Query 020923
Match_columns 319
No_of_seqs 149 out of 1328
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:13:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020923.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020923hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02845 Branched-chain-amino- 100.0 2.2E-70 4.7E-75 514.9 35.8 314 3-319 19-335 (336)
2 PRK12479 branched-chain amino 100.0 2.8E-63 6.2E-68 460.9 32.6 278 28-311 6-289 (299)
3 TIGR01122 ilvE_I branched-chai 100.0 3.8E-62 8.2E-67 453.5 32.5 273 29-307 1-285 (298)
4 PRK08320 branched-chain amino 100.0 4.3E-62 9.4E-67 451.0 32.6 275 27-307 4-284 (288)
5 PRK06680 D-amino acid aminotra 100.0 1.5E-61 3.3E-66 446.8 32.3 274 27-308 4-283 (286)
6 PRK07650 4-amino-4-deoxychoris 100.0 1.9E-61 4.2E-66 445.6 32.6 274 28-308 2-277 (283)
7 cd01558 D-AAT_like D-Alanine a 100.0 1.4E-61 3.1E-66 443.6 31.2 266 29-302 1-270 (270)
8 PRK12400 D-amino acid aminotra 100.0 5.8E-61 1.2E-65 443.8 32.8 274 27-309 6-285 (290)
9 PRK06606 branched-chain amino 100.0 7.6E-61 1.7E-65 446.1 32.1 273 28-307 9-293 (306)
10 PRK13356 aminotransferase; Pro 100.0 2E-60 4.3E-65 439.4 32.8 272 27-309 8-285 (286)
11 TIGR01121 D_amino_aminoT D-ami 100.0 2.1E-60 4.5E-65 437.2 32.3 269 28-305 2-274 (276)
12 PRK07544 branched-chain amino 100.0 5.9E-60 1.3E-64 437.5 30.9 270 28-307 11-287 (292)
13 PRK07849 4-amino-4-deoxychoris 100.0 9.6E-59 2.1E-63 429.0 32.1 265 27-308 8-290 (292)
14 PLN03117 Branched-chain-amino- 100.0 1.8E-58 4E-63 436.8 30.5 288 4-311 30-340 (355)
15 PRK06092 4-amino-4-deoxychoris 100.0 3.1E-58 6.6E-63 421.2 30.9 260 28-303 2-266 (268)
16 PLN02782 Branched-chain amino 100.0 4E-58 8.7E-63 438.8 30.9 289 4-311 80-392 (403)
17 PRK13357 branched-chain amino 100.0 5.7E-58 1.2E-62 434.1 30.2 284 5-307 28-342 (356)
18 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 1.4E-57 2.9E-62 414.0 31.3 251 46-302 1-256 (256)
19 cd01559 ADCL_like ADCL_like: 4 100.0 1.4E-57 3E-62 412.6 29.7 247 46-302 1-249 (249)
20 TIGR01123 ilvE_II branched-cha 100.0 2.3E-57 5E-62 424.0 31.9 269 29-307 1-300 (313)
21 TIGR03461 pabC_Proteo aminodeo 100.0 2.3E-57 5E-62 413.9 30.6 255 29-299 1-260 (261)
22 cd01557 BCAT_beta_family BCAT_ 100.0 6.4E-57 1.4E-61 414.5 31.2 256 41-305 1-276 (279)
23 PRK09266 hypothetical protein; 100.0 1.5E-56 3.3E-61 409.6 29.9 259 25-304 2-260 (266)
24 PLN02259 branched-chain-amino- 100.0 2E-56 4.3E-61 425.3 29.1 287 4-311 66-377 (388)
25 PLN02883 Branched-chain amino 100.0 1.6E-54 3.5E-59 411.3 29.4 288 4-311 62-373 (384)
26 COG0115 IlvE Branched-chain am 100.0 1.2E-52 2.7E-57 387.0 32.0 271 28-309 4-282 (284)
27 KOG0975 Branched chain aminotr 100.0 2.4E-46 5.2E-51 342.4 24.0 287 4-310 55-370 (379)
28 PF01063 Aminotran_4: Aminotra 100.0 8.9E-45 1.9E-49 324.6 21.0 224 67-302 1-231 (231)
29 PRK07546 hypothetical protein; 100.0 1.7E-43 3.7E-48 312.4 24.4 202 53-281 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 3.3E-35 7.1E-40 254.7 19.9 184 53-275 3-187 (187)
31 KOG2708 Predicted metalloprote 45.8 12 0.00027 33.4 1.6 39 214-260 29-71 (336)
32 KOG0378 40S ribosomal protein 32.2 1.2E+02 0.0025 27.4 5.5 45 186-230 202-249 (263)
33 PF08222 HTH_CodY: CodY helix- 30.0 83 0.0018 21.8 3.3 26 227-255 14-39 (61)
34 COG1935 Uncharacterized conser 24.7 73 0.0016 25.2 2.6 44 225-273 5-52 (122)
35 PF03804 DUF325: Viral domain 24.7 1.1E+02 0.0024 21.5 3.2 33 66-101 15-56 (71)
36 PRK13674 putative GTP cyclohyd 23.7 1.9E+02 0.0041 26.6 5.6 45 70-115 63-107 (271)
37 cd05569 PTS_IIB_fructose PTS_I 23.4 2.6E+02 0.0057 21.0 5.5 47 233-286 20-75 (96)
38 PF09954 DUF2188: Uncharacteri 23.3 1.5E+02 0.0032 20.3 3.8 25 179-203 35-59 (62)
39 cd03079 GST_N_Metaxin2 GST_N f 22.0 1.8E+02 0.0038 21.0 4.1 67 216-298 2-71 (74)
40 cd03038 GST_N_etherase_LigE GS 21.8 3E+02 0.0065 19.5 5.8 52 245-301 30-82 (84)
No 1
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=2.2e-70 Score=514.89 Aligned_cols=314 Identities=68% Similarity=1.110 Sum_probs=281.5
Q ss_pred HHHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHH
Q 020923 3 VKAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASM 82 (319)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~ 82 (319)
.+|+||++++.+ ...++++.+||.+|+||++++.+++.|+++||||+||||+|||+|+++|++++|++|++||.+||+.
T Consensus 19 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~~G~~~~le~Hl~RL~~Sa~~ 97 (336)
T PLN02845 19 AEMIQRLQSKWS-DAKKQNFGAMYSSVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIRDGHLYELDAHLDRFLRSAAK 97 (336)
T ss_pred HHHHHHHHhhhc-cccccceeeeeeEEECCEEccHHHCcccccccceeecceEEEEEEEECCEEcCHHHHHHHHHHHHHh
Confidence 479999999555 3334599999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcc-cCCCcEEEEeeeecC
Q 020923 83 AKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF-VSKGVKVITSSIPIK 161 (319)
Q Consensus 83 l~i~~p~~~~~l~~~i~~l~~~~~~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~l~~~~~~~~ 161 (319)
|+|+.|++.++|++.+.+++++++..++++|+++++|.+.+++.+..+..|++++...|.+... ..+|+++.++++.+.
T Consensus 98 L~i~~p~~~~~l~~~i~~~i~~~~~~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~gv~l~~~~~~~~ 177 (336)
T PLN02845 98 AKIPLPFDRATLRRILLQTVAASGCRNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDTYAQDRPEGVKVVTSSVPIK 177 (336)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCCcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEccccccccccCCeEEEEeeeeec
Confidence 9999889999999999999999888889999999999877776655556788887776644222 257899988877766
Q ss_pred CCCCCCccccccHHHHHHHHHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCCCCcccHHHHHHHHHHHhh
Q 020923 162 PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILSGCTAKRVLTLAKAL 241 (319)
Q Consensus 162 ~~~~~~~Kt~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~~iL~GitR~~vl~~~~~~ 241 (319)
++.++++||+||+.+++|+++|+++|+||+||+|++|+|+||+++||||+.++++|+||+++++|+||||+.||++|+++
T Consensus 178 ~~~~~~~Kt~nyl~~vla~~eA~~~G~deaLlln~~G~V~Egt~sNiF~v~~~~~l~TP~l~~iL~GItR~~vlela~~~ 257 (336)
T PLN02845 178 PPQFATVKSVNYLPNALSQMEAEERGAFAGIWLDEEGFVAEGPNMNVAFLTNDGELVLPPFDKILSGCTARRVLELAPRL 257 (336)
T ss_pred CCccccchhhhhHHHHHHHHHHHHcCCCEEEEECCCCcEEEcCcceEEEEEECCEEEeCCCCCcCccHHHHHHHHHHHhh
Confidence 66678999999999999999999999999999999999999999999666569999999988899999999999999875
Q ss_pred hhCC--ccceEEEEeeCHHHHhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHcCCCCCcccCCC
Q 020923 242 VREG--KLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSGPPTVRVAVPY 319 (319)
Q Consensus 242 ~~~g--~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~~~~~~~~~~~~ 319 (319)
...| + +|+|+.++++||.+|||+|+|||++||+||++||++.+++|++||+|++|++.|++...++...++.|++|
T Consensus 258 ~~~G~~i--~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~id~~~~~~g~~gp~t~~L~~~~~~~~~~~~~~~~~~~~~ 335 (336)
T PLN02845 258 VSPGDLR--GVKQRKISVEEAKAADEMMLIGSGVPVLPIVSWDGQPIGDGKVGPITLALHDLLLDDMRSGPPGVRTPVPY 335 (336)
T ss_pred hccCCce--EEEEEecCHHHHhcCCEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHhcCCCccceeccC
Confidence 2226 6 99999999999999999999999999999999999999988999999999999998888887777799998
No 2
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.8e-63 Score=460.95 Aligned_cols=278 Identities=27% Similarity=0.436 Sum_probs=252.8
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
+|+||++++.+.+.++++||||+||||||||+++++|++++|++|++||.+||++++|+.|++.+++.+.+.+++++++.
T Consensus 6 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i~~~~~ 85 (299)
T PRK12479 6 IYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSYGGNVFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQTLQKNEY 85 (299)
T ss_pred EEECCEEeEHHHCccccccchhheeeeEEEEEEEECCEecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 69999999999999999999999999999999999999999999999999999999999899999999999999998887
Q ss_pred CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC---cccCCCcEEEEeeeecCC-CCC-CCccccccHHHHHHHHH
Q 020923 108 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS---PFVSKGVKVITSSIPIKP-PQF-GTVKSVNYLPNVLSKME 182 (319)
Q Consensus 108 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~-~~~-~~~Kt~ny~~~~~a~~~ 182 (319)
.+++||+++++|.+.+++.+.....|++++++.|.+. ..+.+|+++.++++.+.. +.+ +.+|+.||+.+++++++
T Consensus 86 ~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~~~r~~~~~~~~~~K~~nyl~~vla~~e 165 (299)
T PRK12479 86 ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDNGLSVVSVASRRNTPDALDPRIKSMNYLNNVLVKIE 165 (299)
T ss_pred CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhCCeEEEEEeEeccCCCccCccchhhhhHHHHHHHHH
Confidence 8899999999998888877666567888888877542 224679998888777643 233 78999999999999999
Q ss_pred HHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHh
Q 020923 183 AEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGK 261 (319)
Q Consensus 183 A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~ 261 (319)
|+++|+||+||+|++|+|+|++++|| |++++++|+||+++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.
T Consensus 166 a~~~g~de~l~ld~~g~v~E~s~sNl-f~v~~~~l~TP~l~~giL~GItR~~il~~~~~~---g~--~v~e~~i~~~~L~ 239 (299)
T PRK12479 166 AAQAGVLEALMLNQQGYVCEGSGDNV-FVVKDGKVLTPPSYLGALEGITRNSVIELCERL---SI--PCEERPFTRHDVY 239 (299)
T ss_pred HHHcCCCEEEEEcCCCcEEECCceEE-EEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHc---CC--eEEEEeCCHHHHH
Confidence 99999999999999999999999999 55689999999996 899999999999999998 87 9999999999999
Q ss_pred ccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHcCCC
Q 020923 262 KAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSGPP 311 (319)
Q Consensus 262 ~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~~~~ 311 (319)
+|||+|+|||++||+||.+||++.+++|++||++++|+++|++.+.....
T Consensus 240 ~adevfltnS~~gi~PV~~id~~~~~~~~~g~~~~~l~~~~~~~~~~~~~ 289 (299)
T PRK12479 240 VADEVFLTGTAAELIPVVKVDSREIGDGKPGSVTKQLTEEFKKLTRERGV 289 (299)
T ss_pred hCCeeeeecCcccEEEEEEECCEEcCCCCcCHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999889999999999999876665433
No 3
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=3.8e-62 Score=453.47 Aligned_cols=273 Identities=28% Similarity=0.452 Sum_probs=248.0
Q ss_pred ccCCeeeCCCCceeCCCCccccccceeeeeeeeeCC----eecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 020923 29 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDG----YLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSA 104 (319)
Q Consensus 29 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~ 104 (319)
|+||++++.+++.+++.||||+||||+|||+++++| ++++|++|++||.+||++|+|+.|++.++|++.+.+++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~~ 80 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGPAIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLRK 80 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcceeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999999 9999999999999999999999889999999999999999
Q ss_pred cCCCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc----ccCCCcEEEEeeeecCCC-C-CCCccccc-cHHHH
Q 020923 105 SNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP----FVSKGVKVITSSIPIKPP-Q-FGTVKSVN-YLPNV 177 (319)
Q Consensus 105 ~~~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~l~~~~~~~~~~-~-~~~~Kt~n-y~~~~ 177 (319)
++..+++||++|++|.+.+++.++....|++++++.|.+.. ...+|+++.++++++..+ . .+++|++| |+.++
T Consensus 81 ~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~r~~~~~~~~~~K~~~~yl~~v 160 (298)
T TIGR01122 81 NNLRSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVSSWRRNAPNTIPTAAKAGGNYLNSL 160 (298)
T ss_pred cCCCCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEEEEEcCCCCCcCccchhhhhhHHHH
Confidence 88888999999999988777766444567888887765321 235799999998877532 3 47999996 99999
Q ss_pred HHHHHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeC
Q 020923 178 LSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVT 256 (319)
Q Consensus 178 ~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~ 256 (319)
+++++|+++|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.|+++|+++ |+ +|+|+.++
T Consensus 161 ~a~~~a~~~g~de~l~ld~~g~v~E~s~sNl-f~v~~~~l~TP~~~~~~L~GItR~~il~la~~~---g~--~v~e~~i~ 234 (298)
T TIGR01122 161 LAKSEARRHGYDEAILLDVEGYVAEGSGENI-FIVKDGVLFTPPVTSSILPGITRDTVITLAKEL---GI--EVVEQPIS 234 (298)
T ss_pred HHHHHHHHcCCCEEEEECCCCCEEECCceEE-EEEECCEEECCCCCCCcCcchHHHHHHHHHHHc---CC--cEEEEeCC
Confidence 9999999999999999999999999999999 55699999999986 899999999999999988 87 99999999
Q ss_pred HHHHhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHH
Q 020923 257 VEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 307 (319)
Q Consensus 257 ~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~ 307 (319)
++||.+|||+|+|||++||+||++||++.+++|++||++++|++.|++.+.
T Consensus 235 ~~eL~~adevfltns~~gv~PV~~id~~~~~~~~~g~~~~~l~~~~~~~~~ 285 (298)
T TIGR01122 235 REELYTADEAFFTGTAAEITPIREVDGRKIGNGRRGPVTKKLQEAFFDLVT 285 (298)
T ss_pred HHHHhhCCEEEEcCCcceEEEEEEECCEECCCCCCChHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999988999999999999985444
No 4
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=4.3e-62 Score=451.02 Aligned_cols=275 Identities=33% Similarity=0.506 Sum_probs=249.5
Q ss_pred ecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Q 020923 27 SSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN 106 (319)
Q Consensus 27 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~ 106 (319)
.+|+||++++..++.++++||||+||||+|||+++++|++++|++|++||.+||++|+++.|++.+++++.+.+++++++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~~g~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i~~~~ 83 (288)
T PRK08320 4 LIYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAYNGRVFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLETLRKNN 83 (288)
T ss_pred EEEECCEEEEHHHCcccccchhhhhcceEEEEEEEECCEeecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhcC
Confidence 46999999999999999999999999999999999999999999999999999999999988999999999999999988
Q ss_pred CCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC---cccCCCcEEEEeeeecCC-C-CCCCccccccHHHHHHHH
Q 020923 107 CRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS---PFVSKGVKVITSSIPIKP-P-QFGTVKSVNYLPNVLSKM 181 (319)
Q Consensus 107 ~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~-~-~~~~~Kt~ny~~~~~a~~ 181 (319)
..+++||+++++|.+.+++.+..+..|.+++++.|.+. ..+.+|+++.++.+.+.. + ..+++|++||+.++++++
T Consensus 84 ~~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~K~~nyl~~v~a~~ 163 (288)
T PRK08320 84 LRDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITVSTRRNRPDALSPQVKSLNYLNNILAKI 163 (288)
T ss_pred CCCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEEeeeccCCCCcCccchhhhhHHHHHHHH
Confidence 88899999999998888887766667777777766432 124579998888776653 2 337899999999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 182 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 182 ~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
+|+++|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.++++|+++ |+ +|+|+.++++||
T Consensus 164 ~A~~~g~de~L~ld~~g~v~E~s~sNl-f~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~---g~--~v~e~~l~~~dL 237 (288)
T PRK08320 164 EANLAGVDEAIMLNDEGYVAEGTGDNI-FIVKNGKLITPPTYAGALEGITRNAVIEIAKEL---GI--PVREELFTLHDL 237 (288)
T ss_pred HHHHcCCCEEEEECCCCeEEEcCcEEE-EEEECCEEECCCCcCCCCcCHHHHHHHHHHHHc---CC--eEEEEECCHHHH
Confidence 999999999999999999999999999 55699999999996 899999999999999998 87 999999999999
Q ss_pred hccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHH
Q 020923 261 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 307 (319)
Q Consensus 261 ~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~ 307 (319)
.+|||+|+|||++||+||++||++.+++|++||++++|++.|.+.+.
T Consensus 238 ~~ade~f~~ns~~gv~pV~~i~~~~~~~~~~g~~~~~l~~~~~~~~~ 284 (288)
T PRK08320 238 YTADEVFLTGTAAEVIPVVKVDGRVIGDGKPGPITKKLLEEFRELTK 284 (288)
T ss_pred HhCCEEEEecChhhEEEEEEECCEECCCCCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888899999999999976553
No 5
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=1.5e-61 Score=446.79 Aligned_cols=274 Identities=31% Similarity=0.432 Sum_probs=245.3
Q ss_pred ecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Q 020923 27 SSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN 106 (319)
Q Consensus 27 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~ 106 (319)
.+|+||++++.+++.++++||||+||||+|||+|+++|++++|++|++||.+||+.|+|+.|++.++|.+.+.+++++++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~~~~~~ 83 (286)
T PRK06680 4 IAYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVRDGKLVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLRELIRRNR 83 (286)
T ss_pred EEEECCEEEEHHHCcccccccccceeeEEEEEEEEECCEEechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 36999999999999999999999999999999999999999999999999999999999988899999999999999988
Q ss_pred CCCceEEEEEeecCCCcccC-CCCCCccEEEEEEEeCCC----cccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHH
Q 020923 107 CRKGSLRYWLSAGVGDFQLS-PVGCHQSTFYVIVIQDDS----PFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKM 181 (319)
Q Consensus 107 ~~~~~iri~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~ 181 (319)
..++++|+++++|.+.+++. +..+..|++++++.|.+. ....+|+++.+++.. ++..+++||+||+.++++++
T Consensus 84 ~~~~~lr~~vtrG~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~Ks~nyl~~vla~~ 161 (286)
T PRK06680 84 VREGLVYLQVTRGVARRDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPDN--RWKRCDIKSVGLLPNVLAKQ 161 (286)
T ss_pred CCceEEEEEEEeCCCCCCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecCC--CCCCCCcchhccHHHHHHHH
Confidence 88899999999997766554 333456788888877543 123678888776533 34567899999999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 182 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 182 ~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
+|+++|+||+|++| +|+|+|++++|||++.++|+|+|||++ ++|+||||+.++++|++. |+ +|+|+.++++||
T Consensus 162 eA~~~g~dd~l~ld-~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~---g~--~v~e~~i~~~el 235 (286)
T PRK06680 162 AAKEAGAQEAWMVD-DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKEL---GL--EVEERPFTLQEA 235 (286)
T ss_pred HHHHCCCCEEEEec-CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHc---CC--eEEEEcCCHHHH
Confidence 99999999999999 999999999999544399999999986 899999999999999998 87 999999999999
Q ss_pred hccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHc
Q 020923 261 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 308 (319)
Q Consensus 261 ~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~ 308 (319)
.+|||+|+|||++||+||.+||++.++++++||++++|++.|++.+..
T Consensus 236 ~~ade~f~~ns~~gi~pV~~id~~~~~~~~~g~~~~~L~~~~~~~~~~ 283 (286)
T PRK06680 236 YAAREAFITAASSFVFPVVQIDGKQIGNGKPGPIAKRLREAYEEFARL 283 (286)
T ss_pred hcCcEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999888999999999999866553
No 6
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=1.9e-61 Score=445.63 Aligned_cols=274 Identities=26% Similarity=0.331 Sum_probs=241.6
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
+|+||++++.+++.++++||||+||||+|||+|+++|++++|++|++||.+||+.|+++.+++.+++++.+.+++++++.
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~~~~~~ 81 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIYNGHPFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLLEKNGL 81 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEECCEEEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999999999999999999999999999888999999999999998877
Q ss_pred CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcccCCCcEEEEeeeecC-CCCCCCccccccHHHHHHHHHHHHc
Q 020923 108 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAEET 186 (319)
Q Consensus 108 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~~~Kt~ny~~~~~a~~~A~~~ 186 (319)
.+++||+++++|.+..++.+.....|+++++..|.+............+...+. ++.++++||+||+.+++++++|+++
T Consensus 82 ~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~~y~~~v~a~~~a~~~ 161 (283)
T PRK07650 82 ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVLKQRRNTPEGAFRLKSHHYLNNILGKREIGND 161 (283)
T ss_pred CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEEEEEecCCCCCcchhHHhHHHHHHHHHHHHHc
Confidence 889999999999776666655555788888877754322222222222333333 4457899999999999999999999
Q ss_pred CCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccce
Q 020923 187 GAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEE 265 (319)
Q Consensus 187 g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~ade 265 (319)
|+||+||+|++|+|+|++++|| |++++|+|+||+++ |+|+||||+.++++|++. |+ +|+|+.++++||.+|||
T Consensus 162 g~de~llln~~G~v~E~s~sNi-f~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~---g~--~v~e~~i~~~dL~~ade 235 (283)
T PRK07650 162 PNKEGIFLTEEGYVAEGIVSNL-FWVKGDIVYTPSLETGILNGITRAFVIKVLEEL---GI--EVKEGFYTKEELLSADE 235 (283)
T ss_pred CCCeEEEECCCCeEEEcCceEE-EEEECCEEEcCCCcCCCcccHHHHHHHHHHHHc---CC--eEEEEecCHHHHhhCCE
Confidence 9999999999999999999999 55699999999986 899999999999999998 87 99999999999999999
Q ss_pred eeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHc
Q 020923 266 MILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 308 (319)
Q Consensus 266 vfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~ 308 (319)
+|+|||++||+||.+||++.++ |++||++++|+++|.+.+..
T Consensus 236 ifl~ns~~gv~pV~~i~~~~~~-g~~g~~~~~l~~~~~~~~~~ 277 (283)
T PRK07650 236 VFVTNSIQEIVPLTRIEERDFP-GKVGMVTKRLQNLYEMQREK 277 (283)
T ss_pred eeeecCcccEEEEEEECCEEeC-CCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999995 78999999999999866654
No 7
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=1.4e-61 Score=443.60 Aligned_cols=266 Identities=33% Similarity=0.491 Sum_probs=241.6
Q ss_pred ccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCC
Q 020923 29 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCR 108 (319)
Q Consensus 29 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~ 108 (319)
|+||++++.+++.++++||||+||||+||||++++|++++|++|++||.+||+.|+|+.|++.+++++.+.++++.++..
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~~~~~~ 80 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVYNGKPFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVAKNEGG 80 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEECCEEecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 78999999999999999999999999999999999999999999999999999999998889999999999999998777
Q ss_pred CceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC---cccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHHHHHH
Q 020923 109 KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS---PFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAEE 185 (319)
Q Consensus 109 ~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A~~ 185 (319)
++.+|+.+++|.+.+++.+..+..+.+++.+.+.+. ....+|+++.+++.++. ..+++|++||+.+++++++|++
T Consensus 81 ~~~~~~~~t~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~~~~~--~~~~~K~~ny~~~~~a~~~a~~ 158 (270)
T cd01558 81 EGDVYIQVTRGVGPRGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVPDIRW--LRCDIKSLNLLNNVLAKQEAKE 158 (270)
T ss_pred CceEEEEEEeCCCccCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEeccccc--CCCCchhhccHHHHHHHHHHHH
Confidence 889999999988777766655566778777776542 23467999888876543 4578999999999999999999
Q ss_pred cCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccc
Q 020923 186 TGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAE 264 (319)
Q Consensus 186 ~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~ad 264 (319)
+|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+||
T Consensus 159 ~g~de~l~ld~~g~v~E~~~sNi-f~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~---g~--~v~e~~i~~~eL~~ad 232 (270)
T cd01558 159 AGADEAILLDADGLVTEGSSSNV-FIVKNGVLVTPPLDNGILPGITRATVIELAKEL---GI--PVEERPFSLEELYTAD 232 (270)
T ss_pred cCCCEEEEEcCCCEEEEcCcEEE-EEEECCEEECCCCcCCCCCChHHHHHHHHHHHc---CC--eEEEEeCCHHHHhhCC
Confidence 99999999999999999999999 55699999999986 899999999999999988 87 9999999999999999
Q ss_pred eeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHH
Q 020923 265 EMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLI 302 (319)
Q Consensus 265 evfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~ 302 (319)
|+|+|||++||+||.+||++.++++++||++++|++.|
T Consensus 233 e~fl~ns~~gv~PV~~i~~~~~~~~~~~~~~~~l~~~~ 270 (270)
T cd01558 233 EVFLTSTTAEVMPVVEIDGRPIGDGKPGPVTKRLREAY 270 (270)
T ss_pred EEEEecCcccEEEEEEECCeECCCCCCCHHHHHHHHhC
Confidence 99999999999999999999998888999999998864
No 8
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=5.8e-61 Score=443.78 Aligned_cols=274 Identities=24% Similarity=0.398 Sum_probs=240.6
Q ss_pred ecccCCeeeCCCC--ceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 020923 27 SSIFGGITTDPAA--MVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSA 104 (319)
Q Consensus 27 ~~~~nG~~~~~~~--~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~ 104 (319)
.+|+||++++.++ +.|+++||||+||||||||+|+++|++++|++|++||.+||++|+|+.|++.+++++.+.+++++
T Consensus 6 ~~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~~G~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~~~~~~ 85 (290)
T PRK12400 6 FVLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLYKGNFHLLDPHITRLYRSMEEIELTLPFSKAELITLLYKLIEN 85 (290)
T ss_pred EEEECCEEechHHcCceeccccchhhhcceEEEEEEEECCEecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 3699999999984 55999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC-CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC--cccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHH
Q 020923 105 SNC-RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS--PFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKM 181 (319)
Q Consensus 105 ~~~-~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~ 181 (319)
++. .+++||+.+++|.+.+++.++....|++++.+.+.+. ....+|+++..++.. ++..+++||+||+.++++++
T Consensus 86 ~~~~~~~~iri~v~rG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~Kt~nyl~~vla~~ 163 (290)
T PRK12400 86 NNFHEDGTIYLQVSRGVQARTHTFSYDVPPTIYAYITKKERPALWIEYGVRAISEPDT--RWLRCDIKSLNLLPNILAAT 163 (290)
T ss_pred cCCCCCEEEEEEEEeCCCCCCCCCCCCCCcEEEEEEecccCchhHHhcCcEEEECCCC--CccCCCCcccccHHHHHHHH
Confidence 875 6789999999987666655444345677766654321 123578887655322 34457899999999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 182 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 182 ~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
+|+++|+||+||+| +|+|+||+++|| |++++|+|+|||++ |+|+||||+.||++|+++ |+ +|+|+.++++||
T Consensus 164 ea~~~g~deaL~l~-~g~v~E~t~sNi-f~v~~~~l~TPpl~~g~L~GItR~~llela~~~---gi--~v~E~~i~~~eL 236 (290)
T PRK12400 164 KAERKGCKEALFVR-NGTVTEGSHSNF-FLIKNGTLYTHPANHLILNGIIRQYVLSLAKTL---RI--PVQEELFSVRDV 236 (290)
T ss_pred HHHHcCCCEEEEEc-CCEEEEcCceEE-EEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHc---CC--cEEEEeCCHHHH
Confidence 99999999999997 899999999999 66799999999986 899999999999999998 87 999999999999
Q ss_pred hccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHcC
Q 020923 261 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSG 309 (319)
Q Consensus 261 ~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~~ 309 (319)
.+|||+|+|||+.||+||++||++.+++|++||+|++|++.|++.+...
T Consensus 237 ~~Adevfltns~~gv~PV~~i~~~~~~~~~~g~~t~~l~~~~~~~~~~~ 285 (290)
T PRK12400 237 YQADECFFTGTTIEILPMTHLDGTAIQDGQVGPITKMLQRSFSQSLLQS 285 (290)
T ss_pred HhCCeeeEccCcceEEEEEEECCEECCCCCcCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998899999999999998776543
No 9
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=7.6e-61 Score=446.13 Aligned_cols=273 Identities=28% Similarity=0.440 Sum_probs=245.7
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCe----ecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGY----LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 103 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~----~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~ 103 (319)
+|+||++++.+++.+++.||||+||||||||+|+++|+ +++|++|++||.+||+.|+|+.|++.++|++.+.++++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 88 (306)
T PRK06606 9 IWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGPAIFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVVR 88 (306)
T ss_pred EEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCCeeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999998 99999999999999999999988899999999999999
Q ss_pred HcCCCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC----cccCCCcEEEEeeeecCCC--CCCCccc-cccHHH
Q 020923 104 ASNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS----PFVSKGVKVITSSIPIKPP--QFGTVKS-VNYLPN 176 (319)
Q Consensus 104 ~~~~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~l~~~~~~~~~~--~~~~~Kt-~ny~~~ 176 (319)
+++..+++||+++++|.+.+++.+.. ..+.+++.+.|.+. ....+|+++.++++.+..+ .++++|+ +||+.+
T Consensus 89 ~~~~~~~~ir~~v~rg~~~~g~~~~~-~~~~~~i~~~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~nyl~~ 167 (306)
T PRK06606 89 KNNLKSAYIRPLVFVGDEGLGVRPHG-LPTDVAIAAWPWGAYLGEEALEKGIRVKVSSWTRHAPNSIPTRAKASGNYLNS 167 (306)
T ss_pred hcCCCCEEEEEEEEecCCccCcCCCC-CCceEEEEEeccccccCcccccCCeEEEEeeEecCCCCCcCcchhhhhccHHH
Confidence 98888899999999998777776543 35666777666432 1235799999888776532 3578995 699999
Q ss_pred HHHHHHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEee
Q 020923 177 VLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNV 255 (319)
Q Consensus 177 ~~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i 255 (319)
++++++|+++|+||+||+|++|+|+|++++|| |++++|+|+||+++ |+|+||||+.|+++|+++ |+ +|+|+.+
T Consensus 168 vla~~ea~~~G~de~l~l~~~g~v~E~~~sNl-f~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~---g~--~v~e~~i 241 (306)
T PRK06606 168 ILAKTEARRNGYDEALLLDVEGYVSEGSGENI-FIVRDGVLYTPPLTSSILEGITRDTVITLAKDL---GI--EVIERRI 241 (306)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCEEEcCceEE-EEEECCEEECCCCcCCcCCCHHHHHHHHHHHHc---CC--cEEEEeC
Confidence 99999999999999999999999999999999 55699999999986 799999999999999988 87 9999999
Q ss_pred CHHHHhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHH
Q 020923 256 TVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 307 (319)
Q Consensus 256 ~~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~ 307 (319)
+++||.+|||+|+|||++||+||++||++.+++|++||++++|+++|.+.+.
T Consensus 242 ~~~eL~~AdevfltnS~~gi~PV~~id~~~~~~g~~g~~~~~L~~~~~~~~~ 293 (306)
T PRK06606 242 TRDELYIADEVFFTGTAAEVTPIREVDGRQIGNGKRGPITEKLQSAYFDIVR 293 (306)
T ss_pred CHHHHhhCCEEEEcCCcceEEEEEEECcEECCCCCCCHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999988899999999999986554
No 10
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=2e-60 Score=439.45 Aligned_cols=272 Identities=23% Similarity=0.277 Sum_probs=236.8
Q ss_pred ecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Q 020923 27 SSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN 106 (319)
Q Consensus 27 ~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~ 106 (319)
.+|+||++++.+.+.++++||||+||||||||+|+++|++++|++|++||.+||++|+|+.|++.++|.+.+.+++++++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~~g~~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~i~~~~ 87 (286)
T PRK13356 8 WTFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAFEGVTPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREGLKRFD 87 (286)
T ss_pred eEEECCEEcchhhcccccccchhhhcceeEEEEEEecCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcC
Confidence 36999999999999999999999999999999999999999999999999999999999888899999999999999876
Q ss_pred CC-CceEEEEEeecCCCcc-cCCCCCCccEEEEEEEeCCCcccCCCcEEEEeeeecCCC-C-CCCcc-ccccHHHHHHHH
Q 020923 107 CR-KGSLRYWLSAGVGDFQ-LSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIKPP-Q-FGTVK-SVNYLPNVLSKM 181 (319)
Q Consensus 107 ~~-~~~iri~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-~-~~~~K-t~ny~~~~~a~~ 181 (319)
.. +++||+++++|.+..+ +.+.. ..+.+.+.+.+.+.. ..+|+++.++++.+..+ . .+++| +.||+.+++|++
T Consensus 88 ~~~~~~ir~~v~rg~g~~~~~~~~~-~~~~~~~~~~~~~~~-~~~gv~l~~~~~~r~~~~~~~~~~K~~~nyl~~vla~~ 165 (286)
T PRK13356 88 PDTALYIRPMYWAEDGFASGVAPDP-ESTRFALCLEEAPMP-EPTGFSLTLSPFRRPTLEMAPTDAKAGCLYPNNARALR 165 (286)
T ss_pred CCCcEEEEEEEEeccCcccCcCCCc-CCceEEEEEEccCCC-CCCcEEEEEeeeecCCCCCCCccceeccchHHHHHHHH
Confidence 54 6899999999866542 32222 234444444443322 24799999998777533 2 35689 678999999999
Q ss_pred HHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 182 EAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 182 ~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
+|+++|+||+||+|++|+|+|++++|| |++++++|+||+++ ++|+||||+.|+++|+++ |+ +|+|++++++||
T Consensus 166 ea~~~g~deal~ld~~G~v~E~~~sNl-f~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~---gi--~v~e~~i~~~eL 239 (286)
T PRK13356 166 EARSRGFDNALVLDMLGNVAETATSNV-FMVKDGVVFTPVPNGTFLNGITRQRVIALLRED---GV--TVVETTLTYEDF 239 (286)
T ss_pred HHHHcCCCEEEEECCCCCEEEcCceEE-EEEECCEEEcCCCCCCcccCHHHHHHHHHHHHc---CC--eEEEEecCHHHH
Confidence 999999999999999999999999999 55699999999986 899999999999999998 87 999999999999
Q ss_pred hccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHcC
Q 020923 261 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSG 309 (319)
Q Consensus 261 ~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~~ 309 (319)
.+|||+|+|||+.||+||++||++.++ +||++++|+++|++....|
T Consensus 240 ~~adevfltns~~gi~PV~~id~~~~~---~g~~~~~l~~~~~~~~~~~ 285 (286)
T PRK13356 240 LEADEVFSTGNYSKVVPVTRFDDRSLQ---PGPVTRRARELYWDWAHGG 285 (286)
T ss_pred HhcCceEEecChheEEEEEEECCEEec---CChHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999995 5899999999998777655
No 11
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=2.1e-60 Score=437.18 Aligned_cols=269 Identities=29% Similarity=0.443 Sum_probs=238.9
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
+|+||++++.+++.++++||||+||||||||||+++|++++|++|++||.+||+.|+|+.|++.+.+++.+.+++++++.
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~~g~~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~~~~~~ 81 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVYNGKLFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELVEKNNL 81 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEECCEEeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999999999999999999999999999889999999999999999888
Q ss_pred CCceEEEEEeecCCCcccC-CCCCCccEEEEEEEeCCCc--ccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHHHHH
Q 020923 108 RKGSLRYWLSAGVGDFQLS-PVGCHQSTFYVIVIQDDSP--FVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAE 184 (319)
Q Consensus 108 ~~~~iri~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A~ 184 (319)
.+++||+.+++|.+.+++. +..+..+.+++++.+.+.+ ...+|+++..+... .+..+++|+.||+.+++++++|+
T Consensus 82 ~~~~irl~~~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~--~~~~~~~K~~nyl~~vla~~eA~ 159 (276)
T TIGR01121 82 NTGHVYFQVTRGVAPRNHQFPAGTVKPVITAYTKEVPRPEENLEKGVKAITVEDI--RWLRCDIKSLNLLGNVLAKQEAH 159 (276)
T ss_pred CceEEEEEEEcCCCCcCCCCCCCCCCcEEEEEEecccCChhHHhcCeEEEEecCC--CccCCCcchhhhHHHHHHHHHHH
Confidence 8899999999986655544 2223456666666654322 23578887665433 23457899999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhcc
Q 020923 185 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKA 263 (319)
Q Consensus 185 ~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~a 263 (319)
++|+||+||++ +|+|+||+++|| |++++|+|+|||++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+|
T Consensus 160 ~~g~de~l~~~-~g~v~E~~~sNi-f~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~---g~--~v~e~~i~~~el~~a 232 (276)
T TIGR01121 160 EKGAYEAILHR-GGTVTEGSSSNV-YGIKDGVLYTHPANNLILNGITRMVILACAEEN---GI--PVKEEPFTKEELLNA 232 (276)
T ss_pred HcCCCEEEEec-CCeEEecCceeE-EEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHC---CC--eEEEEeCCHHHHhcC
Confidence 99999999996 899999999999 55699999999996 899999999999999998 87 999999999999999
Q ss_pred ceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHH
Q 020923 264 EEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILED 305 (319)
Q Consensus 264 devfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~ 305 (319)
||+|+|||++||+||.+||++.+++|++||+|++|+++|++.
T Consensus 233 de~fltns~~gi~PV~~id~~~~~~~~~g~~~~~L~~~~~~~ 274 (276)
T TIGR01121 233 DEVFVSSTTAEITPVIEIDGQQIGDGKPGPWTRQLQKAFEEK 274 (276)
T ss_pred CEEEEecCcccEEEEEEECCEECCCCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999888999999999999754
No 12
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=5.9e-60 Score=437.53 Aligned_cols=270 Identities=23% Similarity=0.286 Sum_probs=238.5
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
+|+||++++.+++.++++||||+||||||||+++++|++++|++|++||.+||++|+|+.|++.+++.+.+.++++.++.
T Consensus 11 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~~~~~ 90 (292)
T PRK07544 11 IWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAYGGKIFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKETLAANGL 90 (292)
T ss_pred EEECCEEEEhHHCccChhhhHhhhcceeEEeeEeeCCcccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 59999999999999999999999999999999999999999999999999999999999889999999999999999888
Q ss_pred CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC----cccCCCcEEEEeeeecCCCC-C-CCcc-ccccHHHHHHH
Q 020923 108 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS----PFVSKGVKVITSSIPIKPPQ-F-GTVK-SVNYLPNVLSK 180 (319)
Q Consensus 108 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~l~~~~~~~~~~~-~-~~~K-t~ny~~~~~a~ 180 (319)
.+++||+++++|.+.+++.++. ..+.+++...+.+. ....+|+++.++++++..+. + +.+| +.||+.+++++
T Consensus 91 ~~~~ir~~v~rg~~~~g~~~~~-~~~~~~v~~~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~k~~~~yl~~vla~ 169 (292)
T PRK07544 91 TDAYVRPVAWRGSEMMGVSAQQ-NKIHLAIAAWEWPSYFDPEAKMKGIRLDIAKWRRPDPETAPSAAKAAGLYMICTISK 169 (292)
T ss_pred CCeEEEEEEEecCCCCCcCCCC-CCcEEEEEEeccccccCccccCCCEEEEEeEEEcCCCCCcCHhhhhhcccHHHHHHH
Confidence 8899999999998777765444 23445555444321 22357999998887765332 2 4567 45799999999
Q ss_pred HHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCCCCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 181 MEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 181 ~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
++|+++|+||+||+|++|+|+|++++|| |+++||+|+||+++++|+||||+.|+++|+++ |+ +|+|++++++||
T Consensus 170 ~~A~~~G~deal~ld~~g~V~E~~~sNl-f~v~~~~l~TP~~~~~L~GItR~~vl~~a~~~---g~--~v~e~~i~~~eL 243 (292)
T PRK07544 170 HAAEAKGYADALMLDYRGYVAEATGANI-FFVKDGVIHTPTPDCFLDGITRQTVIELAKRR---GI--EVVERHIMPEEL 243 (292)
T ss_pred HHHHHcCCCeEEEECCCCCEEEcCceEE-EEEECCEEECCCCcccccchhHHHHHHHHHHc---CC--eEEEEecCHHHH
Confidence 9999999999999999999999999999 55699999999987799999999999999998 87 999999999999
Q ss_pred hccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHH
Q 020923 261 KKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQ 307 (319)
Q Consensus 261 ~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~ 307 (319)
.+|||+|+|||++||+||++||++.++ +||++++|++.|.+.+.
T Consensus 244 ~~adevfltnS~~gi~PV~~i~~~~~~---~g~~~~~l~~~~~~~~~ 287 (292)
T PRK07544 244 AGFSECFLTGTAAEVTPVSEIGEYRFT---PGAITRDLMDDYEALVR 287 (292)
T ss_pred hhcCceeecCccceEEEEEEEeeEEeC---CChHHHHHHHHHHHHHh
Confidence 999999999999999999999999995 68999999999986554
No 13
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=9.6e-59 Score=429.01 Aligned_cols=265 Identities=26% Similarity=0.331 Sum_probs=236.2
Q ss_pred ecccCC-----eeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Q 020923 27 SSIFGG-----ITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQT 101 (319)
Q Consensus 27 ~~~~nG-----~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 101 (319)
.+|+|| +|++++++.+|++|||++||||+||||++++|++++|++|++||.+||++|+++.| +.+++.+++.++
T Consensus 8 ~~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~~g~i~~l~~Hl~RL~~Sa~~l~i~~~-~~~~l~~~i~~~ 86 (292)
T PRK07849 8 VVTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVRDGRPCNLEAHLERLARSAALLDLPEP-DLDRWRRAVELA 86 (292)
T ss_pred EEEECCCCccceEechHHCCccchhcchhccceEEEEEEEECCEECCHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHH
Confidence 579999 99999999999999999999999999999999999999999999999999999877 889999999999
Q ss_pred HHHc--CCCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCC---cccCCCcEEEEeeeec-------CCCCCCCcc
Q 020923 102 VSAS--NCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDS---PFVSKGVKVITSSIPI-------KPPQFGTVK 169 (319)
Q Consensus 102 ~~~~--~~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~l~~~~~~~-------~~~~~~~~K 169 (319)
++++ +..+++||+++++|.+..+ .|.+++.+.|.+. ....+|+++.+++.++ .++.++++|
T Consensus 87 v~~~~~~~~~~~iRl~v~~g~~~~~-------~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p~~~~~~K 159 (292)
T PRK07849 87 IEEWRAPEDEAALRLVYSRGRESGG-------APTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAPWLLAGAK 159 (292)
T ss_pred HHHhcCCCCCeEEEEEEeCCCCCCC-------CCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCcccccccc
Confidence 9887 4568899999999865431 4567777776542 2246789988876432 122467899
Q ss_pred ccccHHHHHHHHHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccc
Q 020923 170 SVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLH 248 (319)
Q Consensus 170 t~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~ 248 (319)
|+||+.+++++++|+++|+||+||+|++|+|+||+++|| |++++|+|+||+.+ |+|+||||+.|+++|++. |+
T Consensus 160 t~ny~~~i~a~~~A~~~g~dd~L~ld~~G~v~E~s~~Ni-f~~~~g~l~TP~~~~giL~GItR~~vie~~~~~---g~-- 233 (292)
T PRK07849 160 TLSYAVNMAALRYAARRGADDVIFTSTDGYVLEGPTSTV-VIATDDRLLTPPPWYGILPGTTQAALFEVAREK---GW-- 233 (292)
T ss_pred hhhhHHHHHHHHHHHHcCCCEEEEEcCCCcEEECCceEE-EEEECCEEECCCCcCCCCccHHHHHHHHHHHHc---CC--
Confidence 999999999999999999999999999999999999999 56799999999987 899999999999999988 87
Q ss_pred eEEEEeeCHHHHhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHc
Q 020923 249 GIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQS 308 (319)
Q Consensus 249 ~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~ 308 (319)
+|+|+.++++||.+|||+|+|||++||+||.+||+++++. ||+|++|+++|++.+.+
T Consensus 234 ~v~er~i~~~eL~~Adevfltns~~gi~pV~~id~~~~~~---~~~~~~l~~~~~~~~~~ 290 (292)
T PRK07849 234 DCEYRALRPADLFAADGVWLVSSVRLAARVHTLDGRPLPR---DPLADELTELVDAAIVS 290 (292)
T ss_pred ceEEEECCHHHHhhCCEEEEecCcceEEEEEEECCEECCC---ChHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999964 69999999999877654
No 14
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=1.8e-58 Score=436.80 Aligned_cols=288 Identities=24% Similarity=0.290 Sum_probs=247.4
Q ss_pred HHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeee---CCe--ecChHHHHHHHHH
Q 020923 4 KAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIR 78 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G~--~~~l~~Hl~RL~~ 78 (319)
.|+|||..+.|+... +|+||++++.+++.+++.||||+||||||||+|++ +|+ +|+|++|++||.+
T Consensus 30 ~~~~~m~~~~~~~~~---------~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~l~~Hl~RL~~ 100 (355)
T PLN03117 30 VPTDYMYVAKCKQGE---------SFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNALRMQT 100 (355)
T ss_pred cccCceEEEEcCCCC---------eEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeCcHHHHHHHHH
Confidence 589999998884332 59999999999999999999999999999999998 898 7899999999999
Q ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHcCC-------CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc-ccCCC
Q 020923 79 SASMAKIQLPFDRKSLRRILIQTVSASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP-FVSKG 150 (319)
Q Consensus 79 Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~-------~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 150 (319)
||++|+|+.| +.++|++.+.+++++++. ...|+|++++++.+..++.+. +.+.+++++.|.+.. ...+|
T Consensus 101 Sa~~L~i~~p-~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~--~~~~~~i~~~p~~~~~~~~~g 177 (355)
T PLN03117 101 GADRLCMTPP-SLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPA--PEYTFLIYASPVGNYHKASSG 177 (355)
T ss_pred HHHHhCCCCC-CHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCC--CCcEEEEEEEeccccccCCCC
Confidence 9999999987 999999999999998763 235789888876444454432 356777777775422 23579
Q ss_pred cEEEEee-eecC-CCCCCCcccc-ccHHHHHHHHHHHHcCCcEEEEEcCC--CcEEEeccceEEEEEeCcEEEcCCCC-C
Q 020923 151 VKVITSS-IPIK-PPQFGTVKSV-NYLPNVLSKMEAEETGAFAAIWLDGE--GFIAEGPNMNVAFVTKERLLLMPQFD-K 224 (319)
Q Consensus 151 ~~l~~~~-~~~~-~~~~~~~Kt~-ny~~~~~a~~~A~~~g~dd~l~ld~~--g~v~E~~~sNvffv~~~~~l~TP~~~-~ 224 (319)
+++.+++ +.+. ++.++++|++ ||+.+++++++|+++|+||+|++|.+ |+|+|++++|| |++++++|+||+++ +
T Consensus 178 i~l~~~~~~~r~~~~~l~~~K~~~nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNl-F~v~~~~l~TP~l~~~ 256 (355)
T PLN03117 178 LNLKVDHKHRRAHSGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNI-FILKGNIVSTPPTSGT 256 (355)
T ss_pred EEEEEcCceEeCCCCCccchhhhhhhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEE-EEEECCEEEeCCCcCC
Confidence 9988864 4454 4567899996 99999999999999999999999974 69999999999 55699999999986 7
Q ss_pred CcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECCE----EeCCCCccHHHHHHHH
Q 020923 225 ILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQ----VIGNGKEGPIAQALLD 300 (319)
Q Consensus 225 iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~----~~~~g~~g~~~~~L~~ 300 (319)
||+||||+.||++|+++ |+ +|+|+.++++||.+|||+|+|||+.+|+||.+|+.. .+++++ +|+|++|++
T Consensus 257 iL~GItR~~vl~la~~~---Gi--~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~-~~~~~~l~~ 330 (355)
T PLN03117 257 ILPGVTRKSISELARDI---GY--QVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGE-EALSTKLHL 330 (355)
T ss_pred CCCCHHHHHHHHHHHHC---CC--EEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCC-ChHHHHHHH
Confidence 99999999999999998 87 999999999999999999999999999999999854 677764 899999999
Q ss_pred HHHHHHHcCCC
Q 020923 301 LILEDMQSGPP 311 (319)
Q Consensus 301 ~~~~~i~~~~~ 311 (319)
+|. +|+.|..
T Consensus 331 ~~~-~~~~g~~ 340 (355)
T PLN03117 331 ILT-NIQMGVV 340 (355)
T ss_pred HHH-HHhCCCC
Confidence 998 8887743
No 15
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=3.1e-58 Score=421.21 Aligned_cols=260 Identities=26% Similarity=0.351 Sum_probs=229.5
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
+|+||++ .+.+|++||||+||||+|||+++++|++++|++|++||.+||++|+++.| +.+.+.+.+.+++. +.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~~~~~l~~~~~--~~ 74 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVRDGQVSLLSRHLQRLQDACERLAIPLD-DWAQLEQEMKQLAA--EL 74 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEECCeeccHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHHHHh--hC
Confidence 5899995 56799999999999999999999999999999999999999999999866 66778888777763 34
Q ss_pred CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc---ccCCCcEEEEeeeecC-CCCCCCccccccHHHHHHHHHH
Q 020923 108 RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP---FVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEA 183 (319)
Q Consensus 108 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~l~~~~~~~~-~~~~~~~Kt~ny~~~~~a~~~A 183 (319)
.++++|+++++|.+.+++.+..+..|.+++++.|.+.. ...+|+++.+++.++. ++.++++||.||+.+++++++|
T Consensus 75 ~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A 154 (268)
T PRK06092 75 ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCPTRLGRNPLLAGIKHLNRLEQVLIRAEL 154 (268)
T ss_pred CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEeccccCCCCCccCcchhhhHHHHHHHHHH
Confidence 57899999999977777766666677888777765422 2358999988876553 4557889999999999999999
Q ss_pred HHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhc
Q 020923 184 EETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKK 262 (319)
Q Consensus 184 ~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~ 262 (319)
+++|+||+||+|++|+|+|++++|| |++++|+|+||+.+ ++|+||||+.++++|+++ |+ +|+|+.++++||.+
T Consensus 155 ~~~g~de~l~l~~~g~v~E~s~sNi-f~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~---g~--~v~e~~i~~~dL~~ 228 (268)
T PRK06092 155 EQTEADEALVLDSEGWVIECCAANL-FWRKGGVVYTPDLDQCGVAGVMRQFILELLAQS---GY--PVVEVDASLEELLQ 228 (268)
T ss_pred HhcCCCEEEEECCCCCEEEccceEE-EEEECCEEECCCccccCcccHHHHHHHHHHHHc---CC--eEEEEECCHHHHhh
Confidence 9999999999999999999999999 55699999999986 789999999999999988 87 99999999999999
Q ss_pred cceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHH
Q 020923 263 AEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLIL 303 (319)
Q Consensus 263 adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~ 303 (319)
|||+|+|||++||+||.+||++.++ +||++++|++.+.
T Consensus 229 adevfltns~~gi~pV~~id~~~~~---~g~~~~~l~~~~~ 266 (268)
T PRK06092 229 ADEVFICNSLMPVWPVRAIGETSYS---SGTLTRYLQPLCE 266 (268)
T ss_pred CCEEEEeCCcceEEEEEEECCEEcc---chHHHHHHHHHHh
Confidence 9999999999999999999999995 4799999999886
No 16
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=4e-58 Score=438.83 Aligned_cols=289 Identities=22% Similarity=0.339 Sum_probs=251.9
Q ss_pred HHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeee---CCe--ecChHHHHHHHHH
Q 020923 4 KAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIR 78 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G~--~~~l~~Hl~RL~~ 78 (319)
.|||||..+.|..+. + |.||++++.+++.+++.|+||+|||||||||+++ +|+ +|++++|++||.+
T Consensus 80 ~~td~m~~~~~~~~~--~-------w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~H~~RL~~ 150 (403)
T PLN02782 80 VPTDYMYIMKCNRDG--E-------FSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENAIRMRN 150 (403)
T ss_pred cccCceEEEEECCCC--c-------EeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHHHHHHHHH
Confidence 479999999996544 3 8899999999999999999999999999999997 565 6899999999999
Q ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHcCC-------CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcc--cCC
Q 020923 79 SASMAKIQLPFDRKSLRRILIQTVSASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSK 149 (319)
Q Consensus 79 Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~-------~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 149 (319)
||++|+|+.+ +.++|.+++.++++.++. ...|||++++++.+.+++.+. ..+++++++.|.+... ..+
T Consensus 151 SA~rL~lp~~-~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~--~~~~~~i~~~p~~~~~~~g~~ 227 (403)
T PLN02782 151 GAERMCMPAP-TVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPA--PEYTFLIYVSPVGNYFKEGVA 227 (403)
T ss_pred HHHHhCcCCC-CHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCC--CCcEEEEEEEECccccccCCc
Confidence 9999999876 899999999999998863 245899999887666677654 3578888888754221 124
Q ss_pred CcEEEEe-eeecC-CCCCCCcccc-ccHHHHHHHHHHHHcCCcEEEEEc--CCCcEEEeccceEEEEEeCcEEEcCCCC-
Q 020923 150 GVKVITS-SIPIK-PPQFGTVKSV-NYLPNVLSKMEAEETGAFAAIWLD--GEGFIAEGPNMNVAFVTKERLLLMPQFD- 223 (319)
Q Consensus 150 g~~l~~~-~~~~~-~~~~~~~Kt~-ny~~~~~a~~~A~~~g~dd~l~ld--~~g~v~E~~~sNvffv~~~~~l~TP~~~- 223 (319)
++++.++ ++.|. ++.++++|++ ||+.+++++++|+++||||+||+| ++|+|+|++++|+ |++++++|+||+++
T Consensus 228 ~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNl-F~v~~~~l~TP~l~~ 306 (403)
T PLN02782 228 PINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNI-FIVKDNVISTPAIKG 306 (403)
T ss_pred cEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEE-EEEECCEEEcCCCcC
Confidence 6677776 35554 4567999987 999999999999999999999999 4899999999999 55689999999986
Q ss_pred CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEE--CCEEe--CCCCccHHHHHHH
Q 020923 224 KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW--DEQVI--GNGKEGPIAQALL 299 (319)
Q Consensus 224 ~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~i--d~~~~--~~g~~g~~~~~L~ 299 (319)
+||+||||+.||++|+++ |+ +|+|+.++++||.+|||+|+|||+.+|+||.+| +++.+ ++|++||++++|+
T Consensus 307 ~iLpGITR~svlela~~~---Gi--~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~ 381 (403)
T PLN02782 307 TILPGITRKSIIDVARSQ---GF--QVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLY 381 (403)
T ss_pred CcCcCHHHHHHHHHHHHc---CC--eEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHH
Confidence 799999999999999998 87 999999999999999999999999999999999 89887 7778999999999
Q ss_pred HHHHHHHHcCCC
Q 020923 300 DLILEDMQSGPP 311 (319)
Q Consensus 300 ~~~~~~i~~~~~ 311 (319)
++|. +||.|..
T Consensus 382 ~~l~-~iq~G~~ 392 (403)
T PLN02782 382 TVLT-SLQMGLI 392 (403)
T ss_pred HHHH-HHhcCCC
Confidence 9997 9998854
No 17
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=5.7e-58 Score=434.09 Aligned_cols=284 Identities=23% Similarity=0.308 Sum_probs=243.5
Q ss_pred HHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeee---CC--eecChHHHHHHHHHH
Q 020923 5 AIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DG--YLYELDQHLDRIIRS 79 (319)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G--~~~~l~~Hl~RL~~S 79 (319)
+++||.+..|.... |+||++++.+++.+++.||||+||||||||++++ +| ++|+|++|++||.+|
T Consensus 28 ~~~~~~~~~~~~~~----------~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~l~~Hl~RL~~S 97 (356)
T PRK13357 28 FTDHMVVIDYKDGK----------WHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFRPDANAKRLQRS 97 (356)
T ss_pred ccceeEEEEecCCc----------ccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeChHHHHHHHHHH
Confidence 56777777773321 8999999999999999999999999999999997 55 588899999999999
Q ss_pred HHHcCCCCCCCHHHHHHHHHHHHHHcCC--------CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc--ccCC
Q 020923 80 ASMAKIQLPFDRKSLRRILIQTVSASNC--------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP--FVSK 149 (319)
Q Consensus 80 a~~l~i~~p~~~~~l~~~i~~l~~~~~~--------~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 149 (319)
|++|+|+ +++.++|++.+.+++++++. ..+++|+++++|.+.+++.+. ..+++++++.|.+.. ...+
T Consensus 98 a~~L~i~-~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~--~~~~~~i~~~~~~~~~~~~~~ 174 (356)
T PRK13357 98 ADRLLMP-ELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPA--EEYIFCVIASPVGAYFKGGVK 174 (356)
T ss_pred HHHhCCC-CCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCC--CccEEEEEEEechhhcccCCC
Confidence 9999997 57999999999999998763 246889999998776666443 257888887765421 1126
Q ss_pred CcEEEEe-eeecC-CCCCCCccc-cccHHHHHHHHHHHHcCCcEEEEEcC--CCcEEEeccceEEEEEeCcEEEcCCCC-
Q 020923 150 GVKVITS-SIPIK-PPQFGTVKS-VNYLPNVLSKMEAEETGAFAAIWLDG--EGFIAEGPNMNVAFVTKERLLLMPQFD- 223 (319)
Q Consensus 150 g~~l~~~-~~~~~-~~~~~~~Kt-~ny~~~~~a~~~A~~~g~dd~l~ld~--~g~v~E~~~sNvffv~~~~~l~TP~~~- 223 (319)
|+++..+ .+.+. ++.++++|+ +||+.+++|+++|+++|+||+||+|. +|+|+|++++|| |++++++|+|||++
T Consensus 175 ~v~l~~~~~~~r~~~~~l~~~Kt~~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNl-F~v~~~~l~TPpl~~ 253 (356)
T PRK13357 175 PVSIWVSDEYDRAAPGGTGAAKVGGNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNF-FFITKDGTVTPPLSG 253 (356)
T ss_pred ceEEEEcCCeEecCCCCcchhhcccccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEE-EEEECCEEEECCCCC
Confidence 7887766 55554 445689999 89999999999999999999999995 799999999999 55799999999997
Q ss_pred CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHH------HhccceeeeecccCceEEEEEEC----CEEeCCCCccH
Q 020923 224 KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEE------GKKAEEMILLGSGVLVRPVVQWD----EQVIGNGKEGP 293 (319)
Q Consensus 224 ~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~d------L~~adevfl~ns~~gi~pV~~id----~~~~~~g~~g~ 293 (319)
+||+||||+.||++|+++ |+ +|+|+.++++| |.+|||+|+|||+.||+||++|| +..+++|++||
T Consensus 254 giL~GItR~~vlela~~~---Gi--~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~g~ 328 (356)
T PRK13357 254 SILPGITRDSLLQLAEDL---GL--TVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEVGP 328 (356)
T ss_pred CCCcchHHHHHHHHHHHC---CC--eEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCCCh
Confidence 799999999999999998 87 99999999999 89999999999999999999998 45788888999
Q ss_pred HHHHHHHHHHHHHH
Q 020923 294 IAQALLDLILEDMQ 307 (319)
Q Consensus 294 ~~~~L~~~~~~~i~ 307 (319)
++++|+++|++.+.
T Consensus 329 ~t~~L~~~~~~~~~ 342 (356)
T PRK13357 329 VTQKLYDELTGIQF 342 (356)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999985443
No 18
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=1.4e-57 Score=413.96 Aligned_cols=251 Identities=37% Similarity=0.569 Sum_probs=229.4
Q ss_pred CccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEEEeecCCCccc
Q 020923 46 DHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQL 125 (319)
Q Consensus 46 drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~~~~iri~v~~g~~~~~~ 125 (319)
||||+||||+||||++++|++++|++|++||.+||+.|+++.+++.+++.+.+.++++.++..+++||+++++|.+.+++
T Consensus 1 drg~~~GdgvFEt~r~~~g~~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~ir~~v~~g~~~~~~ 80 (256)
T cd00449 1 DRGLHYGDGVFEGLRAGKGRLFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANNGASLYIRPLLTRGVGGLGV 80 (256)
T ss_pred CceeeccceEEEEEEEcCcEEEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEEEEEecccccCC
Confidence 79999999999999999999999999999999999999998778999999999999998777889999999999777777
Q ss_pred CCCCCCccEEEEEEEeCCC--cccCCCcEEEEeeeecC--CCCCCCccccccHHHHHHHHHHHHcCCcEEEEEcCCCcEE
Q 020923 126 SPVGCHQSTFYVIVIQDDS--PFVSKGVKVITSSIPIK--PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIA 201 (319)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~--~~~~~g~~l~~~~~~~~--~~~~~~~Kt~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~ 201 (319)
.+..+..|++++++.+.+. ....+|+++.+++..+. ++.++++||.||+.+++++++|+++|+||+||+|++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~~~~~~~~a~~~a~~~g~de~llld~~g~v~ 160 (256)
T cd00449 81 APPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTGGNLNSVLAKQEAAEAGADEALLLDDNGYVT 160 (256)
T ss_pred CCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhhCCHHHHHHHHHHHHcCCCEEEEECCCCcEE
Confidence 6555667888888877653 23568999998887763 5678999999999999999999999999999999999999
Q ss_pred EeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEE
Q 020923 202 EGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQ 280 (319)
Q Consensus 202 E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~ 280 (319)
||+++|| |++++++|+||+++ |+|+||||+.||++|+++ |+ +|+|+.++++||.+|||+|+|||++||+||++
T Consensus 161 E~s~sNl-f~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~---g~--~v~e~~i~~~dL~~adevfl~ns~~gv~pV~~ 234 (256)
T cd00449 161 EGSASNV-FIVKDGELVTPPLDGGILPGITRDSVIELAKEL---GI--KVEERPISLDELYAADEVFLTGTAAEVTPVTE 234 (256)
T ss_pred EcCceEE-EEEECCEEEeCCCCCCcCcchhHHHHHHHHHHc---CC--eEEEEecCHHHHhhCCEEEEccccceEEEEEE
Confidence 9999999 66799999999987 799999999999999998 87 99999999999999999999999999999999
Q ss_pred ECCEEeCCCCccHHHHHHHHHH
Q 020923 281 WDEQVIGNGKEGPIAQALLDLI 302 (319)
Q Consensus 281 id~~~~~~g~~g~~~~~L~~~~ 302 (319)
||++.++.+++||++++|++.|
T Consensus 235 i~~~~~~~~~~~~~~~~l~~~~ 256 (256)
T cd00449 235 IDGRGIGDGKPGPVTRKLRELL 256 (256)
T ss_pred ECCeecCCCCCCHHHHHHHHhC
Confidence 9999998788999999998865
No 19
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=1.4e-57 Score=412.64 Aligned_cols=247 Identities=36% Similarity=0.528 Sum_probs=224.2
Q ss_pred CccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEEEeecCCCccc
Q 020923 46 DHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQL 125 (319)
Q Consensus 46 drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~~~~iri~v~~g~~~~~~ 125 (319)
||||+||||+|||+++++|++++|++|++||.+||++|+|+ |++.+++++.+.++++.++..+++||+++++|.+.+++
T Consensus 1 Drg~~~GdgvFEt~~~~~g~~~~l~~Hl~RL~~Sa~~l~~~-~~~~~~l~~~i~~~i~~~~~~~~~ir~~v~rg~~~~~~ 79 (249)
T cd01559 1 DRGFAYGDGVFETMRALDGRLFLLDAHLARLERSARRLGIP-EPDLPRLRAALESLLAANDIDEGRIRLILSRGPGGRGY 79 (249)
T ss_pred CCcccccceeEEEEEEECCEEccHHHHHHHHHHHHHhcCcC-CCCHHHHHHHHHHHHHhCCCCceEEEEEEecCCCCCCC
Confidence 79999999999999999999999999999999999999999 88999999999999998877789999999998776666
Q ss_pred CCCCCCccEEEEEEEeCCCcccCCCcEEEEeeeecC-CCCCCCccccccHHHHHHHHHHHHcCCcEEEEEcCCCcEEEec
Q 020923 126 SPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGP 204 (319)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~~~Kt~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~E~~ 204 (319)
.+..+..|.+++.+.|.+.....+|+++.+++.++. ++.++++||+||+.+++++++|+++|+||+||+|++|+|+|++
T Consensus 80 ~~~~~~~~~~~i~~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~a~~~g~de~l~l~~~g~v~E~~ 159 (249)
T cd01559 80 APSVCPGPALYVSVIPLPPAWRQDGVRLITCPVRLGEQPLLAGLKHLNYLENVLAKREARDRGADEALFLDTDGRVIEGT 159 (249)
T ss_pred CCCCCCCCEEEEEeccCCHHHHhCCcEEEEcccccCCCCCCCCcchhhhHHHHHHHHHHHhcCCCEEEEEcCCCCEEEec
Confidence 666666788888777654434568999999887663 5678999999999999999999999999999999999999999
Q ss_pred cceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECC
Q 020923 205 NMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDE 283 (319)
Q Consensus 205 ~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~ 283 (319)
++|| |++++|+|+||+.+ |+|+||||+.++++|+++ |+ +|+|+.++++||.+|||+|+|||++||+||.+||+
T Consensus 160 ~~Ni-f~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~---g~--~v~e~~i~~~el~~ade~~~~ns~~gi~pV~~id~ 233 (249)
T cd01559 160 ASNL-FFVKDGELVTPSLDRGGLAGITRQRVIELAAAK---GY--AVDERPLRLEDLLAADEAFLTNSLLGVAPVTAIDD 233 (249)
T ss_pred ceEE-EEEECCEEECCCcccCccccHHHHHHHHHHHHc---Cc--eEEEEecCHHHHhhCCEEEEecCccceeEEEEECC
Confidence 9999 55689999999986 799999999999999998 87 99999999999999999999999999999999998
Q ss_pred EEeCCCCccHHHHHHHHHH
Q 020923 284 QVIGNGKEGPIAQALLDLI 302 (319)
Q Consensus 284 ~~~~~g~~g~~~~~L~~~~ 302 (319)
+.+++||++++|+++|
T Consensus 234 ---~~~~~~~~~~~l~~~~ 249 (249)
T cd01559 234 ---HDGPPGPLTRALRELL 249 (249)
T ss_pred ---cccCccHHHHHHHHhC
Confidence 3456899999999875
No 20
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=2.3e-57 Score=424.01 Aligned_cols=269 Identities=24% Similarity=0.344 Sum_probs=230.7
Q ss_pred ccCCeeeCCCCceeCCCCccccccceeeeeeeee---CCe--ecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q 020923 29 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGY--LYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVS 103 (319)
Q Consensus 29 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~ 103 (319)
|+||++++.+++.|+++||||+||||||||++++ +|+ +|+|++|++||.+||++|+|+. ++.++|++.+.++++
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~-~~~~~l~~~l~~~~~ 79 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPE-LPDELFLEALRQLVK 79 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCC-CCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999988 898 7888999999999999999984 599999999999999
Q ss_pred HcCCC--------CceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcccCC---CcEEEE-eeeecCCC-CCCCccc
Q 020923 104 ASNCR--------KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSK---GVKVIT-SSIPIKPP-QFGTVKS 170 (319)
Q Consensus 104 ~~~~~--------~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~l~~-~~~~~~~~-~~~~~Kt 170 (319)
+++.. .+++|++++++.+.+++.+.. .+++++.+.|.+. .... ++++.. ..+.+..+ .++++||
T Consensus 80 ~~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~--~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~ 156 (313)
T TIGR01123 80 ANKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAP--EYLFYVFASPVGA-YFKGGLAPVSIFVTTEYDRAAPGGTGAVKV 156 (313)
T ss_pred HccccCCCCCCCCcEEEEeEEEecCCccccCCCC--ccEEEEEEEEchh-hccccccceeEEecccceecCCCCCcccee
Confidence 87631 467999999987766665432 5777777776542 1222 345543 34444433 4789999
Q ss_pred -cccHHHHHHHHHHHHcCCcEEEEEcCCCc--EEEeccceEEEEEe-CcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCC
Q 020923 171 -VNYLPNVLSKMEAEETGAFAAIWLDGEGF--IAEGPNMNVAFVTK-ERLLLMPQFD-KILSGCTAKRVLTLAKALVREG 245 (319)
Q Consensus 171 -~ny~~~~~a~~~A~~~g~dd~l~ld~~g~--v~E~~~sNvffv~~-~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g 245 (319)
+||+.+++|+++|+++|+||+||+|++|. |+|++++|||| ++ +|+|+|||++ ++|+||||+.||++|+++ |
T Consensus 157 ~~nyl~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~-v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~---G 232 (313)
T TIGR01123 157 GGNYAASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFF-ITGDGELVTPPLSGSILPGITRDSLLQLAKDL---G 232 (313)
T ss_pred ccccHHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEE-EEcCCEEEeCCCCCCCCcchHHHHHHHHHHHc---C
Confidence 69999999999999999999999999977 99999999955 56 5799999987 799999999999999998 8
Q ss_pred ccceEEEEeeCHHHHhcc----ceeeeecccCceEEEEEE--CCEE--eCCCCccHHHHHHHHHHHHHHH
Q 020923 246 KLHGIKVGNVTVEEGKKA----EEMILLGSGVLVRPVVQW--DEQV--IGNGKEGPIAQALLDLILEDMQ 307 (319)
Q Consensus 246 ~~~~v~e~~i~~~dL~~a----devfl~ns~~gi~pV~~i--d~~~--~~~g~~g~~~~~L~~~~~~~i~ 307 (319)
+ +|+|++++++||.+| ||+|+|||+.||+||++| |++. +++|++||++++|+++|++.+.
T Consensus 233 i--~v~e~~i~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~l~~~~~~~~~ 300 (313)
T TIGR01123 233 M--EVEERRIDIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKALYDELTDIQY 300 (313)
T ss_pred C--eEEEEecCHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHHHHHHHHHHhc
Confidence 7 999999999999999 999999999999999999 7875 6778899999999999986544
No 21
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=2.3e-57 Score=413.86 Aligned_cols=255 Identities=28% Similarity=0.385 Sum_probs=226.1
Q ss_pred ccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCC
Q 020923 29 IFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCR 108 (319)
Q Consensus 29 ~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~ 108 (319)
|+||+. ++.++++||||+||||+|||+|+++|++++|++|++||.+||+.|+++.| +.+++++.+.++++.+ .
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~~G~~~~l~~Hl~RL~~Sa~~l~~~~~-~~~~l~~~~~~~~~~~--~ 73 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVRNGKIELLDLHLERLQDAAARLGIPLP-DWDALREEMAQLAAGY--S 73 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEECCEeccHHHHHHHHHHHHHhhCCCCC-CHHHHHHHHHHHHHhC--C
Confidence 789994 67799999999999999999999999999999999999999999999876 8999999999998875 4
Q ss_pred CceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc---ccCCCcEEEEeeeecC-CCCCCCccccccHHHHHHHHHHH
Q 020923 109 KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP---FVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAE 184 (319)
Q Consensus 109 ~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~l~~~~~~~~-~~~~~~~Kt~ny~~~~~a~~~A~ 184 (319)
++++|+++++|.+.+++.+..+..+.+++.+.|.+.. ...+|+++.+++.++. ++.++++||.||+.+++++++|+
T Consensus 74 ~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~Kt~~y~~~~~a~~~A~ 153 (261)
T TIGR03461 74 LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSPVRLGRNPLLAGIKHLNRLEQVLIKAELE 153 (261)
T ss_pred CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEeccccCCCCCCcCccccccHHHHHHHHHhh
Confidence 7899999999876666655555567777777665422 2357999888876553 45678999999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhcc
Q 020923 185 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKA 263 (319)
Q Consensus 185 ~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~a 263 (319)
++|+||+||+|++|+|+|++++|| |++++|+|+||+++ ++|+||||+.++++|++. |+ +|+|+.++++||.+|
T Consensus 154 ~~g~de~llln~~g~v~E~s~sNi-f~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~---g~--~v~E~~i~~~eL~~a 227 (261)
T TIGR03461 154 NSEADEALVLDTDGNVVECTAANI-FWRKGNQVFTPDLSYCGVAGVMRQHVLALLPAL---GY--EIEEVKAGLEELLSA 227 (261)
T ss_pred hcCCCEEEEECCCCCEEEeccEEE-EEEECCEEECCCccccCcccHHHHHHHHHHHHc---CC--eEEEEecCHHHHhhC
Confidence 999999999999999999999999 55699999999986 899999999999999988 87 999999999999999
Q ss_pred ceeeeecccCceEEEEEECCEEeCCCCccHHHHHHH
Q 020923 264 EEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALL 299 (319)
Q Consensus 264 devfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~ 299 (319)
||+|+|||++||+||.+||++.++ +||+|++|+
T Consensus 228 de~f~~ns~~gi~pV~~id~~~~~---~~~~~~~l~ 260 (261)
T TIGR03461 228 DEVFITNSLMGVVPVNAIGETSYP---SRTLTRLLQ 260 (261)
T ss_pred CEEEEeCCccceEEEEEECCEEec---chHHHHHhh
Confidence 999999999999999999999996 469998875
No 22
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=6.4e-57 Score=414.53 Aligned_cols=256 Identities=29% Similarity=0.449 Sum_probs=228.3
Q ss_pred eeCCCCccccccceeeeeeeeeC-----CeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC-------CC
Q 020923 41 VIPMDDHMVHRGHGVFDTAAICD-----GYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN-------CR 108 (319)
Q Consensus 41 ~i~~~drg~~yG~gvFEt~rv~~-----G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~-------~~ 108 (319)
.++++||||+||||||||+|+++ |++|+|++|++||.+||++|+++ +++.++|.+.+.+++++++ ..
T Consensus 1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~-~~~~~~l~~~i~~~i~~~~~~~~~~~~~ 79 (279)
T cd01557 1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLP-PFSVEEFIDAIKELVKLDADWVPYGGGA 79 (279)
T ss_pred CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHHhccccCCCCCCC
Confidence 37899999999999999999999 89999999999999999999999 8899999999999999873 35
Q ss_pred CceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcc--cCCCcEEEEeeeecCCC-CCCCccc-cccHHHHHHHHHHH
Q 020923 109 KGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSKGVKVITSSIPIKPP-QFGTVKS-VNYLPNVLSKMEAE 184 (319)
Q Consensus 109 ~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~l~~~~~~~~~~-~~~~~Kt-~ny~~~~~a~~~A~ 184 (319)
+++||++|++|.+.+++.++ ..+++++++.+.+... ..+|+++.++++.+..+ ..+.+|+ +||+.+++++++|+
T Consensus 80 ~~~ir~~v~rg~~~~g~~~~--~~~~~~i~~~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~K~~~nyl~~vla~~eA~ 157 (279)
T cd01557 80 SLYIRPFIFGTDPQLGVSPA--LEYLFAVFASPVGAYFKGGEKGVSALVSSFRRAAPGGPGAAKAGGNYAASLLAQKEAA 157 (279)
T ss_pred CEEEEEEEEeccccCCcCCC--CccEEEEEEEEccccccCCCCCeEEEEeeEEcCCCCCCcccchhhccHHHHHHHHHHH
Confidence 68999999999777676554 4677887777654221 34799999888777544 3457995 89999999999999
Q ss_pred HcCCcEEEEEcCC-CcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhc
Q 020923 185 ETGAFAAIWLDGE-GFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKK 262 (319)
Q Consensus 185 ~~g~dd~l~ld~~-g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~ 262 (319)
++|+||+||+|++ |+|+|++++|| |++++++|+||+++ ++|+||||+.|+++|+++ |+ +|+|+.++++||.+
T Consensus 158 ~~g~de~l~ld~~~g~v~E~~~sNl-f~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~---Gi--~v~e~~i~~~~l~~ 231 (279)
T cd01557 158 EKGYDQALWLDGAHGYVAEVGTMNI-FFVKDGELITPPLDGSILPGITRDSILELARDL---GI--KVEERPITRDELYE 231 (279)
T ss_pred HCCCCEEEEEcCCCCEEEEeCcEEE-EEEECCEEEcCCCcCCCCCchHHHHHHHHHHHc---CC--eEEEEeCCHHHHhh
Confidence 9999999999999 99999999999 55699999999997 899999999999999998 87 99999999999999
Q ss_pred cceeeeecccCceEEEEEECCEEe--CCCCccHHHHHHHHHHHHH
Q 020923 263 AEEMILLGSGVLVRPVVQWDEQVI--GNGKEGPIAQALLDLILED 305 (319)
Q Consensus 263 adevfl~ns~~gi~pV~~id~~~~--~~g~~g~~~~~L~~~~~~~ 305 (319)
|||+|+|||++||+||++||++.+ +++++||++++|++.|++.
T Consensus 232 ade~f~~ns~~gi~pV~~i~~~~~~~~~~~~gp~~~~l~~~~~~~ 276 (279)
T cd01557 232 ADEVFATGTAAVVTPVGEIDYRGKEPGEGEVGPVTKKLYDLLTDI 276 (279)
T ss_pred CCEEEEecceeEEEEEEEEccccccCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998 7788999999999999743
No 23
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-56 Score=409.56 Aligned_cols=259 Identities=17% Similarity=0.155 Sum_probs=227.3
Q ss_pred heecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Q 020923 25 MYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSA 104 (319)
Q Consensus 25 ~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~ 104 (319)
|..+|+||++++.+++. +|++||||+|||||+++|++++|++|++||.+||+++++ .|++.+++.+.+.++++
T Consensus 2 ~~~~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~~g~~~~l~~Hl~RL~~sa~~l~~-~~~~~~~l~~~l~~~~~- 74 (266)
T PRK09266 2 MPLIELNGRPATAEDLA-----ALALANYGHFTSMQVRDGRVRGLDLHLQRLRRASRELFG-AALDDDRVRAQLRAALA- 74 (266)
T ss_pred ccEEEECCEECCHHHhh-----hHhhccceEEEEEEEECCEEcCHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHh-
Confidence 56689999999998876 599999999999999999999999999999999999865 47899999999999984
Q ss_pred cCCCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHHHHH
Q 020923 105 SNCRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAE 184 (319)
Q Consensus 105 ~~~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A~ 184 (319)
++..+++||+.+++|.+++++. +....|++++.+.|.+. ...+|+++.+++.++ .++++|+.||+.+++++++|+
T Consensus 75 ~~~~~~~ir~~v~r~~g~~~~~-~~~~~~~~~i~~~~~~~-~~~~~v~l~~~~~~r---~~~~~K~~~~l~~vla~~~a~ 149 (266)
T PRK09266 75 AGPADASVRVTVFAPDFDFRNP-LADVAPDVLVATSPPAD-GPAGPLRLQSVPYER---ELPHIKHVGTFGQLHLRRLAQ 149 (266)
T ss_pred cCCCcEEEEEEEEecCcccCCC-CCCCCceEEEEEecCCc-CCCCCeEEEEEEecc---cCCCCCCCCcHHHHHHHHHHH
Confidence 3556789999999987766653 33345777776665432 235789888887654 357899999999999999999
Q ss_pred HcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCCCCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccc
Q 020923 185 ETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAE 264 (319)
Q Consensus 185 ~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~ad 264 (319)
++|+||+||+|++|+|+||+++|| |++++|+|+||+. ++|+||||+.|+++++++ |+ +|+|+.++++||.+||
T Consensus 150 ~~g~de~l~ln~~g~v~E~~~sNl-f~v~~~~l~TP~~-~~L~GItR~~ll~~~~~~---g~--~v~e~~i~~~eL~~ad 222 (266)
T PRK09266 150 RAGFDDALFVDPDGRVSEGATWNL-GFWDGGAVVWPQA-PALPGVTMALLQRGLERL---GI--PQRTRPVTLADLGRFA 222 (266)
T ss_pred HcCCCeEEEEcCCCcEEEcCceEE-EEEECCEEECCCC-CccchHHHHHHHHHHHHc---CC--eeEEEECCHHHHHHhh
Confidence 999999999999999999999999 5579999999985 899999999999999988 87 9999999999999999
Q ss_pred eeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHH
Q 020923 265 EMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILE 304 (319)
Q Consensus 265 evfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~ 304 (319)
|+|+|||++||+||.+||+++++++ +|++++|++.|++
T Consensus 223 evfltnSl~gi~pV~~i~~~~~~~~--~~~~~~l~~~~~~ 260 (266)
T PRK09266 223 GAFACNAWRGQRAVSAIDDVALPDS--HALLELLRRAYEA 260 (266)
T ss_pred HhhhhcCccceEEEEEECCEECCCC--chHHHHHHHHHHh
Confidence 9999999999999999999999754 8999999999964
No 24
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=2e-56 Score=425.29 Aligned_cols=287 Identities=22% Similarity=0.306 Sum_probs=245.1
Q ss_pred HHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeee---CCee--cChHHHHHHHHH
Q 020923 4 KAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGYL--YELDQHLDRIIR 78 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G~~--~~l~~Hl~RL~~ 78 (319)
.|+|||..+.|..+. .|.||++++.+++.+++.||||+|||||||||+++ +|++ |++++|++||.+
T Consensus 66 ~~td~m~~~~~~~~~---------~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~ 136 (388)
T PLN02259 66 NPADYMYVMKCSKDG---------EFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKL 136 (388)
T ss_pred cccCceEEEEECCCC---------eEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHH
Confidence 478999999996543 39999999999999999999999999999999998 8987 889999999999
Q ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHcCC-------CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcccCCCc
Q 020923 79 SASMAKIQLPFDRKSLRRILIQTVSASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFVSKGV 151 (319)
Q Consensus 79 Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~-------~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 151 (319)
||++|+|+.| +.+++.+++.++++.++. ...|||++++++.+.+++.+. ..+++++++.|.+.. +.+|+
T Consensus 137 SA~rL~lp~~-~~e~~~~~i~~lv~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~--~~~~~~i~~~p~~~~-~~~g~ 212 (388)
T PLN02259 137 GAERMLMPSP-SVDQFVNAVKQTALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPA--PEYTFIVYASPVGNY-FKEGM 212 (388)
T ss_pred hHHHhCCCCc-CHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCcCCC--CCcEEEEEEEechhh-hhcCc
Confidence 9999999876 899999999999998763 234889888765445666554 367888888775422 23454
Q ss_pred ---EEEEe-eeecC-CCCCCCcccc-ccHHHHHHHHHHHHcCCcEEEEEcC--CCcEEEeccceEEEEEeCcEEEcCCCC
Q 020923 152 ---KVITS-SIPIK-PPQFGTVKSV-NYLPNVLSKMEAEETGAFAAIWLDG--EGFIAEGPNMNVAFVTKERLLLMPQFD 223 (319)
Q Consensus 152 ---~l~~~-~~~~~-~~~~~~~Kt~-ny~~~~~a~~~A~~~g~dd~l~ld~--~g~v~E~~~sNvffv~~~~~l~TP~~~ 223 (319)
++.++ ++.|. ++.++++|++ ||+.+++++++|+++||||+||+|. +|+|+|++++|+ |++++++|+||+++
T Consensus 213 ~~i~l~v~~~~~Ra~p~~~g~~K~~~NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNl-F~v~~~~l~TP~l~ 291 (388)
T PLN02259 213 AALNLYVEEEYVRAAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNV-FVVKGRTISTPATN 291 (388)
T ss_pred ceEEEEeecceeccCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEE-EEEECCEEEcCCCc
Confidence 45543 45554 4457999985 9999999999999999999999997 999999999999 56689999999986
Q ss_pred -CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECC--E--EeCCCCccHHHHHH
Q 020923 224 -KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDE--Q--VIGNGKEGPIAQAL 298 (319)
Q Consensus 224 -~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~--~--~~~~g~~g~~~~~L 298 (319)
+||+||||+.||++|++. |+ +|+|++++++||.+|||+|+|||+.+|+||.+|+. + .++.+ .||+|++|
T Consensus 292 ~~iL~GITR~sIl~la~~~---G~--~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~-~g~~t~~L 365 (388)
T PLN02259 292 GTILEGITRKSVMEIASDQ---GY--QVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTG-DESVCQKL 365 (388)
T ss_pred CCcCcCHHHHHHHHHHHHC---CC--eEEEEECCHHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCC-CCHHHHHH
Confidence 799999999999999998 87 99999999999999999999999999999999985 3 36554 58999999
Q ss_pred HHHHHHHHHcCCC
Q 020923 299 LDLILEDMQSGPP 311 (319)
Q Consensus 299 ~~~~~~~i~~~~~ 311 (319)
+++|. +||.|..
T Consensus 366 ~~~l~-~iq~G~~ 377 (388)
T PLN02259 366 RSVLV-GIQTGLI 377 (388)
T ss_pred HHHHH-HHHcCCC
Confidence 99998 9999854
No 25
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.6e-54 Score=411.31 Aligned_cols=288 Identities=22% Similarity=0.279 Sum_probs=244.5
Q ss_pred HHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeee---CCee--cChHHHHHHHHH
Q 020923 4 KAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIC---DGYL--YELDQHLDRIIR 78 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~---~G~~--~~l~~Hl~RL~~ 78 (319)
.|||||..+.|..+. + |-++++++.....+++.|++|+|||||||||+++ +|++ |++++|++||.+
T Consensus 62 ~~td~m~~~~~~~~~--~-------w~~~~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~ 132 (384)
T PLN02883 62 VRTDFMFATKSCRDG--N-------FEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKI 132 (384)
T ss_pred eecCceEEEEEcCCC--c-------ccCCeEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHH
Confidence 479999999986544 3 8899999999999999999999999999999998 6776 578899999999
Q ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHcCC-------CCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCcc--cCC
Q 020923 79 SASMAKIQLPFDRKSLRRILIQTVSASNC-------RKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPF--VSK 149 (319)
Q Consensus 79 Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~-------~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 149 (319)
||++|+|+.+ +.++|.++++++++.+.. ...|||++++++.+.+++.+. ..+++++++.|.+... ..+
T Consensus 133 SA~rL~lp~~-~~e~~~~~i~~lv~~n~~wvp~~~~~~lYIRp~v~~~~~~lG~~~~--~~~~~~i~~~p~~~y~~~g~~ 209 (384)
T PLN02883 133 GAERMCMHSP-SVHQFIEGVKQTVLANRRWVPPPGKGSLYLRPLLFGSGASLGVAAA--PEYTFLVFGSPVQNYFKEGTA 209 (384)
T ss_pred HHHHhCCCCc-CHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCC--CCeEEEEEEEecccccccCcc
Confidence 9999999876 999999999999998863 235889999998776676543 3678888888764321 123
Q ss_pred CcEEEEeee-ecC-CCCCCCcccc-ccHHHHHHHHHHHHcCCcEEEEEcCC--CcEEEeccceEEEEEeCcEEEcCCCC-
Q 020923 150 GVKVITSSI-PIK-PPQFGTVKSV-NYLPNVLSKMEAEETGAFAAIWLDGE--GFIAEGPNMNVAFVTKERLLLMPQFD- 223 (319)
Q Consensus 150 g~~l~~~~~-~~~-~~~~~~~Kt~-ny~~~~~a~~~A~~~g~dd~l~ld~~--g~v~E~~~sNvffv~~~~~l~TP~~~- 223 (319)
++++.+++. +|. +..++++|++ ||+.+++++++|+++||||+||+|.+ |+|+|++++|| |++++++|+||+++
T Consensus 210 ~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~lla~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNl-F~v~~~~l~TP~l~~ 288 (384)
T PLN02883 210 ALNLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANI-FLVKGNIIVTPATSG 288 (384)
T ss_pred eEEEEECccccccCCCCCcccchhhhHHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEE-EEEECCEEEeCCCcC
Confidence 566666643 453 4467999987 89999999999999999999999965 69999999999 55689999999996
Q ss_pred CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECCE--E--eCCCCccHHHHHHH
Q 020923 224 KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQ--V--IGNGKEGPIAQALL 299 (319)
Q Consensus 224 ~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~--~--~~~g~~g~~~~~L~ 299 (319)
+||+||||+.||++|+++ |+ +|+|+.++++||.+|||+|+|||+.+|+||.+|+.+ . +..+ .||++++|+
T Consensus 289 ~iLpGITR~svl~la~~~---G~--~V~Er~i~~~eL~~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~-~G~vt~~L~ 362 (384)
T PLN02883 289 TILGGITRKSIIEIALDL---GY--KVEERRVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVG-DGIVTQQLR 362 (384)
T ss_pred CcCcCHHHHHHHHHHHHC---CC--eEEEEECCHHHHHhCCEeeeccChhheEEEEEEeccCceeecccC-CCHHHHHHH
Confidence 799999999999999998 87 999999999999999999999999999999999843 1 1222 489999999
Q ss_pred HHHHHHHHcCCC
Q 020923 300 DLILEDMQSGPP 311 (319)
Q Consensus 300 ~~~~~~i~~~~~ 311 (319)
++|. +||.|..
T Consensus 363 ~~l~-~iq~G~~ 373 (384)
T PLN02883 363 SILL-GIQTGSI 373 (384)
T ss_pred HHHH-HHHcCCC
Confidence 9997 9999854
No 26
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-52 Score=387.02 Aligned_cols=271 Identities=31% Similarity=0.464 Sum_probs=234.6
Q ss_pred cccCCeeeCCCCceeCCCCccccccceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCC
Q 020923 28 SIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNC 107 (319)
Q Consensus 28 ~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~ 107 (319)
.|+||++++.+.+.+++.||+++||+++|||+++++|++|+|++|++||.+||+.|+++.|.+.+++......+++.++.
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~g~~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (284)
T COG0115 4 IWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYNGKLFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQLLLAKNNL 83 (284)
T ss_pred EeECCEEccCcccccCcccceeccccceeEEEEEeCCcccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred CC-ceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCccc----CCCcEEEEee-eecCCC-CCCCccccccHHHHHHH
Q 020923 108 RK-GSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSPFV----SKGVKVITSS-IPIKPP-QFGTVKSVNYLPNVLSK 180 (319)
Q Consensus 108 ~~-~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~l~~~~-~~~~~~-~~~~~Kt~ny~~~~~a~ 180 (319)
.. .|+|+.+..+.+..+..+ +..+.+.+++.|.+.... .+|+.+.+++ +++.++ ....+|+.||+.+++++
T Consensus 84 ~~~~y~r~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~k~~~y~~~~~a~ 161 (284)
T COG0115 84 VPGLYIRPLVRGGGGGLGVRD--ATEPTLIVAASPVGAYLKGGRLEKGVVLVISSPVRRAPPGPGAAKKTGNYLSSVLAK 161 (284)
T ss_pred CCceEEEEEEEeecCCCCcCC--CCccEEEEEEEecccccCcccccCCeEEEEeehhhccCCCcchhhhhcccHHHHHHH
Confidence 55 577788777666666554 346777778877654221 3576666653 333333 24578999999999999
Q ss_pred HHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHH
Q 020923 181 MEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEE 259 (319)
Q Consensus 181 ~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~d 259 (319)
++|+++|+||+|++|.+|+|+|++++|+||+..||+|+||+++ ++|+||||+.+|++|+++ |+ +++|++++.+|
T Consensus 162 ~~A~~~G~~eal~~~~~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~---G~--~v~E~~i~~~~ 236 (284)
T COG0115 162 REAKAAGADEALLLDEDGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKEL---GL--TVEERPITLED 236 (284)
T ss_pred HHHHHCCCCEEEEecCCCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHc---Cc--eEEEeecCHHH
Confidence 9999999999999999999999999999555338899999997 799999999999999987 87 99999999999
Q ss_pred HhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHHHHHHHHHHcC
Q 020923 260 GKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALLDLILEDMQSG 309 (319)
Q Consensus 260 L~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~~~~~~~i~~~ 309 (319)
|.+|||+|+|||+++|+||.+||++ . +++||+|++|+++|. .++.+
T Consensus 237 l~~adevf~t~t~~~v~PV~~i~~~-~--~~~gpit~~l~~~~~-~~~~~ 282 (284)
T COG0115 237 LKQADEVFLTNTAAGVTPVGLIDGR-V--GQPGPVTKKLRELLT-DIQYG 282 (284)
T ss_pred HhhCCEEEEEccceEEEEEEEECCc-c--CCCChHHHHHHHHHH-HHhcc
Confidence 9999999999999999999999888 4 789999999999998 44443
No 27
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-46 Score=342.42 Aligned_cols=287 Identities=33% Similarity=0.472 Sum_probs=235.9
Q ss_pred HHHHHHHhcccCcccchhhhhheecccCCeeeCCCCceeCCCCccccccceeeeeeeeeCC-----eecChHHHHHHHHH
Q 020923 4 KAIERIKSTQANQKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAICDG-----YLYELDQHLDRIIR 78 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~~~~~~~~i~~~drg~~yG~gvFEt~rv~~G-----~~~~l~~Hl~RL~~ 78 (319)
+|||||+.++|+ +. +|.+++..-+.+..++ .-.-.|+||+|+||+++++.+ ++|+++.|+.|+.+
T Consensus 55 ~~td~m~~~k~~-~~--gw~~~~I~p~gni~~~-------Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrPd~N~~Rm~~ 124 (379)
T KOG0975|consen 55 VFTDHMLTIKWS-ED--GWSQGEISPFGNLSLH-------PAAKVLHYGQGLFEGLKAYRTEDGKIRLFRPDQNMDRMLR 124 (379)
T ss_pred cccceeEEEecc-cc--CcCCCCccCcCCEeeC-------hhhhceecchhhccccccccCCCCeEEEecchhhHHHHHh
Confidence 689999999998 54 4666555555554444 444557999999999998754 79999999999999
Q ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHcCC-----CCc--eEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc-cc-CC
Q 020923 79 SASMAKIQLPFDRKSLRRILIQTVSASNC-----RKG--SLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP-FV-SK 149 (319)
Q Consensus 79 Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~-----~~~--~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 149 (319)
||.++.||. ++.+++.++|++++..++. ..+ |+|+++.++....+.. .+.++++++++.|.... .. .+
T Consensus 125 sA~r~~lP~-p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~--~~~e~~l~vi~spvg~yf~~g~~ 201 (379)
T KOG0975|consen 125 SAERACLPS-PDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVS--PAPEATLFVIVSPVGPYFKSGFK 201 (379)
T ss_pred hhhhccCCC-CCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccc--cCCcceEEEEEcccchhcccccc
Confidence 999999985 5889999999999988652 223 6777777665445543 34578999999886432 22 57
Q ss_pred CcEEEEee-eecC-CCCCCCcc-ccccHHHHHHHHHHHHcCCcEEEEEcCCC-cEEEeccceEEEEEeCcE--EEcCCCC
Q 020923 150 GVKVITSS-IPIK-PPQFGTVK-SVNYLPNVLSKMEAEETGAFAAIWLDGEG-FIAEGPNMNVAFVTKERL--LLMPQFD 223 (319)
Q Consensus 150 g~~l~~~~-~~~~-~~~~~~~K-t~ny~~~~~a~~~A~~~g~dd~l~ld~~g-~v~E~~~sNvffv~~~~~--l~TP~~~ 223 (319)
|+.+...+ ..|. +..+.+.| +.||+++++++.||+.+||.|+||+|.++ +|+|+++.|||| +++|. ++||+++
T Consensus 202 ~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d~~~ItEv~tmNiF~-v~~n~~elvTPp~d 280 (379)
T KOG0975|consen 202 GVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGDGGYITEVGTMNIFM-VKKNEDELVTPPLD 280 (379)
T ss_pred ceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecCCCceeeccceeEEE-EEcCceeEecCCCC
Confidence 78887664 3344 44678877 79999999999999999999999999876 999999999955 57777 9999999
Q ss_pred C-CcccHHHHHHHHHHHhhhhCC-ccceEEEEeeCHHHHhccceeeeecccCceEEEEEE---C----CEEeCCCCccHH
Q 020923 224 K-ILSGCTAKRVLTLAKALVREG-KLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW---D----EQVIGNGKEGPI 294 (319)
Q Consensus 224 ~-iL~GitR~~vl~~~~~~~~~g-~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~i---d----~~~~~~g~~g~~ 294 (319)
| |||||||+.++|+|++. | + +|+||.++++|+.+|+|+|.|+|+..|-||.+| | ...++.|+.||+
T Consensus 281 g~ILpGvTR~sileLa~~~---g~~--~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g~l 355 (379)
T KOG0975|consen 281 GTILPGVTRKSILELARDL---GEF--KVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEGPL 355 (379)
T ss_pred CcccCCccHHHHHHHHHHh---Cce--EEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCccHH
Confidence 5 99999999999999999 7 6 999999999999999999999999999999776 3 345788889999
Q ss_pred HHHHHHHHHHHHHcCC
Q 020923 295 AQALLDLILEDMQSGP 310 (319)
Q Consensus 295 ~~~L~~~~~~~i~~~~ 310 (319)
+++|++++. +||.|.
T Consensus 356 ~~~l~~~l~-~iq~g~ 370 (379)
T KOG0975|consen 356 AKKLLSTLT-DIQYGR 370 (379)
T ss_pred HHHHHHHHH-HhhcCC
Confidence 999999998 899884
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=8.9e-45 Score=324.61 Aligned_cols=224 Identities=33% Similarity=0.472 Sum_probs=178.0
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC-CCCceEEEEEeecCCCcccCCCCCCccEEEEEEEeCCCc
Q 020923 67 YELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASN-CRKGSLRYWLSAGVGDFQLSPVGCHQSTFYVIVIQDDSP 145 (319)
Q Consensus 67 ~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~-~~~~~iri~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (319)
|+|++|++||.+||+.+ +..+++.+++++.+.++++.++ ..++++|+++++|.+..+..++....+.. .....+..
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~~~~~~ir~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~ 77 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPDQGEGYIRITVTRGGGPLGGSPPENSAPPP--FSIAPPRR 77 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETSSSSSSSECSEEEEEE--EEEETCHH
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCCcCccCcccccccc--cccccccc
Confidence 78999999999999999 6668899999999999999987 67789999999997766554433222221 11111111
Q ss_pred c--c-CCCcEEEEeeeec-CCCCCCCccccccHHHHH-HHHHHHHcCCcEEEEEcCCCcEEEeccceEEEEEeCcEEEcC
Q 020923 146 F--V-SKGVKVITSSIPI-KPPQFGTVKSVNYLPNVL-SKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFVTKERLLLMP 220 (319)
Q Consensus 146 ~--~-~~g~~l~~~~~~~-~~~~~~~~Kt~ny~~~~~-a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv~~~~~l~TP 220 (319)
. . .....+.....+. ..+.++++||.||+.+.+ +.++|+++|+||+|++|++|+|+|++++|| |++++|+|+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~~~~~~~~~~~~~a~~~g~de~ll~d~~G~v~E~~~sNi-f~~~~~~~~TP 156 (231)
T PF01063_consen 78 PPPPLVGSVGVRRASPPLPRPNPLPRHKTTNRLANVLAALRAAREKGADEALLLDEDGNVTEGSTSNI-FFVKDGTLYTP 156 (231)
T ss_dssp HHEEEEEECSEECETTTSE-TTTSTTS-BSHHHHHHHHHHHHHHHTTSSEEEEEETTSBEEEESSSEE-EEEETTEEEEE
T ss_pred CCcceeeeeeEEeccccccccCCCCCeeECCcchhhHHHHHHHHhcCcchhheecCCCCcCCCCCccc-ccccCCEEEcC
Confidence 0 0 0011111111111 122479999999999999 667777899999999999999999999999 56799999999
Q ss_pred CCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECCEEeCCCCccHHHHHHH
Q 020923 221 QFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEGPIAQALL 299 (319)
Q Consensus 221 ~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g~~~~~L~ 299 (319)
+.+ |+|+||||+.++++++++ |+ +|+|+.++++||.+|||+|+|||++||+||.+||++.++ .||+|++|+
T Consensus 157 ~~~~giL~Gitr~~ll~~~~~~---g~--~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i~~~~~~---~~p~~~~L~ 228 (231)
T PF01063_consen 157 PLDSGILPGITRQLLLELAKEL---GI--PVEERPITLDDLQQADEVFLTNSLRGIRPVKSIDGRSFG---PGPITRRLQ 228 (231)
T ss_dssp SGSSSSB--HHHHHHHHHHHHT---TS--EEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEETTEEST---THHHHHHHH
T ss_pred ChhhhhccHHHHHHHHHHHHhC---CC--CcEEEEeCHHHhhhhhheEEecchhhEEEEEEECCEECC---CCHHHHHHH
Confidence 987 799999999999999998 87 999999999999999999999999999999999999997 799999999
Q ss_pred HHH
Q 020923 300 DLI 302 (319)
Q Consensus 300 ~~~ 302 (319)
++|
T Consensus 229 ~~~ 231 (231)
T PF01063_consen 229 EAY 231 (231)
T ss_dssp HHH
T ss_pred HhC
Confidence 987
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-43 Score=312.36 Aligned_cols=202 Identities=20% Similarity=0.178 Sum_probs=171.5
Q ss_pred ceeeeeeeee-CCeecChHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEEEeecCCCcccCCCCCC
Q 020923 53 HGVFDTAAIC-DGYLYELDQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCH 131 (319)
Q Consensus 53 ~gvFEt~rv~-~G~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~~~~iri~v~~g~~~~~~~~~~~~ 131 (319)
.++|||++++ +|++++|++|++||.+||+.|+++. +.+++++.+.++++++ ...+++|++++++ +
T Consensus 4 ~~lfETi~~~~~G~~~~l~~Hl~RL~~sa~~l~~~~--~~~~l~~~l~~~~~~~-~~~~~vrl~~~~~-g---------- 69 (209)
T PRK07546 4 FELIETLRWEPGAGFPRLDRHLARLERSARALGFPC--DPAAVRAKLAEAVAGA-QGPLRLRLTLARD-G---------- 69 (209)
T ss_pred ccEEEEEEEeCCCCcccHHHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHhhcc-CCCeEEEEEEcCC-C----------
Confidence 5799999999 9999999999999999999999864 4788999999988763 3456888888876 2
Q ss_pred ccEEEEEEEeCCCcccCCCcEEEEeeeecC-CCCCCCccccccHHHHHHHHHHHHcCCcEEEEEcCCCcEEEeccceEEE
Q 020923 132 QSTFYVIVIQDDSPFVSKGVKVITSSIPIK-PPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAF 210 (319)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~~~Kt~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvff 210 (319)
.+++.+.|.+......++++.+++.++. ++.+.++||+||+.+++++++|+++|+||+||+|++|+|+||+++|| |
T Consensus 70 --~~~i~~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~Kt~nr~~~v~a~~~a~~~g~de~l~l~~~G~v~E~s~~Ni-~ 146 (209)
T PRK07546 70 --RLTVETAPLPPLPPDTVWRVAIARTRLDSADPLLRYKTTRRAAYDAARAELPPAEADEVILLNERGEVCEGTITNV-F 146 (209)
T ss_pred --CEEEEEecCCCCCCCCcEEEEEcCcccCCCCcchhcccCChHHHHHHHHHHhhCCCCEEEEECCCCcEEEcCceeE-E
Confidence 1334455544322345677777766554 44677899999999999999999999999999999999999999999 5
Q ss_pred EEeCcEEE-cCCCC-CCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEE
Q 020923 211 VTKERLLL-MPQFD-KILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQW 281 (319)
Q Consensus 211 v~~~~~l~-TP~~~-~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~i 281 (319)
++++++|+ ||+++ |+|+||||+.+++. + +++|+.++++||.+|||+|+|||++||+||..|
T Consensus 147 ~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-------~---~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~~ 209 (209)
T PRK07546 147 LDRGGGMLTTPPLSCGLLPGVLRAELLDA-------G---RAREAVLTVDDLKSARAIWVGNSLRGLIRAELI 209 (209)
T ss_pred EEECCEEEECCCCcCCCCccHHHHHHHhh-------C---CeEEEEcCHHHHhhCCEEEEEccceeEEEEEEC
Confidence 56999999 99987 89999999999984 2 799999999999999999999999999999864
No 30
>PRK07101 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=254.75 Aligned_cols=184 Identities=20% Similarity=0.225 Sum_probs=144.8
Q ss_pred ceeeeeeeeeCCeecChHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHHHHHHcCCCCceEEEEEeecCCCcccCCCCCC
Q 020923 53 HGVFDTAAICDGYLYELDQHLDRIIRSASMAKIQL-PFDRKSLRRILIQTVSASNCRKGSLRYWLSAGVGDFQLSPVGCH 131 (319)
Q Consensus 53 ~gvFEt~rv~~G~~~~l~~Hl~RL~~Sa~~l~i~~-p~~~~~l~~~i~~l~~~~~~~~~~iri~v~~g~~~~~~~~~~~~ 131 (319)
.++||||++++|++++|++|++||.+||+.+++.. |++.+++.+.+.++ .++.+|+.++++.+...+.
T Consensus 3 ~~l~ETir~~~g~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~------~~~~~r~rl~~~~g~~~~~----- 71 (187)
T PRK07101 3 FPLFETIAIEDGEIQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL------QEGLVRCRIDYNAEIYQVQ----- 71 (187)
T ss_pred CcceEEEeeeCCeeccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh------cCCCEEEEEEecCCcEEEE-----
Confidence 46999999999999999999999999999998866 78888888887654 2456777777765533221
Q ss_pred ccEEEEEEEeCCCcccCCCcEEEEeeeecCCCCCCCccccccHHHHHHHHHHHHcCCcEEEEEcCCCcEEEeccceEEEE
Q 020923 132 QSTFYVIVIQDDSPFVSKGVKVITSSIPIKPPQFGTVKSVNYLPNVLSKMEAEETGAFAAIWLDGEGFIAEGPNMNVAFV 211 (319)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~Kt~ny~~~~~a~~~A~~~g~dd~l~ld~~g~v~E~~~sNvffv 211 (319)
..|.+. ...+++++..++ ....++||.||. .+....|++.|+||+||+| +|.|+||+++|| |+
T Consensus 72 -------~~~~~~-~~~~~~~~~~~~-----~~~~~~Kt~~r~--~~~~~~a~~~g~de~l~~~-~G~v~E~~~sNi-~~ 134 (187)
T PRK07101 72 -------YFPYQR-RPIRSFQPVYCD-----DIDYSLKYTDRS--ALNELFAQKGECDEIIIIK-NGLVTDTSIGNL-AF 134 (187)
T ss_pred -------EEcCCC-CCcCceEEEecC-----CcccccccCCHH--HHHHHHHHhCCCCEEEEEc-CCEEEEccceEE-EE
Confidence 122221 223467665432 124479999773 3334445678999999997 899999999999 55
Q ss_pred EeCcEEEcCCCCCCcccHHHHHHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCce
Q 020923 212 TKERLLLMPQFDKILSGCTAKRVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLV 275 (319)
Q Consensus 212 ~~~~~l~TP~~~~iL~GitR~~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi 275 (319)
+++|+|+||| .++|+||||+.+++. | +|+|+.++++||.+|||+|+|||++|.
T Consensus 135 ~~~~~~~TP~-~~~L~Gi~R~~ll~~-------~---~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 135 FDGKQWFTPK-KPLLKGTQRARLLDE-------G---KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred EECCEEEcCC-CCCccHHHHHHHHcc-------C---CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 6999999999 589999999999974 5 799999999999999999999999984
No 31
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=45.77 E-value=12 Score=33.42 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=27.5
Q ss_pred CcEEEcCCCCCCcccHHH----HHHHHHHHhhhhCCccceEEEEeeCHHHH
Q 020923 214 ERLLLMPQFDKILSGCTA----KRVLTLAKALVREGKLHGIKVGNVTVEEG 260 (319)
Q Consensus 214 ~~~l~TP~~~~iL~GitR----~~vl~~~~~~~~~g~~~~v~e~~i~~~dL 260 (319)
..+.+|||.+|.||+=|- .++|.+.+.. .+|..++.+|+
T Consensus 29 R~TYitPPG~GFlP~~TA~HHr~~il~Lv~~a--------l~ea~v~~~di 71 (336)
T KOG2708|consen 29 RHTYITPPGEGFLPRDTARHHRAWILGLVKQA--------LEEAGVTSDDI 71 (336)
T ss_pred cccccCCCCCCCCcchhHHHHHHHHHHHHHHH--------HHHcCCChhhC
Confidence 357999998899999884 4666665542 45556666665
No 32
>KOG0378 consensus 40S ribosomal protein S4 [Translation, ribosomal structure and biogenesis]
Probab=32.23 E-value=1.2e+02 Score=27.41 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=30.3
Q ss_pred cCCcEEEE-EcCCCcEEEeccceEEEEEeCcE-EEcCCC-CCCcccHH
Q 020923 186 TGAFAAIW-LDGEGFIAEGPNMNVAFVTKERL-LLMPQF-DKILSGCT 230 (319)
Q Consensus 186 ~g~dd~l~-ld~~g~v~E~~~sNvffv~~~~~-l~TP~~-~~iL~Git 230 (319)
.|+.|++. -|.+|+---+-.+|+|.+.++++ |++=|. .|+-..+.
T Consensus 202 ~G~f~vvhvkdt~gnsFatrLsNifvIgkgnKpwisLPkgkgi~~sia 249 (263)
T KOG0378|consen 202 PGSFDVVHVKDTNGNSFATRLSNIFVIGEGNKPWISLPKGKGIALSIA 249 (263)
T ss_pred CCceEEEEEEecCCcEeeeeeccEEEEecCCCccccCccccCccchhh
Confidence 46666555 58899999999999977777764 555333 35544443
No 33
>PF08222 HTH_CodY: CodY helix-turn-helix domain; InterPro: IPR013198 This family consists of the C-terminal helix-turn-helix domain found in several bacterial GTP-sensing transcriptional pleiotropic repressor CodY proteins. CodY has been found to repress the dipeptide transport operon (dpp) of Bacillus subtilis in nutrient-rich conditions []. The CodY protein also has a repressor effect on many genes in Lactococcus lactis during growth in milk [].; PDB: 2B0L_C.
Probab=30.04 E-value=83 Score=21.77 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=18.8
Q ss_pred ccHHHHHHHHHHHhhhhCCccceEEEEee
Q 020923 227 SGCTAKRVLTLAKALVREGKLHGIKVGNV 255 (319)
Q Consensus 227 ~GitR~~vl~~~~~~~~~g~~~~v~e~~i 255 (319)
.||||..+...++++.-+|+ ++.|.+
T Consensus 14 ~GiTRSvIVNALRKleSaGv---IesrSl 39 (61)
T PF08222_consen 14 VGITRSVIVNALRKLESAGV---IESRSL 39 (61)
T ss_dssp HT--HHHHHHHHHHHHHTTS---EEEEET
T ss_pred hCccHHHHHHHHHHHHhcCc---eeeccc
Confidence 48999999999998866785 667665
No 34
>COG1935 Uncharacterized conserved protein [Function unknown]
Probab=24.71 E-value=73 Score=25.24 Aligned_cols=44 Identities=16% Similarity=0.269 Sum_probs=30.5
Q ss_pred CcccHHHHHHHHHHHhhhhCCccceEEEEe----eCHHHHhccceeeeecccC
Q 020923 225 ILSGCTAKRVLTLAKALVREGKLHGIKVGN----VTVEEGKKAEEMILLGSGV 273 (319)
Q Consensus 225 iL~GitR~~vl~~~~~~~~~g~~~~v~e~~----i~~~dL~~adevfl~ns~~ 273 (319)
.|-||+|+.+-++.+. ++ -+++.|. .++.-|...|-+|+|++..
T Consensus 5 ~LtGIs~~vie~l~~~----~~-rTieiRsa~N~~tv~rl~~GDlVFlT~~~~ 52 (122)
T COG1935 5 ALTGISRRVIESLLRN----PI-RTIEIRSARNLLTVLRLHEGDLVFLTSTSL 52 (122)
T ss_pred EEechhHHHHHHHHhC----Cc-eEEEEEcccchHHhhcCCCCCEEEEehhHh
Confidence 4789999987777664 33 2455443 3566677789999998753
No 35
>PF03804 DUF325: Viral domain of unknown function; InterPro: IPR003225 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf4. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=24.68 E-value=1.1e+02 Score=21.53 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=19.9
Q ss_pred ecChHHHHHHHHHHH---------HHcCCCCCCCHHHHHHHHHHH
Q 020923 66 LYELDQHLDRIIRSA---------SMAKIQLPFDRKSLRRILIQT 101 (319)
Q Consensus 66 ~~~l~~Hl~RL~~Sa---------~~l~i~~p~~~~~l~~~i~~l 101 (319)
+..--+||.||+.-. +++++ .|.+.|.+++...
T Consensus 15 ivahi~HL~rlRaLIdgkvt~~dV~RFgf---~dRnalv~ACM~v 56 (71)
T PF03804_consen 15 IVAHIDHLTRLRALIDGKVTHADVRRFGF---LDRNALVSACMAV 56 (71)
T ss_pred hHHHHHHHHHHHHHHcCCccHhHHHHhCC---CcHHHHHHHHHhh
Confidence 344457888887642 44554 3677776666554
No 36
>PRK13674 putative GTP cyclohydrolase; Provisional
Probab=23.72 E-value=1.9e+02 Score=26.57 Aligned_cols=45 Identities=16% Similarity=0.204 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHcCCCCceEEEE
Q 020923 70 DQHLDRIIRSASMAKIQLPFDRKSLRRILIQTVSASNCRKGSLRYW 115 (319)
Q Consensus 70 ~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~~~~~~~~~~iri~ 115 (319)
--|+.||......+.-+ +++.+.+.+.+++++.......+.|++.
T Consensus 63 GiHMSR~~e~L~~~~~~-~l~~~~l~~il~~~l~~~~a~~a~v~~~ 107 (271)
T PRK13674 63 GIHMSRLYELLEEHAEQ-ELSPASLEQLLRDMLESLESRAARIEVS 107 (271)
T ss_pred ccchhHHHHHHHHhhcc-ccCHHHHHHHHHHHHHhcCCCEEEEEEE
Confidence 45999999999887533 6788999999999998776555666554
No 37
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=23.44 E-value=2.6e+02 Score=20.99 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=31.2
Q ss_pred HHHHHHHhhhhCCccceEE---------EEeeCHHHHhccceeeeecccCceEEEEEECCEEe
Q 020923 233 RVLTLAKALVREGKLHGIK---------VGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVI 286 (319)
Q Consensus 233 ~vl~~~~~~~~~g~~~~v~---------e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~~~ 286 (319)
.+-+.+++. |+ ++. +..++.+++..||-+++++.... .-..+.++++
T Consensus 20 ~L~~aa~~~---g~--~~~ve~~~~~g~~~~l~~~~i~~Ad~vi~~~~~~~--~~~rf~gk~v 75 (96)
T cd05569 20 ALEKAAKKL---GW--EIKVETQGSLGIENELTAEDIAEADAVILAADVPV--DDERFAGKRV 75 (96)
T ss_pred HHHHHHHHC---CC--eEEEEEecCcCccCcCCHHHHhhCCEEEEecCCCC--chhhhCCCeE
Confidence 344566666 87 555 45577799999999998887542 1255666554
No 38
>PF09954 DUF2188: Uncharacterized protein conserved in bacteria (DUF2188); InterPro: IPR018691 This family has no known function.
Probab=23.33 E-value=1.5e+02 Score=20.25 Aligned_cols=25 Identities=24% Similarity=0.213 Sum_probs=18.9
Q ss_pred HHHHHHHcCCcEEEEEcCCCcEEEe
Q 020923 179 SKMEAEETGAFAAIWLDGEGFIAEG 203 (319)
Q Consensus 179 a~~~A~~~g~dd~l~ld~~g~v~E~ 203 (319)
|+..|++.+--++++.+.||.|-|-
T Consensus 35 Ar~~a~~~~~~el~Ih~~dG~i~~~ 59 (62)
T PF09954_consen 35 ARELAKNQGGGELIIHGRDGKIREE 59 (62)
T ss_pred HHHHHHhCCCcEEEEECCCCeEEEe
Confidence 4455566657789999999999874
No 39
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=22.01 E-value=1.8e+02 Score=21.00 Aligned_cols=67 Identities=24% Similarity=0.230 Sum_probs=36.5
Q ss_pred EEEcCCCC-C-CcccHHHH-HHHHHHHhhhhCCccceEEEEeeCHHHHhccceeeeecccCceEEEEEECCEEeCCCCcc
Q 020923 216 LLLMPQFD-K-ILSGCTAK-RVLTLAKALVREGKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWDEQVIGNGKEG 292 (319)
Q Consensus 216 ~l~TP~~~-~-iL~GitR~-~vl~~~~~~~~~g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id~~~~~~g~~g 292 (319)
++|+|+.+ - ++++-++. ++.-+++.+ |+ +.+-..+.. .+ + .+-.|-+|+-..||..+.+ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~kv~~~L~el---gl--pye~~~~~~-----~~--~--~~P~GkVP~L~~dg~vI~e--S~ 65 (74)
T cd03079 2 ALYQPYEEEQILLPDNASCLAVQTFLKMC---NL--PFNVRCRAN-----AE--F--MSPSGKVPFIRVGNQIVSE--FG 65 (74)
T ss_pred ccccCCccCeeecCCCCCHHHHHHHHHHc---CC--CcEEEecCC-----cc--c--cCCCCcccEEEECCEEEeC--HH
Confidence 46788765 2 45454553 333355666 77 544332211 11 1 1124999999999998864 34
Q ss_pred HHHHHH
Q 020923 293 PIAQAL 298 (319)
Q Consensus 293 ~~~~~L 298 (319)
.+...|
T Consensus 66 aIl~yL 71 (74)
T cd03079 66 PIVQFV 71 (74)
T ss_pred HHHHHH
Confidence 444433
No 40
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=21.78 E-value=3e+02 Score=19.50 Aligned_cols=52 Identities=23% Similarity=0.201 Sum_probs=28.7
Q ss_pred CccceEEEEeeCHHHHhccceeeeecccCceEEEEEEC-CEEeCCCCccHHHHHHHHH
Q 020923 245 GKLHGIKVGNVTVEEGKKAEEMILLGSGVLVRPVVQWD-EQVIGNGKEGPIAQALLDL 301 (319)
Q Consensus 245 g~~~~v~e~~i~~~dL~~adevfl~ns~~gi~pV~~id-~~~~~~g~~g~~~~~L~~~ 301 (319)
|+ +.+...+...+-....+-+ -.+-.|-+|+-..+ +..+.. ...+++.|.+.
T Consensus 30 ~i--~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~e--S~aI~~yL~~~ 82 (84)
T cd03038 30 GL--EYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGD--SFAIAEYLEEA 82 (84)
T ss_pred CC--CCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeC--HHHHHHHHHHh
Confidence 76 6666655433221111112 23457899999877 676643 55666666544
Done!