred HccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCC-----CCC----------------------chhhhHhhhcC
Q 020919 165 FNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTA-----VPD----------------------TGLLCDLLWSD 217 (320)
Q Consensus 165 f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~-----~~~----------------------~~~~~dllWsd 217 (320)
|+.||++|++++++|||||||+| ..++++|++|+|+.. .|. .+++.|+||||
T Consensus 154 F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSD 232 (321)
T cd07420 154 FSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSD 232 (321)
T ss_pred HHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecC
Confidence 99999999999999999999997 568999999887421 011 14678999999
Q ss_pred CCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 020919 218 PGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEE 297 (320)
Q Consensus 218 P~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~ 297 (320)
|......|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.++++
T Consensus 233 P~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~ 312 (321)
T cd07420 233 PKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPD 312 (321)
T ss_pred CccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCC
Confidence 98665557778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEE
Q 020919 298 LVCSFQIL 305 (320)
Q Consensus 298 ~~~~~~~~ 305 (320)
+.++|++|
T Consensus 313 ~~~~f~~~ 320 (321)
T cd07420 313 LTPHFVQY 320 (321)
T ss_pred CceeEEEe
Confidence 99888776
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.4e-74 Score=538.99 Aligned_cols=283 Identities=51% Similarity=0.996 Sum_probs=272.0
Q ss_pred HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEE
Q 020919 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (320)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~v 97 (320)
++++|+++++.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 678889988765 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh-HHHHHHHHHHHccCCcEEEEcC
Q 020919 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDE 176 (320)
Q Consensus 98 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP~~~~i~~ 176 (320)
|||||||||++|+|++.++++||+.+|.++++||||||...++..|||.+|+..+|+ ..+|..+.++|+.||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 999999999999999999999999999999999999999999999999999999997 4899999999999999999999
Q ss_pred cEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEe
Q 020919 177 KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRA 256 (320)
Q Consensus 177 ~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 256 (320)
+++||||||+|.+.++++|++++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred eeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCc
Q 020919 257 HQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAE 309 (320)
Q Consensus 257 H~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 309 (320)
||++++||++.++++|+|||||||||+..+|+||+|.+++++.+.|.+|+|.+
T Consensus 233 He~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 233 HQLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999864
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=6e-74 Score=538.02 Aligned_cols=287 Identities=45% Similarity=0.920 Sum_probs=272.1
Q ss_pred HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEE
Q 020919 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (320)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~v 97 (320)
++++|+++.+.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++|
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~l 74 (303)
T PTZ00239 3 IDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYI 74 (303)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 678889988765 689999999999999999999999999999999999999999999999999998999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhH-HHHHHHHHHHccCCcEEEEcC
Q 020919 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV-RLWKAFTDCFNCLPVAALIDE 176 (320)
Q Consensus 98 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LP~~~~i~~ 176 (320)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.++|++||++|++++
T Consensus 75 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~ 154 (303)
T PTZ00239 75 FIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEG 154 (303)
T ss_pred EeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcC
Confidence 9999999999999999999999999999999999999999999999999999999964 799999999999999999999
Q ss_pred cEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEe
Q 020919 177 KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRA 256 (320)
Q Consensus 177 ~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrg 256 (320)
+++|||||++|.+.++++|+.+.||.+.|..+++.|+|||||.. ..+|.+|+||.|+.||++++++||++||+++||||
T Consensus 155 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 233 (303)
T PTZ00239 155 QILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRA 233 (303)
T ss_pred eEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Confidence 99999999999999999999999999999999999999999984 47899999999999999999999999999999999
Q ss_pred eeeeccCeEEec-CCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCccccc
Q 020919 257 HQVVEDGYEFFA-DRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKVK 313 (320)
Q Consensus 257 H~~~~~G~~~~~-~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 313 (320)
||++++||++.+ +++|+|||||||||+..+|+||+|.+++++.+.|.+|+|.+++.+
T Consensus 234 He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~ 291 (303)
T PTZ00239 234 HQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAK 291 (303)
T ss_pred ChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccc
Confidence 999999999865 456999999999999999999999999999999999999876543
No 9
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2e-73 Score=537.61 Aligned_cols=297 Identities=39% Similarity=0.779 Sum_probs=280.4
Q ss_pred cccCccccc-CChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----eEEEecCCCCH
Q 020919 4 TQGQQQGTI-MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAP----MKICGDVHGQY 78 (320)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~----i~ViGDIHG~~ 78 (320)
|||++.-.. ++...++++++++...+ .|+++++.+||++|+++|++||++++++.| ++||||||||+
T Consensus 1 ~~~~~~~~~~i~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~ 72 (316)
T cd07417 1 YDGPRLEDEKVTLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQF 72 (316)
T ss_pred CCCcccCCCCCCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCH
Confidence 678888777 89999999999999865 689999999999999999999999999866 99999999999
Q ss_pred HHHHHHHHhCCCCCC-CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHH
Q 020919 79 SDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRL 157 (320)
Q Consensus 79 ~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~ 157 (320)
.+|.++|+..++++. +++||||||||||++|+||+.++++||+.+|.++++||||||.+.++..|||..|+..+|+..+
T Consensus 73 ~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l 152 (316)
T cd07417 73 YDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQM 152 (316)
T ss_pred HHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHH
Confidence 999999999998765 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEcCcEEEecCCC-CCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCccccc
Q 020919 158 WKAFTDCFNCLPVAALIDEKILCMHGGL-SPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTF 236 (320)
Q Consensus 158 ~~~~~~~f~~LP~~~~i~~~~l~vHgGi-~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~f 236 (320)
|+.+.++|++||++++++++++|||||+ +|...++++++++.|+.+.+..+++.|+|||||... .+|.+|+||.|+.|
T Consensus 153 ~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~f 231 (316)
T cd07417 153 FDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQF 231 (316)
T ss_pred HHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEe
Confidence 9999999999999999999999999999 567889999999999988888999999999999864 68999999999999
Q ss_pred ChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeC-CceEEEEEEccCc
Q 020919 237 GPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDE-ELVCSFQILKPAE 309 (320)
Q Consensus 237 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~ 309 (320)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||+|.+++ ++.+.|++|+|.+
T Consensus 232 g~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~ 305 (316)
T cd07417 232 GPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVP 305 (316)
T ss_pred CHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 8999999998754
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.4e-72 Score=521.52 Aligned_cols=270 Identities=59% Similarity=1.089 Sum_probs=262.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHH
Q 020919 39 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLA 118 (320)
Q Consensus 39 ~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 118 (320)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcC
Q 020919 119 YKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNL 198 (320)
Q Consensus 119 Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i 198 (320)
||+.+|.++++||||||...++..|||.+|+..+++.++|+.+.++|+.||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCC
Q 020919 199 PRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSA 278 (320)
Q Consensus 199 ~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa 278 (320)
+||.+.+..++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEEEEeCCceEEEEEEccC
Q 020919 279 PNYCGEFDNAGAMMSIDEELVCSFQILKPA 308 (320)
Q Consensus 279 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 308 (320)
||||+..+|+||++.++++..++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999999874
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=5.5e-72 Score=526.47 Aligned_cols=283 Identities=42% Similarity=0.828 Sum_probs=265.6
Q ss_pred HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEE
Q 020919 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (320)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~v 97 (320)
++-+++.+.+.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++||
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 3 IDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred HHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 456777777665 589999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCc
Q 020919 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEK 177 (320)
Q Consensus 98 fLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~ 177 (320)
|||||||||++|+|++.++++||+.+|.++++||||||.+.++..|||..|+..+|+.++|..+.++|++||++++++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCC------CcccC-CCCcccccChHHHHHHHHHcCC
Q 020919 178 ILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVK------GWGMN-DRGVSYTFGPDKVSEFLKRHDL 250 (320)
Q Consensus 178 ~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~~~ 250 (320)
++|||||++|.+.++++|++++||.+.+..+++.|+|||||..... +|.++ +||.|+.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999999989999999999999975432 47665 8999999999999999999999
Q ss_pred ceEEEeeeeeccCeEEecCC------eEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCc
Q 020919 251 DLVCRAHQVVEDGYEFFADR------QLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAE 309 (320)
Q Consensus 251 ~~iIrgH~~~~~G~~~~~~~------~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 309 (320)
++||||||++++||++++++ +|+|||||||||+..+|+||+|.++++. +.|++|+|.+
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~ 298 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 298 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCC
Confidence 99999999999999998876 8999999999999999999999999885 6889998765
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-72 Score=491.36 Aligned_cols=293 Identities=44% Similarity=0.897 Sum_probs=280.5
Q ss_pred ChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC
Q 020919 14 DPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK 93 (320)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~ 93 (320)
..-++++-|+.....+ .|+++++..||+-++++|..|.++..++.|+.|+|||||++.||.++|+..|--|+
T Consensus 2 ~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~ 73 (306)
T KOG0373|consen 2 RKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPD 73 (306)
T ss_pred CcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCC
Confidence 3456778888888887 79999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh-HHHHHHHHHHHccCCcEE
Q 020919 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAA 172 (320)
Q Consensus 94 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP~~~ 172 (320)
+.|||+|||||||.+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..+|+ ...|+...+.|+.|+++|
T Consensus 74 tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaA 153 (306)
T KOG0373|consen 74 TNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAA 153 (306)
T ss_pred cceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999996 689999999999999999
Q ss_pred EEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCce
Q 020919 173 LIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDL 252 (320)
Q Consensus 173 ~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 252 (320)
+|+++++|||||+||++.++|+|+-|.|..++|..+.++|++||||+. .+.|.-++||+|+.||.+++++|...|++++
T Consensus 154 iID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~L 232 (306)
T KOG0373|consen 154 IIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNL 232 (306)
T ss_pred HhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHH
Confidence 999999999999999999999999999999999999999999999985 7899999999999999999999999999999
Q ss_pred EEEeeeeeccCeEEecCCe-EEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCccccccc
Q 020919 253 VCRAHQVVEDGYEFFADRQ-LVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKVKFM 315 (320)
Q Consensus 253 iIrgH~~~~~G~~~~~~~~-vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~ 315 (320)
|.|+||.+.+||++.+++| ++|||||||||+..+|.+++|.++++++.++.+|...++..++.
T Consensus 233 icRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~ 296 (306)
T KOG0373|consen 233 ICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVI 296 (306)
T ss_pred HHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccC
Confidence 9999999999999988877 99999999999999999999999999999999999888777664
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.1e-70 Score=519.53 Aligned_cols=287 Identities=47% Similarity=0.895 Sum_probs=266.0
Q ss_pred HHHHHHhcccCCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCC-----
Q 020919 21 IIHRLTEVRFARP--GKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK----- 93 (320)
Q Consensus 21 ~i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~----- 93 (320)
+|+++++...|.. ..+..++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 3678888777755 557789999999999999999999999999999999999999999999999999998754
Q ss_pred ---CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhH------HHHHHHHHH
Q 020919 94 ---ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV------RLWKAFTDC 164 (320)
Q Consensus 94 ---~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 164 (320)
.++||||||||||++|+||+.++++|++.+|.++++||||||.+.++..+||..++..+++. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999888754 689999999
Q ss_pred HccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCC-CCCCchhhhHhhhcCCCCC--CCCcccCC---CCcc--ccc
Q 020919 165 FNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPT-AVPDTGLLCDLLWSDPGRD--VKGWGMND---RGVS--YTF 236 (320)
Q Consensus 165 f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~-~~~~~~~~~dllWsdP~~~--~~~~~~~~---rg~~--~~f 236 (320)
|+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|++||||... ..+|.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999899999999999999999999999997 4456788999999999864 35677776 9988 799
Q ss_pred ChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEcc
Q 020919 237 GPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKP 307 (320)
Q Consensus 237 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 307 (320)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.+++++.+++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=9.5e-68 Score=505.72 Aligned_cols=299 Identities=32% Similarity=0.622 Sum_probs=260.7
Q ss_pred ccccCChhhHHHHHHHHHhcccCC--CCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCHHHHH
Q 020919 9 QGTIMDPNALDDIIHRLTEVRFAR--PGKQVQLSESEIKQLCVASRDIFMRQPNLLELE----APMKICGDVHGQYSDLL 82 (320)
Q Consensus 9 ~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~ViGDIHG~~~~L~ 82 (320)
.|.+++.+.++++|+++....... ......++.+++.+||++|+++|++||++++++ +|++|||||||++.+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~ 82 (377)
T cd07418 3 DGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVL 82 (377)
T ss_pred CCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHH
Confidence 345578999999999997753211 112235889999999999999999999999998 79999999999999999
Q ss_pred HHHHhCCCCCC-CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhh---HHHH
Q 020919 83 RLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN---VRLW 158 (320)
Q Consensus 83 ~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~ 158 (320)
++|+..++++. +.+||||||||||++|+||+.++++||+.+|.++++||||||...++..|||.+++..+|+ ..+|
T Consensus 83 ~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~ 162 (377)
T cd07418 83 FLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVY 162 (377)
T ss_pred HHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHH
Confidence 99999999875 4599999999999999999999999999999999999999999999999999999999986 3799
Q ss_pred HHHHHHHccCCcEEEEcCcEEEecCCCC---------------------------CCCCChHhhhcCCCCC-CCCCch--
Q 020919 159 KAFTDCFNCLPVAALIDEKILCMHGGLS---------------------------PDLSHLDQIRNLPRPT-AVPDTG-- 208 (320)
Q Consensus 159 ~~~~~~f~~LP~~~~i~~~~l~vHgGi~---------------------------p~~~~l~~i~~i~r~~-~~~~~~-- 208 (320)
+.+.+||++||+++++++++|||||||+ |.+.++++|++++||. +.+..+
T Consensus 163 ~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~ 242 (377)
T cd07418 163 RKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSN 242 (377)
T ss_pred HHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcc
Confidence 9999999999999999989999999994 4567899999999974 454444
Q ss_pred -hhhHhhhcCCCCCCCCcccC-CCCcccccChHHHHHHHHHcCCceEEEeeee------------eccCeEEecC---Ce
Q 020919 209 -LLCDLLWSDPGRDVKGWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQV------------VEDGYEFFAD---RQ 271 (320)
Q Consensus 209 -~~~dllWsdP~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~------------~~~G~~~~~~---~~ 271 (320)
++.|+|||||... .+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++
T Consensus 243 ~i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~ 321 (377)
T cd07418 243 LIPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGK 321 (377)
T ss_pred ccceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCc
Confidence 4789999999864 566665 7999999999999999999999999999996 6799999876 89
Q ss_pred EEEEcCCCCCC------CCCCCcEEEEEEeCCc--eEEEEEEccC
Q 020919 272 LVTIFSAPNYC------GEFDNAGAMMSIDEEL--VCSFQILKPA 308 (320)
Q Consensus 272 vitifSa~~y~------~~~~n~ga~l~i~~~~--~~~~~~~~~~ 308 (320)
|+||||||||| +..+|+||++.++.+. ..+|.+|+.+
T Consensus 322 liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 322 LITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99999999999 5789999999997643 5666666533
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.4e-65 Score=469.41 Aligned_cols=270 Identities=41% Similarity=0.842 Sum_probs=253.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHH
Q 020919 38 QLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLL 117 (320)
Q Consensus 38 ~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~ 117 (320)
.++++....|+.++..+|++|++++++++||.|+|||||+|.||.++|+..|-|..++|+|||||||||..|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhc
Q 020919 118 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRN 197 (320)
Q Consensus 118 ~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~ 197 (320)
+||+.||..+++||||||++.+...+.|.+||..+|+.++|++..+.|+.||+||+.++.++|||||+||++.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhHhhhcCCCCCC------CCcccC-CCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCC
Q 020919 198 LPRPTAVPDTGLLCDLLWSDPGRDV------KGWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADR 270 (320)
Q Consensus 198 i~r~~~~~~~~~~~dllWsdP~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~ 270 (320)
+.|..+.|..+..+|+|||||.++. +.|..| -||++|.|...|..+||+.||+--|||+|+.++.||+.+...
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999997542 345544 699999999999999999999999999999999999987654
Q ss_pred ------eEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccC
Q 020919 271 ------QLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPA 308 (320)
Q Consensus 271 ------~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 308 (320)
.+|||||||||.+.++|++|+|+.+++. +.+++|..+
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNV-MNIRQFncS 342 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCS 342 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhccc-ceeeccCCC
Confidence 4899999999999999999999987764 455666543
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-64 Score=446.84 Aligned_cols=290 Identities=47% Similarity=0.927 Sum_probs=276.6
Q ss_pred hHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCCCCeE
Q 020919 17 ALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANY 96 (320)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~ 96 (320)
.++.-|+.+...+ ++++.++..+|..|+++|.+|.++..+..|++|+||+||||++|.++++..|..++..|
T Consensus 19 ~vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtny 90 (319)
T KOG0371|consen 19 DVDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNY 90 (319)
T ss_pred ccccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcce
Confidence 3566788888877 78999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHh-hHHHHHHHHHHHccCCcEEEEc
Q 020919 97 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALID 175 (320)
Q Consensus 97 vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~ 175 (320)
+|+|||||||++|+|++.+|.++|++||++|.+||||||.+.+...|||++||.++| ....|..|.+.|+.+|++|.|+
T Consensus 91 lfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~ 170 (319)
T KOG0371|consen 91 LFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 170 (319)
T ss_pred eeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999 5689999999999999999999
Q ss_pred CcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEE
Q 020919 176 EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCR 255 (320)
Q Consensus 176 ~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIr 255 (320)
++++|+|||++|++.+++.++.+.|..++|.++.++|+|||||.. .-+|..++||.|+.||.+..++|-.+||++++-|
T Consensus 171 ~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisR 249 (319)
T KOG0371|consen 171 SKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISR 249 (319)
T ss_pred cceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHH
Confidence 999999999999999999999999988999999999999999985 4899999999999999999999999999999999
Q ss_pred eeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCCceEEEEEEccCccccccc
Q 020919 256 AHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEELVCSFQILKPAEKKVKFM 315 (320)
Q Consensus 256 gH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~ 315 (320)
+||-+.+||.+.+...++|||||||||+..+|.+|++.++++....|.+|+|++.+..-.
T Consensus 250 ahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~ 309 (319)
T KOG0371|consen 250 AHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPD 309 (319)
T ss_pred HHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccc
Confidence 999999999999999999999999999999999999999999999999999988665543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-59 Score=441.51 Aligned_cols=304 Identities=31% Similarity=0.597 Sum_probs=270.8
Q ss_pred ccccCcccccCChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceEEEecCCCCH
Q 020919 3 TTQGQQQGTIMDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELE----APMKICGDVHGQY 78 (320)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~ViGDIHG~~ 78 (320)
+|.|+++..+++...++.+|+.+...+ .|++.++..++.+|+++|+.-|++-+++ ..+.|+||+||.+
T Consensus 106 ~y~Gp~ls~Pl~~~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGkl 177 (631)
T KOG0377|consen 106 SYNGPKLSLPLRKNHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKL 177 (631)
T ss_pred cCCCcccccCcCchHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccc
Confidence 688999999999999999999998866 6999999999999999999999998875 4699999999999
Q ss_pred HHHHHHHHhCCCCCCC-eEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHh---h
Q 020919 79 SDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF---N 154 (320)
Q Consensus 79 ~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~---~ 154 (320)
+||.-+|-+.|+|..+ .|||.||+||||.+|+|+|.+|+++-+.||..+++-|||||+..+|-.|||..|...+| +
T Consensus 178 DDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~ 257 (631)
T KOG0377|consen 178 DDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHG 257 (631)
T ss_pred cceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcc
Confidence 9999999999999765 59999999999999999999999999999999999999999999999999999999988 5
Q ss_pred HHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCC--------CCC-C-------------CCchhhhH
Q 020919 155 VRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPR--------PTA-V-------------PDTGLLCD 212 (320)
Q Consensus 155 ~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r--------~~~-~-------------~~~~~~~d 212 (320)
.++.+.+.++|++||++.+++.++|++|||+|. .+.++-+.+|+| |.. . .++..+.|
T Consensus 258 k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~D 336 (631)
T KOG0377|consen 258 KRILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFD 336 (631)
T ss_pred cHHHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHH
Confidence 789999999999999999999999999999984 455666665554 211 0 12456789
Q ss_pred hhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEE
Q 020919 213 LLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMM 292 (320)
Q Consensus 213 llWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l 292 (320)
++||||......|.+.-||.|++||++++.+||++++++++||+|+|.++||++.++++|+|||||+||....+|+||++
T Consensus 337 ImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYi 416 (631)
T KOG0377|consen 337 IMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYI 416 (631)
T ss_pred HHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEE
Confidence 99999997755666667999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCceEEEEEEccCccccccc
Q 020919 293 SIDEELVCSFQILKPAEKKVKFM 315 (320)
Q Consensus 293 ~i~~~~~~~~~~~~~~~~~~~~~ 315 (320)
++.+.+...|.++..+....+.+
T Consensus 417 kl~~~~~PhfvQY~a~k~t~~~t 439 (631)
T KOG0377|consen 417 KLGNQLTPHFVQYQAAKQTKRLT 439 (631)
T ss_pred EeCCCCCchHHHHHhhhhhhhhh
Confidence 99999988887666444444433
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.8e-49 Score=381.47 Aligned_cols=271 Identities=42% Similarity=0.831 Sum_probs=255.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCCCCCC-eEEEeccccCCCCCcHHH
Q 020919 38 QLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQSLET 112 (320)
Q Consensus 38 ~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~ViGDIHG~~~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~s~ev 112 (320)
.++...+-.|+..++.+++++|++++++. .+.|+||+||++.++.+++...|.|+.. .++|.||++|||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 57778889999999999999999999864 4899999999999999999999998764 699999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCC-CCCC
Q 020919 113 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSP-DLSH 191 (320)
Q Consensus 113 l~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p-~~~~ 191 (320)
...+.+.|+.+|++++++|||||+..++..|||..++..+|..+.+..+.+.|..||++..++++++.+|||+.. .-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999854 4467
Q ss_pred hHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCe
Q 020919 192 LDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQ 271 (320)
Q Consensus 192 l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~ 271 (320)
++++++|.|+...++.+..+++|||||... .+..++.||.|..||+++++.||+.|++++|||||+..+.||+..++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988899999999999999864 8999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCcEEEEEEe-CCceEEEEEEccCc
Q 020919 272 LVTIFSAPNYCGEFDNAGAMMSID-EELVCSFQILKPAE 309 (320)
Q Consensus 272 vitifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~ 309 (320)
|+|||||||||...+|.||++.++ +++...+..|++.|
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp 459 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVP 459 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCC
Confidence 999999999999999999999998 67888899998765
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=7e-37 Score=275.34 Aligned_cols=214 Identities=52% Similarity=0.868 Sum_probs=177.3
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHH
Q 020919 69 KICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 148 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 148 (320)
+|||||||++++|.++++..+..+.+.+||||||||||+.+.+++.++..++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999998877 8899999999999988766655433
Q ss_pred H---------HHHhhHHHHHHHHHHHccCCcEEEEcC-cEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCC
Q 020919 149 C---------KRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDP 218 (320)
Q Consensus 149 ~---------~~~~~~~~~~~~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP 218 (320)
. .......++..+.+|+..||+++.++. +++|||||++|.+...++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 223345678888999999999999987 99999999999887655544 2233445689999999
Q ss_pred CCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEE
Q 020919 219 GRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMS 293 (320)
Q Consensus 219 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~ 293 (320)
.........+.++. |+++++.|++.++.+.|||||+++..|+.+...++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75434343444444 999999999999999999999999999876778899999999999877677776653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=2.4e-27 Score=212.40 Aligned_cols=175 Identities=21% Similarity=0.321 Sum_probs=129.9
Q ss_pred EEEecCCCCHHHHHHHHHhCCC--------CCCCeEEEeccccCCCCCcHHHHHHHHHhhhh---CCCcEEEecCCcccc
Q 020919 69 KICGDVHGQYSDLLRLFEYGGY--------PPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 137 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il~~~~~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~---~p~~v~~lrGNHE~~ 137 (320)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+++.++++|+.. .+.+++.|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 457899999999999
Q ss_pred chhhhccchHH--HHHHh-----hHHHH---HHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCc
Q 020919 138 SINRIYGFYDE--CKRRF-----NVRLW---KAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDT 207 (320)
Q Consensus 138 ~~~~~~gf~~e--~~~~~-----~~~~~---~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~ 207 (320)
.++..+.+... ..... ...++ ..+.+|++.+|+...++ ++++||||++|.|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~w------------------ 141 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPLW------------------ 141 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHHH------------------
Confidence 88754433211 11000 01111 23589999999998876 7999999983321
Q ss_pred hhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCC
Q 020919 208 GLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSA 278 (320)
Q Consensus 208 ~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa 278 (320)
...|..+.. +.+ -+...++++++.++.+++|+|||+++.|....+++++|+|.++
T Consensus 142 ----~r~y~~~~~-------~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 142 ----YRGYSKETS-------DKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred ----hhHhhhhhh-------hcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 101111110 000 0125688999999999999999999988766889999999884
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=3e-26 Score=210.17 Aligned_cols=121 Identities=24% Similarity=0.440 Sum_probs=96.5
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC---------CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYP---------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
+++||||||||++.|.++|+++++. ..+++|||||||||||+|.|||.+++++. .+.++++||||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 5899999999999999999998873 45789999999999999999999998874 556899999999998
Q ss_pred chhhhccc-------hHHHHHHh-------hHHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCC
Q 020919 138 SINRIYGF-------YDECKRRF-------NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDL 189 (320)
Q Consensus 138 ~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~ 189 (320)
.++...+- ..+....+ ...+.+.+.+|++++|++..++ ++++|||||+.|..
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 77543220 11111122 1346778899999999998774 57999999998863
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=7.5e-25 Score=198.15 Aligned_cols=115 Identities=24% Similarity=0.426 Sum_probs=91.0
Q ss_pred EEEecCCCCHHHHHHHHHhCCCC--------CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchh
Q 020919 69 KICGDVHGQYSDLLRLFEYGGYP--------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 140 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il~~~~~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~ 140 (320)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++. .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 69999999999999999998775 46789999999999999999999999875 345899999999998774
Q ss_pred hhcc------ch-----------HHHHHHh--hHHHHHHHHHHHccCCcEEEEcCcEEEecCCCC
Q 020919 141 RIYG------FY-----------DECKRRF--NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS 186 (320)
Q Consensus 141 ~~~g------f~-----------~e~~~~~--~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~ 186 (320)
...+ +. .+..+.+ ..+..+.+.+||++||+....+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 3211 00 0111122 1345677899999999998764 8999999975
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=2.8e-24 Score=199.91 Aligned_cols=217 Identities=16% Similarity=0.300 Sum_probs=141.4
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 145 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf 145 (320)
+++||||||||+++|.++|+++++. ..+.++||||+|||||+|.||+.++.++ +.+++.|+||||.+.+...+|.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~ 77 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGI 77 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCC
Confidence 4799999999999999999999874 5678999999999999999999999876 3579999999999887766654
Q ss_pred hHH-----HHHHhhHHHHHHHHHHHccCCcEEEE-cCcEEEecCCCCCCCCChHhh---hcCCCCCCCCC-chhhhHhhh
Q 020919 146 YDE-----CKRRFNVRLWKAFTDCFNCLPVAALI-DEKILCMHGGLSPDLSHLDQI---RNLPRPTAVPD-TGLLCDLLW 215 (320)
Q Consensus 146 ~~e-----~~~~~~~~~~~~~~~~f~~LP~~~~i-~~~~l~vHgGi~p~~~~l~~i---~~i~r~~~~~~-~~~~~dllW 215 (320)
... ..........+.+.+|++++|+...+ +.++++||||++|.+...+.+ +++...+.-++ ...+..+.|
T Consensus 78 ~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 157 (275)
T PRK00166 78 KRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYG 157 (275)
T ss_pred ccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcC
Confidence 311 11111223345688999999999876 558999999999988532211 11111111122 234555555
Q ss_pred cCCCCCCCCcccCCCCc-ccccChHHHHH--HHHHc-----------------------------CCceEEEeeeeeccC
Q 020919 216 SDPGRDVKGWGMNDRGV-SYTFGPDKVSE--FLKRH-----------------------------DLDLVCRAHQVVEDG 263 (320)
Q Consensus 216 sdP~~~~~~~~~~~rg~-~~~fg~~~~~~--fl~~~-----------------------------~~~~iIrgH~~~~~G 263 (320)
+.|. .|.++-.|. ...|--.++.+ ||... .-..||-||.+...|
T Consensus 158 ~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 158 NEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 5553 233332221 11111111111 22222 234799999998778
Q ss_pred eEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 020919 264 YEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEE 297 (320)
Q Consensus 264 ~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~ 297 (320)
... ...++.+-|..-+. +.=..+.++..
T Consensus 234 ~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~ 261 (275)
T PRK00166 234 LTT--PPNIIALDTGCVWG----GKLTALRLEDK 261 (275)
T ss_pred ccC--CCCeEEeecccccC----CeEEEEEeCCC
Confidence 765 45688888876542 33445666644
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=3.6e-24 Score=195.04 Aligned_cols=120 Identities=28% Similarity=0.531 Sum_probs=96.2
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCC----------CCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPP----------KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
|+.||||||||+.+|.++|+++++.+ .+++|||||||||||+|.||+.+|.+++. +.++++||||||.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE~ 79 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHDN 79 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcHH
Confidence 78999999999999999999997753 46899999999999999999999998863 3579999999999
Q ss_pred cchhhhc--------cchHHHHHHh---hHHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCC
Q 020919 137 ASINRIY--------GFYDECKRRF---NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDL 189 (320)
Q Consensus 137 ~~~~~~~--------gf~~e~~~~~---~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~ 189 (320)
+.++... |+.. ....+ ..++.+.+.+||+.||+...++ ++++|||||+++.+
T Consensus 80 ~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 80 KLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 8775432 2221 11222 2456778899999999998775 47999999988753
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=1.8e-24 Score=199.24 Aligned_cols=119 Identities=28% Similarity=0.406 Sum_probs=98.2
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 68 MKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 68 i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
++||||||||+++|+++|+++++. +.+.++|+||||||||+|+||+.++.+++ .+++.|+||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999876 57889999999999999999999999875 5799999999999887666543
Q ss_pred HHHH-----HHhhHHHHHHHHHHHccCCcEEEEcC-cEEEecCCCCCCCC
Q 020919 147 DECK-----RRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLS 190 (320)
Q Consensus 147 ~e~~-----~~~~~~~~~~~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~~ 190 (320)
.... ........+.+.+|++++|+...+++ ++++||||++|.|.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 2111 11122234568899999999988865 79999999999985
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.90 E-value=7.7e-24 Score=195.86 Aligned_cols=120 Identities=23% Similarity=0.376 Sum_probs=99.3
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 145 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf 145 (320)
.++||||||||+++|+++|+++++. ..+.++|+||+|||||+|+||+.++.++. +++++|+||||.+.++..+|+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCC
Confidence 4799999999999999999999876 46789999999999999999999998874 568899999999988877765
Q ss_pred h-----HHHHHHhhHHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCCCC
Q 020919 146 Y-----DECKRRFNVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDLS 190 (320)
Q Consensus 146 ~-----~e~~~~~~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~~~ 190 (320)
. +.....+.....+.+.+|++++|+....+ .++++||||++|.|.
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 2 22222233445577899999999997654 369999999999985
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.90 E-value=3.2e-23 Score=186.92 Aligned_cols=115 Identities=23% Similarity=0.317 Sum_probs=89.1
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+||.++.+ .+++.|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999865 25789999999988754321
Q ss_pred chHH--------HHHHh---hHHHHHHHHHHHccCCcEEEEc---CcEEEecCCCC
Q 020919 145 FYDE--------CKRRF---NVRLWKAFTDCFNCLPVAALID---EKILCMHGGLS 186 (320)
Q Consensus 145 f~~e--------~~~~~---~~~~~~~~~~~f~~LP~~~~i~---~~~l~vHgGi~ 186 (320)
-... ..... ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1000 00011 1234556779999999997653 46999999974
No 28
>PHA02239 putative protein phosphatase
Probab=99.89 E-value=1.1e-22 Score=185.24 Aligned_cols=171 Identities=21% Similarity=0.292 Sum_probs=118.7
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC--CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.+++.|+||||.+.+....+
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHhC
Confidence 5799999999999999999987543 46789999999999999999999998874 34668999999999986532210
Q ss_pred ----------ch----HHHHHHhh-------------------------------HHHHHHHHHHHccCCcEEEEcCcEE
Q 020919 145 ----------FY----DECKRRFN-------------------------------VRLWKAFTDCFNCLPVAALIDEKIL 179 (320)
Q Consensus 145 ----------f~----~e~~~~~~-------------------------------~~~~~~~~~~f~~LP~~~~i~~~~l 179 (320)
+. .+....|+ ...+..+.+|+++||+....+ +++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEE
Confidence 00 01111121 113355677999999998865 899
Q ss_pred EecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeee
Q 020919 180 CMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQV 259 (320)
Q Consensus 180 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~ 259 (320)
|||||+.|... +++- ...+++|.+. . .+.. .=+.+|.||||
T Consensus 160 fVHAGi~p~~~-~~~q-------------~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp 200 (235)
T PHA02239 160 FSHSGGVSWKP-VEEQ-------------TIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTP 200 (235)
T ss_pred EEeCCCCCCCC-hhhC-------------CHhHeEEecc-c-----CCCC-------------------CCcEEEECCCC
Confidence 99999988743 3221 1368999874 1 1111 12358999999
Q ss_pred eccCeEEecCCeEEEEcCCC
Q 020919 260 VEDGYEFFADRQLVTIFSAP 279 (320)
Q Consensus 260 ~~~G~~~~~~~~vitifSa~ 279 (320)
+..+..... ++.|.|-+..
T Consensus 201 ~~~~~~~~~-~~~I~IDtGa 219 (235)
T PHA02239 201 TDSGEVEIN-GDMLMCDVGA 219 (235)
T ss_pred CCCCccccc-CCEEEeecCc
Confidence 976543332 3456776654
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.89 E-value=2.5e-22 Score=179.57 Aligned_cols=169 Identities=24% Similarity=0.322 Sum_probs=115.2
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
++++||||||||+.+|+++++..++. ..+.++|+|||||||+++.|++.++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998874 467899999999999999999998864 36899999999988765443
Q ss_pred c--hHHHHHHh---------hHHHHHHHHHHHccCCcEEEEc---CcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhh
Q 020919 145 F--YDECKRRF---------NVRLWKAFTDCFNCLPVAALID---EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLL 210 (320)
Q Consensus 145 f--~~e~~~~~---------~~~~~~~~~~~f~~LP~~~~i~---~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~ 210 (320)
. ..+..... ..++++.+.+||++||+...++ .++++||||+++... .+.+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 1 11111111 1235666889999999998874 369999999865431 111110 01112234
Q ss_pred hHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 211 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 211 ~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
.+++|++|...... +...-+.+.+|.||++.+..+.
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcceE
Confidence 57888876421000 0001145679999999875443
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.88 E-value=5.4e-22 Score=184.05 Aligned_cols=74 Identities=34% Similarity=0.490 Sum_probs=64.0
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC------CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCC-cEEEecCCccccc
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYP------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS 138 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~------~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~-~v~~lrGNHE~~~ 138 (320)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+.+|.+++..+|. ++++|+||||.+.
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36899999999999999999865421 2457999999999999999999999999888876 6899999999876
Q ss_pred h
Q 020919 139 I 139 (320)
Q Consensus 139 ~ 139 (320)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 5
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.86 E-value=2.9e-21 Score=174.26 Aligned_cols=115 Identities=23% Similarity=0.299 Sum_probs=86.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
++++||||||||+++|+++|+.+.+. ..+.++||||||||||+|.|++.++.+ .+++.||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998754 567899999999999999999998854 36889999999987754311
Q ss_pred chHHH--------HHHhh---HHHHHHHHHHHccCCcEEEEc---CcEEEecCCCC
Q 020919 145 FYDEC--------KRRFN---VRLWKAFTDCFNCLPVAALID---EKILCMHGGLS 186 (320)
Q Consensus 145 f~~e~--------~~~~~---~~~~~~~~~~f~~LP~~~~i~---~~~l~vHgGi~ 186 (320)
-.... ..... .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00000 00111 123344567999999998763 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.45 E-value=1.3e-12 Score=108.04 Aligned_cols=158 Identities=25% Similarity=0.290 Sum_probs=102.7
Q ss_pred ceEEEecCCCCHHHH----HHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHH--HHhhhhCCCcEEEecCCccccchh
Q 020919 67 PMKICGDVHGQYSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASIN 140 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll--~~Lk~~~p~~v~~lrGNHE~~~~~ 140 (320)
+|++|||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 34444444456678899999999999888776654 444556778899999999998754
Q ss_pred hhccchHHHH----------------------------------HHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCC
Q 020919 141 RIYGFYDECK----------------------------------RRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS 186 (320)
Q Consensus 141 ~~~gf~~e~~----------------------------------~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~ 186 (320)
..+....... .............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 3221111110 011111222223333333344444557999999987
Q ss_pred CCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeee
Q 020919 187 PDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 260 (320)
Q Consensus 187 p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 260 (320)
+........ .....+.+.+..++++.++++++.||+..
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 654322211 12345678899999999999999999854
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.28 E-value=1.7e-10 Score=97.81 Aligned_cols=83 Identities=24% Similarity=0.340 Sum_probs=63.6
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998654 678999999999998765 1 123469999999998532
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCcEEEE--c-CcEEEecCCCC
Q 020919 147 DECKRRFNVRLWKAFTDCFNCLPVAALI--D-EKILCMHGGLS 186 (320)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i--~-~~~l~vHgGi~ 186 (320)
+..+|....+ + .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 3556755444 2 37999998754
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.16 E-value=4.8e-10 Score=94.31 Aligned_cols=151 Identities=22% Similarity=0.310 Sum_probs=91.2
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
+++++||+|++..++.++++.+ ...+.++++||++|+ .+++..+..+ .++.++||||...........
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~ 69 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDEE 69 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECTC
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhcc
Confidence 6899999999999999999987 346778899999993 7777776544 599999999975533221100
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcc
Q 020919 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (320)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~ 226 (320)
. +....... .-..+++++||.+..
T Consensus 70 --~--------------~~~~~~~~-~~~~~i~~~H~~~~~--------------------------------------- 93 (156)
T PF12850_consen 70 --Y--------------LLDALRLT-IDGFKILLSHGHPYD--------------------------------------- 93 (156)
T ss_dssp --S--------------SHSEEEEE-ETTEEEEEESSTSSS---------------------------------------
T ss_pred --c--------------cccceeee-ecCCeEEEECCCCcc---------------------------------------
Confidence 0 11111111 113479999996543
Q ss_pred cCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEe
Q 020919 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSID 295 (320)
Q Consensus 227 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~ 295 (320)
...+.+.+.+.+...++++++.||.-.+.-.+ ..+..+++.-|..... .+...+++.++
T Consensus 94 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 94 -------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp -------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred -------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 01334556677789999999999998754333 3444555555443222 12255555554
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.14 E-value=1.4e-09 Score=92.83 Aligned_cols=62 Identities=16% Similarity=0.140 Sum_probs=48.2
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCC-CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++.|+||+||++.++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 5899999999998877776655554 567899999998 467777665442 3599999999983
No 36
>PRK09453 phosphodiesterase; Provisional
Probab=99.11 E-value=2.9e-10 Score=99.47 Aligned_cols=68 Identities=22% Similarity=0.331 Sum_probs=54.8
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCC--------cHHHHHHHHHhhhhCCCcEEEecCCccccc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
++.|+||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+ ...++.++||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 589999999999999999988755667889999999999873 45666666443 246999999999753
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.04 E-value=1.8e-09 Score=89.82 Aligned_cols=118 Identities=20% Similarity=0.199 Sum_probs=79.1
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcH--HHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
++.++||+||++. .....+.+.++++||+++++..+- +.+.++..++ . ..++.+.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999987 122345677889999999986432 2344443332 1 236789999996421
Q ss_pred chHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCC
Q 020919 145 FYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKG 224 (320)
Q Consensus 145 f~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~ 224 (320)
.-+.+++++||.+.+.. +. .+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~---~~-------------------~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL---DL-------------------VS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc---cc-------------------cc--c------
Confidence 12447999998532211 00 00 0
Q ss_pred cccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 225 WGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 225 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
....|.+.+.+++++.+.++++-||+-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123677888999999999999999999988876
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.03 E-value=2.8e-10 Score=93.92 Aligned_cols=143 Identities=41% Similarity=0.647 Sum_probs=115.8
Q ss_pred hhhccchHHHHHHhhHH-HHHH---HHHHHccCCcEEEEcC-cEEEecCCCCCCC-CChHhhhcCCCCC--CCCCchhhh
Q 020919 140 NRIYGFYDECKRRFNVR-LWKA---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-SHLDQIRNLPRPT--AVPDTGLLC 211 (320)
Q Consensus 140 ~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~-~~l~~i~~i~r~~--~~~~~~~~~ 211 (320)
...+++.+++...+... .|.. ..++|+.+|+.+.++. .++|.|++++|.+ ..+++++.+.|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 44566666665555543 5665 8999999999999888 8999999999976 5677777776655 566677777
Q ss_pred HhhhcCCCCC-CCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCC
Q 020919 212 DLLWSDPGRD-VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCG 283 (320)
Q Consensus 212 dllWsdP~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~ 283 (320)
+.+|++|... ...|.++++|.+..| .+....|+..+..+.+.++|+.+..++.....+..+|.||+++|+.
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~~ 155 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYCY 155 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecccccC
Confidence 7799998863 678989999988887 7888899988888889999999999998877768999999999873
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.91 E-value=1.1e-08 Score=93.44 Aligned_cols=156 Identities=20% Similarity=0.253 Sum_probs=95.0
Q ss_pred ceEEEecCCCCHHHHH-HHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhh---
Q 020919 67 PMKICGDVHGQYSDLL-RLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI--- 142 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~-~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~--- 142 (320)
+++++|||||++.... +.++.. ..+.++++||+++ .+.+++..+..+ +..++.++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 5899999999987642 334432 3478999999986 456776666554 3458999999998553200
Q ss_pred -----------------cc------------------------ch-HHHHHHhh-HHHHHHHHHHHccCCcEEEEcCcEE
Q 020919 143 -----------------YG------------------------FY-DECKRRFN-VRLWKAFTDCFNCLPVAALIDEKIL 179 (320)
Q Consensus 143 -----------------~g------------------------f~-~e~~~~~~-~~~~~~~~~~f~~LP~~~~i~~~~l 179 (320)
++ +. .++...|+ ....+++...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 00 01 13444452 3455667777777764333344799
Q ss_pred EecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcC----CceEEE
Q 020919 180 CMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHD----LDLVCR 255 (320)
Q Consensus 180 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~iIr 255 (320)
+.|++++-.. ++.+. |. ...|.+. +..+|...+.+-+++.. .++++-
T Consensus 152 iaH~~~~G~g---~~~~~--------------------~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAED--------------------PC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---ccccc--------------------cc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999976432 11111 11 1223221 22467777777666655 799999
Q ss_pred eeeeec
Q 020919 256 AHQVVE 261 (320)
Q Consensus 256 gH~~~~ 261 (320)
||--..
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 997644
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.88 E-value=3e-08 Score=79.48 Aligned_cols=117 Identities=26% Similarity=0.380 Sum_probs=84.6
Q ss_pred EEEecCCCCHHHHHHHH--HhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 69 KICGDVHGQYSDLLRLF--EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il--~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33334556778899999999988777655433333445678999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcc
Q 020919 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (320)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~ 226 (320)
++++|+.+.+.........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~~------------------------------ 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPDE------------------------------ 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcccc------------------------------
Confidence 8899998755432111000
Q ss_pred cCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 227 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
......+...+.+.+.+.+|.||+-....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0056778888999999999999999866554
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.79 E-value=4.6e-07 Score=79.30 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=74.3
Q ss_pred ceEEEecCC-CCHH-----HHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchh
Q 020919 67 PMKICGDVH-GQYS-----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 140 (320)
Q Consensus 67 ~i~ViGDIH-G~~~-----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~ 140 (320)
.|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 378999999 5533 35555544 34578999999987 77777765542 25999999999731
Q ss_pred hhccchHHHHHHhhHHHHHHHHHHHccCCcEEEE---cCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcC
Q 020919 141 RIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI---DEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSD 217 (320)
Q Consensus 141 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsd 217 (320)
.+|....+ +.+++++||-.-.. |
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~-- 92 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------W-- 92 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------C--
Confidence 45555444 23899999842100 0
Q ss_pred CCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeecc
Q 020919 218 PGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVED 262 (320)
Q Consensus 218 P~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~ 262 (320)
...+.+.++.+..+++.+|.||+-.+.
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~ 119 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFE 119 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcce
Confidence 013345566677889999999999763
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.77 E-value=9.6e-08 Score=82.72 Aligned_cols=65 Identities=22% Similarity=0.241 Sum_probs=46.3
Q ss_pred eEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCc-HHHHHHHHHhhhhCCCcEEEecCCccccc
Q 020919 68 MKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 68 i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-~evl~ll~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
|+++||+||++..+.. ......+.+.+|+.||++++|... .+.+..+.. .+..++.+.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998877 323334557888999999998753 333333322 3456999999999743
No 43
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.67 E-value=5.9e-08 Score=88.01 Aligned_cols=71 Identities=10% Similarity=0.145 Sum_probs=57.4
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
.++.++||+||++..++++++.+.....+.+|++||++++|+..-++..++..+.. .+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 46899999999999999999876545668899999999999777677666665532 234699999999975
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.64 E-value=6.1e-07 Score=82.01 Aligned_cols=204 Identities=16% Similarity=0.214 Sum_probs=102.7
Q ss_pred ceEEEecCCCC------HHHHHHHHHhCCCCCCCeEEEeccccCC--C-----CCcHHHHHHHHHhhhhCCCcEEEecCC
Q 020919 67 PMKICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGN 133 (320)
Q Consensus 67 ~i~ViGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~Lk~~~p~~v~~lrGN 133 (320)
++++++|+|.. ...+.+.|+.. ....+.++++||++|. | +...+++.++..|+. .+-.+++++||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GN 79 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGN 79 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 58999999954 23455555432 2345778899999985 2 334566777766642 33579999999
Q ss_pred ccccchhhhccchHHHHHHhhHHHHHHHHHHHccCC--cEEEEc-CcEEEecCCCCCCCC-ChHhhhcCCC-CC-----C
Q 020919 134 HECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLP--VAALID-EKILCMHGGLSPDLS-HLDQIRNLPR-PT-----A 203 (320)
Q Consensus 134 HE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP--~~~~i~-~~~l~vHgGi~p~~~-~l~~i~~i~r-~~-----~ 203 (320)
||..... ...+..+ ...+| ....++ .+++++||-..+.-. .....+++-| |. .
T Consensus 80 HD~~~~~-------~~~~~~g----------~~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 142 (241)
T PRK05340 80 RDFLLGK-------RFAKAAG----------MTLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFL 142 (241)
T ss_pred CchhhhH-------HHHHhCC----------CEEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHH
Confidence 9974311 0001111 12222 332333 469999998654221 1222222222 10 0
Q ss_pred CCCchhhhHhhh--cCCCCCCCCcccCCCCc--ccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCC
Q 020919 204 VPDTGLLCDLLW--SDPGRDVKGWGMNDRGV--SYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAP 279 (320)
Q Consensus 204 ~~~~~~~~dllW--sdP~~~~~~~~~~~rg~--~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~ 279 (320)
.........+-+ +.-+ -..+.+.. -....++++.+.+++.+++.+|.||+-.+.-.....++.-++-.+-+
T Consensus 143 ~~p~~~~~~ia~~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lg 217 (241)
T PRK05340 143 ALPLSIRLRIAAKMRAKS-----KAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLG 217 (241)
T ss_pred hCCHHHHHHHHHHHHHHH-----HHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeC
Confidence 000000001100 0000 00000011 12235677889999999999999999876433332332111222222
Q ss_pred CCCCCCCCcEEEEEEeCCc
Q 020919 280 NYCGEFDNAGAMMSIDEEL 298 (320)
Q Consensus 280 ~y~~~~~n~ga~l~i~~~~ 298 (320)
+. ...+.++.++.+.
T Consensus 218 dw----~~~~~~~~~~~~~ 232 (241)
T PRK05340 218 DW----HEQGSVLKVDADG 232 (241)
T ss_pred CC----CCCCeEEEEECCc
Confidence 22 2347788887753
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.58 E-value=6e-07 Score=74.42 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=74.4
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHH
Q 020919 69 KICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 148 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e 148 (320)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776664 45668899999973 34555555441 234899999999
Q ss_pred HHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcccC
Q 020919 149 CKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMN 228 (320)
Q Consensus 149 ~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~ 228 (320)
-+++++|+-+.+ ..... +
T Consensus 57 ---------------------------~~Ilv~H~pp~~-~~~~~------------------~---------------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAG-IGDGE------------------D---------------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCc-CcCcc------------------c----------------
Confidence 379999974211 10000 0
Q ss_pred CCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 229 DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 229 ~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
...-|.+++.+++++.+.+.++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011356778889999999999999999876655
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.56 E-value=4.9e-07 Score=77.55 Aligned_cols=67 Identities=24% Similarity=0.247 Sum_probs=47.6
Q ss_pred eEEEecCCCCHHHHHHHH-HhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 68 MKICGDVHGQYSDLLRLF-EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 68 i~ViGDIHG~~~~L~~il-~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
+.++||+|++...+...+ +.......+.++++||+++++..+.... ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233345567889999999987655543 222 223456799999999986
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.55 E-value=6.4e-07 Score=81.40 Aligned_cols=203 Identities=16% Similarity=0.187 Sum_probs=99.0
Q ss_pred eEEEecCCCCH------HHHHHHHHhCCCCCCCeEEEeccccCCC-----CC--cHHHHHHHHHhhhhCCCcEEEecCCc
Q 020919 68 MKICGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNH 134 (320)
Q Consensus 68 i~ViGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG-----~~--s~evl~ll~~Lk~~~p~~v~~lrGNH 134 (320)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|+. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 234455544321 457788999999952 11 1344555555542 345799999999
Q ss_pred cccchhhhccchHHHHHHhhHHHHHHHHHHHccCC--cEEEE-cCcEEEecCCCCCCC-CChHhhhcCCC-CC------C
Q 020919 135 ECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLP--VAALI-DEKILCMHGGLSPDL-SHLDQIRNLPR-PT------A 203 (320)
Q Consensus 135 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP--~~~~i-~~~~l~vHgGi~p~~-~~l~~i~~i~r-~~------~ 203 (320)
|...-. .+.+... +..+| ....+ +.+++++||-.-..- ....-.+++-| |. .
T Consensus 79 D~~~~~---------------~~~~~~g--i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~ 141 (231)
T TIGR01854 79 DFLIGK---------------RFAREAG--MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLH 141 (231)
T ss_pred chhhhH---------------HHHHHCC--CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHh
Confidence 974210 0011100 11222 22223 457999999744211 11111222211 10 0
Q ss_pred CCC--chhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCC
Q 020919 204 VPD--TGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNY 281 (320)
Q Consensus 204 ~~~--~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y 281 (320)
.|. ...+...+++..... . ....-.-....++++++.+++.+++++|.||+-.+.-+....++.-.+-.+-++.
T Consensus 142 l~~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW 217 (231)
T TIGR01854 142 LPLAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW 217 (231)
T ss_pred CCHHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC
Confidence 000 111223333321110 0 0000011233567788999999999999999987654433323221233333333
Q ss_pred CCCCCCcEEEEEEeCC
Q 020919 282 CGEFDNAGAMMSIDEE 297 (320)
Q Consensus 282 ~~~~~n~ga~l~i~~~ 297 (320)
. ..+.++.++++
T Consensus 218 ~----~~~~~~~~~~~ 229 (231)
T TIGR01854 218 Y----RQGSILRVDAD 229 (231)
T ss_pred c----cCCeEEEEcCC
Confidence 1 23556666554
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.43 E-value=3.9e-06 Score=69.99 Aligned_cols=117 Identities=22% Similarity=0.214 Sum_probs=73.7
Q ss_pred eEEEecCCCCHH----------HHHHHHHhCCCCCCCeEEEeccccCCCCCc-H-HHHHHHHHhhhhCCCcEEEecCCcc
Q 020919 68 MKICGDVHGQYS----------DLLRLFEYGGYPPKANYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHE 135 (320)
Q Consensus 68 i~ViGDIHG~~~----------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-~-evl~ll~~Lk~~~p~~v~~lrGNHE 135 (320)
++.++|+|=... .|.++++.......+.++++||+++.|... . +...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122244444444567889999999998742 1 2233343333211 36999999999
Q ss_pred ccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhh
Q 020919 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 215 (320)
Q Consensus 136 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 215 (320)
. ++++|..+.+.....+
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~~~---------------------- 96 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGSGR---------------------- 96 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcccc----------------------
Confidence 8 8889976543211000
Q ss_pred cCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 216 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 216 sdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
.. . -+.+++.+++++.++++++.||+-.+..+.
T Consensus 97 -----------~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 97 -----------ER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred -----------cc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 0 056778899999999999999998865544
No 49
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.31 E-value=3.9e-05 Score=68.97 Aligned_cols=193 Identities=18% Similarity=0.154 Sum_probs=96.0
Q ss_pred ceEEEecCCC----CHHHH----HHHHHhCCCCCCCeEEEeccccCCCCCcH--HHH-HHHHHhhhhCCCcEEEecCCcc
Q 020919 67 PMKICGDVHG----QYSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHE 135 (320)
Q Consensus 67 ~i~ViGDIHG----~~~~L----~~il~~~~~~~~~~~vfLGD~VDRG~~s~--evl-~ll~~Lk~~~p~~v~~lrGNHE 135 (320)
+++++||+|- ....+ ..+++.+.....+.+|++||++|.|.... +.+ ..+..|. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 5789999995 22223 33344433334567889999999998433 222 2222222 12345899999999
Q ss_pred ccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhh
Q 020919 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 215 (320)
Q Consensus 136 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllW 215 (320)
... ...+.. ..+.++-+.+.++.-|- ..-++++|-=+.+.-...+ ...|
T Consensus 81 ~~~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~~------------------~~~~ 129 (214)
T cd07399 81 LVL-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRPD------------------SIDY 129 (214)
T ss_pred chh-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcCc------------------cccc
Confidence 432 111111 12222223334443221 1247778864322110000 0001
Q ss_pred cCCCCCCCCcccCCCCcccccChHHHHHHHHHc-CCceEEEeeeeeccCeEEe-----cCCeEEEEcCCCCCCCCCCCcE
Q 020919 216 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRH-DLDLVCRAHQVVEDGYEFF-----ADRQLVTIFSAPNYCGEFDNAG 289 (320)
Q Consensus 216 sdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iIrgH~~~~~G~~~~-----~~~~vitifSa~~y~~~~~n~g 289 (320)
| .....+.+.+.+.++++ ++++++-||.-.. +.... .++.|..+.+........+|..
T Consensus 130 ---------~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 130 ---------D------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred ---------c------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 1 01123456788889988 7999999997653 33322 2344555544322111111111
Q ss_pred -EEEEEeCC-ceEEEEEEcc
Q 020919 290 -AMMSIDEE-LVCSFQILKP 307 (320)
Q Consensus 290 -a~l~i~~~-~~~~~~~~~~ 307 (320)
.++.++++ ..+.+..|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 35566665 3566666655
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.24 E-value=6.3e-05 Score=65.56 Aligned_cols=157 Identities=16% Similarity=0.143 Sum_probs=95.6
Q ss_pred ceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
++.|+||.||...+..+..+.......+.+|.+||++...... .+..- ...+++.++||.|.....
T Consensus 3 ~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~--~l~~~------~~~~i~~V~GN~D~~~~~------ 68 (172)
T COG0622 3 KILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD--ALEGG------LAAKLIAVRGNCDGEVDQ------ 68 (172)
T ss_pred EEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH--Hhhcc------cccceEEEEccCCCcccc------
Confidence 5889999999997666666665566678889999999765421 11110 235799999999986433
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCcEE--EEc-CcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCC
Q 020919 147 DECKRRFNVRLWKAFTDCFNCLPVAA--LID-EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVK 223 (320)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~f~~LP~~~--~i~-~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~ 223 (320)
..+|-.. .++ -+++++||.... .
T Consensus 69 -------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~---------------------------------- 94 (172)
T COG0622 69 -------------------EELPEELVLEVGGVKIFLTHGHLYF-V---------------------------------- 94 (172)
T ss_pred -------------------ccCChhHeEEECCEEEEEECCCccc-c----------------------------------
Confidence 2223222 233 489999996432 1
Q ss_pred CcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEE--cCCCCCCCCCCCcEEEEEEeCC-ceE
Q 020919 224 GWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTI--FSAPNYCGEFDNAGAMMSIDEE-LVC 300 (320)
Q Consensus 224 ~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~viti--fSa~~y~~~~~n~ga~l~i~~~-~~~ 300 (320)
......++.+-+..+++.+|.|||-.+. ++.. ++ ++-| =|.+.+-+ .+..+++.++.+ .++
T Consensus 95 -----------~~~~~~l~~la~~~~~Dvli~GHTH~p~-~~~~-~~-i~~vNPGS~s~pr~--~~~~sy~il~~~~~~~ 158 (172)
T COG0622 95 -----------KTDLSLLEYLAKELGADVLIFGHTHKPV-AEKV-GG-ILLVNPGSVSGPRG--GNPASYAILDVDNLEV 158 (172)
T ss_pred -----------ccCHHHHHHHHHhcCCCEEEECCCCccc-EEEE-CC-EEEEcCCCcCCCCC--CCCcEEEEEEcCCCEE
Confidence 0123455666777889999999998753 3222 22 2222 24444433 244455666544 455
Q ss_pred EEEEEcc
Q 020919 301 SFQILKP 307 (320)
Q Consensus 301 ~~~~~~~ 307 (320)
....+..
T Consensus 159 ~~~~~~~ 165 (172)
T COG0622 159 EVLFLER 165 (172)
T ss_pred EEEEeec
Confidence 5555543
No 51
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.16 E-value=4.2e-06 Score=77.97 Aligned_cols=69 Identities=20% Similarity=0.088 Sum_probs=50.0
Q ss_pred ceEEEecCCCC----HHHHHHHHHhCCCCCCCeEEEeccccCCC--CCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQ----YSDLLRLFEYGGYPPKANYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~----~~~L~~il~~~~~~~~~~~vfLGD~VDRG--~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++++++|+|.. ...+.++++.......+.++++||++|++ ...-++...+..|+.. ..++.+.||||..
T Consensus 51 rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 51 KILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred EEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 59999999976 55677777765555667888999999954 2233455566666543 3599999999974
No 52
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.15 E-value=3.8e-06 Score=75.14 Aligned_cols=70 Identities=27% Similarity=0.236 Sum_probs=51.4
Q ss_pred ceEEEecCCCCHH----HHHHHHHhCCCCCCCeEEEeccccCCCCCcH-HHHHHHHHhhhhCCCcEEEecCCccccc
Q 020919 67 PMKICGDVHGQYS----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 67 ~i~ViGDIHG~~~----~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
++++++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..++ .+..++.+.||||...
T Consensus 3 ~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 3 RIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred EEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 6899999998743 6677777655455677889999999987765 4445544432 3456999999999853
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.13 E-value=0.00012 Score=64.80 Aligned_cols=69 Identities=12% Similarity=0.045 Sum_probs=43.2
Q ss_pred ceEEEecCCCCHH------------HHHHHHHhCCCCCCCeEEEeccccCCCCCc---HHHHHHHHHhhhhCCCcEEEec
Q 020919 67 PMKICGDVHGQYS------------DLLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLLR 131 (320)
Q Consensus 67 ~i~ViGDIHG~~~------------~L~~il~~~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~Lk~~~p~~v~~lr 131 (320)
++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++.
T Consensus 4 ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 83 (199)
T cd07383 4 KILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATF 83 (199)
T ss_pred EEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 5899999996221 111222222223457799999999977653 4555554443333345689999
Q ss_pred CCcc
Q 020919 132 GNHE 135 (320)
Q Consensus 132 GNHE 135 (320)
||||
T Consensus 84 GNHD 87 (199)
T cd07383 84 GNHD 87 (199)
T ss_pred ccCC
Confidence 9999
No 54
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.08 E-value=0.0002 Score=66.71 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=46.2
Q ss_pred ceEEEecCC-C-----------CHHHHHHHHHhCCC--CCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecC
Q 020919 67 PMKICGDVH-G-----------QYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 132 (320)
Q Consensus 67 ~i~ViGDIH-G-----------~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrG 132 (320)
+++.|+|+| . ....|.++++.+.. +..+-+|+.||+++.|. .+-+..+...-...+..++.+.|
T Consensus 16 ~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~G 93 (275)
T PRK11148 16 RILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLPG 93 (275)
T ss_pred EEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeCC
Confidence 589999999 1 24667777776532 23567889999999874 23333333322233556999999
Q ss_pred Ccccc
Q 020919 133 NHECA 137 (320)
Q Consensus 133 NHE~~ 137 (320)
|||..
T Consensus 94 NHD~~ 98 (275)
T PRK11148 94 NHDFQ 98 (275)
T ss_pred CCCCh
Confidence 99973
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.02 E-value=0.00032 Score=64.59 Aligned_cols=71 Identities=13% Similarity=0.016 Sum_probs=43.4
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHhCCC--CCCCeEEEeccccCCCCCcH---HHHHHHHH-hhhh-C
Q 020919 67 PMKICGDVHGQY----------------SDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSL---ETICLLLA-YKIK-Y 123 (320)
Q Consensus 67 ~i~ViGDIHG~~----------------~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~---evl~ll~~-Lk~~-~ 123 (320)
+++++||+|-.. ..|+++++.+.. +..+-++++||+++.|...- +....+.. ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 468889988763 234556665432 24566889999999887541 11122211 2211 2
Q ss_pred CCcEEEecCCcccc
Q 020919 124 PENFFLLRGNHECA 137 (320)
Q Consensus 124 p~~v~~lrGNHE~~ 137 (320)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 56
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.99 E-value=1.4e-05 Score=72.76 Aligned_cols=68 Identities=21% Similarity=0.156 Sum_probs=48.5
Q ss_pred ceEEEecCCCCH------HHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~~------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++.+++|+|+++ ..|.++++.+.....+.+|+.||++++.+.+.+.+..+.++ .+..++.+.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999763 23556666554445677889999999876666655555442 345699999999975
No 57
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.89 E-value=7.5e-05 Score=75.58 Aligned_cols=112 Identities=19% Similarity=0.245 Sum_probs=59.3
Q ss_pred CceEEEecCC-CCH----HHHHHHHHhCC-C--------CCCCeEEEeccccCC-CCCc---------------HHHHHH
Q 020919 66 APMKICGDVH-GQY----SDLLRLFEYGG-Y--------PPKANYLFLGDYVDR-GKQS---------------LETICL 115 (320)
Q Consensus 66 ~~i~ViGDIH-G~~----~~L~~il~~~~-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~l 115 (320)
..+++++|+| |.- ..+..+++.+. . ...+.+|++||++|. |..+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4689999999 652 23344433322 1 223678999999994 3221 123334
Q ss_pred HHHhhhhCCCcEEEecCCccccchhhhc-cchHHHHHHhhHHHHHH-HHHHHccCCcEEEEcC-cEEEecCCC
Q 020919 116 LLAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNVRLWKA-FTDCFNCLPVAALIDE-KILCMHGGL 185 (320)
Q Consensus 116 l~~Lk~~~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~-~~~~f~~LP~~~~i~~-~~l~vHgGi 185 (320)
|..+. ..-.+++++||||........ .+.... . +.+.. -..++.. |....+++ +++++||-.
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l-~----~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEI-R----SLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhhccCCCCccHHH-H----HhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 44332 234699999999986532211 121111 1 11111 1233333 65544444 789999863
No 58
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.85 E-value=4.2e-05 Score=70.98 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=48.8
Q ss_pred ceEEEecCC--C-----------CHHHHHHHHHhCCCCCCCeEEEeccccCCCCC-cHHHHHHHHHhhhhCCCcEEEecC
Q 020919 67 PMKICGDVH--G-----------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 132 (320)
Q Consensus 67 ~i~ViGDIH--G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~-s~evl~ll~~Lk~~~p~~v~~lrG 132 (320)
+++++||+| . ....|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 578999999 2 24566777776654446778899999998873 223333333322223356999999
Q ss_pred Cccccch
Q 020919 133 NHECASI 139 (320)
Q Consensus 133 NHE~~~~ 139 (320)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 59
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.76 E-value=0.00036 Score=70.86 Aligned_cols=71 Identities=24% Similarity=0.294 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHcCCc----eEEEeeeeec--cCeEE-ecCCeEEEE---cCCCCCCCCCCCcEEEEEEeCCceEEEEEEc
Q 020919 237 GPDKVSEFLKRHDLD----LVCRAHQVVE--DGYEF-FADRQLVTI---FSAPNYCGEFDNAGAMMSIDEELVCSFQILK 306 (320)
Q Consensus 237 g~~~~~~fl~~~~~~----~iIrgH~~~~--~G~~~-~~~~~viti---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 306 (320)
.++..+..|+..|++ .||-||+||. +|=.+ .++||++.| ||.. |...++=+|=-| +.++-........
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceeccCC
Confidence 467788899999998 9999999987 67554 578999999 5554 666544455444 4454455555555
Q ss_pred cCc
Q 020919 307 PAE 309 (320)
Q Consensus 307 ~~~ 309 (320)
|..
T Consensus 585 pF~ 587 (640)
T PF06874_consen 585 PFE 587 (640)
T ss_pred CCC
Confidence 544
No 60
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.74 E-value=7.1e-05 Score=69.09 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=47.8
Q ss_pred ceEEEecCCC-C-----------HHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHH----HHHHHhhhhCCCcEEEe
Q 020919 67 PMKICGDVHG-Q-----------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 130 (320)
Q Consensus 67 ~i~ViGDIHG-~-----------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~~l 130 (320)
+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 5788999993 2 234555555544445677899999999986665543 33344443333579999
Q ss_pred cCCcccc
Q 020919 131 RGNHECA 137 (320)
Q Consensus 131 rGNHE~~ 137 (320)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999985
No 61
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.69 E-value=0.00012 Score=66.01 Aligned_cols=69 Identities=23% Similarity=0.236 Sum_probs=45.4
Q ss_pred ceEEEecCCCC------------HHHHHHHHHhCCCC--CCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecC
Q 020919 67 PMKICGDVHGQ------------YSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 132 (320)
Q Consensus 67 ~i~ViGDIHG~------------~~~L~~il~~~~~~--~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrG 132 (320)
++++++|+|=. ...|.++++.+... ..+-+|++||+++.|.. +....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34577777755433 56778899999998753 2222222221222456999999
Q ss_pred Ccccc
Q 020919 133 NHECA 137 (320)
Q Consensus 133 NHE~~ 137 (320)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 62
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.63 E-value=0.00011 Score=70.67 Aligned_cols=71 Identities=23% Similarity=0.340 Sum_probs=48.0
Q ss_pred ceEEEecCC-C-----------CHHHHHHHHHhCCCCCCCeEEEeccccCCC-CCcHHHHHHHHH--hh--hhCCCcEEE
Q 020919 67 PMKICGDVH-G-----------QYSDLLRLFEYGGYPPKANYLFLGDYVDRG-KQSLETICLLLA--YK--IKYPENFFL 129 (320)
Q Consensus 67 ~i~ViGDIH-G-----------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--Lk--~~~p~~v~~ 129 (320)
+++.+||+| | ....|.++++.+.....+.+|+.||++|+. +.+.+++.++.. ++ ...+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 578899999 4 234556666655555667899999999985 445555444432 11 123457999
Q ss_pred ecCCcccc
Q 020919 130 LRGNHECA 137 (320)
Q Consensus 130 lrGNHE~~ 137 (320)
|.||||..
T Consensus 82 I~GNHD~~ 89 (340)
T PHA02546 82 LVGNHDMY 89 (340)
T ss_pred EccCCCcc
Confidence 99999984
No 63
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.61 E-value=0.00042 Score=62.85 Aligned_cols=199 Identities=17% Similarity=0.229 Sum_probs=103.6
Q ss_pred EEEecCCCC------HHHHHHHHHhCCCCCCCeEEEeccccC--CCCC-----cHHHHHHHHHhhhhCCCcEEEecCCcc
Q 020919 69 KICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVD--RGKQ-----SLETICLLLAYKIKYPENFFLLRGNHE 135 (320)
Q Consensus 69 ~ViGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VD--RG~~-----s~evl~ll~~Lk~~~p~~v~~lrGNHE 135 (320)
+.|+|+|=. .+.|.+.|+... +..+.+.++||++| .|.. --+|...|..+ .....+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368999954 334455665433 34577889999997 2322 23444444443 346679999999999
Q ss_pred ccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEE---cCcEEEecCCCCCC-CCChHhhhcC-----------CC
Q 020919 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI---DEKILCMHGGLSPD-LSHLDQIRNL-----------PR 200 (320)
Q Consensus 136 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~~l~vHgGi~p~-~~~l~~i~~i-----------~r 200 (320)
...-+. ++ ... .-+.-+|-...+ +.+++++||-.--. .......+.. ..
T Consensus 79 fll~~~-f~------~~~---------g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGKR-FA------QEA---------GGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHHH-HH------hhc---------CceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 543221 10 000 112334444333 56899999964211 1111111111 11
Q ss_pred CCCCCCchhhhHhhhcCCCCCCCCcccCCCCcc---cccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcC
Q 020919 201 PTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVS---YTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFS 277 (320)
Q Consensus 201 ~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifS 277 (320)
|.. -..-+..-+|+.. .|........ ....++++.+-++++|++.+|.||+-.+.......-.+| -
T Consensus 143 ~l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi-~--- 211 (237)
T COG2908 143 PLR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYI-N--- 211 (237)
T ss_pred HHH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEE-e---
Confidence 100 0001122244443 1222211111 134577888899999999999999987765443221111 1
Q ss_pred CCCCCCCCCCcEEEEEEeCCceE
Q 020919 278 APNYCGEFDNAGAMMSIDEELVC 300 (320)
Q Consensus 278 a~~y~~~~~n~ga~l~i~~~~~~ 300 (320)
+|.-...|++++++.+...
T Consensus 212 ----lGdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGLE 230 (237)
T ss_pred ----cCcchhcceEEEEecCcEE
Confidence 1222356888988877543
No 64
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.58 E-value=0.00018 Score=66.88 Aligned_cols=70 Identities=20% Similarity=0.323 Sum_probs=45.4
Q ss_pred eEEEecCCCCHHHHHHHHHh---CCCCCCCeEEEeccccCCCCC-cHHHHH------HHH---Hh---hhhCCCcEEEec
Q 020919 68 MKICGDVHGQYSDLLRLFEY---GGYPPKANYLFLGDYVDRGKQ-SLETIC------LLL---AY---KIKYPENFFLLR 131 (320)
Q Consensus 68 i~ViGDIHG~~~~L~~il~~---~~~~~~~~~vfLGD~VDRG~~-s~evl~------ll~---~L---k~~~p~~v~~lr 131 (320)
|+|+||+||+++.+.+.++. -...+.+-+|++||+-..+.. ..+.+. -+. ++ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 58999999999998765443 223456778899999754433 232221 111 11 223566689999
Q ss_pred CCcccc
Q 020919 132 GNHECA 137 (320)
Q Consensus 132 GNHE~~ 137 (320)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.55 E-value=0.00016 Score=64.20 Aligned_cols=73 Identities=23% Similarity=0.261 Sum_probs=48.9
Q ss_pred ceEEEecCC-CCH--------------HHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHh-hhh--CCCcEE
Q 020919 67 PMKICGDVH-GQY--------------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAY-KIK--YPENFF 128 (320)
Q Consensus 67 ~i~ViGDIH-G~~--------------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~L-k~~--~p~~v~ 128 (320)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+... +.. .+-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 321 23666666655555677899999999887655544433322 111 245699
Q ss_pred EecCCccccch
Q 020919 129 LLRGNHECASI 139 (320)
Q Consensus 129 ~lrGNHE~~~~ 139 (320)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 66
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.51 E-value=0.0084 Score=54.07 Aligned_cols=203 Identities=18% Similarity=0.203 Sum_probs=112.5
Q ss_pred CceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEecccc--CCCCCcHHHHHH--HHHhhhhCCCcEEEecCCccccchhh
Q 020919 66 APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYV--DRGKQSLETICL--LLAYKIKYPENFFLLRGNHECASINR 141 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~V--DRG~~s~evl~l--l~~Lk~~~p~~v~~lrGNHE~~~~~~ 141 (320)
-++..+.|+||.++.+.++++.+.....+.+++.||+. +.|+.-. +..+ +..++ ...-.++.++||.|...+..
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~-~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEV-AEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHH-HHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 46899999999999999999988766778888999999 8887432 2222 33333 24457999999988865432
Q ss_pred hccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCC-C-----ChHhhhcCCCCCCCCCchhhhHhhh
Q 020919 142 IYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL-S-----HLDQIRNLPRPTAVPDTGLLCDLLW 215 (320)
Q Consensus 142 ~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~-~-----~l~~i~~i~r~~~~~~~~~~~dllW 215 (320)
. ....+..+. +-...+++-.+|-=||..|.. . +-++|.+..+...........=++.
T Consensus 82 ~-------l~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 V-------LKNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred H-------HHhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 1 111111111 122233432333345554421 1 1233332111000000000000111
Q ss_pred cCCC-CCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEE
Q 020919 216 SDPG-RDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSI 294 (320)
Q Consensus 216 sdP~-~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i 294 (320)
.-|. ..... .+-| -..-|..+++++.++.+-.+.|.||=--..|+..-.+ ||+-.|.-.+ .-+.|++.+
T Consensus 145 HaPP~gt~~d---~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 145 HAPPYGTLLD---TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred cCCCCCcccc---CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 1111 11000 1222 1345899999999999999999999877778875433 4555554332 356778877
Q ss_pred eCC
Q 020919 295 DEE 297 (320)
Q Consensus 295 ~~~ 297 (320)
+++
T Consensus 215 ~~~ 217 (226)
T COG2129 215 EKE 217 (226)
T ss_pred cCc
Confidence 766
No 67
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.48 E-value=0.00033 Score=63.63 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=43.7
Q ss_pred CceEEEecCC-CCHHH----------------HHHHHHhCCCCCCCeEEEeccccCCCCCc---HHHHHHHHHhhhhCCC
Q 020919 66 APMKICGDVH-GQYSD----------------LLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 125 (320)
Q Consensus 66 ~~i~ViGDIH-G~~~~----------------L~~il~~~~~~~~~~~vfLGD~VDRG~~s---~evl~ll~~Lk~~~p~ 125 (320)
.+..||+|+| |--.. |.++.+.......+.+|++||+++..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 54332 22333333334457899999999765542 2222333332 24
Q ss_pred cEEEecCCccccc
Q 020919 126 NFFLLRGNHECAS 138 (320)
Q Consensus 126 ~v~~lrGNHE~~~ 138 (320)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 68
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.46 E-value=1.2e-05 Score=78.95 Aligned_cols=238 Identities=14% Similarity=0.033 Sum_probs=156.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceEEEecCCCCHHHHHHHHHhCCCCCC-CeEEEeccccCCCCCcHHH
Q 020919 38 QLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLET 112 (320)
Q Consensus 38 ~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~ViGDIHG~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~ev 112 (320)
-|...++..++.-+.+++..+|+.....+ -.+.++|.||.+.|+.++++.. |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 36677889999999999999998887743 3789999999999999988864 333 3499999999999999999
Q ss_pred HHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhH---HHHHHHHHHHccCC-cEEEEcCcEEEecCCCCCC
Q 020919 113 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV---RLWKAFTDCFNCLP-VAALIDEKILCMHGGLSPD 188 (320)
Q Consensus 113 l~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LP-~~~~i~~~~l~vHgGi~p~ 188 (320)
+..+...+...|+...+.|++||+..+...++|..+....++. .++..+. +..++ +.....+.++ -|.-++-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~--~~~~~~i~~~y~g~~l-e~~kvt~e 168 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKID--EEDMDLIESDYSGPVL-EDHKVTLE 168 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccc--cccccccccccCCccc-ccchhhHH
Confidence 9999999999999999999999998888777776554443311 1111111 11111 3333222111 11111100
Q ss_pred C-------------------CC-hHhh----hcCCCCCCCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHH
Q 020919 189 L-------------------SH-LDQI----RNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEF 244 (320)
Q Consensus 189 ~-------------------~~-l~~i----~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~f 244 (320)
+ -+ +++. +.+..+.+.. .-.+..|+++......+....++.+...++.....|
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 0 00 1111 1111222211 445778888876555566667777777788888889
Q ss_pred HHHcCCceEEEeeeeec------------cCeEEecC---CeEEEEcCCCCCCC
Q 020919 245 LKRHDLDLVCRAHQVVE------------DGYEFFAD---RQLVTIFSAPNYCG 283 (320)
Q Consensus 245 l~~~~~~~iIrgH~~~~------------~G~~~~~~---~~vitifSa~~y~~ 283 (320)
|...++.-+.+.|.-+. .+|...++ +.++++|+.+.++-
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 98888888888886431 22222222 24788899887764
No 69
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.44 E-value=0.00028 Score=60.91 Aligned_cols=67 Identities=24% Similarity=0.313 Sum_probs=43.6
Q ss_pred eEEEecCCCCHHHH---------------HHHHHhCC--CCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 020919 68 MKICGDVHGQYSDL---------------LRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 130 (320)
Q Consensus 68 i~ViGDIHG~~~~L---------------~~il~~~~--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~l 130 (320)
+++|+|+|=....- .++++... ..+.+.+|++||++++|..+.. +..+..+ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 36889998655432 22333221 2345789999999999986543 4444333 4569999
Q ss_pred cCCccccch
Q 020919 131 RGNHECASI 139 (320)
Q Consensus 131 rGNHE~~~~ 139 (320)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 70
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.40 E-value=0.00025 Score=60.70 Aligned_cols=47 Identities=23% Similarity=0.205 Sum_probs=29.5
Q ss_pred CCCeEEEeccccCCCCCc-HHH----HHHHHHhhhhC-CCcEEEecCCccccc
Q 020919 92 PKANYLFLGDYVDRGKQS-LET----ICLLLAYKIKY-PENFFLLRGNHECAS 138 (320)
Q Consensus 92 ~~~~~vfLGD~VDRG~~s-~ev----l~ll~~Lk~~~-p~~v~~lrGNHE~~~ 138 (320)
..+.+|++||++|.+... .+. +..+.++.... +-.++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 457899999999987643 222 22222221111 346999999999753
No 71
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.37 E-value=0.0004 Score=68.51 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=45.4
Q ss_pred ceEEEecCC-CC-H------HH----HHHHHHhCCCCCCCeEEEeccccCCCCCcHHHH----HHHHHhhhhCCCcEEEe
Q 020919 67 PMKICGDVH-GQ-Y------SD----LLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 130 (320)
Q Consensus 67 ~i~ViGDIH-G~-~------~~----L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl----~ll~~Lk~~~p~~v~~l 130 (320)
+++.++|+| |. + .+ |..+++.+.....+.+|+.||++|++..+.+.. .++..|+. .+-.++++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 578899999 32 1 11 334444444456678899999999986554432 23334432 23469999
Q ss_pred cCCcccc
Q 020919 131 RGNHECA 137 (320)
Q Consensus 131 rGNHE~~ 137 (320)
.||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999975
No 72
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.32 E-value=0.00045 Score=59.80 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=34.2
Q ss_pred HHHHHHhCCCCCCCeEEEeccccCCCCCcH-HHHHHH-HHhhhhCCCcEEEecCCccccc
Q 020919 81 LLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 81 L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
+.++.+.+...+.+.+|++||++|....+. +....+ .......+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444443445678999999998654332 222211 1112234557999999999853
No 73
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=97.31 E-value=0.00064 Score=53.45 Aligned_cols=55 Identities=13% Similarity=0.318 Sum_probs=41.0
Q ss_pred cccccCccc-ccCChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 020919 2 ATTQGQQQG-TIMDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLEL 64 (320)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~ 64 (320)
.+|+|+++. ..|+.+.+.++++.+.+++ .|+...+..|+.++.++|+++|+++++
T Consensus 40 ~sY~GP~l~~~~it~efv~~mie~FK~~K--------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 40 DSYDGPRLEDEPITLEFVKAMIEWFKNQK--------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp SS--SS--BTTB--HHHHHHHHHHHHCT------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 478999998 7899999999999999877 699999999999999999999999975
No 74
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.21 E-value=0.00094 Score=65.78 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=55.5
Q ss_pred ceEEEecCCCC------------HHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhh------------
Q 020919 67 PMKICGDVHGQ------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIK------------ 122 (320)
Q Consensus 67 ~i~ViGDIHG~------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~------------ 122 (320)
++++++|+|-- +..|.++++.+.....+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 5 KIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~~ 84 (405)
T TIGR00583 5 RILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELEF 84 (405)
T ss_pred EEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchhh
Confidence 68999999942 567888888876666778889999999999998887665443221
Q ss_pred ------------------------CCCcEEEecCCccccc
Q 020919 123 ------------------------YPENFFLLRGNHECAS 138 (320)
Q Consensus 123 ------------------------~p~~v~~lrGNHE~~~ 138 (320)
..-.|+.+-||||...
T Consensus 85 Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 85 LSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred ccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999964
No 75
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.19 E-value=0.00063 Score=60.44 Aligned_cols=28 Identities=18% Similarity=0.094 Sum_probs=22.1
Q ss_pred ChHHHHHHHHHcCCceEEEeeeeeccCe
Q 020919 237 GPDKVSEFLKRHDLDLVCRAHQVVEDGY 264 (320)
Q Consensus 237 g~~~~~~fl~~~~~~~iIrgH~~~~~G~ 264 (320)
.+..+.+.++..+++.+|.||+-.+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 4556777788999999999999875433
No 76
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.18 E-value=0.00087 Score=60.90 Aligned_cols=45 Identities=7% Similarity=-0.067 Sum_probs=30.2
Q ss_pred cChHHHHHHHHHcCCceEEEeeeeeccCeE---EecCCeEEEEcCCCCCC
Q 020919 236 FGPDKVSEFLKRHDLDLVCRAHQVVEDGYE---FFADRQLVTIFSAPNYC 282 (320)
Q Consensus 236 fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~---~~~~~~vitifSa~~y~ 282 (320)
++...+.+.+++.++++++-||+-...-.. ...+| |+.+++|+=|
T Consensus 180 ~~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~ 227 (232)
T cd07393 180 GDDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADY 227 (232)
T ss_pred CCHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchh
Confidence 355677888899999999999988643322 12344 5566665544
No 77
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.17 E-value=0.00097 Score=61.56 Aligned_cols=71 Identities=20% Similarity=0.177 Sum_probs=42.3
Q ss_pred eEEEecCCCCH------HHH-HHHHHhCCCCCCCeEEEeccccCCCCCc-------H----HHHHHHHHhhhhCCCcEEE
Q 020919 68 MKICGDVHGQY------SDL-LRLFEYGGYPPKANYLFLGDYVDRGKQS-------L----ETICLLLAYKIKYPENFFL 129 (320)
Q Consensus 68 i~ViGDIHG~~------~~L-~~il~~~~~~~~~~~vfLGD~VDRG~~s-------~----evl~ll~~Lk~~~p~~v~~ 129 (320)
++.++|+|-.. ... ..+++.+.....+.+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 56789999532 112 2334444334456888999999986521 1 2222222222223567999
Q ss_pred ecCCccccc
Q 020919 130 LRGNHECAS 138 (320)
Q Consensus 130 lrGNHE~~~ 138 (320)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 78
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.16 E-value=0.0016 Score=59.99 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=51.8
Q ss_pred ceEEEecCCCC------HHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHh--hhhCCCcEEEecCCccccc
Q 020919 67 PMKICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAY--KIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 67 ~i~ViGDIHG~------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~L--k~~~p~~v~~lrGNHE~~~ 138 (320)
+++.|+|+|-. ...+.++++.....+.+.+|+.||+.+.|. .+-+..+..+ +...+..++.++||||...
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 57889999977 344566667777666688999999999963 2222333222 2356788999999999986
Q ss_pred hhh
Q 020919 139 INR 141 (320)
Q Consensus 139 ~~~ 141 (320)
.+.
T Consensus 80 ~~~ 82 (301)
T COG1409 80 VNG 82 (301)
T ss_pred hHH
Confidence 653
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.96 E-value=0.002 Score=60.11 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=41.5
Q ss_pred CceEEEecCCC----CHHHHHHHHHhCCCCCCCeEEEeccccCCCCCc----HH-HHHHHHHhhhhCCCcEEEecCCccc
Q 020919 66 APMKICGDVHG----QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQS----LE-TICLLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 66 ~~i~ViGDIHG----~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s----~e-vl~ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
-+++|+||.|. +...+.++.+. ....+-+|++||+++-+... .+ .+..+..+... -.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASY--VPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhc--CCcEEcCccccc
Confidence 36899999995 33333344333 23456688999999644322 22 22223222222 348999999998
Q ss_pred cch
Q 020919 137 ASI 139 (320)
Q Consensus 137 ~~~ 139 (320)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.89 E-value=0.0022 Score=60.31 Aligned_cols=72 Identities=22% Similarity=0.226 Sum_probs=48.0
Q ss_pred CceEEEecCCCCHHH--HHHHHHhCCCCCCCeEEEeccccCC-CCCcHHH-HHHHHHhhhhCCCcEEEecCCccccch
Q 020919 66 APMKICGDVHGQYSD--LLRLFEYGGYPPKANYLFLGDYVDR-GKQSLET-ICLLLAYKIKYPENFFLLRGNHECASI 139 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~VDR-G~~s~ev-l~ll~~Lk~~~p~~v~~lrGNHE~~~~ 139 (320)
.+++-++|+|-.... ..+.+........+-+++.|||+|+ .+.+.+. ...+..| ..|-.++.+.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L--~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKL--KAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhh--hccCCEEEEecccccccc
Confidence 358999999988665 2222333222233778899999996 5555444 4455544 466779999999987644
No 81
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.79 E-value=0.0043 Score=56.66 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=38.7
Q ss_pred EEEecCC--CCH---HHHHHHHHhC-CCC----CCCeEEEeccccCCCC-----C-------cHH----HHHHHHHhhhh
Q 020919 69 KICGDVH--GQY---SDLLRLFEYG-GYP----PKANYLFLGDYVDRGK-----Q-------SLE----TICLLLAYKIK 122 (320)
Q Consensus 69 ~ViGDIH--G~~---~~L~~il~~~-~~~----~~~~~vfLGD~VDRG~-----~-------s~e----vl~ll~~Lk~~ 122 (320)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+.. . ..+ +..++..|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 2223333322 221 2367889999999731 0 011 222333332
Q ss_pred CCCcEEEecCCccccc
Q 020919 123 YPENFFLLRGNHECAS 138 (320)
Q Consensus 123 ~p~~v~~lrGNHE~~~ 138 (320)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.55 E-value=0.0057 Score=52.12 Aligned_cols=119 Identities=21% Similarity=0.286 Sum_probs=80.1
Q ss_pred EEEecCCCCHHHHHHHHHhCC--CCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch
Q 020919 69 KICGDVHGQYSDLLRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (320)
Q Consensus 69 ~ViGDIHG~~~~L~~il~~~~--~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~ 146 (320)
.|+||+||+++.+.+-++... -.+-+-++++||+..-....-+ +.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999987776532 1345678899999976655533 33333335567888999999998
Q ss_pred HHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCCCCCcc
Q 020919 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (320)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~~~~~~ 226 (320)
+-.||++|.= |..+...++... +
T Consensus 69 ----------------------------~~DILlTh~w-P~gi~~~~~~~~-------------------~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEW-PKGISKLSKVPF-------------------E--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCC-chhhhhhCCCcc-------------------c---------
Confidence 4479999963 222211121110 0
Q ss_pred cCCCCcccccChHHHHHHHHHcCCceEEEeeeee
Q 020919 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 260 (320)
Q Consensus 227 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~ 260 (320)
..+..-|...+++++++..=++.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012235788999999999999999999654
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.54 E-value=0.0053 Score=53.30 Aligned_cols=48 Identities=23% Similarity=0.267 Sum_probs=30.9
Q ss_pred CCCCeEEEeccccCCCCCcH--H---HHHHHHHhhhh-C----CCcEEEecCCccccc
Q 020919 91 PPKANYLFLGDYVDRGKQSL--E---TICLLLAYKIK-Y----PENFFLLRGNHECAS 138 (320)
Q Consensus 91 ~~~~~~vfLGD~VDRG~~s~--e---vl~ll~~Lk~~-~----p~~v~~lrGNHE~~~ 138 (320)
...+.+|++||++|.+.... + .+..+..+... . +-.++.+.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34578999999999887432 2 23333232111 1 356999999999864
No 84
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.52 E-value=0.062 Score=49.79 Aligned_cols=23 Identities=13% Similarity=0.082 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHcCCceEEEeeee
Q 020919 237 GPDKVSEFLKRHDLDLVCRAHQV 259 (320)
Q Consensus 237 g~~~~~~fl~~~~~~~iIrgH~~ 259 (320)
.++..+..|+..+-.+|.-||+-
T Consensus 204 ~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 204 EPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred CHHHHHHHHHhhCCcEEEecCCC
Confidence 67889999999999999999975
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.38 E-value=0.014 Score=49.75 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=43.6
Q ss_pred ceEEEecCCCC------------HHHHHHH-HHhC--CCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEec
Q 020919 67 PMKICGDVHGQ------------YSDLLRL-FEYG--GYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 131 (320)
Q Consensus 67 ~i~ViGDIHG~------------~~~L~~i-l~~~--~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lr 131 (320)
-++.+||.|=. .+....+ +... -..|++.+.+|||+.-.-..-.+...++.+| |++.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 36788888843 3333322 2211 1246677889999986544444444444443 68899999
Q ss_pred CCccccchh
Q 020919 132 GNHECASIN 140 (320)
Q Consensus 132 GNHE~~~~~ 140 (320)
||||..--.
T Consensus 81 GNhDk~~~~ 89 (186)
T COG4186 81 GNHDKCHPM 89 (186)
T ss_pred CCCCCCccc
Confidence 999986443
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.32 E-value=0.0066 Score=55.35 Aligned_cols=66 Identities=26% Similarity=0.290 Sum_probs=42.8
Q ss_pred ceEEEecCCCCH---------HHHHHHHHhCCCC-CCCeEEEeccccCCCCCcH-----HHHHHHHHhhhhCCCcEEEec
Q 020919 67 PMKICGDVHGQY---------SDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 131 (320)
Q Consensus 67 ~i~ViGDIHG~~---------~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~-----evl~ll~~Lk~~~p~~v~~lr 131 (320)
+++.++|+||.+ ..+.++++...-. ++.-++..||+++.++.+. .++..+-++. -. +...
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC-EEee
Confidence 478899999886 5666777665433 3335567899999887643 4444444332 23 3456
Q ss_pred CCcccc
Q 020919 132 GNHECA 137 (320)
Q Consensus 132 GNHE~~ 137 (320)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.30 E-value=0.0077 Score=53.51 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=32.9
Q ss_pred CCCeEEEeccccCCCCCc--HHHHHHHHHhhhhCC----CcEEEecCCcccc
Q 020919 92 PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 137 (320)
Q Consensus 92 ~~~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p----~~v~~lrGNHE~~ 137 (320)
..+-++||||++|.|+.+ .+....+..++..++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457789999999999864 235555555543322 4688999999975
No 88
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.76 E-value=0.027 Score=55.07 Aligned_cols=73 Identities=21% Similarity=0.177 Sum_probs=51.5
Q ss_pred ceEEEecCCCC-------------HHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHh-hhhC--CCcEEEe
Q 020919 67 PMKICGDVHGQ-------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAY-KIKY--PENFFLL 130 (320)
Q Consensus 67 ~i~ViGDIHG~-------------~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~L-k~~~--p~~v~~l 130 (320)
+++.++|.|=- +.+|..+++.+.-...+-+|.-||++|++.-|.+++..+... +... .-.|++|
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I 81 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVI 81 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEe
Confidence 56777888843 345556666655555677889999999998888887766443 2222 2369999
Q ss_pred cCCccccch
Q 020919 131 RGNHECASI 139 (320)
Q Consensus 131 rGNHE~~~~ 139 (320)
-||||...-
T Consensus 82 ~GNHD~~~~ 90 (390)
T COG0420 82 AGNHDSPSR 90 (390)
T ss_pred cCCCCchhc
Confidence 999998653
No 89
>PLN02533 probable purple acid phosphatase
Probab=95.69 E-value=0.014 Score=57.92 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=40.7
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcH--H-HHHHHHHhhhhCCCcEEEecCCccccc
Q 020919 65 EAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 65 ~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~--e-vl~ll~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
.-+++++||+|-. ......++.+.....+-+|++||+++-+...- + ...++..+.... -++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 3468999999632 22223333333334567888999997654321 1 122233332223 4899999999863
No 90
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.69 E-value=0.023 Score=50.46 Aligned_cols=66 Identities=17% Similarity=0.175 Sum_probs=42.1
Q ss_pred ecCCCCHHHHHHHHHhCCC-CCCCeEEEeccccCCCCCcHHH-HHHHHHhhhhC---------------------CCcEE
Q 020919 72 GDVHGQYSDLLRLFEYGGY-PPKANYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFF 128 (320)
Q Consensus 72 GDIHG~~~~L~~il~~~~~-~~~~~~vfLGD~VDRG~~s~ev-l~ll~~Lk~~~---------------------p~~v~ 128 (320)
=|++|+=.=|.++++.+.. -..+.++||||++|.|--+-+- -....+++..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3567776667777775543 3456788999999987544332 23333332222 14578
Q ss_pred EecCCcccc
Q 020919 129 LLRGNHECA 137 (320)
Q Consensus 129 ~lrGNHE~~ 137 (320)
.|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999984
No 91
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=95.40 E-value=0.018 Score=52.15 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=43.9
Q ss_pred cCceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcH-------------------------HHHHHHHHh
Q 020919 65 EAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL-------------------------ETICLLLAY 119 (320)
Q Consensus 65 ~~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~-------------------------evl~ll~~L 119 (320)
..++..++|.||+++.+.++.+.+.-...|-++|+||++-....+- |.+.-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3568999999999999999988766556788999999985443222 222333333
Q ss_pred hhhCCCcEEEecCCccccc
Q 020919 120 KIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 120 k~~~p~~v~~lrGNHE~~~ 138 (320)
--..+-.++.|+||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 3345567999999999853
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.35 E-value=0.023 Score=52.83 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=38.5
Q ss_pred ceEEEecCCCCH----------------HHHHHHHHhCCCCCCCeEEE-eccccCCCCCc-----------HHHHHHHHH
Q 020919 67 PMKICGDVHGQY----------------SDLLRLFEYGGYPPKANYLF-LGDYVDRGKQS-----------LETICLLLA 118 (320)
Q Consensus 67 ~i~ViGDIHG~~----------------~~L~~il~~~~~~~~~~~vf-LGD~VDRG~~s-----------~evl~ll~~ 118 (320)
.|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 467899999996 33555665544332333333 79999876522 224444444
Q ss_pred hhhhCCCcEEEecCCccc
Q 020919 119 YKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 119 Lk~~~p~~v~~lrGNHE~ 136 (320)
+. + -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 32 2 2455699996
No 93
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.76 E-value=0.1 Score=47.65 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=58.5
Q ss_pred ecCceEEEecCCCCHHHHH----------------HHHH-hCCCCCCCeEEEeccccCCCCC-----cHHHHHHHHHhhh
Q 020919 64 LEAPMKICGDVHGQYSDLL----------------RLFE-YGGYPPKANYLFLGDYVDRGKQ-----SLETICLLLAYKI 121 (320)
Q Consensus 64 ~~~~i~ViGDIHG~~~~L~----------------~il~-~~~~~~~~~~vfLGD~VDRG~~-----s~evl~ll~~Lk~ 121 (320)
...+..||+|+|=-+.... +.+. .......+++|.+||+-.-.+. ..++-.++..++
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~- 96 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD- 96 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-
Confidence 3578999999996554332 2222 1112335689999999864433 233333333333
Q ss_pred hCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCC
Q 020919 122 KYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSP 187 (320)
Q Consensus 122 ~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p 187 (320)
.+ .+++++||||...-....++. ...++.. .+ ++++++||=--+
T Consensus 97 ~~--evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~-~i-~~~~~~HGh~~~ 140 (235)
T COG1407 97 ER--EVIIIRGNHDNGIEEILPGFN------------------VEVVDEL-EI-GGLLFRHGHKEP 140 (235)
T ss_pred cC--cEEEEeccCCCccccccccCC------------------ceeeeeE-Ee-cCEEEEeCCCCC
Confidence 22 599999999986544433331 1222333 23 489999986444
No 94
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.68 E-value=0.27 Score=49.07 Aligned_cols=206 Identities=19% Similarity=0.227 Sum_probs=101.7
Q ss_pred eEEEecCCC-CHH----HHHHHHHhCCCC----CCCeEE-EeccccCC-C-----------CCcHHHHHHHHHhhhhCCC
Q 020919 68 MKICGDVHG-QYS----DLLRLFEYGGYP----PKANYL-FLGDYVDR-G-----------KQSLETICLLLAYKIKYPE 125 (320)
Q Consensus 68 i~ViGDIHG-~~~----~L~~il~~~~~~----~~~~~v-fLGD~VDR-G-----------~~s~evl~ll~~Lk~~~p~ 125 (320)
++.++|+|= ... .+...++.++-+ +..+|+ .-||.||. | .+..|-+..+..+-.+-|.
T Consensus 228 v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp~ 307 (481)
T COG1311 228 VALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVPE 307 (481)
T ss_pred EEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCCC
Confidence 789999995 322 223333332222 233555 57999994 2 1223334444444334454
Q ss_pred --cEEEecCCccccchhhhc-cchHHHHHHhhHHHHHHHHHHHccCCcEEEEcC-cEEEecCCCCCCCCChHhhhc-CCC
Q 020919 126 --NFFLLRGNHECASINRIY-GFYDECKRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRN-LPR 200 (320)
Q Consensus 126 --~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~~l~vHgGi~p~~~~l~~i~~-i~r 200 (320)
.|++.+||||..-....- .+..... .++...+-.|-.=|....+++ .++..||= ++++|.. +++
T Consensus 308 ~I~v~i~PGnhDa~r~a~PQp~~~~~~k-----slf~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~vP~ 376 (481)
T COG1311 308 HIKVFIMPGNHDAVRQALPQPHFPELIK-----SLFSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLVPG 376 (481)
T ss_pred CceEEEecCCCCccccccCCCCcchhhc-----ccccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhCCC
Confidence 589999999996553322 2222222 222222222223355555554 68888873 4666554 333
Q ss_pred CC-CCCCchhhhHhhhcCCCCCCCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCC
Q 020919 201 PT-AVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAP 279 (320)
Q Consensus 201 ~~-~~~~~~~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~ 279 (320)
-. +.+...+..-|.|.--.+...+-.+ .+-|.+ +-|-=.---+.++.||+.. .|+..+.+.+++..+|.+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~~k---D~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPETK---DYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccCCc---CceeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 11 1111222333344322211110000 000100 0011111235678999998 789988888888888887
Q ss_pred CCCCCCCCcEEEEEEeCC
Q 020919 280 NYCGEFDNAGAMMSIDEE 297 (320)
Q Consensus 280 ~y~~~~~n~ga~l~i~~~ 297 (320)
.+. -.+-++.++..
T Consensus 448 ~qT----efqk~vni~p~ 461 (481)
T COG1311 448 EQT----EFQKMVNINPT 461 (481)
T ss_pred chh----ccceEEEecCc
Confidence 653 34556666544
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.65 E-value=0.074 Score=49.08 Aligned_cols=70 Identities=21% Similarity=0.241 Sum_probs=39.9
Q ss_pred ceEEEecCCCC--H--HHHHHHHH-hCCCCCCCeEEEecccc-CCCCCcH------HHHHHHHHhhhhCCCcEEEecCCc
Q 020919 67 PMKICGDVHGQ--Y--SDLLRLFE-YGGYPPKANYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 134 (320)
Q Consensus 67 ~i~ViGDIHG~--~--~~L~~il~-~~~~~~~~~~vfLGD~V-DRG~~s~------evl~ll~~Lk~~~p~~v~~lrGNH 134 (320)
+++++||.-.. . .++.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 47899998764 1 23333332 33324456788999997 5553221 222222221 11234699999999
Q ss_pred ccc
Q 020919 135 ECA 137 (320)
Q Consensus 135 E~~ 137 (320)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.15 E-value=0.084 Score=48.59 Aligned_cols=65 Identities=20% Similarity=0.146 Sum_probs=39.4
Q ss_pred ceEEEecCCCCH----------HHHHHHHHhCCCCCCCeEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCcEEEec
Q 020919 67 PMKICGDVHGQY----------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLR 131 (320)
Q Consensus 67 ~i~ViGDIHG~~----------~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~~lr 131 (320)
+++-++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..++..+-.+. -.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 467889999985 4455666654433445566789999876533 23333333322 234 456
Q ss_pred CCccc
Q 020919 132 GNHEC 136 (320)
Q Consensus 132 GNHE~ 136 (320)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99996
No 97
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.65 E-value=0.09 Score=49.37 Aligned_cols=66 Identities=24% Similarity=0.299 Sum_probs=41.1
Q ss_pred ceEEEecCCCCHHH--------------HHHHHHhCCCC-CCCeEEEeccccCCCCC-c-----HHHHHHHHHhhhhCCC
Q 020919 67 PMKICGDVHGQYSD--------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 125 (320)
Q Consensus 67 ~i~ViGDIHG~~~~--------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~Lk~~~p~ 125 (320)
.++.++|+||++.. +..+++..... +..-++..||+++..+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 46789999998543 55666654432 33456668999987654 2 234555555431
Q ss_pred cEEEecCCcccc
Q 020919 126 NFFLLRGNHECA 137 (320)
Q Consensus 126 ~v~~lrGNHE~~ 137 (320)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3556999964
No 98
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.32 E-value=3.1 Score=35.49 Aligned_cols=115 Identities=24% Similarity=0.390 Sum_probs=77.6
Q ss_pred eEEEecCCC--CHHHHHHHHHhCCCCCC-CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhcc
Q 020919 68 MKICGDVHG--QYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (320)
Q Consensus 68 i~ViGDIHG--~~~~L~~il~~~~~~~~-~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~g 144 (320)
+.++||+|= ...+|-.-|++.-.|+. .+++++|++. |.|++++|..+. +.++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 578999994 33445555666556655 5688999964 778888887764 6899999977653
Q ss_pred chHHHHHHhhHHHHHHHHHHHccCCcEEE--EcC-cEEEecCCCCCCCCChHhhhcCCCCCCCCCchhhhHhhhcCCCCC
Q 020919 145 FYDECKRRFNVRLWKAFTDCFNCLPVAAL--IDE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRD 221 (320)
Q Consensus 145 f~~e~~~~~~~~~~~~~~~~f~~LP~~~~--i~~-~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsdP~~~ 221 (320)
...|..-+ ++. ++-|+||-.- +=|.||
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~--- 96 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP--- 96 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCH---
Confidence 12233222 233 7899998521 114444
Q ss_pred CCCcccCCCCcccccChHHHHHHHHHcCCceEEEeeeeeccCeE
Q 020919 222 VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVEDGYE 265 (320)
Q Consensus 222 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrgH~~~~~G~~ 265 (320)
+++.-.-+..+++.++-|||..-+.|+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 356666778899999999998877665
No 99
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=92.85 E-value=2.7 Score=38.99 Aligned_cols=48 Identities=17% Similarity=0.305 Sum_probs=29.8
Q ss_pred ceEEEeeeeeccCeEEecC--CeEEEEcCCCCCCCCCCCcEEEEEEe-CCceEEEE
Q 020919 251 DLVCRAHQVVEDGYEFFAD--RQLVTIFSAPNYCGEFDNAGAMMSID-EELVCSFQ 303 (320)
Q Consensus 251 ~~iIrgH~~~~~G~~~~~~--~~vitifSa~~y~~~~~n~ga~l~i~-~~~~~~~~ 303 (320)
..++-|||+. -|.+...+ ++-+.+.|.|.|. ..|.++.+| +++++...
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v 255 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPI 255 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEE
Confidence 4567899986 45555432 5556677778774 466666665 45555443
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.00 E-value=0.29 Score=45.17 Aligned_cols=64 Identities=20% Similarity=0.186 Sum_probs=36.0
Q ss_pred eEEEecCCCCHH----------------------HHHHHHHhCCCC-CCCe-EEEeccccCCCCCcH-----HHHHHHHH
Q 020919 68 MKICGDVHGQYS----------------------DLLRLFEYGGYP-PKAN-YLFLGDYVDRGKQSL-----ETICLLLA 118 (320)
Q Consensus 68 i~ViGDIHG~~~----------------------~L~~il~~~~~~-~~~~-~vfLGD~VDRG~~s~-----evl~ll~~ 118 (320)
++-++|+||++. .+..+++..... ..+. ++..||+++..+.+. .++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 567888888753 344455544322 2333 345899998775432 33444433
Q ss_pred hhhhCCCcEEEecCCcccc
Q 020919 119 YKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 119 Lk~~~p~~v~~lrGNHE~~ 137 (320)
+ +-.+ +. ||||..
T Consensus 83 ~----g~da-~~-GNHefd 95 (264)
T cd07411 83 L----GVDA-MV-GHWEFT 95 (264)
T ss_pred h----CCeE-Ee-cccccc
Confidence 3 2233 33 999963
No 101
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.77 E-value=0.33 Score=47.76 Aligned_cols=56 Identities=25% Similarity=0.393 Sum_probs=36.8
Q ss_pred HHHHHHhCCCC-CCCeEEEeccccCCCCCc--HHHHHHHHHhhhhCCC----cEEEecCCccc
Q 020919 81 LLRLFEYGGYP-PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 136 (320)
Q Consensus 81 L~~il~~~~~~-~~~~~vfLGD~VDRG~~s--~evl~ll~~Lk~~~p~----~v~~lrGNHE~ 136 (320)
|.+.+...-+. ..+.++||||++|-|... -|--....+++..++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34445444333 345677899999988744 3444455555555554 79999999996
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=90.44 E-value=0.36 Score=53.99 Aligned_cols=65 Identities=18% Similarity=0.114 Sum_probs=40.1
Q ss_pred ceEEEecCCCCH---HHHHHHHHhCCCCCCCeEE-EeccccCCCCCc-----HHHHHHHHHhhhhCCCcEEEecCCccc
Q 020919 67 PMKICGDVHGQY---SDLLRLFEYGGYPPKANYL-FLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 67 ~i~ViGDIHG~~---~~L~~il~~~~~~~~~~~v-fLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
.++.++|+||.+ ..+..+++.......+.++ ..||+++..+.+ ..++.++-.+. --....||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 478899999885 4444555544322233343 379999987644 23445444432 33569999997
No 103
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=90.37 E-value=0.53 Score=44.00 Aligned_cols=73 Identities=22% Similarity=0.239 Sum_probs=41.9
Q ss_pred eEEEecCCCC--HHHHHHHHHhCCC--CCCCeEEEeccccCCCCCcH--H------HHHHHHHhhhhCC-CcEEEecCCc
Q 020919 68 MKICGDVHGQ--YSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGNH 134 (320)
Q Consensus 68 i~ViGDIHG~--~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~Lk~~~p-~~v~~lrGNH 134 (320)
.--.|+-.=+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+| -.++.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 3345555411 3445555554432 35677889999998775421 1 1122233444444 3699999999
Q ss_pred cccchh
Q 020919 135 ECASIN 140 (320)
Q Consensus 135 E~~~~~ 140 (320)
|....+
T Consensus 120 D~~p~~ 125 (296)
T cd00842 120 DSYPVN 125 (296)
T ss_pred CCCccc
Confidence 986543
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=90.27 E-value=0.72 Score=44.53 Aligned_cols=72 Identities=24% Similarity=0.397 Sum_probs=47.5
Q ss_pred ceEEEecCCCCHHHHHHH---HHhCCCCCCCeEEEeccccC-CCC---CcHHH---HHHH------HHhhhhCCCcEEEe
Q 020919 67 PMKICGDVHGQYSDLLRL---FEYGGYPPKANYLFLGDYVD-RGK---QSLET---ICLL------LAYKIKYPENFFLL 130 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~i---l~~~~~~~~~~~vfLGD~VD-RG~---~s~ev---l~ll------~~Lk~~~p~~v~~l 130 (320)
+|.|=|=-||.++.+-+- .++.|-.+.+.++++||+=- |.. +++.| +..+ +.=...+|---+++
T Consensus 2 rIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFI 81 (456)
T KOG2863|consen 2 RIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFI 81 (456)
T ss_pred ceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEe
Confidence 678899999999998744 45555567788999999852 221 11111 1111 22244567778899
Q ss_pred cCCccccc
Q 020919 131 RGNHECAS 138 (320)
Q Consensus 131 rGNHE~~~ 138 (320)
-||||.++
T Consensus 82 GGNHEAsn 89 (456)
T KOG2863|consen 82 GGNHEASN 89 (456)
T ss_pred cCchHHHH
Confidence 99999964
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=89.43 E-value=0.76 Score=42.90 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=37.2
Q ss_pred ceEEEecCCCCH---------------------HHHHHHHHhCCCC-CCCeEEEeccccCCCCCc-----HHHHHHHHHh
Q 020919 67 PMKICGDVHGQY---------------------SDLLRLFEYGGYP-PKANYLFLGDYVDRGKQS-----LETICLLLAY 119 (320)
Q Consensus 67 ~i~ViGDIHG~~---------------------~~L~~il~~~~~~-~~~~~vfLGD~VDRG~~s-----~evl~ll~~L 119 (320)
.++-++|+||++ ..+..+++..... ++.-++..||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 367789999875 3444555544322 233344579999876532 2333433333
Q ss_pred hhhCCCcEEEecCCcccc
Q 020919 120 KIKYPENFFLLRGNHECA 137 (320)
Q Consensus 120 k~~~p~~v~~lrGNHE~~ 137 (320)
. . .+ ...||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 2 33 445999974
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=88.39 E-value=0.91 Score=41.79 Aligned_cols=56 Identities=23% Similarity=0.135 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHhCCCCCCC-eEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCcEEEecCCccc
Q 020919 76 GQYSDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 76 G~~~~L~~il~~~~~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
|.+..+..++++......+ -++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765433333 556689999877532 34555554443 23567899996
No 107
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=88.28 E-value=0.0095 Score=57.68 Aligned_cols=193 Identities=12% Similarity=-0.095 Sum_probs=111.8
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHh----hHHHHHHHHHHHccCC
Q 020919 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF----NVRLWKAFTDCFNCLP 169 (320)
Q Consensus 94 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~LP 169 (320)
-..|+++++.+++.+.++.+.+-+..+..+-.+.-..++||+.... +++++.-.. ...+++..++-++..+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~-----~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSF-----KRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcch-----hhhheeecccccCceEEEEeccCcCccce
Confidence 4588999999999999999999999898888999999999955432 222211111 1123344566667778
Q ss_pred cEEEEcCcEEEecCCCCCCCCChHhhhcCCCCCCCCCch---hhhHhhhcCCCCCCCCcccCCCCcccccChH--HHHHH
Q 020919 170 VAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTG---LLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD--KVSEF 244 (320)
Q Consensus 170 ~~~~i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~---~~~dllWsdP~~~~~~~~~~~rg~~~~fg~~--~~~~f 244 (320)
..++.+ ++++.||+..|.......+..+.-...-...+ --..++=++-.. ...|.. ++....||.+ ..-++
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~--~~~~p~~gyDfwyqpr~ 199 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEK--PGHSPLFGYDFWYQPRH 199 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-eccccc--CCCccccccceeecccc
Confidence 887766 99999999999876544443221111000000 011111111110 011211 1122222222 22234
Q ss_pred HHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCCCCCCCcEEEEEEeCC
Q 020919 245 LKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSIDEE 297 (320)
Q Consensus 245 l~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~ 297 (320)
....+.+...+.|.-...+...+.++ .+.++.+-|.-...+.++.+.++.+
T Consensus 200 ~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 200 NVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 44555666666666654444444554 7778887787777788888888664
No 108
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.97 E-value=1.2 Score=39.34 Aligned_cols=72 Identities=13% Similarity=0.156 Sum_probs=41.1
Q ss_pred eEEEecCCCC-----HHHHHHHHHhCC-CCCCCeEEEeccccCCCCCcH-------------HHHHHHHHh--hhhCCCc
Q 020919 68 MKICGDVHGQ-----YSDLLRLFEYGG-YPPKANYLFLGDYVDRGKQSL-------------ETICLLLAY--KIKYPEN 126 (320)
Q Consensus 68 i~ViGDIHG~-----~~~L~~il~~~~-~~~~~~~vfLGD~VDRG~~s~-------------evl~ll~~L--k~~~p~~ 126 (320)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... +.+..+... ++..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5678888765 667778888777 555678999999999632221 111111111 1112258
Q ss_pred EEEecCCccccch
Q 020919 127 FFLLRGNHECASI 139 (320)
Q Consensus 127 v~~lrGNHE~~~~ 139 (320)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998655
No 109
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=86.65 E-value=2.8 Score=40.33 Aligned_cols=48 Identities=21% Similarity=0.187 Sum_probs=30.4
Q ss_pred CCCCeEEEeccccCCCCCcHHHHHHH---HHhhhhCCCcEEEecCCccccch
Q 020919 91 PPKANYLFLGDYVDRGKQSLETICLL---LAYKIKYPENFFLLRGNHECASI 139 (320)
Q Consensus 91 ~~~~~~vfLGD~VDRG~~s~evl~ll---~~Lk~~~p~~v~~lrGNHE~~~~ 139 (320)
...+.+||+||.|+. ......-..+ .+=.+.+.--...+.||||+...
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 445789999999986 4333332222 22233344468899999999643
No 110
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=85.42 E-value=1.7 Score=40.59 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=47.4
Q ss_pred ceEEEecCCCC--HHHHHHHHHhCCCCC-CCeEEEeccccCCC-CCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQ--YSDLLRLFEYGGYPP-KANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~--~~~L~~il~~~~~~~-~~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++.++|||=|. -..+...|..+.... .+-+|..||...-| .-+-++...|..+- -.++.+ |||+.-
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 58899999999 566677776655433 34555689999766 45778888887654 356666 999985
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=84.95 E-value=1.2 Score=45.35 Aligned_cols=68 Identities=25% Similarity=0.229 Sum_probs=41.7
Q ss_pred cCceEEEecCCCCHH------------HH---HHHHHhCCCCCCCe-EEEeccccCCCC------CcHHHHHHHHHhhhh
Q 020919 65 EAPMKICGDVHGQYS------------DL---LRLFEYGGYPPKAN-YLFLGDYVDRGK------QSLETICLLLAYKIK 122 (320)
Q Consensus 65 ~~~i~ViGDIHG~~~------------~L---~~il~~~~~~~~~~-~vfLGD~VDRG~------~s~evl~ll~~Lk~~ 122 (320)
+-.|+-..|+||++. -+ ..++++........ +|=.||+++..+ .....+.++-.|+
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 345788899999998 33 23333322222223 444899999843 2344566666654
Q ss_pred CCCcEEEecCCcccc
Q 020919 123 YPENFFLLRGNHECA 137 (320)
Q Consensus 123 ~p~~v~~lrGNHE~~ 137 (320)
-=....||||.-
T Consensus 104 ---yDa~tiGNHEFd 115 (517)
T COG0737 104 ---YDAMTLGNHEFD 115 (517)
T ss_pred ---CcEEeecccccc
Confidence 346788999985
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.88 E-value=2.3 Score=42.41 Aligned_cols=70 Identities=21% Similarity=0.391 Sum_probs=53.7
Q ss_pred ecCceEEEecCCCCHHHHHHHHHhCCC--CCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCc
Q 020919 64 LEAPMKICGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 134 (320)
Q Consensus 64 ~~~~i~ViGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNH 134 (320)
.+.+|.|+||+-|+++.|.+-++.... .|-+-++++|++++-..++-|++.+... ....|--++++-+|-
T Consensus 4 ~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng-~~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 4 ADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNG-TKKVPIPTYFLGDNA 75 (528)
T ss_pred CCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcC-CccCceeEEEecCCC
Confidence 357899999999999999877765443 2457788999999887778888777654 345677788888776
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.38 E-value=1.4 Score=41.40 Aligned_cols=66 Identities=18% Similarity=0.090 Sum_probs=37.5
Q ss_pred ceEEEecCCCCHH----------------HHHHHHHh-CCC-CCCCeEEEeccccCCCCCc-------HHHHHHHHHhhh
Q 020919 67 PMKICGDVHGQYS----------------DLLRLFEY-GGY-PPKANYLFLGDYVDRGKQS-------LETICLLLAYKI 121 (320)
Q Consensus 67 ~i~ViGDIHG~~~----------------~L~~il~~-~~~-~~~~~~vfLGD~VDRG~~s-------~evl~ll~~Lk~ 121 (320)
.|+-+.|+||++. .+.+.++. ... .++.-++..||.++.-+.+ .-++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 4778899999864 12222221 111 2223345589999765432 2234444444
Q ss_pred hCCCcEEEecCCcccc
Q 020919 122 KYPENFFLLRGNHECA 137 (320)
Q Consensus 122 ~~p~~v~~lrGNHE~~ 137 (320)
+--.+..||||.-
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 2456889999994
No 114
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=84.12 E-value=11 Score=33.34 Aligned_cols=85 Identities=15% Similarity=0.248 Sum_probs=64.7
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccch----------------HHHHHHhhHHH
Q 020919 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRL 157 (320)
Q Consensus 94 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 157 (320)
..+|||| .|-+.-|++.++-+|+.+|.++-++ .|+-|.+..+....|. .|..+.+-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4588999 5999999999999999888877655 8999998876544331 23334445567
Q ss_pred HHHHHHHHccCCcEEEEcCcEEEecC
Q 020919 158 WKAFTDCFNCLPVAALIDEKILCMHG 183 (320)
Q Consensus 158 ~~~~~~~f~~LP~~~~i~~~~l~vHg 183 (320)
|..+...+.++++...+-.+++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77788888888998888777887776
No 115
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=83.55 E-value=1.4 Score=41.36 Aligned_cols=65 Identities=18% Similarity=0.042 Sum_probs=35.0
Q ss_pred eEEEecCCCCHHH----------HHHHHHhCCC-----CCCCeEEEeccccCCCCCc-----HHHHHHHHHhhhhCCCcE
Q 020919 68 MKICGDVHGQYSD----------LLRLFEYGGY-----PPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENF 127 (320)
Q Consensus 68 i~ViGDIHG~~~~----------L~~il~~~~~-----~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~~v 127 (320)
|+-++|+||++.. +..+++.... .++.-++-.||.+...+.+ .-++.++-++. -.+
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~Da 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YDA 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----CcE
Confidence 6778999998533 3344443321 2333344589998433321 23344444443 233
Q ss_pred EEecCCcccc
Q 020919 128 FLLRGNHECA 137 (320)
Q Consensus 128 ~~lrGNHE~~ 137 (320)
...||||.-
T Consensus 79 -~~~GNHEfD 87 (285)
T cd07405 79 -MAVGNHEFD 87 (285)
T ss_pred -Eeecccccc
Confidence 444999964
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=82.25 E-value=2.3 Score=40.52 Aligned_cols=64 Identities=20% Similarity=0.061 Sum_probs=38.7
Q ss_pred eEEEecCCCCHH------HHHHHHHhCCC-----CCCCeEEEeccccCCCCC-------------cHHHHHHHHHhhhhC
Q 020919 68 MKICGDVHGQYS------DLLRLFEYGGY-----PPKANYLFLGDYVDRGKQ-------------SLETICLLLAYKIKY 123 (320)
Q Consensus 68 i~ViGDIHG~~~------~L~~il~~~~~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~Lk~~~ 123 (320)
|+-+.|+||++. .+..+++.... .++.-++..||.+..++. ...++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 566889999953 33334443221 233445568999876543 334455555554
Q ss_pred CCcEEEecCCccc
Q 020919 124 PENFFLLRGNHEC 136 (320)
Q Consensus 124 p~~v~~lrGNHE~ 136 (320)
-=.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 34678999996
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=81.12 E-value=2.2 Score=44.87 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=42.6
Q ss_pred ecCceEEEecCCCCHHH----------------HHHHHHhCCCC-CCCeEEEeccccCCCCCcH-------------HHH
Q 020919 64 LEAPMKICGDVHGQYSD----------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQSL-------------ETI 113 (320)
Q Consensus 64 ~~~~i~ViGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~s~-------------evl 113 (320)
..-+|+-..|+||++.. +..+++..... ++..+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34567889999999743 33344433222 3344556899998665431 245
Q ss_pred HHHHHhhhhCCCcEEEecCCcccc
Q 020919 114 CLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 114 ~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
..+-.|. --....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 5555553 456889999963
No 118
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=80.98 E-value=3.7 Score=38.00 Aligned_cols=66 Identities=15% Similarity=0.151 Sum_probs=43.4
Q ss_pred ceEEEecCCCCHH--HHHHHHHhCCCC-CCCeEEEeccccCCC-CCcHHHHHHHHHhhhhCCCcEEEecCCcccc
Q 020919 67 PMKICGDVHGQYS--DLLRLFEYGGYP-PKANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 67 ~i~ViGDIHG~~~--~L~~il~~~~~~-~~~~~vfLGD~VDRG-~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++.+||||=|.-- .+...|...... +.+-+|-.||..--| .-+-++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 5789999999853 345555544322 234455579998766 467788888877643 45444 999864
No 119
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=80.27 E-value=2.3 Score=44.46 Aligned_cols=66 Identities=17% Similarity=0.073 Sum_probs=39.8
Q ss_pred ceEEEecCCCCHHH----------------HHHHHHhCCCC-CCCeEEEeccccCCCCCc-------------HHHHHHH
Q 020919 67 PMKICGDVHGQYSD----------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQS-------------LETICLL 116 (320)
Q Consensus 67 ~i~ViGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~s-------------~evl~ll 116 (320)
+|+-..|+||++.. +..++++.... ++.-+|-.||.+...+.+ .-++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 57778999999753 33344443222 234455689999865433 2344555
Q ss_pred HHhhhhCCCcEEEecCCcccc
Q 020919 117 LAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 117 ~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
-.|. --....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 4443 345889999963
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=79.43 E-value=2.4 Score=47.53 Aligned_cols=66 Identities=21% Similarity=0.173 Sum_probs=38.8
Q ss_pred CceEEEecCCCCHHH----------------HHHHHHhCCCCCCCeEE-EeccccCCCCC--------------cHHHHH
Q 020919 66 APMKICGDVHGQYSD----------------LLRLFEYGGYPPKANYL-FLGDYVDRGKQ--------------SLETIC 114 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~----------------L~~il~~~~~~~~~~~v-fLGD~VDRG~~--------------s~evl~ 114 (320)
-.|+-++|+||++.. +..+++.........++ -.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 358889999998643 33444443322223344 48999986652 123444
Q ss_pred HHHHhhhhCCCcEEEecCCccc
Q 020919 115 LLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 115 ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
.+-.|. --....||||.
T Consensus 122 ~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHhhcC-----ccEEeeccccc
Confidence 444432 34577999997
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=78.43 E-value=1.6 Score=43.44 Aligned_cols=41 Identities=24% Similarity=0.382 Sum_probs=33.9
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccch
Q 020919 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 139 (320)
Q Consensus 94 ~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~ 139 (320)
+++=.+||+-||||++-.+++-|..+ ..+-+-.||||-..+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 45667999999999999999998775 367788999997554
No 122
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=74.33 E-value=6.5 Score=34.67 Aligned_cols=74 Identities=19% Similarity=0.271 Sum_probs=42.0
Q ss_pred CCCCeEEEecccc--CCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHHHHhhHHHHHHHHHHHccC
Q 020919 91 PPKANYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCL 168 (320)
Q Consensus 91 ~~~~~~vfLGD~V--DRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~L 168 (320)
.+++.++.-||+- -|=++..+=+.++-+ -|+.=+++|||||.+.-.. ..+...+... ....++.|+.+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEe
Confidence 3455566679984 234444555555554 4888999999999875421 1222222222 33456666666
Q ss_pred CcEEEEc
Q 020919 169 PVAALID 175 (320)
Q Consensus 169 P~~~~i~ 175 (320)
..+ +++
T Consensus 112 n~a-I~G 117 (230)
T COG1768 112 NYA-IVG 117 (230)
T ss_pred eEE-EEE
Confidence 633 444
No 123
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=73.03 E-value=5.3 Score=43.04 Aligned_cols=67 Identities=19% Similarity=0.093 Sum_probs=40.2
Q ss_pred CceEEEecCCCCHHHH----------------HHHHHhCCCC-CCCeEEEeccccCCCCCc--------------HHHHH
Q 020919 66 APMKICGDVHGQYSDL----------------LRLFEYGGYP-PKANYLFLGDYVDRGKQS--------------LETIC 114 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~L----------------~~il~~~~~~-~~~~~vfLGD~VDRG~~s--------------~evl~ 114 (320)
-+|+-..|+||++... ..+++..... ++.-+|-.||++..-+.. .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 3578899999996432 2233333211 234455689999765432 12555
Q ss_pred HHHHhhhhCCCcEEEecCCcccc
Q 020919 115 LLLAYKIKYPENFFLLRGNHECA 137 (320)
Q Consensus 115 ll~~Lk~~~p~~v~~lrGNHE~~ 137 (320)
++-.|. --....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 555553 356889999963
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=73.03 E-value=13 Score=35.12 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=48.5
Q ss_pred CceEEEecCCCC----HHHHHHHHHhCC-CCC----CCeEEEeccccCCC----CCc----HHHHHHHHHh-hhhCC---
Q 020919 66 APMKICGDVHGQ----YSDLLRLFEYGG-YPP----KANYLFLGDYVDRG----KQS----LETICLLLAY-KIKYP--- 124 (320)
Q Consensus 66 ~~i~ViGDIHG~----~~~L~~il~~~~-~~~----~~~~vfLGD~VDRG----~~s----~evl~ll~~L-k~~~p--- 124 (320)
..++|+||+|=+ ++.|.++|+... ..+ ..-+|++|+++-+. ..+ .|-++-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 358999999955 778888888662 212 34689999999763 222 2334444432 33455
Q ss_pred --CcEEEecCCccccc
Q 020919 125 --ENFFLLRGNHECAS 138 (320)
Q Consensus 125 --~~v~~lrGNHE~~~ 138 (320)
.++++|.|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 68999999999753
No 125
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=68.67 E-value=8.8 Score=37.83 Aligned_cols=71 Identities=10% Similarity=0.026 Sum_probs=39.9
Q ss_pred ceEEEecCCCCHHHHHH---HHHhC-CCCCCCeEEEeccccCCCCCcHH------HHHHHHHhhh-hCCCcEEEecCCcc
Q 020919 67 PMKICGDVHGQYSDLLR---LFEYG-GYPPKANYLFLGDYVDRGKQSLE------TICLLLAYKI-KYPENFFLLRGNHE 135 (320)
Q Consensus 67 ~i~ViGDIHG~~~~L~~---il~~~-~~~~~~~~vfLGD~VDRG~~s~e------vl~ll~~Lk~-~~p~~v~~lrGNHE 135 (320)
+++++||-=+-...-.. .+... ...+.+-+|-+||-++.|..++. .++-++.-.. .-.-.++++.||||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHD 107 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQAD 107 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccc
Confidence 58999995432222212 22222 12344557779999988877543 3344432111 01236999999999
Q ss_pred cc
Q 020919 136 CA 137 (320)
Q Consensus 136 ~~ 137 (320)
..
T Consensus 108 y~ 109 (394)
T PTZ00422 108 WD 109 (394)
T ss_pred cc
Confidence 73
No 126
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=67.96 E-value=7.5 Score=36.43 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=56.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeee--c-------CceEEEecCCCCHHHHHHHHHhCCCCCCCeEEEeccccCCCCC
Q 020919 38 QLSESEIKQLCVASRDIFMRQPNLLEL--E-------APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ 108 (320)
Q Consensus 38 ~~~~~~~~~l~~~~~~il~~ep~~l~~--~-------~~i~ViGDIHG~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~ 108 (320)
+++.+...+..+-++.-=.=+|++-.+ + .+.+.|+|-|....+.. ..++.|-++-+||+-.-|.
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 456666555555444444444533332 2 35899999999665532 3566677788999977664
Q ss_pred cHHHHHHHHHhhhhCC-CcEEEecCCccccch
Q 020919 109 SLETICLLLAYKIKYP-ENFFLLRGNHECASI 139 (320)
Q Consensus 109 s~evl~ll~~Lk~~~p-~~v~~lrGNHE~~~~ 139 (320)
+-||..+=..+ -..| .+=+.|+||||.-.-
T Consensus 98 ~~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 98 PEEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred HHHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 45555443222 2233 345789999998643
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=67.71 E-value=7.6 Score=39.85 Aligned_cols=67 Identities=18% Similarity=0.053 Sum_probs=36.1
Q ss_pred CceEEEecCCCCHHH----------HHHHHHhCC-----CCCCCeEEEeccccCCCCCc-----HHHHHHHHHhhhhCCC
Q 020919 66 APMKICGDVHGQYSD----------LLRLFEYGG-----YPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPE 125 (320)
Q Consensus 66 ~~i~ViGDIHG~~~~----------L~~il~~~~-----~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk~~~p~ 125 (320)
-.|+-+.|+||++.. +..+++... ..++.-++.-||.+...+.+ .-++.++-.+. -
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~ 110 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----Y 110 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----C
Confidence 347889999998742 223343322 12334455679998643322 12334444332 2
Q ss_pred cEEEecCCcccc
Q 020919 126 NFFLLRGNHECA 137 (320)
Q Consensus 126 ~v~~lrGNHE~~ 137 (320)
.+ ...||||.-
T Consensus 111 Da-~tlGNHEFD 121 (551)
T PRK09558 111 DA-MAVGNHEFD 121 (551)
T ss_pred CE-EcccccccC
Confidence 34 445999974
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=66.51 E-value=9.3 Score=39.29 Aligned_cols=65 Identities=22% Similarity=0.082 Sum_probs=37.3
Q ss_pred eEEEecCCCCHHH---------------------HHHHHHhCCC-CCCCeEEEeccccCCCCCc-----HHHHHHHHHhh
Q 020919 68 MKICGDVHGQYSD---------------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQS-----LETICLLLAYK 120 (320)
Q Consensus 68 i~ViGDIHG~~~~---------------------L~~il~~~~~-~~~~~~vfLGD~VDRG~~s-----~evl~ll~~Lk 120 (320)
++-+.|+||++.. +..+++.... .++.-++.-||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5567888887643 3333433221 2334456689999765433 22344444443
Q ss_pred hhCCCcEEEecCCcccc
Q 020919 121 IKYPENFFLLRGNHECA 137 (320)
Q Consensus 121 ~~~p~~v~~lrGNHE~~ 137 (320)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 457889999963
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=61.11 E-value=12 Score=40.28 Aligned_cols=67 Identities=16% Similarity=0.083 Sum_probs=39.6
Q ss_pred cCceEEEecCCCCHHH----------------HHHHHHhCCCC-CCCeEEEeccccCCCCCc------------------
Q 020919 65 EAPMKICGDVHGQYSD----------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQS------------------ 109 (320)
Q Consensus 65 ~~~i~ViGDIHG~~~~----------------L~~il~~~~~~-~~~~~vfLGD~VDRG~~s------------------ 109 (320)
.-+|+-..|+||++.. +..++++.... ++..+|-.||++...+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4468889999999632 23334333211 334455689998543321
Q ss_pred -HHHHHHHHHhhhhCCCcEEEecCCccc
Q 020919 110 -LETICLLLAYKIKYPENFFLLRGNHEC 136 (320)
Q Consensus 110 -~evl~ll~~Lk~~~p~~v~~lrGNHE~ 136 (320)
.-++.++-.|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23555555543 34688999995
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=55.59 E-value=36 Score=34.96 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=38.6
Q ss_pred CceEEEecCCC------------CHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHH
Q 020919 66 APMKICGDVHG------------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLL 117 (320)
Q Consensus 66 ~~i~ViGDIHG------------~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~ 117 (320)
-+|.|-.|.|= .+..|.++|..+.-...+-++.=||+++-..-|..+|-...
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHH
Confidence 36888899883 47889999998776666666677999987777766654433
No 131
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=53.69 E-value=48 Score=24.87 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=48.0
Q ss_pred eeecCceEEEecCCCCHHHHHHHHHhCCC--CCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCc
Q 020919 62 LELEAPMKICGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 134 (320)
Q Consensus 62 l~~~~~i~ViGDIHG~~~~L~~il~~~~~--~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNH 134 (320)
+.....+.||=|---|.+.+.++++.+.. +....++.+|+.-|+|....+....+..+...+...+++...|+
T Consensus 8 v~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 8 VREPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred EeeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 33344677888877788888888876532 34556778999999888887766666666555566666655554
No 132
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=50.49 E-value=10 Score=31.56 Aligned_cols=86 Identities=26% Similarity=0.427 Sum_probs=48.6
Q ss_pred cCCCCHHHHHHHHHhCCCCCCCeE--EEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccchhhhccchHHHH
Q 020919 73 DVHGQYSDLLRLFEYGGYPPKANY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 150 (320)
Q Consensus 73 DIHG~~~~L~~il~~~~~~~~~~~--vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~ 150 (320)
||.|++..|++.|..+++|..-.+ +-.|| +-..+.++-.+-..|+..|.-.. +...+.......
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999844322 23444 33333333222233443322111 111222222333
Q ss_pred HHhhHHHHHHHHHHHccCCcEE
Q 020919 151 RRFNVRLWKAFTDCFNCLPVAA 172 (320)
Q Consensus 151 ~~~~~~~~~~~~~~f~~LP~~~ 172 (320)
.++.+.+|+.+.+-|.+-|...
T Consensus 67 ~RF~E~vyk~LRdef~YkP~lT 88 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSLT 88 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC
Confidence 4566778888888888888653
No 133
>PF14164 YqzH: YqzH-like protein
Probab=48.26 E-value=74 Score=23.10 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=34.9
Q ss_pred CChhhHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 020919 13 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPN 60 (320)
Q Consensus 13 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~ 60 (320)
|++.-|+++|.+-++.-. ....-.+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg-~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYG-YDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 556667777777666542 22344589999999999999999999886
No 134
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=46.91 E-value=36 Score=34.14 Aligned_cols=72 Identities=22% Similarity=0.132 Sum_probs=41.0
Q ss_pred cCceEEEecCCCCHHH--HHHHHHhCCCCCCCeEEEeccccC-CCCCc---HHHHHHHHHhhhhCCCcEEEecCCccccc
Q 020919 65 EAPMKICGDVHGQYSD--LLRLFEYGGYPPKANYLFLGDYVD-RGKQS---LETICLLLAYKIKYPENFFLLRGNHECAS 138 (320)
Q Consensus 65 ~~~i~ViGDIHG~~~~--L~~il~~~~~~~~~~~vfLGD~VD-RG~~s---~evl~ll~~Lk~~~p~~v~~lrGNHE~~~ 138 (320)
+.++.|+||+==.... .+....... ..+-++++||+.- .+..+ -+-...+..+...-| ..+.-||||.-.
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~~--k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEENL--KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred ceeEEEEccccccccccchHhHHhccc--CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 4468999998443333 223333222 3566888999983 22221 233333333333334 678899999976
Q ss_pred hh
Q 020919 139 IN 140 (320)
Q Consensus 139 ~~ 140 (320)
.+
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 64
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=41.62 E-value=24 Score=36.70 Aligned_cols=40 Identities=25% Similarity=0.413 Sum_probs=34.3
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCccccch
Q 020919 95 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 139 (320)
Q Consensus 95 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNHE~~~~ 139 (320)
++-.+||+.||||.+-.+++.|+.. .+|=+-.||||-..|
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 4667999999999999999999875 378899999997554
No 136
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=40.35 E-value=1.5e+02 Score=25.39 Aligned_cols=109 Identities=14% Similarity=0.222 Sum_probs=64.8
Q ss_pred eEEEecCCCCHHHHHHHHH-hCCC------------CCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecCCc
Q 020919 68 MKICGDVHGQYSDLLRLFE-YGGY------------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 134 (320)
Q Consensus 68 i~ViGDIHG~~~~L~~il~-~~~~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrGNH 134 (320)
+++.+=.+||-..+.+.+. .++. ....++||+|=.+|+|.-+-++..+|-.|+ +.+|++.-
T Consensus 1 lIvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~--- 74 (160)
T PF12641_consen 1 LIVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG--- 74 (160)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE---
Confidence 3566777888887766553 2222 123579999999999999999999988764 34544321
Q ss_pred cccchhhhccchHHHHHHhhHHHHHHHHHHHccCCcEEEEcCcEEEecCCCCCCCCChHhhhc
Q 020919 135 ECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRN 197 (320)
Q Consensus 135 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~~l~vHgGi~p~~~~l~~i~~ 197 (320)
..|+.. ...+...+.+....++..= ..+- +.|+|+|-++|.+ ++..+.
T Consensus 75 -------T~G~~~--~s~~~~~~~~~~~~~~~~~---~~~l-g~f~CqGk~~~~~--~e~~~~ 122 (160)
T PF12641_consen 75 -------TAGAGP--DSEYAKKILKNVEALLPKG---NEIL-GTFMCQGKMDPKV--IEKYKK 122 (160)
T ss_pred -------ecCCCC--chHHHHHHHHHHHHhhccC---Ceec-ceEEeCCcCCHHH--HHHHHh
Confidence 122221 1223334444444444332 2332 4788899998865 444443
No 137
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=32.73 E-value=1.6e+02 Score=29.20 Aligned_cols=67 Identities=10% Similarity=0.043 Sum_probs=47.4
Q ss_pred cCceEEEecCCC-CHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhC-CCcEEEecC
Q 020919 65 EAPMKICGDVHG-QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 132 (320)
Q Consensus 65 ~~~i~ViGDIHG-~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~-p~~v~~lrG 132 (320)
...+.||=|-|+ |.+.+.+.|+.+...+..+++.+||+.+.|+.+.+.-.-+..+.... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 345788999555 67888888776543344678899999999999998877776554433 3555544 5
No 138
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=29.50 E-value=3.9e+02 Score=23.44 Aligned_cols=78 Identities=19% Similarity=0.200 Sum_probs=58.3
Q ss_pred cccCCHHHHHHHHHHHHHHHhhCCCeeeecCceEEEecCCCCHHHHHHHHHhCCCCC-----------------------
Q 020919 36 QVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPP----------------------- 92 (320)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~ViGDIHG~~~~L~~il~~~~~~~----------------------- 92 (320)
.+-++++++.+-+.+..+.+.++..= ...++||=++|++--+-.++..+.++.
T Consensus 9 evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~ 84 (178)
T COG0634 9 EVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKIL 84 (178)
T ss_pred eEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEe
Confidence 45689999999999988888776542 678899999999887777777655431
Q ss_pred --------CCeEEEeccccCCCCCcHHHHHHHH
Q 020919 93 --------KANYLFLGDYVDRGKQSLETICLLL 117 (320)
Q Consensus 93 --------~~~~vfLGD~VDRG~~s~evl~ll~ 117 (320)
..+++.+=|++|-|.---.+..++.
T Consensus 85 kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 85 KDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 2368889999998875555555543
No 139
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=28.71 E-value=43 Score=31.23 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=23.6
Q ss_pred eEEEeccccCCCCCcHHHH-HHHHHhhhhCCCcEEEecC
Q 020919 95 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRG 132 (320)
Q Consensus 95 ~~vfLGD~VDRG~~s~evl-~ll~~Lk~~~p~~v~~lrG 132 (320)
+++|+||+|.+ ...+++ ..|-.||.+++..+.+.-|
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIaNg 38 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIANG 38 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 58999999954 334433 4566777777766555544
No 140
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=28.18 E-value=1.1e+02 Score=28.16 Aligned_cols=38 Identities=21% Similarity=0.433 Sum_probs=31.2
Q ss_pred ChHHHHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcC
Q 020919 237 GPDKVSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFS 277 (320)
Q Consensus 237 g~~~~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifS 277 (320)
....+-+||+.+|.. .-+|++.+||.|++++-+|+||-
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~r 176 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFR 176 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEE
Confidence 466788999999954 47899999999999887787764
No 141
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=27.69 E-value=1.7e+02 Score=22.94 Aligned_cols=44 Identities=16% Similarity=0.480 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 020919 78 YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 130 (320)
Q Consensus 78 ~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~l 130 (320)
...+.++++ .-|+.++|++|| -|..-.|+..-+. ..+|++|..+
T Consensus 52 ~~~i~~i~~---~fP~~kfiLIGD---sgq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 52 RDNIERILR---DFPERKFILIGD---SGQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHHHHHHHH---HCCCCcEEEEee---CCCcCHHHHHHHH---HHCCCCEEEE
Confidence 344555665 456788999998 4777788887664 4689887654
No 142
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=27.14 E-value=96 Score=31.40 Aligned_cols=56 Identities=25% Similarity=0.376 Sum_probs=39.7
Q ss_pred hHHHHHHHHHcCCc----eEEEeeeeecc--CeE-EecCCeEEEE---cCCCCCCCCCCCcEEEEEE
Q 020919 238 PDKVSEFLKRHDLD----LVCRAHQVVED--GYE-FFADRQLVTI---FSAPNYCGEFDNAGAMMSI 294 (320)
Q Consensus 238 ~~~~~~fl~~~~~~----~iIrgH~~~~~--G~~-~~~~~~viti---fSa~~y~~~~~n~ga~l~i 294 (320)
++..++.|+..|++ .||-||+|+.+ |-. +-++|++|-| ||- .|....+=+|--|..
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFsk-AYqs~TgiAGYTllY 580 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSK-AYQSTTGIAGYTLLY 580 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhh-hhhcccccceeEeee
Confidence 55678899999987 89999999874 433 3478999988 443 366555555655544
No 143
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=25.29 E-value=64 Score=29.85 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=25.2
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHhhhhCCCcEEEecC
Q 020919 95 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 132 (320)
Q Consensus 95 ~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p~~v~~lrG 132 (320)
+++|+||+|.+.-.. -+-..|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 478999999875422 3445677778778766665544
No 144
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=24.82 E-value=1e+02 Score=27.64 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.4
Q ss_pred ccChHHHHHHHHHcCCceEEEeeeeeccC
Q 020919 235 TFGPDKVSEFLKRHDLDLVCRAHQVVEDG 263 (320)
Q Consensus 235 ~fg~~~~~~fl~~~~~~~iIrgH~~~~~G 263 (320)
.+|...+.+++++.+++++|.||.-...+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 57888999999999999999999987654
No 145
>PLN02965 Probable pheophorbidase
Probab=23.87 E-value=1.5e+02 Score=26.36 Aligned_cols=21 Identities=10% Similarity=0.172 Sum_probs=17.3
Q ss_pred HHHHHHHHHcCC--ceEEEeeee
Q 020919 239 DKVSEFLKRHDL--DLVCRAHQV 259 (320)
Q Consensus 239 ~~~~~fl~~~~~--~~iIrgH~~ 259 (320)
+.+.++++..+. +.++.||..
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447889999875 799999986
No 146
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=23.65 E-value=65 Score=29.71 Aligned_cols=58 Identities=26% Similarity=0.375 Sum_probs=32.7
Q ss_pred CCcEEEecCCccccchhhhccchHHHH-HHh-hHHHHHHHHHHHccCCcEEEEc-CcEEEecCCCCCC
Q 020919 124 PENFFLLRGNHECASINRIYGFYDECK-RRF-NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPD 188 (320)
Q Consensus 124 p~~v~~lrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~~~~~f~~LP~~~~i~-~~~l~vHgGi~p~ 188 (320)
..+|++|-||||.- .++.|. .... .+. ..+.| +.+..+|++---. .+++..|-||..+
T Consensus 127 nknvvvlagnhein-~ngny~--arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEIN-FNGNYM--ARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceec-cCchHH--HHHhhCCCCccchh----hccccccccccCcchhhhhcccCceec
Confidence 36899999999985 333331 1111 111 12333 3356778774432 2688888888643
No 147
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.52 E-value=49 Score=31.85 Aligned_cols=61 Identities=21% Similarity=0.386 Sum_probs=40.9
Q ss_pred HHHhhCCCeeeecCceEEEecCC-CCHHHHHHHHHhCCCCCCCeEEE-eccccC--CCCCcHHHHHHHHHhhh
Q 020919 53 DIFMRQPNLLELEAPMKICGDVH-GQYSDLLRLFEYGGYPPKANYLF-LGDYVD--RGKQSLETICLLLAYKI 121 (320)
Q Consensus 53 ~il~~ep~~l~~~~~i~ViGDIH-G~~~~L~~il~~~~~~~~~~~vf-LGD~VD--RG~~s~evl~ll~~Lk~ 121 (320)
+-+++-|..++-.+.+.|+||.| |||.++.. .+..++| +-|+=. -|+.-..++.+..+|..
T Consensus 44 ~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 44 QDMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 34566777788888899999999 77776532 1223444 555421 36778888888877753
No 148
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=23.19 E-value=6.2e+02 Score=23.64 Aligned_cols=19 Identities=26% Similarity=0.139 Sum_probs=14.9
Q ss_pred EEecCCccccchhhhccch
Q 020919 128 FLLRGNHECASINRIYGFY 146 (320)
Q Consensus 128 ~~lrGNHE~~~~~~~~gf~ 146 (320)
...|.||-...+|+.+.+.
T Consensus 125 ~~~R~Na~G~DLNRD~~~~ 143 (268)
T cd06244 125 AGTRENANGFDLNRDNSFQ 143 (268)
T ss_pred eeeecCCCccccCCCCCcc
Confidence 3469999998899887654
No 149
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=23.15 E-value=1.6e+02 Score=26.48 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=28.8
Q ss_pred HHHHHHHcCCceEEEeeeeeccCeEEecCCeEEEEcCCCCCC
Q 020919 241 VSEFLKRHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYC 282 (320)
Q Consensus 241 ~~~fl~~~~~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~ 282 (320)
+.+.|-..|++.||-||.-+..+++... +++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~~-~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIYK-GKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEEC-CEEE-EEcccccc
Confidence 4444444799999999999888998764 5555 67765553
No 150
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=20.16 E-value=3.6e+02 Score=26.32 Aligned_cols=66 Identities=18% Similarity=0.200 Sum_probs=44.4
Q ss_pred cCceEEEecCC-CCHHHHHHHHHhCCCCCCCeEEEeccccCCCCCcHHHHHHHHHhhhhCC-CcEEEe
Q 020919 65 EAPMKICGDVH-GQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLL 130 (320)
Q Consensus 65 ~~~i~ViGDIH-G~~~~L~~il~~~~~~~~~~~vfLGD~VDRG~~s~evl~ll~~Lk~~~p-~~v~~l 130 (320)
..++.||=|-+ .|.+.+.++|+.+...+...++.+|+..+-|..+.+.-..+......+. +.+++.
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~ 362 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV 362 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 34578888855 4889998888866533345678899998888888766655554433344 555554
Done!