Citrus Sinensis ID: 020927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCSQNS
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHccccccccEEEEccccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEEcHccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHccccccccHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEccHHHHcHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccEccccccccccHHcccHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mwrlsskgasgfsssstaeevtqgidgsgLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEfkssglplnilinnagimatpfmlskdnIELQFATNHIGHFLLTNLLLETMGKTaresskegrivnvssrrhqfsypegirfdrindqsgynrfsaygqsklanVLHTSELARRLkedgvditansvhpgaittNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVAlhphvkgltgsyfadsnvaqaSSQAVNTELAQKLWDFSSDLIYRCSQNS
Flexible Loop (DISEMBL)
mwrlsskgasgfssssTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEfkssglplNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTAresskegrivnvssrrhqfsypegirfdrinDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCSQNS
Low Complexity Region (SEG)
MWRLsskgasgfssssTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCSQNS
Disordered region (IsUnstruct)
***************************SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ*************************LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETM**********************FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRC****
Disordered Region (DISOPRED)
********ASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDL*YR*****
Disordered Region (DISEMBL)
***********************GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGK**********IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCSQNS
Disordered Region (DISPRO)
**********************QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIY******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCSQNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.978	0.987	0.722	1e-133
A2RVM0	322	Short-chain dehydrogenase	no	no	0.974	0.965	0.695	1e-127
Q9NZC7	414	WW domain-containing oxid	yes	no	0.893	0.688	0.409	1e-55
Q91WL8	414	WW domain-containing oxid	yes	no	0.896	0.690	0.401	2e-55
Q5R9W5	414	WW domain-containing oxid	yes	no	0.893	0.688	0.409	3e-55
Q5F389	414	WW domain-containing oxid	yes	no	0.893	0.688	0.412	1e-53
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.880	0.883	0.407	2e-48
Q9HBH5	336	Retinol dehydrogenase 14	no	no	0.858	0.815	0.38	2e-46
Q803A8	412	WW domain-containing oxid	no	no	0.921	0.713	0.362	1e-45
Q8BYK4	316	Retinol dehydrogenase 12	no	no	0.880	0.889	0.383	3e-45

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  474 bits (1221), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/313 (72%), Positives = 264/313 (84%), Gaps = 1/313 (0%)

Query: 1   MWRLSSK-GASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA 59
           MW  SSK G SGFS SSTAE+VT GID +GLTAIVTGASSGIG ET RVLALRG HV+M 
Sbjct: 1   MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMG 60

Query: 60  VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM 119
           VRNM A ++VK  I+K+IP+AKV A+ELDLSSL SV+KFASEF SSG PLNILINNAGIM
Sbjct: 61  VRNMVAAKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIM 120

Query: 120 ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE 179
           A PF LSKDNIELQFATNHIGHFLLTNLLL+TM KT RES KEGRIVNV+S  H+F+YPE
Sbjct: 121 ACPFKLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPE 180

Query: 180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           GIRFD+INDQS YN + AYGQSKLANVLH ++L + LKEDGV+ITANS+HPG I TNLFR
Sbjct: 181 GIRFDKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFR 240

Query: 240 NISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTE 299
           + S  +GL+ ++GK V+KNV+QGAATTCYVALHP VKG++G YF+DSNV + +    + +
Sbjct: 241 HNSAVNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVD 300

Query: 300 LAQKLWDFSSDLI 312
           LA+KLWDFS +L+
Sbjct: 301 LAKKLWDFSINLV 313

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  456 bits (1172), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/312 (69%), Positives = 261/312 (83%), Gaps = 1/312 (0%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW   SKGASGFSS STAEEVT G+DG+GLTAIVTGASSGIG ETARVL+LRGVHVVMAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RN  +  +VK+ IVK++P AK+  MELDLSS+ SVRKFASE+KS+GLPLN+LINNAGIMA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            PFMLSKDNIELQFATNH+GHFLLT LLL+TM  T+RES +EGRIVN+SS  H+FSYPEG
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           +RFD+IND+S Y+   AYGQSKL NVLH +EL ++LKEDGV+ITANS+HPGAI TNL R 
Sbjct: 181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query: 241 IS-FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTE 299
            + + +  VG + KY++K+V QGAATTCYVAL+P V G++G YF DSN+A+      +TE
Sbjct: 241 FNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTE 300

Query: 300 LAQKLWDFSSDL 311
           LA+K+WDFS+ L
Sbjct: 301 LAKKVWDFSTKL 312

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  216 bits (551), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 181/315 (57%), Gaps = 30/315 (9%)

Query: 12  FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           +  S+TA E+ QG D +G   +VTGA+SGIG ETA+  AL G HV++A RNMA   E   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE 131
            I++E   AKV+AM LDL+ L SV+ FA  FK+  +PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             F  NH+GHF L  LL + + ++A       R++ VSS  H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 192 YNRFS-------------AYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNL 237
              FS             AY +SKL N+L ++EL RRL   GV  T+N+VHPG  + +N+
Sbjct: 274 KLDFSRLSPTKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSNI 331

Query: 238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVN 297
            R+   ++ L+  L +   K+++QGAATT Y A  P ++GL G YF +      S +A +
Sbjct: 332 HRSWWVYT-LLFTLARPFTKSMQQGAATTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQS 390

Query: 298 TELAQKLWDFSSDLI 312
            E A+ LW  S  LI
Sbjct: 391 EETARTLWALSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  216 bits (549), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/314 (40%), Positives = 178/314 (56%), Gaps = 28/314 (8%)

Query: 12  FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           +  S+TA E+ QG D +G   +VTGA+SGIG ETA+  AL G HV++A RN++   E   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVS 166

Query: 72  AIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE 131
            I++E   AKV+AM LDL+ L SV+ FA  FK+  + L++L+ NAG  A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLE 226

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             F  NH+GHF L  LL + + +     S   R++ VSS  H        RF  IND SG
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCR-----SSPARVIVVSSESH--------RFTDINDSSG 273

Query: 192 -------------YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF 238
                        Y    AY +SKL N+L ++EL RRL   GV  T+N+VHPG +  +  
Sbjct: 274 KLDLSRLSPPRSDYWAMLAYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSAI 331

Query: 239 RNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNT 298
              S+   L+  L +   K+++QGAATT Y A+ P ++GL G YF +      S +A + 
Sbjct: 332 HRNSWVYKLLFTLARPFTKSMQQGAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQSE 391

Query: 299 ELAQKLWDFSSDLI 312
           E A+ LW+ S  LI
Sbjct: 392 ETARALWELSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  215 bits (548), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 181/315 (57%), Gaps = 30/315 (9%)

Query: 12  FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           +  S+TA E+ QG D +G   +VTGA+SGIG ETA+  AL G HV++A RNMA   E   
Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE 131
            I++E   AKV+A+ LDL+ L SV+ FA  FK+  +PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             F  NH+GHF L  LL + + ++A       R++ VSS  H        RF  IND  G
Sbjct: 227 TTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLG 273

Query: 192 YNRFS-------------AYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNL 237
              FS             AY +SKL NVL ++EL RRL   GV  T+N+VHPG  + +N+
Sbjct: 274 KLDFSRLSPTKNDYWAMLAYNRSKLCNVLFSNELHRRLSPRGV--TSNAVHPGNMMYSNI 331

Query: 238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVN 297
            R+   ++ L+  L +   K+++QGAATT Y A  P ++GL G YF +      S +A +
Sbjct: 332 HRSWWVYT-LLFTLARPFTKSMQQGAATTVYCAAAPELEGLGGMYFNNCCRCMPSPEAQS 390

Query: 298 TELAQKLWDFSSDLI 312
            E A+ LW  S  LI
Sbjct: 391 EETARTLWALSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 181/315 (57%), Gaps = 30/315 (9%)

Query: 12  FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           +  +STA E+ QG D SG   I+TGA+SGIG ETA+  AL G +V++A RNM+   +  +
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query: 72  AIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE 131
            I++E   AKV+AM LDL+SL SV+ FA  FKS  +PL+IL+ NA I  + + L++D +E
Sbjct: 167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             F  NH+GHF L  LL + + +     S   R+V VSS  H        RF  I D SG
Sbjct: 227 STFQVNHLGHFYLVQLLEDILRR-----SSPARVVVVSSESH--------RFTEIKDSSG 273

Query: 192 YNRFS-------------AYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNL 237
              FS             AY +SKL N+L ++EL RRL   GV  T+NSVHPG  I +++
Sbjct: 274 KLDFSLLSPSKKEYWAMLAYNRSKLCNILFSNELNRRLSPHGV--TSNSVHPGNMIYSSI 331

Query: 238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVN 297
            RN   ++ L+  L +   K+++QGAATT Y A    ++GL G YF +      S++A N
Sbjct: 332 HRNWWVYT-LLFTLARPFTKSMQQGAATTVYCATAAELEGLGGMYFNNCCRCLPSAEARN 390

Query: 298 TELAQKLWDFSSDLI 312
              A  LW+ S  LI
Sbjct: 391 ELTAVALWELSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  193 bits (490), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/292 (40%), Positives = 163/292 (55%), Gaps = 11/292 (3%)

Query: 21  VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA 80
            T  +   G   +VTGA++GIG ETA+ LA RG  V +A R++     V K I     N 
Sbjct: 33  CTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQ 92

Query: 81  KVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIG 140
           +V   +LDLS   S+R FA  F +    L++LINNAG+M  P+  + D  E+    NH+G
Sbjct: 93  QVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLG 152

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           HFLLT      +     + S   RIVNVSS  H       I F  +  +  YN   AY  
Sbjct: 153 HFLLT-----HLLLEKLKESAPSRIVNVSSLAHHLGR---IHFHNLQGEKFYNAGLAYCH 204

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE 260
           SKLAN+L T ELARRLK  GV  T  SVHPG + + L R+ SF   +  L   + IK  +
Sbjct: 205 SKLANILFTQELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMRWMWWLF-SFFIKTPQ 261

Query: 261 QGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
           QGA T+ + AL   ++ L+G++F+D +VA  S+QA N  +A++LWD S DL+
Sbjct: 262 QGAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/300 (38%), Positives = 164/300 (54%), Gaps = 26/300 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-------PNAK 81
           G T ++TGA+SG+G  TA  L   G  V+M  R+ A   E    + +E+       P   
Sbjct: 43  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 82  VQAM------ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA 135
           V  +      ELDL+SL SVR F  E       L++LINNAGI   P+M ++D  E+QF 
Sbjct: 103 VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
            NH+GHFLLT      +     +SS   RIV VSS+ +++     I FD +N +  YN+ 
Sbjct: 163 VNHLGHFLLT-----NLLLGLLKSSAPSRIVVVSSKLYKYG---DINFDDLNSEQSYNKS 214

Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLG 252
             Y +SKLAN+L T ELARRL  +G ++T N +HPG + TNL R+I        L  L+ 
Sbjct: 215 FCYSRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVS 272

Query: 253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
               K   +GA T+ Y+A  P V+G++G YF D    +   +A++  +A+KLWD S  ++
Sbjct: 273 WAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMV 332

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 12/306 (3%)

Query: 12  FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           +  ++ A E+  G D S    IVTGA+SGIG ETAR  AL G HV++A RN +   +   
Sbjct: 104 YDGNTGALEILHGQDLSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASKAAS 163

Query: 72  AIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE 131
            I+ E   A+V+ + LDL+SL SVR+FA  FK++ LPL++L+ NA + + P+ L++D  E
Sbjct: 164 LIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWRLTEDGFE 223

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS----YPEGIRFDRIN 187
             F   H+GHFLL       + +     S   R+V VSS  H+F+        +  D ++
Sbjct: 224 STFQICHLGHFLLV-----QLLQDVLRLSAPARVVVVSSESHRFTDLLDSCGNLDLDLLS 278

Query: 188 -DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
             Q  Y    AY ++KL N+L +SEL RR+   G  I  N++HPG++         +   
Sbjct: 279 PPQKNYWSLLAYNRAKLCNLLFSSELHRRMSPHG--ICCNALHPGSMMFTSIHRSWWLLT 336

Query: 247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWD 306
           L+  L +   K+++QGAATT Y A+ P ++G+ G YF +      S QA +   A  LW+
Sbjct: 337 LLFSLARPFTKSMQQGAATTVYCAVAPELEGIGGMYFNNCFRCLPSPQAQDPAAALSLWE 396

Query: 307 FSSDLI 312
            S  L+
Sbjct: 397 LSERLV 402

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  182 bits (462), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 160/292 (54%), Gaps = 11/292 (3%)

Query: 21  VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA 80
            T  +   G   ++TGA++GIG ETAR LA RG  V +A R++         I  +  N+
Sbjct: 31  CTTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 90

Query: 81  KVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIG 140
           +V   +LDLS   S+R FA  F +    L+ILINNAG+M  P+  + D  E  F  NH+G
Sbjct: 91  QVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLG 150

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           HFLLT      +     + S   R+VN+SS  H       IRF  +  Q  Y    AYG 
Sbjct: 151 HFLLT-----YLLLERLKESAPARVVNLSSIAHLIG---KIRFHDLQGQKRYCSAFAYGH 202

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE 260
           SKLAN+L T ELA+RL+  G  +TA +VHPG + + + RN S+   L+  L     K+  
Sbjct: 203 SKLANLLFTRELAKRLQ--GTGVTAYAVHPGVVLSEITRN-SYLLCLLWRLFSPFFKSTS 259

Query: 261 QGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
           QGA T+ + AL   ++ L+G YF+D      SS+A N + A++LW+ S +L+
Sbjct: 260 QGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
359490488	313	PREDICTED: short-chain dehydrogenase TIC	0.978	0.996	0.814	1e-147
225464515	313	PREDICTED: short-chain dehydrogenase TIC	0.978	0.996	0.775	1e-140
363814467	313	uncharacterized protein LOC100796920 [Gl	0.974	0.993	0.742	1e-137
224122322	318	predicted protein [Populus trichocarpa]	0.990	0.993	0.781	1e-136
356529180	314	PREDICTED: WW domain-containing oxidored	0.978	0.993	0.753	1e-136
359490491	313	PREDICTED: short-chain dehydrogenase TIC	0.974	0.993	0.759	1e-134
358248796	349	uncharacterized protein LOC100783465 [Gl	0.974	0.891	0.733	1e-134
388510126	313	unknown [Lotus japonicus]	0.978	0.996	0.730	1e-134
449456311	319	PREDICTED: short-chain dehydrogenase TIC	0.978	0.978	0.762	1e-134
255537499	315	short-chain dehydrogenase, putative [Ric	0.974	0.987	0.736	1e-133

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/312 (81%), Positives = 278/312 (89%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW     GASGFS+SSTA EVT GIDG+GLTAIVTGASSGIGTETARVLALRGVHVVMAV
Sbjct: 1   MWWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNMAA REVK+AI KEIP AK+ AMELDLSS+ASVRKFASEF SSGLPLN+LINNAG+MA
Sbjct: 61  RNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           TPFMLSKDNIELQFATNHIGHFLLTNLLLETM KTARES+KEGRIVNVSSRRH+FSY EG
Sbjct: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD INDQSGYNR SAYGQSKLANVLH +EL+RRLK+DG +ITANS+HPGAI TNLFR+
Sbjct: 181 IRFDMINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIATNLFRH 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
           +    G + + GKYV+KNV+QGAATTCYVALHP VKG TG YFADSN+A+ SSQA + EL
Sbjct: 241 VPLVGGFIDIFGKYVVKNVQQGAATTCYVALHPEVKGTTGEYFADSNIAKGSSQANDPEL 300

Query: 301 AQKLWDFSSDLI 312
           A+KLWDFS  LI
Sbjct: 301 AKKLWDFSLSLI 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/312 (77%), Positives = 274/312 (87%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW  S KG SGFS+SSTAEEVTQGIDG+GLTAIVTGASSGIGTET RVLALRGVHVVM V
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNM+A +EVK+AIVKEIP AKV AMELDLSS+ASVRKFASE+ SSGLPLNILINNAGIMA
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            P+MLSKDNIE+QFATNH+GHFLLTNLLL+TM KT R+S KEGRIVNVSS  H++ Y EG
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLLTNLLLDTMKKTTRKSRKEGRIVNVSSMAHRYPYREG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD+IND+SGY+   AYGQSKLANVLH +ELARR KEDGVDITANS+HPGAI TNLFR 
Sbjct: 181 IRFDKINDKSGYSSLFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNLFRC 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S  SGLV  +GK V+KNV+QGAATTCYVALHP VKG++G YF+D N+A+ SSQA + EL
Sbjct: 241 SSIVSGLVNTVGKLVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPSSQAKDPEL 300

Query: 301 AQKLWDFSSDLI 312
           A+KLW+FS +L+
Sbjct: 301 AKKLWEFSMNLV 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814467|ref|NP_001242868.1| uncharacterized protein LOC100796920 [Glycine max] gi|255638702|gb|ACU19656.1| unknown [Glycine max]

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/311 (74%), Positives = 273/311 (87%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW    KGASGFSSSSTAE+VT+GIDG+G TAIVTGASSGIGTET RVLALRGVHV+M V
Sbjct: 1   MWLFGRKGASGFSSSSTAEQVTEGIDGTGFTAIVTGASSGIGTETTRVLALRGVHVIMGV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNM A ++VK+ I+KEIP+AKV AMELDLSS+ SVRKFASEFKSSGLPLNILINNAGIMA
Sbjct: 61  RNMLAAKDVKETILKEIPSAKVDAMELDLSSMKSVRKFASEFKSSGLPLNILINNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            PF LSKD IELQFATNHIGHFLLTNLLL+T+ KT+RES KEGRIVNVSS  H+F+Y EG
Sbjct: 121 CPFSLSKDKIELQFATNHIGHFLLTNLLLDTIKKTSRESKKEGRIVNVSSEAHRFAYSEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           I FD+IND+S Y+ + AYGQSKLAN+LH +EL RRLKEDGVDI+ANS+HPG ITTNLFR+
Sbjct: 181 ICFDKINDESSYDNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGTITTNLFRH 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S  +GL+ ++G+ V+KNV+QGAATTCYVALHP VKG++G YF+DSN+A+ ++Q  +++L
Sbjct: 241 NSAVNGLINVIGRLVLKNVQQGAATTCYVALHPQVKGISGKYFSDSNLAKTTAQGTDSDL 300

Query: 301 AQKLWDFSSDL 311
           A+KLWDFS DL
Sbjct: 301 AKKLWDFSMDL 311

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122322|ref|XP_002318806.1| predicted protein [Populus trichocarpa] gi|222859479|gb|EEE97026.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/316 (78%), Positives = 279/316 (88%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW LS KG SGFS+SSTAE+VTQGIDGSGLTAIVTGASSGIG ETARVLALRGVHVVM V
Sbjct: 1   MWFLSRKGTSGFSASSTAEDVTQGIDGSGLTAIVTGASSGIGAETARVLALRGVHVVMGV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RN+ A R VK+AIVK  PNAK+ AM+LDLSS+ASV+KFA +FKS  LPLN+LINNAGIMA
Sbjct: 61  RNLEAGRAVKEAIVKGNPNAKLDAMDLDLSSMASVKKFAEDFKSLNLPLNLLINNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           TPFMLSKDNIELQFATNH+GHFLLTNLL+ET+ KTAR S KEGRIVNVSSRRH+FSYPEG
Sbjct: 121 TPFMLSKDNIELQFATNHVGHFLLTNLLMETIRKTARASRKEGRIVNVSSRRHKFSYPEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRF ++ND SGYN  SAYGQSKLAN+LH +ELAR+LKED V++TANSVHPG I TNLFR+
Sbjct: 181 IRFAKLNDPSGYNSLSAYGQSKLANILHANELARQLKEDRVEVTANSVHPGLIATNLFRH 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            SF +GLVGL+GKYVIKNV+QGAATTCYVALHP VK ++G YFADS++A+AS QA + EL
Sbjct: 241 YSFLTGLVGLVGKYVIKNVQQGAATTCYVALHPKVKAMSGQYFADSSIAKASLQANDAEL 300

Query: 301 AQKLWDFSSDLIYRCS 316
           A KLWDFS DL+ R S
Sbjct: 301 ATKLWDFSLDLVRRGS 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529180|ref|XP_003533174.1| PREDICTED: WW domain-containing oxidoreductase-like [Glycine max]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/312 (75%), Positives = 266/312 (85%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW L  KG SGFS+SSTAEEVTQGIDGS LTAIVTGA+SGIG ETAR LALRGVHVVM +
Sbjct: 1   MWWLGRKGPSGFSASSTAEEVTQGIDGSDLTAIVTGATSGIGVETARALALRGVHVVMGI 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNM A  E+K+ I++  P AK+  MELDLSS+ SVR FAS+F S GLPLNIL+NNAGIMA
Sbjct: 61  RNMTAGGEIKETILRYNPIAKIDMMELDLSSMESVRTFASQFNSRGLPLNILVNNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           TPF LSKD IELQFATNHIGHFLLTNLLLETM +TA E  KEGR+VNVSSRRH+ SYPEG
Sbjct: 121 TPFKLSKDKIELQFATNHIGHFLLTNLLLETMKRTAIEQRKEGRVVNVSSRRHKLSYPEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD+IND+SGYN  SAYGQSKLANVLHT+ELARRLKE+G +ITANSV PG I TNLFR 
Sbjct: 181 IRFDKINDKSGYNSLSAYGQSKLANVLHTNELARRLKEEGTNITANSVSPGPIATNLFRY 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S     VG+LGKY +KN++QGAATTCYVALHP VKGLTG YFADSN+A+ASSQA + E+
Sbjct: 241 HSLMEVFVGILGKYAMKNIQQGAATTCYVALHPQVKGLTGCYFADSNLAEASSQASDPEV 300

Query: 301 AQKLWDFSSDLI 312
           A+KLW++SSDL+
Sbjct: 301 ARKLWEYSSDLV 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490491|ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed protein product [Vitis vinifera]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/312 (75%), Positives = 268/312 (85%), Gaps = 1/312 (0%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW  S KGASGFS SSTAEEVTQGIDG+GLTAIVTGASSGIGTET RVLALRGVHVVM V
Sbjct: 1   MWLFSRKGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNMAA +EVK+AIVKEIP AKV  MELDLSS+ASVRKFASEF SSGLPLNILINNAG   
Sbjct: 61  RNMAAGQEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNILINNAGTTG 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            P+MLSKDNIE+ FATNH+GHFLLT+LLL+TM KT +ES KEGRIV VSS  H+F+Y  G
Sbjct: 121 -PYMLSKDNIEMLFATNHLGHFLLTSLLLDTMKKTTQESGKEGRIVIVSSEGHRFTYRGG 179

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD IND+SGY+   AYGQSKLANVLH +ELARR KEDGVDITANS+HPGAI TN+FR+
Sbjct: 180 IRFDNINDKSGYSSPFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAIVTNIFRH 239

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S  SGLV  +GKYV+KNV+QGAATTCYVALHP VKG++G YF+D N+A+  +QA + EL
Sbjct: 240 SSILSGLVNTVGKYVLKNVQQGAATTCYVALHPQVKGVSGQYFSDCNIAKPGAQAKDPEL 299

Query: 301 AQKLWDFSSDLI 312
           A+KLW+FS+ LI
Sbjct: 300 AKKLWEFSTGLI 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248796|ref|NP_001240197.1| uncharacterized protein LOC100783465 [Glycine max] gi|255644813|gb|ACU22908.1| unknown [Glycine max]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/311 (73%), Positives = 268/311 (86%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW  S KGASGFSSSSTAE+VT+GIDG+GLTAIVTGASSGIGTET RVL+LRGVHV+M V
Sbjct: 37  MWPFSRKGASGFSSSSTAEQVTEGIDGTGLTAIVTGASSGIGTETTRVLSLRGVHVIMGV 96

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RNM A ++VK+ ++KEIP+AKV AMELDLSSL SV+KFASEFKSSGLPLN+LINNAGIMA
Sbjct: 97  RNMLAAKDVKETLLKEIPSAKVDAMELDLSSLESVKKFASEFKSSGLPLNMLINNAGIMA 156

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            PF LSKD IELQFATNH+GHFLLTNLLL+TM KT+RE+ KEGRIVNVSS  H+F+Y EG
Sbjct: 157 CPFKLSKDKIELQFATNHLGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFTYSEG 216

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD+IND+S Y+ + AYGQSKLAN+LH +EL RRLKEDGVDI+ANS+HPG I TNL R+
Sbjct: 217 IRFDKINDESSYSNWRAYGQSKLANILHANELTRRLKEDGVDISANSLHPGVIATNLSRH 276

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
           IS  +GL   + + V+KNV+QGAATTCYVALHP VKG +G YF+ SNVA+ +SQ  + +L
Sbjct: 277 ISPVNGLTKAIARLVLKNVQQGAATTCYVALHPQVKGTSGKYFSASNVAKTTSQGTDADL 336

Query: 301 AQKLWDFSSDL 311
           A+ LWDFS DL
Sbjct: 337 AKNLWDFSMDL 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510126|gb|AFK43129.1| unknown [Lotus japonicus]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/312 (73%), Positives = 269/312 (86%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW  S KG SGFSSSSTAE+VTQGIDG+GLTA+VTGASSGIGTET RVLA RGVHV+M V
Sbjct: 1   MWPFSKKGPSGFSSSSTAEQVTQGIDGTGLTAVVTGASSGIGTETTRVLAKRGVHVIMGV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RN AA ++VK+ I+KE P+AKV AMELDLSS+ SV+KFASE+KSSGLPLNILINNAGIMA
Sbjct: 61  RNTAAGKDVKETILKENPSAKVDAMELDLSSMESVKKFASEYKSSGLPLNILINNAGIMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
            PFMLSKDN ELQFATNH+GHFLLTNLLL+TM KT+RES KEGRIV VSS  H+F+Y EG
Sbjct: 121 CPFMLSKDNHELQFATNHLGHFLLTNLLLDTMKKTSRESKKEGRIVIVSSEAHRFAYSEG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD+INDQS YN + AYGQSKLAN+LH +EL + LKEDGVDITANS+HPG ITTNLFR 
Sbjct: 181 IRFDKINDQSSYNNWRAYGQSKLANILHANELTKHLKEDGVDITANSLHPGTITTNLFRY 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S  +G++ ++G+ V+KNV+QGAATTCYVALHP VKG++G YF+DSNV++ +    + +L
Sbjct: 241 NSAVNGIINVVGRMVMKNVQQGAATTCYVALHPEVKGVSGKYFSDSNVSKTTPHGTDADL 300

Query: 301 AQKLWDFSSDLI 312
           A+KLWDFS +LI
Sbjct: 301 AKKLWDFSMNLI 312

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456311|ref|XP_004145893.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/312 (76%), Positives = 279/312 (89%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW +S KG SGFS+SSTAEEVTQGI+G+GLTAIVTGASSGIGTETARVLALRGVHVVMAV
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RN+A  REV++AI+KE P AKV  MELDLSS+ASVR FAS FKSSGLPLNIL+NNAG+MA
Sbjct: 61  RNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASNFKSSGLPLNILVNNAGVMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           +PF+LSKD IELQFATNH+GHFLLTNLLLET+ KTA+ S +EGRIVNVSSRRHQFSY EG
Sbjct: 121 SPFLLSKDKIELQFATNHVGHFLLTNLLLETLKKTAKNSEREGRIVNVSSRRHQFSYREG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD+INDQSGYN  SAYGQSKLAN+LH SELAR+LKE+GV ITANS+HPGAI TNLFR 
Sbjct: 181 IRFDKINDQSGYNGLSAYGQSKLANILHASELARQLKEEGVKITANSLHPGAIPTNLFRY 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            +  +G +G+LGK+V+KNV+QGAATTCYVALH  + G++G YFADSN+A+A+SQA ++EL
Sbjct: 241 HNLINGFLGVLGKHVMKNVQQGAATTCYVALHQQINGISGQYFADSNIAKANSQANDSEL 300

Query: 301 AQKLWDFSSDLI 312
           A++LWDF+  L+
Sbjct: 301 AKRLWDFTQKLV 312

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537499|ref|XP_002509816.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223549715|gb|EEF51203.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/311 (73%), Positives = 268/311 (86%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           MW    KG SGFS++STAE+VTQGIDG+GLTAIVTGASSGIG ETARVLALR VHVVMAV
Sbjct: 1   MWIFGWKGPSGFSANSTAEQVTQGIDGTGLTAIVTGASSGIGVETARVLALRDVHVVMAV 60

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           RN+ A R VK++I+KEIP AK+  M+ DLSS+ASVRKFASE+ SSGLPLN+LINNAG+MA
Sbjct: 61  RNVDAGRNVKESILKEIPTAKIDVMQFDLSSMASVRKFASEYISSGLPLNLLINNAGVMA 120

Query: 121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           TPFMLS+DNIE QFATNH+GHFLLT+LLLETM  TARESS+EGRIVNVSS  H+F+Y EG
Sbjct: 121 TPFMLSQDNIERQFATNHVGHFLLTDLLLETMKNTARESSREGRIVNVSSAGHRFTYREG 180

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           IRFD++ND++GYN   AYGQSKLAN+LH  ELARRLKEDGVDI+ NS+HPGAI TNL R 
Sbjct: 181 IRFDKLNDEAGYNSILAYGQSKLANILHAGELARRLKEDGVDISVNSLHPGAIDTNLLRY 240

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
            S  +G+V L+ KYVIKNV+QGAATTCYVALHP VKG+TG YF+DSN+A  +SQA + +L
Sbjct: 241 HSVINGIVSLVAKYVIKNVQQGAATTCYVALHPQVKGVTGEYFSDSNIATPTSQAKDADL 300

Query: 301 AQKLWDFSSDL 311
           A++LWDFS  L
Sbjct: 301 AKRLWDFSVRL 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.974	0.965	0.663	1e-107
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.965	0.971	0.639	1.3e-102
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.949	0.915	0.590	1.9e-90
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.927	0.922	0.584	3.2e-88
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.949	0.912	0.477	1.9e-67
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.931	0.876	0.485	1.5e-65
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.924	0.883	0.474	2.6e-63
FB|FBgn0033204	300	CG2065 [Drosophila melanogaste	0.865	0.92	0.446	8.9e-54
FB|FBgn0050491	331	CG30491 [Drosophila melanogast	0.874	0.842	0.431	3e-53
FB|FBgn0033205	330	CG2064 [Drosophila melanogaste	0.858	0.830	0.449	3.8e-53

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
 Identities = 207/312 (66%), Positives = 251/312 (80%)

Query:     1 MWRLXXXXXXXXXXXXTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
             MW              TAEEVT G+DG+GLTAIVTGASSGIG ETARVL+LRGVHVVMAV
Sbjct:     1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query:    61 RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
             RN  +  +VK+ IVK++P AK+  MELDLSS+ SVRKFASE+KS+GLPLN+LINNAGIMA
Sbjct:    61 RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query:   121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
              PFMLSKDNIELQFATNH+GHFLLT LLL+TM  T+RES +EGRIVN+SS  H+FSYPEG
Sbjct:   121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query:   181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             +RFD+IND+S Y+   AYGQSKL NVLH +EL ++LKEDGV+ITANS+HPGAI TNL R 
Sbjct:   181 VRFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRY 240

Query:   241 IS-FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTE 299
              + + +  VG + KY++K+V QGAATTCYVAL+P V G++G YF DSN+A+      +TE
Sbjct:   241 FNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTE 300

Query:   300 LAQKLWDFSSDL 311
             LA+K+WDFS+ L
Sbjct:   301 LAKKVWDFSTKL 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
 Identities = 197/308 (63%), Positives = 240/308 (77%)

Query:     1 MWRLXXXXXXXXXXXXTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
             MW              TAEEVT GIDG+GLTAIVTGASSGIG ET RVLALRGVHVVMAV
Sbjct:     1 MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

Query:    61 RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
             RN  +  +V+  I+KEIP AK+  M+LDLSS+ASVR FASE++S  LPLN+LINNAGIMA
Sbjct:    61 RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMA 120

Query:   121 TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
              PF+LS DNIELQFATNH+GHFLLTNLLLE M KTA ES++EGRIV VSS  H+F+Y EG
Sbjct:   121 CPFLLSSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREG 180

Query:   181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             ++FD+IND++ YN   AYGQSKL N+LH +ELAR  KE GV+ITANS+HPG+I TNL R 
Sbjct:   181 VQFDKINDEARYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRY 240

Query:   241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL 300
              SF + +   +GKYV+K++ QGAATTCY ALHP  KG++G Y  D+N++  +SQ  + +L
Sbjct:   241 HSFINTIGNAVGKYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKDL 300

Query:   301 AQKLWDFS 308
             A+KLW+FS
Sbjct:   301 AKKLWEFS 308

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
 Identities = 179/303 (59%), Positives = 222/303 (73%)

Query:    17 TAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE 76
             TAEEVTQGID + LTAI+TG + GIG ETARVL+ RG HVV+  RNM A    K  I+++
Sbjct:    21 TAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGAAENAKTEILRQ 80

Query:    77 IPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT 136
               NA+V  ++LDLSS+ S++ F  EF +  LPLN+LINNAG+M  P+ LS+D IELQFAT
Sbjct:    81 NANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQLSEDGIELQFAT 140

Query:   137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
             NHIGHFLLTNLLL+TM  TA+ S  EGRI+NVSS  H ++Y EGI+FD IND   Y+   
Sbjct:   141 NHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDSINDICSYSDKR 200

Query:   197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVI 256
             AYGQSKLAN+LH +EL+R+L+E+GV+ITANSVHPG I TNLF++ +     +     Y+ 
Sbjct:   201 AYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQHTALLMRFLKFFSFYLW 260

Query:   257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRCS 316
             KN+ QGAATTCYVALHP VKG+TG YFAD N    S  A +  LAQKLWDFS  LI   S
Sbjct:   261 KNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETLAQKLWDFSVKLINSVS 320

Query:   317 QNS 319
             + +
Sbjct:   321 KKN 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 881 (315.2 bits), Expect = 3.2e-88, P = 3.2e-88
 Identities = 173/296 (58%), Positives = 218/296 (73%)

Query:    17 TAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE 76
             TAE+VTQ ID S LTAI+TG +SGIG E ARVLA+RG HV++A RN  A  E K+ I++ 
Sbjct:    21 TAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKAANESKEMILQM 80

Query:    77 IPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT 136
              PNA+V  +++D+SS+ SVR F  +F +  +PLNILINNAG+M  PF L++D IE QFAT
Sbjct:    81 NPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKLTEDGIESQFAT 140

Query:   137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
             NHIGHFLLTNLLL+ M  TARES  +GRIVN+SS  H ++Y EGI+F  IND +GY+   
Sbjct:   141 NHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQGINDPAGYSERR 200

Query:   197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVI 256
             AYGQSKL+N+LH++ L+RRL+E+GV+IT NSVHPG +TTNLFR   F   +   +     
Sbjct:   201 AYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLVTTNLFRYSGFSMKVFRAMTFLFW 260

Query:   257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
             KN+ QGAATTCYVALHP ++G+TG YF D N+   S  A N  LA KLWDFS  LI
Sbjct:   261 KNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLADKLWDFSVFLI 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 146/306 (47%), Positives = 197/306 (64%)

Query:    17 TAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE 76
             TAEEVT+  D   +TA++TGA+SGIG ETARVLA RG  ++   RN+ A  E K+ IV E
Sbjct:    22 TAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSE 81

Query:    77 IPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT 136
              P  ++  M+LDLSS+ASVR F ++F+S  LPLN+LINNAG +A    +S+D IE+ FAT
Sbjct:    82 FPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFAT 141

Query:   137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG--YNR 194
             N++GHFLLTNLLL  M +TA E+  +GRIVNV+S  H +   + I + R+  Q    ++ 
Sbjct:   142 NYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGWFSGDLIEYLRLISQPKCQFDA 201

Query:   195 FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVGLLGK 253
               AY  SKLANVLHT EL+ RL++ G ++T N VHPG + T L R+     + LV  L  
Sbjct:   202 TRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGVVRTRLTRDREGLLTDLVFFLAS 261

Query:   254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIY 313
              ++K V Q AATTCYVA +P +  ++G YF D N    S    N+  A KLW  S  L+ 
Sbjct:   262 KLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTPSGLGTNSSEATKLWAASEILVT 321

Query:   314 RCSQNS 319
             + S+ S
Sbjct:   322 QHSKTS 327

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 146/301 (48%), Positives = 196/301 (65%)

Query:    17 TAEEVTQG--IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIV 74
             TAE+VTQ      S LTAI+TG +SGIG ETARVLA RGV VVMAVR+M     VK+ I+
Sbjct:    22 TAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERII 81

Query:    75 KEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQF 134
             +E P A +   E+DLSSL+SV +F S+F S  LPLNILINNAG+ +     S++ IEL F
Sbjct:    82 RENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELTF 141

Query:   135 ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI-NDQSGYN 193
             ATN +GH+LLT +L+E M  TA +S  EGRI+N+SS  H +  P+   F ++ +  S YN
Sbjct:   142 ATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPKLLHPISRYN 201

Query:   194 RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR-NISFFSGLVGLLG 252
                AY QSKLA +LH   L+++LK+   ++T N+VHPG + T + R +   F+  + L+ 
Sbjct:   202 GTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGIVKTGIIRAHKGLFTDSLFLIA 261

Query:   253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
               ++K++ QGAATTCYVAL    KGL+G YFAD N    S  A +  +A KL   S  LI
Sbjct:   262 SKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETNCSDLANDEYVALKLCTQSRALI 321

Query:   313 Y 313
             +
Sbjct:   322 H 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 142/299 (47%), Positives = 193/299 (64%)

Query:    17 TAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE 76
             TA+ VT   D   LTAI+TGA+SGIG ETARVLA RG  +V+  R++    E K  I+ E
Sbjct:    22 TADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARSVKTAEETKARILSE 81

Query:    77 IPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT 136
              P+A++  M LDLSSL SVR+F  +F+S  LPLNILINNAG  A    LS+D +E+ FAT
Sbjct:    82 FPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHKHALSEDGVEMTFAT 141

Query:   137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF--DRINDQSGYNR 194
             N++GHFLLT LLL+ M +TA ++  +GRIVNV+S  H +   + +++  D   +   Y+ 
Sbjct:   142 NYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHSWFSGDMLQYLADISRNNRNYDA 201

Query:   195 FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVGLLGK 253
               AY  SKLANVLHT EL+R L +   ++TAN VHPG + T L R+     + LV  L  
Sbjct:   202 TRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGIVKTRLTRDREGVVTDLVFFLTS 261

Query:   254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
              ++K+V Q AATTCYVA  P ++ + G YF+D N A++S        AQ+LW  +SDL+
Sbjct:   262 KLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEARSSKSGSCNLKAQRLWT-ASDLL 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

FB|FBgn0033204 CG2065 [Drosophila melanogaster (taxid:7227)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 130/291 (44%), Positives = 176/291 (60%)

Query:    20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN 79
             + T+  D +G   IVTGA++GIG ET   +A RG  V MA R+M  C + ++ I++E  N
Sbjct:     5 QFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNN 64

Query:    80 AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHI 139
               + + ELDLSSL S+RKFA+ FK     L++LINNAG+M  P  L+KD  E+Q   NH+
Sbjct:    65 QNIFSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHM 124

Query:   140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             GHFLLT+LLL+ + KTA       RIVNVSS  H   +   I+   +N +  Y+R  AY 
Sbjct:   125 GHFLLTHLLLDVLKKTA-----PSRIVNVSSLVHTQGF---IKTADLNSEKSYSRIGAYS 176

Query:   200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG-LVGLLGK---YV 255
             QSKLANVL T ELA+RL  +G  +T NS+HPGA+ T L RN  F       LL K   +V
Sbjct:   177 QSKLANVLFTRELAKRL--EGTGVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWV 234

Query:   256 I-KNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLW 305
             + K    GA TT Y AL P +K ++G YF+D    + S+ A + +  + LW
Sbjct:   235 LFKTPRNGAQTTLYAALDPALKDVSGLYFSDCQPKEVSAAAQDDKTGKFLW 285

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

FB|FBgn0050491 CG30491 [Drosophila melanogaster (taxid:7227)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 127/294 (43%), Positives = 175/294 (59%)

Query:    20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN 79
             + T+  + +G   IVTGA++GIG ET R +A RG  V MA RN+  C E ++ IV E  N
Sbjct:    36 QFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKN 95

Query:    80 AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHI 139
               V   + DL+S  S+R F + FK     L++LINNAG+M  P  L+ D IELQ   NH+
Sbjct:    96 KYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGIELQLGVNHM 155

Query:   140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             GHFLLTNLLL+ + K     S   RIVNVSS  H  +  E I    +N    Y+   AY 
Sbjct:   156 GHFLLTNLLLDLLKK-----SSPSRIVNVSSLAH--TRGE-INTGDLNSDKSYDEGKAYS 207

Query:   200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL-VGLLGKYV--- 255
             QSKLANVL T ELA+RL  +G ++TAN++HPG + T + R++ FF+    GL  K +   
Sbjct:   208 QSKLANVLFTRELAKRL--EGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWP 265

Query:   256 -IKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFS 308
              +K    GA T+ YVAL P ++ +TG YF+D  + + +  A +T+ A+ LW  S
Sbjct:   266 FVKTPRNGAQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVS 319

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

FB|FBgn0033205 CG2064 [Drosophila melanogaster (taxid:7227)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 130/289 (44%), Positives = 174/289 (60%)

Query:    22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK 81
             T+  D +G   IVTGA++GIG ETA  +A RG  V +A R+M  C + +K I+KE  N  
Sbjct:    36 TKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQN 95

Query:    82 VQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGH 141
             + + ELDLSSL S+RKF   FK     L++LINNAG+M  P  L+KD  ELQ   NHIGH
Sbjct:    96 IFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGH 155

Query:   142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
             FLLTNLLL+ +     ++S   RIV VSS  H       I    +N +  Y+   AY QS
Sbjct:   156 FLLTNLLLDVL-----KNSAPSRIVVVSSLAHARG---SINVADLNSEKSYDEGLAYSQS 207

Query:   202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-SGLVGLLGKYVI---- 256
             KLANVL T ELA+RL+  GV  T N++HPG + T L RN +FF + LV    K +I    
Sbjct:   208 KLANVLFTRELAKRLEGSGV--TVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLL 265

Query:   257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLW 305
             K  + GA T+ Y AL P +K ++G YF+D      +S A++ ++A+ LW
Sbjct:   266 KTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLW 314

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.7220	0.9780	0.9873	N/A	no
O74959	YJCD_SCHPO	1, ., -, ., -, ., -	0.3807	0.8840	0.8318	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037683001 SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_91, whole genome shotgun sequence); (313 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-108
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	9e-91
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-87
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	8e-87
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	1e-70
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	2e-55
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	5e-52
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	8e-45
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	3e-43
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	4e-42
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-38
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-37
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-34
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	8e-28
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-27
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-25
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-24
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-24
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-23
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-23
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-22
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-21
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-21
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	3e-20
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-19
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-19
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-19
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	5e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-18
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	6e-18
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-18
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-18
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-17
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	5e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-17
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-16
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-16
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-16
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-16
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-16
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-15
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-15
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-15
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-15
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	5e-15
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	5e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	8e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-14
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-14
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-14
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-14
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-14
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	5e-14
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-13
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-13
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-13
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-13
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-13
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	4e-13
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	6e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	6e-13
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-13
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	9e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-12
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-12
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-12
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-12
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-12
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-12
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	4e-12
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	7e-12
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	8e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-12
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-11
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-11
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-11
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-11
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-11
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-11
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-11
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-11
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-11
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-11
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	5e-11
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-11
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	7e-11
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	8e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	9e-11
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	9e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-10
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-10
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-10
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-10
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-10
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-10
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-10
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-10
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-10
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-10
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-10
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-10
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-10
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-10
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-10
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-10
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	6e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	7e-10
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-09
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-09
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-09
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-09
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-09
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-09
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	4e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-08
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-08
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-08
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-08
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-08
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-08
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	4e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	5e-08
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-08
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	7e-08
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-07
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-07
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-07
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-07
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-07
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-07
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-07
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-07
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-07
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	5e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	5e-07
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-06
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-06
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-06
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-06
pfam08659	181	pfam08659, KR, KR domain	2e-06
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-06
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-06
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-06
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	4e-06
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	9e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	9e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-05
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-05
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-05
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-05
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	2e-05
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-05
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-05
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	5e-05
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-05
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	7e-05
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	7e-05
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-04
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	2e-04
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-04
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	5e-04
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	0.001
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	0.002
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	0.002
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.002
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	0.002
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.003
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	0.003
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	0.004
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.004
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  316 bits (812), Expect = e-108
 Identities = 138/277 (49%), Positives = 179/277 (64%), Gaps = 8/277 (2%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G   ++TGA+SGIG ETAR LA RG HV++A RN     E    I KE  NAKV+ ++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           LSSLASVR+FA EF +    L+ILINNAGIMA P  L+KD  ELQFA N++GHFLLTNLL
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLL 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  +  +A       RIVNVSS  H+   P       + +   Y+ + AYGQSKLAN+L 
Sbjct: 121 LPVLKASA-----PSRIVNVSSIAHRAG-PIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCY 268
           T ELARRL+  G  +T N++HPG + T L R    F  L  LL  ++ K+ EQGA T  Y
Sbjct: 175 TRELARRLEGTG--VTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALY 232

Query: 269 VALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLW 305
            A  P ++G++G YF+D  +  +SS+A++ ELA+KLW
Sbjct: 233 AATSPELEGVSGKYFSDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  271 bits (694), Expect = 9e-91
 Identities = 127/284 (44%), Positives = 178/284 (62%), Gaps = 14/284 (4%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G T I+TGA++GIG ETAR LA RG  V+MA R+MA C E    I ++  N +V    LD
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           L+SL S+R FA+EF +    L++LINNAG+M  P+  ++D  E+QF  NH+GHFLLTNLL
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLL 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L+ + K+A       RIVNVSS  H+      I FD +N +  YN   AY QSKLANVL 
Sbjct: 121 LDLLKKSA-----PSRIVNVSSLAHKAGK---INFDDLNSEKSYNTGFAYCQSKLANVLF 172

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLGKYVIKNVEQGAA 264
           T ELARRL+  G  +T N++HPG + T L R+        S L+  L    +K   +GA 
Sbjct: 173 TRELARRLQ--GTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQ 230

Query: 265 TTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFS 308
           T+ Y+AL   ++G++G YF+D  + + + +A++ E A++LW+ S
Sbjct: 231 TSIYLALAEELEGVSGKYFSDCKLKEPAPEAMDEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  263 bits (675), Expect = 3e-87
 Identities = 120/296 (40%), Positives = 163/296 (55%), Gaps = 19/296 (6%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D SG  A+VTGA++G+G ETA  LA +G HVV+AVRN+   +     I    P A V   
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLT 145
           ELDL+SLASVR  A   +++   +++LINNAG+M TP   + D  ELQF TNH+GHF LT
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALT 132

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            LLL+ +       S   R+V VSS  H+      I FD +  +  YNR +AYGQSKLAN
Sbjct: 133 GLLLDRLLPV--PGS---RVVTVSSGGHRIR--AAIHFDDLQWERRYNRVAAYGQSKLAN 185

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLGKYVIKNVEQGAA 264
           +L T EL RRL   G    A + HPG   T L RN+      +  +L   + ++ E GA 
Sbjct: 186 LLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGAL 245

Query: 265 TTCYVALHPHVKGLTGSYFADSN---------VAQASSQAVNTELAQKLWDFSSDL 311
            T   A  P V+G  G Y+             V  +S+Q+ + +L ++LW  S +L
Sbjct: 246 PTLRAATDPAVRG--GQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEEL 299

Length = 306

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  263 bits (673), Expect = 8e-87
 Identities = 130/319 (40%), Positives = 168/319 (52%), Gaps = 33/319 (10%)

Query: 10  SGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV 69
           SGF ++STAEEV  G D SG TAIVTG  SG+G ET R LA  G HV++  R     RE 
Sbjct: 7   SGFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA 66

Query: 70  KKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDN 129
               +  I   +V    LDL+ L SVR FA  F  SG  ++ILINNAG+MA P     D 
Sbjct: 67  ----LAGIDGVEVV--MLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG 120

Query: 130 IELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
            E QFATNH+GHF L NLL   +   A       R+V +SS  H+ S    IR+D  +  
Sbjct: 121 WEAQFATNHLGHFALVNLLWPALAAGA-----GARVVALSSAGHRRS---PIRWDDPHFT 172

Query: 190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFS 245
            GY+++ AYGQSK AN L    L +  K+ GV   A SVHPG I T L R++        
Sbjct: 173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGV--RAFSVHPGGILTPLQRHLPREEQVAL 230

Query: 246 GLVGLLGKYV---IKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQ-------- 294
           G V   G  +    K   QGAAT  + A  P + G+ G Y  D ++A+ + +        
Sbjct: 231 GWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVR 290

Query: 295 --AVNTELAQKLWDFSSDL 311
             A++ E A +LW  S+ L
Sbjct: 291 PHAIDPEAAARLWALSAAL 309

Length = 315

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  220 bits (562), Expect = 1e-70
 Identities = 117/298 (39%), Positives = 167/298 (56%), Gaps = 30/298 (10%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G   I+TGA+SGIG ETAR  AL G HV++A RNM+        I++E   A+V+AM LD
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           L+SL SV++FA  FK+   PL++L+ NA + A P+ L++D +E  F  NH+GHF L  LL
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLL 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS------------ 196
                +     S   R++ VSS  H        RF  + D  G   FS            
Sbjct: 121 -----EDVLRRSAPARVIVVSSESH--------RFTDLPDSCGNLDFSLLSPPKKKYWSM 167

Query: 197 -AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGA-ITTNLFRNISFFSGLVGLLGKY 254
            AY ++KL N+L ++EL RRL   G  IT+NS+HPG  + +++ RN   ++ L  L   +
Sbjct: 168 LAYNRAKLCNILFSNELHRRLSPRG--ITSNSLHPGNMMYSSIHRNWWVYTLLFTLARPF 225

Query: 255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 312
             K+++QGAATT Y A  P ++GL G YF +      S +A +   AQ+LW+ S  LI
Sbjct: 226 T-KSMQQGAATTVYCATAPELEGLGGMYFNNCFRCLPSPEAQSEATAQQLWELSERLI 282

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  182 bits (463), Expect = 2e-55
 Identities = 106/314 (33%), Positives = 150/314 (47%), Gaps = 39/314 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           T ++TGASSG+G   A+ LA RG  HVVMA R+     +  + +   +P      +  DL
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTN 146
           +SL SVR+F   F+ +G PL+ L+ NA +    A     + D  EL    NH+GHFLLTN
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTN 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI------------------RFDRIND 188
           LLLE +    R  +   RIV V S  H  +   G                    F+ + D
Sbjct: 121 LLLEDL---QRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMID 177

Query: 189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRN-ISFFSG 246
              +    AY  SK+ N+L T EL RRL E    IT NS++PG I  T LFR     F  
Sbjct: 178 GGEFEGAKAYKDSKVCNMLTTYELHRRLHE-ETGITFNSLYPGCIAETGLFREHYPLFRT 236

Query: 247 LVGLLGKYVIK---NVEQGAATTCYVALHPHVKGLTGSYFADSN-----VAQASSQAVNT 298
           L     KY+ K   + E+       V   P + G++G Y++          Q+S ++ + 
Sbjct: 237 LFPPFQKYITKGYVSEEEAGERLAAVIADPSL-GVSGVYWSWGKASGSFENQSSQESSDD 295

Query: 299 ELAQKLWDFSSDLI 312
           E A+KLW+ S  L+
Sbjct: 296 EKARKLWEISEKLV 309

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  173 bits (440), Expect = 5e-52
 Identities = 109/312 (34%), Positives = 146/312 (46%), Gaps = 43/312 (13%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D SG  A+VTGAS G+G   AR LA  G  V++ VRN A       AI   +P+AK+   
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATP-FMLSKDNIELQFATNHIGHFLL 144
            LDLSSLASV     + ++ G P+++LINNAG+M  P    + D  ELQF TNH+GHF L
Sbjct: 71  ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL 130

Query: 145 TNLLLETM-GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           T  LL  +    AR +S+     ++++RR        I +D +N +  Y    AY QSK+
Sbjct: 131 TAHLLPLLRAGRARVTSQ----SSIAARRGA------INWDDLNWERSYAGMRAYSQSKI 180

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLF---------------RNISFFSGLV 248
           A  L   EL RR +  G  IT+N  HPG   TNL                R I   S   
Sbjct: 181 AVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARG 240

Query: 249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTEL-------- 300
            L+G      VE       Y A  P  +G  G+++      +     V   L        
Sbjct: 241 FLVG-----TVESAILPALYAATSPDAEG--GAFYGPRGPGELGGGPVEQALYPPLRRNA 293

Query: 301 -AQKLWDFSSDL 311
            A +LW+ S  L
Sbjct: 294 EAARLWEVSEQL 305

Length = 313

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  155 bits (393), Expect = 8e-45
 Identities = 105/326 (32%), Positives = 149/326 (45%), Gaps = 58/326 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T I+TGASSG+G   A+ LA RG HV+MA RN+       + +   IP      + +DL 
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL--GIPPDSYTIIHIDLG 65

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI----MATPFMLSKDNIELQFATNHIGHFLLTN 146
            L SVR+F  +F++ G PL+ L+ NA +    +  P + S    EL  ATNH+GHFLL N
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLGHFLLCN 124

Query: 147 LLLETMGKTARES------------SKE--GRIV--------NVSSRRHQFSYP----EG 180
           LLLE + K+                 KE  G+I         ++S     F  P    +G
Sbjct: 125 LLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADG 184

Query: 181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFR 239
            +F       G     AY  SKL N+L   EL RR  E    IT +S++PG +  T LFR
Sbjct: 185 KKFK-----PG----KAYKDSKLCNMLTMRELHRRYHES-TGITFSSLYPGCVADTPLFR 234

Query: 240 N-ISFFSGLVGLLGKYVIKN-VEQGAATT--CYVALHPHVKGLTGSYFADSN-------- 287
           N    F  L     K +    V Q  A      V   P     +G +++  N        
Sbjct: 235 NTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKA 293

Query: 288 -VAQASSQAVNTELAQKLWDFSSDLI 312
              + S +A + + A++LWD S+ L+
Sbjct: 294 FSQELSDRATDDDKARRLWDLSAKLV 319

Length = 322

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  150 bits (381), Expect = 3e-43
 Identities = 103/313 (32%), Positives = 147/313 (46%), Gaps = 37/313 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           T I+TGASSG+G   A+ LA  G  HV+MA R+     +  K++   +P      M LDL
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL--GMPKDSYTIMHLDL 62

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTN 146
            SL SVR+F  +F+ SG PL+ L+ NA +    A     + D  EL   TNH+GHFLL N
Sbjct: 63  GSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCN 122

Query: 147 LLLETMGKTARESSKEGRIV-NVSSRRHQFSYPEGIRFDRINDQSG-------------- 191
           LLL+ + K +    K   IV +++   +  +     + + + D SG              
Sbjct: 123 LLLDDL-KNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN-LGDLSGLAAGFKAPIAMIDG 180

Query: 192 --YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRN-ISFFSGL 247
             +    AY  SK+ N+L   EL RR   D   IT  S++PG I  T LFR  +  F  L
Sbjct: 181 KEFKGAKAYKDSKVCNMLTVRELHRRF-HDETGITFASLYPGCIADTGLFREHVPLFRTL 239

Query: 248 VGLLGKYVIKNV---EQGAATTCYVALHPHVKGLTGSYFADSN-----VAQASSQAVNTE 299
                KY+ K     E+       V   P +K  +G Y++  N     V Q S +  +  
Sbjct: 240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKLKK-SGVYWSWGNRQESFVNQLSEEVSDDS 298

Query: 300 LAQKLWDFSSDLI 312
            A K+WD S  L+
Sbjct: 299 KASKMWDLSEKLV 311

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  147 bits (373), Expect = 4e-42
 Identities = 107/320 (33%), Positives = 147/320 (45%), Gaps = 53/320 (16%)

Query: 33  IVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           I+TGASSG+G  TA+ LA  G  HVVMA R+        K+    +P      M LDL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA--GMPKDSYTVMHLDLAS 58

Query: 92  LASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           L SVR+F   F+ SG PL++L+ NA +    A     + D  EL   TNH+GHFLL+ LL
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLL 118

Query: 149 LETMGKTARESSKEGRIV------------NVSSR------RHQFSYPEGIRFDRINDQS 190
           L+ + K +   SK   IV            NV  +      R       G+    + D  
Sbjct: 119 LDDL-KKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG 177

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRN-ISFFSGLV 248
            ++   AY  SK+ N+L   E  RR  E+   IT  S++PG I TT LFR  I  F  L 
Sbjct: 178 EFDGAKAYKDSKVCNMLTMQEFHRRYHEE-TGITFASLYPGCIATTGLFREHIPLFRLLF 236

Query: 249 GLLGKYVIKNVEQGAATTCYVALHPHVKGL-----------TGSYFA-----DSNVAQAS 292
               KY+ K          YV+     K L           +G Y++      S   Q S
Sbjct: 237 PPFQKYITKG---------YVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLS 287

Query: 293 SQAVNTELAQKLWDFSSDLI 312
            +A + E A+K+W+ S  L+
Sbjct: 288 QEASDAEKAKKVWEISEKLV 307

Length = 308

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  134 bits (340), Expect = 5e-38
 Identities = 70/228 (30%), Positives = 91/228 (39%), Gaps = 27/228 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGASSGIG   AR LA  G  VV+A RN  A  E+      E       A++ D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAI---EALGGNAVAVQADVSD 57

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLLL 149
              V     E       L+IL+NNAGI     +  L+ ++ +     N  G FLLT   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M K        GRIVN+SS               +         +AY  SK A    T
Sbjct: 118 PHMKK-----QGGGRIVNISS---------------VAGLRPLPGQAAYAASKAALEGLT 157

Query: 210 SELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK 257
             LA  L   G  I  N+V PG + T +   +        L     + 
Sbjct: 158 RSLALELAPYG--IRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLG 203

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  132 bits (334), Expect = 3e-37
 Identities = 82/263 (31%), Positives = 113/263 (42%), Gaps = 47/263 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
            A+VTGA+ GIG E  R LA  G   V++  R++   +   + +  E     V+  +LD+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTN 146
           +  AS+   A   +     L+IL+NNAGI          +++       TN  G   +T 
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA-N 205
            LL  + K     S  GRIVNVSS     +                   SAYG SK A N
Sbjct: 120 ALLPLLKK-----SPAGRIVNVSSGLGSLT-------------------SAYGVSKAALN 155

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT 265
            L T  LA+ LKE G  I  N+  PG + T+         G          K  E+GA T
Sbjct: 156 AL-TRILAKELKETG--IKVNACCPGWVKTD-------MGGGKAP------KTPEEGAET 199

Query: 266 TCYVALHPHVKGLTGSYFADSNV 288
             Y+AL P     TG +F+D  V
Sbjct: 200 PVYLALLPPDGEPTGKFFSDKKV 222

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  124 bits (314), Expect = 4e-34
 Identities = 73/222 (32%), Positives = 99/222 (44%), Gaps = 30/222 (13%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVKEIPNAKVQ 83
           +D SG  A+VTGASSGIG   AR LA  G  VV+A R       E   A +KE    +  
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60

Query: 84  AMELDLSS-LASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHI 139
           A+  D+S    SV    +  +     ++IL+NNAGI    A    L++++ +     N +
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120

Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
           G FLLT   L  M        K+ RIVN+SS               +    G    +AY 
Sbjct: 121 GAFLLTRAALPLM--------KKQRIVNISS---------------VAGLGGPPGQAAYA 157

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            SK A +  T  LA  L   G  I  N+V PG I T +   +
Sbjct: 158 ASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAAL 197

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score =  108 bits (271), Expect = 8e-28
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 21/261 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G + ++TGA+SGIG   A  +A RG  V M  RN     E +K I  E  N  +    +D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           +S    V +F  EFK  G  L++LINNAG M     L++D +E  FATN +G ++LT  L
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHL 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG-YNRFSAYGQSKLANVL 207
           +  +     E  ++ R++ VSS        + +  + +  +   ++    Y Q+K   V+
Sbjct: 121 IPVL-----EKEEDPRVITVSSGG---MLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVI 172

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNVEQGAAT 265
            T + A++  E    I  + +HPG   T   RN    F +       K  +++ EQGA T
Sbjct: 173 MTEQWAKKHPE----IHFSVMHPGWADTPAVRNSMPDFHARF-----KDRLRSEEQGADT 223

Query: 266 TCYVAL-HPHVKGLTGSYFAD 285
             ++AL     K  +G ++ D
Sbjct: 224 VVWLALSSAAAKAPSGRFYQD 244

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  106 bits (268), Expect = 4e-27
 Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 33/214 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TA++TGASSGIG E A+ LA RG ++++  R       + K +  +    +V+ +  DLS
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVEVIPADLS 66

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLTNLL 148
              ++ +   E K  G P+++L+NNAG     PF+ LS D  E     N +    LT  +
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAV 126

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN---RFSAYGQSKLAN 205
           L  M          G I+N+ S                   +G       + Y  +K A 
Sbjct: 127 LPGM-----VERGAGHIINIGS------------------AAGLIPTPYMAVYSATK-AF 162

Query: 206 VLHTSE-LARRLKEDGVDITANSVHPGAITTNLF 238
           VL  SE L   LK  GV +TA  V PG   T  F
Sbjct: 163 VLSFSEALREELKGTGVKVTA--VCPGPTRTEFF 194

Length = 265

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 99.8 bits (250), Expect = 8e-25
 Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 26/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTGAS GIG   A  LA  G  VV+   N  A   +   +       + + +  
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVF 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S  A+VR        +   L+IL+NNAGI        +S+++ +     N  G F + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M K     ++ GRIVN+SS               ++  +G    + Y  +K   
Sbjct: 122 RAALPPMIK-----ARYGRIVNISS---------------VSGVTGNPGQTNYSAAKAGV 161

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTN 236
           +  T  LA  L   G  IT N+V PG I T+
Sbjct: 162 IGFTKALALELASRG--ITVNAVAPGFIDTD 190

Length = 246

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 98.9 bits (247), Expect = 2e-24
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 32/213 (15%)

Query: 32  AIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            ++TGAS GIG E  R L  RG   V+   R+ +A  E+          +++  +ELD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 91  SL--ASVRKFASEFKSSGLPLNILINNAGIMATPFMLS---KDNIELQFATNHIGHFLLT 145
                S    A     +G  L++LINNAGI+ +    S    +++   F  N +G  LLT
Sbjct: 58  DEIAESAEAVAERLGDAG--LDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA- 204
              L  +           +I+N+SSR              I D +    +S Y  SK A 
Sbjct: 116 QAFLPLL-----LKGARAKIINISSRVGS-----------IGDNTSGGWYS-YRASKAAL 158

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           N+L T  LA  LK DG  IT  S+HPG + T++
Sbjct: 159 NML-TKSLAVELKRDG--ITVVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.6 bits (244), Expect = 6e-24
 Identities = 66/214 (30%), Positives = 86/214 (40%), Gaps = 27/214 (12%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQA 84
              G  AIVTGAS GIG   A +LA  G  VV+A   N  A +E+ + I +E       A
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIA 59

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHF 142
           ++ D+SS   V     +       ++IL+NNAGI        ++ +  +     N  G  
Sbjct: 60  VKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           LLT   L  M        K G IVN+SS                           Y  SK
Sbjct: 120 LLTRYALPYM-----IKRKSGVIVNISSIWGLIGASCE---------------VLYSASK 159

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
            A    T  LA+ L   G  I  N+V PGAI T 
Sbjct: 160 GAVNAFTKALAKELAPSG--IRVNAVAPGAIDTE 191

Length = 247

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 96.5 bits (241), Expect = 2e-23
 Identities = 58/228 (25%), Positives = 87/228 (38%), Gaps = 33/228 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TG SSGIG   A  LA +G  V+   RN     +++        N +V  +ELD++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNP---DKLESLGELLNDNLEV--LELDVT 56

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLTNLL 148
              S++    E       +++L+NNAG     P    S + +   F  N  G   +T   
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M    R+    GRIVNVSS       P                   Y  SK A  L 
Sbjct: 117 LPLM----RK-QGSGRIVNVSSVAGLVPTP---------------FLGPYCASKAA--LE 154

Query: 209 --TSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKY 254
             +  L   L   G+ +T   + PG + T    N +  +     +  Y
Sbjct: 155 ALSESLRLELAPFGIKVT--IIEPGPVRTGFADNAAGSALEDPEISPY 200

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 95.0 bits (237), Expect = 5e-23
 Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 30/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TGASSGIG  TAR LA  G  VV+A R      E  +A+  EI      A+ L
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAARRE----ERLEALADEIGAGAALALAL 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D++  A+V             ++IL+NNAG+     +     D+ +    TN  G    T
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGT 120

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +L  M    R   K G I+N+ S   ++ YP G               + YG +K A 
Sbjct: 121 RAVLPGM--VER---KSGHIINLGSIAGRYPYPGG---------------AVYGATKAA- 159

Query: 206 VLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNISF 243
           V   S  L + L   G+ +T   + PG + T  F  + F
Sbjct: 160 VRAFSLGLRQELAGTGIRVT--VISPGLVETTEFSTVRF 196

Length = 246

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 93.8 bits (234), Expect = 2e-22
 Identities = 59/218 (27%), Positives = 85/218 (38%), Gaps = 31/218 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TG  SGIG   A   A RG  VV+   N     E     V++    KV   + D+S
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDIN-EKGAEETANNVRKA-GGKVHYYKCDVS 58

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA--TPFMLSKDNIELQFATNHIGHFLLTNLL 148
               V + A + K     + ILINNAG+++      L  + IE  F  N + HF  T   
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV-L 207
           L  M +        G IV ++S               +         + Y  SK A V  
Sbjct: 119 LPDMLER-----NHGHIVTIAS---------------VAGLISPAGLADYCASKAAAVGF 158

Query: 208 HTS---ELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           H S   EL +   + G+  T   V P  I T +F+ + 
Sbjct: 159 HESLRLEL-KAYGKPGIKTTL--VCPYFINTGMFQGVK 193

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 63/210 (30%), Positives = 85/210 (40%), Gaps = 25/210 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGA+ GIG   A  LA  G  V++            + +       K +A ++
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG--KARARQV 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+   A+++   +        L+IL+ NAGI   TPF  +  +  E     N  G FLLT
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLT 122

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  + +        GRIV  SS         G R        GY   + Y  SK   
Sbjct: 123 QAALPALIRAGG-----GRIVLTSS-------VAGPRV-------GYPGLAHYAASKAGL 163

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           V  T  LA  L      IT NSVHPG + T
Sbjct: 164 VGFTRALALELAARN--ITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 89.3 bits (222), Expect = 5e-21
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 30/221 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGAS GIG E AR LA  G  V + +RN      +  +         V+A+  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS------GGDVEAVPYDAR 55

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNLL 148
                R      +     +++L++NAGI   T     S   +E  F+ N I    LT  L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  + +        GR+V ++S               ++ +      + Y  SK A    
Sbjct: 116 LPALREAGS-----GRVVFLNS---------------LSGKRVLAGNAGYSASKFALRAL 155

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
              L +   + GV ++A  V PG + T + + ++       
Sbjct: 156 AHALRQEGWDHGVRVSA--VCPGFVDTPMAQGLTLVGAFPP 194

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 89.6 bits (223), Expect = 6e-21
 Identities = 67/212 (31%), Positives = 85/212 (40%), Gaps = 29/212 (13%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           I+TGASSGIG E A  LA  G  +V++ R      EVK     E+       + LD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSDL 65

Query: 93  ASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLTNLLLE 150
               +   E       L+ILINNAGI M + F   S D        N+ G   LT   L 
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALP 125

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT- 209
            +         +G IV VSS   +   P                 +AY  SK A  L   
Sbjct: 126 HL-----IERSQGSIVVVSSIAGKIGVP---------------FRTAYAASKHA--LQGF 163

Query: 210 -SELARRLKEDGVDITANSVHPGAITTNLFRN 240
              L   L E  + +T   V PG I TN+  N
Sbjct: 164 FDSLRAELSEPNISVT--VVCPGLIDTNIAMN 193

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 88.7 bits (221), Expect = 1e-20
 Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 29/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
            G  A+VTGAS GIG   A  LA +G +VV+   +  A  E   A+V EI     K  A+
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAE---ALVAEIGALGGKALAV 60

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFL 143
           + D+S   SV +   E K+    ++IL+NNAGI      M + +++ +    TN  G F 
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           LT  +   M K      + GRI+N+SS               +    G    + Y  SK 
Sbjct: 121 LTKAVARPMMK-----QRSGRIINISS---------------VVGLMGNPGQANYAASKA 160

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             +  T  LAR L   G  IT N+V PG I T++   + 
Sbjct: 161 GVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDALP 197

Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 65/220 (29%), Positives = 95/220 (43%), Gaps = 38/220 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGAS GIG   A  LA  G  V +  R+  A  E  + I          A+E D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLTNLL 148
              +V     + ++   P++IL+NNAGI     ++  S+++ +     N  G F +T  +
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAV 119

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA-YGQSKLANV- 206
           +  M K      + GRI+N+SS               +    G N   A Y  SK A V 
Sbjct: 120 IRAMIK-----RRSGRIINISS---------------VVGLIG-NPGQANYAASK-AGVI 157

Query: 207 -LHTS---ELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
               S   ELA R       IT N+V PG I T++   + 
Sbjct: 158 GFTKSLAKELASR------GITVNAVAPGFIDTDMTDALP 191

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 27/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
            G  A+VTGA+ G+G   A  LA  G  VV+    +  A  E+ +A+       + QA++
Sbjct: 5   MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQ 62

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLL 144
            D++  A++    +        ++IL+NNAGI        +S D  +     N  G F L
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHL 122

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              ++  M K      + GRIVN+SS         G+         G+   S Y  +K  
Sbjct: 123 LRAVVPPMRKQ-----RGGRIVNISS-------VAGLP--------GWPGRSNYAAAKAG 162

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
            V  T  LAR L E G  IT N V PG I T
Sbjct: 163 LVGLTKALARELAEYG--ITVNMVAPGDIDT 191

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 68/220 (30%), Positives = 96/220 (43%), Gaps = 39/220 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
           +G  A+VTGAS GIG   A+ LA  G  VV+    + AA  EV   I       K  A++
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAA--GGKAIAVQ 59

Query: 87  LDLSSLASVRK-FASEFKSSGLPLNILINNAGIMATPFMLSKDNIEL--QFATNHIGHFL 143
            D+S  + V + F +  K+ G  ++IL+NNAG+M    +      E    F  N  G F 
Sbjct: 60  ADVSDPSQVARLFDAAEKAFG-GVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF 118

Query: 144 LTNLLLETMGKTARESSKE----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
                        +E++K     GRI+N+SS       P                + AY 
Sbjct: 119 -----------VLQEAAKRLRDGGRIINISSSLTAAYTP---------------NYGAYA 152

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            SK A    T  LA+ L   G  IT N+V PG + T++F 
Sbjct: 153 GSKAAVEAFTRVLAKELG--GRGITVNAVAPGPVDTDMFY 190

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 84.8 bits (210), Expect = 4e-19
 Identities = 63/223 (28%), Positives = 90/223 (40%), Gaps = 38/223 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK-EIPNAKVQAME 86
           SG  AI+TG+SSGIG  TA + A  G  + +  R+     E +++ ++  +   K+  + 
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--------FATNH 138
            DL+      +  S   +    L+IL+NNAGI+A      K   E Q           N 
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILA------KGGGEDQDIEEYDKVMNLNL 115

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
                LT L +  + KT      +G IVNVSS               +     +     Y
Sbjct: 116 RAVIYLTKLAVPHLIKT------KGEIVNVSS---------------VAGGRSFPGVLYY 154

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             SK A    T   A  L   GV +  NSV PG I T   R +
Sbjct: 155 CISKAALDQFTRCTALELAPKGVRV--NSVSPGVIVTGFHRRM 195

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 5e-19
 Identities = 64/215 (29%), Positives = 91/215 (42%), Gaps = 26/215 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTGA+ G+G   A  LA  G  V       A  RE+  A+  E    +  A+  
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAA 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           DL+  ASV++F     ++   L+ L+NNAGI  +     L  D  +     N  G FL+ 
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLML 123

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  +  + R     GRIVN++S    +  P               +  AY  SK A 
Sbjct: 124 RAALPHLRDSGR-----GRIVNLASDTALWGAP---------------KLGAYVASKGAV 163

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           +  T  LAR L   G  IT N++ PG   T     
Sbjct: 164 IGMTRSLARELGGRG--ITVNAIAPGLTATEATAY 196

Length = 250

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            AIVTGASSG G  T   LA +G  V+  +RN      +     +      ++  +LD++
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              S+  F    K  G  +++L+NNAG     F+  +  +    QF TN  G   +T  +
Sbjct: 65  DQNSIHNFQLVLKEIG-RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAV 123

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M K      K G+I+N+SS               I+ + G+   S Y  SK A    
Sbjct: 124 LPYMRKQ-----KSGKIINISS---------------ISGRVGFPGLSPYVSSKYALEGF 163

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNL 237
           +  L   LK  G+D+    + PG+  TN+
Sbjct: 164 SESLRLELKPFGIDVAL--IEPGSYNTNI 190

Length = 280

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 56/217 (25%), Positives = 81/217 (37%), Gaps = 30/217 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           AI+TG +SGIG  TA++L  +G  V +  RN          +    P  K   ++ D++S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDVTS 60

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLS----KDNIELQFATNHIGHFLLTNL 147
              +     +       ++ILINNAGI+     L         E     N  G    T L
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN---RFSAYGQSKLA 204
            L  M K        G IVN+ S                   +G     +F  Y  SK  
Sbjct: 121 ALHYMDKNKGGKG--GVIVNIGS------------------VAGLYPAPQFPVYSASKHG 160

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V  T  LA  L+     +  N++ PG   T L  ++
Sbjct: 161 VVGFTRSLADLLEYK-TGVRVNAICPGFTNTPLLPDL 196

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 82.4 bits (204), Expect = 2e-18
 Identities = 50/148 (33%), Positives = 64/148 (43%), Gaps = 17/148 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G T ++TG +SGIG   AR     G  V++  R      E KK    E+PN     + L
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKK----ELPNIH--TIVL 57

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSK-----DNIELQFATNHIGHF 142
           D+    SV   A    S    L+ILINNAGI   P  L       D  + +  TN IG  
Sbjct: 58  DVGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSS 170
            L    L  +     +   E  IVNVSS
Sbjct: 117 RLIKAFLPHL-----KKQPEATIVNVSS 139

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 79.1 bits (196), Expect = 6e-18
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 16/145 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAA--CREVKKAIVKEIPNAKVQAMEL 87
           T ++TG + G+G   AR LA  G  H+V+  R   A    E+   +  E   A+V     
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL--EALGAEVTVAAC 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++   ++    +   ++  PL+ +++NAG+        L+ +  E   A    G + L 
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSS 170
            L  +            G  V  SS
Sbjct: 120 ELTRDL---------DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.0 bits (201), Expect = 7e-18
 Identities = 66/217 (30%), Positives = 85/217 (39%), Gaps = 36/217 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AIVTGASSGIG   AR  A  G  VV+  RN  A   V   I+      +  A+  
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAA 60

Query: 88  DLSSLASVRKFA----SEFKSSGLPLNILINNAGI--MATPFM-LSKDNIELQFATNHIG 140
           D+S  A V          F S    ++IL+NNAG      P + + +   +  FA N   
Sbjct: 61  DVSDEADVEAAVAAALERFGS----VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKS 116

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            +L T   +  M          G IVNV+S         G+R               Y  
Sbjct: 117 PYLWTQAAVPAM-----RGEGGGAIVNVAS-------TAGLR------PRPG--LGWYNA 156

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           SK A +  T  LA  L  D   I  N+V P  + T L
Sbjct: 157 SKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGL 191

Length = 251

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 81.7 bits (202), Expect = 8e-18
 Identities = 66/250 (26%), Positives = 100/250 (40%), Gaps = 56/250 (22%)

Query: 32  AIVTGASSGIGTETA-RVLAL----RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA-- 84
            +VTGA+SG+G     R+LA       + +++A RN+       +A++   P+A+V    
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPF--------------------- 123
           + +DLS++ SV   A E K     L+ L  NAGIM  P                      
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 124 --------MLSK------DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS 169
                   +LS+      D +   F TN  GH+ L   L   +      S    +I+  S
Sbjct: 124 TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLL----CRSDGGSQIIWTS 179

Query: 170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK-LANVLHTSELARRLKEDGVDITANSV 228
           S      Y     F  + D       + Y  SK L ++L  +   R+  + GV   +  V
Sbjct: 180 SLNASPKY-----FS-LEDIQHLKGPAPYSSSKYLVDLLSLALN-RKFNKLGVY--SYVV 230

Query: 229 HPGAITTNLF 238
           HPG  TTNL 
Sbjct: 231 HPGICTTNLT 240

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 2e-17
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 24/218 (11%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           I+  G  A+VTGASSG+G   A+VLA  G  VV+A R +   +E++  I  E   A V  
Sbjct: 5   INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV-- 62

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHF 142
           + LD++   S++   +  ++    ++IL+NN+G+  T  ++  +  + +  F TN  G F
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAF 122

Query: 143 LLTNLLLETM---GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
            +   + + M    K A  +   GRI+N++S         G+   R+  Q G      Y 
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASV-------AGL---RVLPQIG-----LYC 167

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            SK A V  T  +A      G  I  N++ PG I T +
Sbjct: 168 MSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEI 203

Length = 258

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 79.2 bits (196), Expect = 4e-17
 Identities = 57/209 (27%), Positives = 83/209 (39%), Gaps = 26/209 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VT ASSGIG   AR LA  G  V +  RN          +      A V A+  D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASEL--RAGGAGVLAVVAD 58

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFMLSKDNIELQFATNHIGHFLLTN 146
           L+    + +   +   +   ++IL+NNAG         L+ ++    F    +    +  
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVR 118

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M     +    GRIVN+SS             +     S   R      + L  +
Sbjct: 119 AVLPGM-----KERGWGRIVNISSL-------TVKEPEPNLVLSNVAR------AGLIGL 160

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
           + T  L+R L  DG  +T NSV PG I T
Sbjct: 161 VKT--LSRELAPDG--VTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 79.1 bits (195), Expect = 5e-17
 Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 40/275 (14%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           +TG+S G+G   AR L  +G  VV+  R+     + K A     P A    +  DLSSLA
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAA----CPGAAG-VLIGDLSSLA 66

Query: 94  SVRKFASEFKSSGLPLNILINNAGIMATPFMLSKD-NIELQFATNHIGHFLLTNLLLETM 152
             RK A +  + G   + +I+NAGI++ P   + D  I    A N +  ++LT L+    
Sbjct: 67  ETRKLADQVNAIG-RFDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI---- 121

Query: 153 GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN-DQSGYNRFSAYGQSKLANVLHTSE 211
                   +  R++ +SS  H+         D I+    G N   AY  SKL  +   + 
Sbjct: 122 -------RRPKRLIYLSSGMHRGG---NASLDDIDWFNRGENDSPAYSDSKLHVLTLAAA 171

Query: 212 LARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVAL 271
           +ARR K    D+++N+VHPG + T +              G     ++EQG  T  ++A 
Sbjct: 172 VARRWK----DVSSNAVHPGWVPTKMG-------------GAGAPDDLEQGHLTQVWLAE 214

Query: 272 HPHVKGLT-GSYFADSNVAQASSQAVNTELAQKLW 305
               + LT G YF    + +    + ++ L +KL 
Sbjct: 215 SDDPQALTSGGYFYHRRLQEPHPASEDSRLQEKLV 249

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 27/216 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T ++TGASSGIG  TAR  A  G  +++  R     +E+   +  + P  KV  ++LD+S
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPV-KVLPLQLDVS 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTNL 147
              S+             ++IL+NNAG+   +        ++ E    TN  G   +T L
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L  M   AR     G I+N+ S   ++ Y  G               + Y  +K A   
Sbjct: 121 ILPIM--IARNQ---GHIINLGSIAGRYPYAGG---------------NVYCATKAAVRQ 160

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
            +  L + L   G+ +T  ++ PG + T  F  + F
Sbjct: 161 FSLNLRKDLIGTGIRVT--NIEPGLVETE-FSLVRF 193

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 46/218 (21%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTGA+ GIG  TA+ LA  G  VV+A  +  A       +           +  
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDR---ALGVAC 477

Query: 88  DLSSLASVR----KFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE-------LQFAT 136
           D++  A+V+    + A  F   G  ++I+++NAGI      +S    E         F  
Sbjct: 478 DVTDEAAVQAAFEEAALAF--GG--VDIVVSNAGI-----AISGPIEETSDEDWRRSFDV 528

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N  GHFL+    +  M    +     G IV ++S       P            G N F 
Sbjct: 529 NATGHFLVAREAVRIM----KAQGLGGSIVFIAS--KNAVNP------------GPN-FG 569

Query: 197 AYGQSKLANVLH-TSELARRLKEDGVDITANSVHPGAI 233
           AYG +K A  LH   +LA  L  DG  I  N V+P A+
Sbjct: 570 AYGAAK-AAELHLVRQLALELGPDG--IRVNGVNPDAV 604

Length = 681

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 76.2 bits (188), Expect = 3e-16
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 33/217 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRG-VHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELD 88
             I+TGAS GIG   A  L  RG   VV+ + R+    +E+K+ +    P  +V  ++ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR---PGLRVTTVKAD 57

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM----LSKDNIELQFATNHIGHFLL 144
           LS  A V +     +      ++LINNAG    P      +  D ++  F  N      L
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAG-SLGPVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T+ LL    +  ++   +  +VNVSS                   + +  +  Y  SK A
Sbjct: 117 TSTLL----RAFKKRGLKKTVVNVSS---------------GAAVNPFKGWGLYCSSKAA 157

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                    R L  +  D+   S  PG + T++ R I
Sbjct: 158 ----RDMFFRVLAAEEPDVRVLSYAPGVVDTDMQREI 190

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 76.7 bits (189), Expect = 3e-16
 Identities = 70/215 (32%), Positives = 90/215 (41%), Gaps = 33/215 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           + ++TG SSGIG E A  L  RG  V      +AACR  K   V  + +     + LDL 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRV------LAACR--KPDDVARMNSLGFTGILLDLD 55

Query: 91  SLASVRKFASE-FKSSGLPLNILINNAGI-MATPF-MLSKDNIELQFATNHIGHFLLTNL 147
              SV + A E    +   L  L NNAG  +  P   +S+  +E QF+TN  G   LT L
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           LL  M         EGRIV  SS     S P               R  AY  SK A  L
Sbjct: 116 LLPAM-----LPHGEGRIVMTSSVMGLISTP--------------GR-GAYAASKYA--L 153

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
                A R++     I  + + PG I T    N++
Sbjct: 154 EAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVN 188

Length = 256

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 75.9 bits (187), Expect = 4e-16
 Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 29/211 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AIVTG + G+G   AR+L   G  VV++        E  +A   E+     +   L
Sbjct: 4   KGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDIL----DEEGQAAAAEL-GDAARFFHL 58

Query: 88  DLSSLASVRK-FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLL 144
           D++          +  ++ G  L++L+NNAGI+    + +    E +     N  G FL 
Sbjct: 59  DVTDEDGWTAVVDTAREAFG-RLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLG 117

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  ++  M +        G I+N+SS               I    G    +AY  SK A
Sbjct: 118 TRAVIPPMKEAGG-----GSIINMSS---------------IEGLVGDPALAAYNASKGA 157

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
               T   A      G  I  NSVHPG I T
Sbjct: 158 VRGLTKSAALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 75.7 bits (186), Expect = 6e-16
 Identities = 63/211 (29%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-VMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
            A+VTG S GIG  TA +LA  G  V V   +N+ A +EV   I +     K   ++ D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADI 60

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFM---LSKDNIELQFATNHIGHFLLTN 146
           S    V    +       PL  L+NNAGI+ T      L+ + I    +TN  G+FL   
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             ++ M    +     G IVNVSS   +   P                +  Y  SK A  
Sbjct: 121 EAVKRMAL--KHGGSGGAIVNVSSAASRLGAP--------------GEYVDYAASKGAID 164

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNL 237
             T+ L+  +   G  I  N V PG I T +
Sbjct: 165 TLTTGLSLEVAAQG--IRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 76.0 bits (187), Expect = 7e-16
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 33/217 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELD 88
            A++TGAS+GIG  +A  LA  G +V+      A         V +I +   K +A  +D
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAVDIAEAV-----SETVDKIKSNGGKAKAYHVD 62

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ---FATNHIGHFLLT 145
           +S    V+ FASE K     +++L NNAG+      + +  +++     A +  G FL+T
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMT 122

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            +LL  M +      + G I+N SS    FS   G   D    +SGYN       +K A 
Sbjct: 123 KMLLPLMME------QGGSIINTSS----FS---GQAADL--YRSGYN------AAKGAV 161

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +  T  +A     DG  I AN++ PG I T L   ++
Sbjct: 162 INFTKSIAIEYGRDG--IRANAIAPGTIETPLVDKLT 196

Length = 272

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 75.5 bits (186), Expect = 8e-16
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 28/211 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--E 86
           G  A+VTGASSGIG   A  LA  G +VV+   N  +  +  + +V+EI     +A+  +
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVV---NYRSKEDAAEEVVEEIKAVGGKAIAVQ 59

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLL 144
            D+S    V             L+IL+NNAG+   A+   ++ ++       N  G FL 
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLC 119

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               ++      R+S  +G+I+N+SS   +  +P                   Y  SK  
Sbjct: 120 AREAIKRF----RKSKIKGKIINMSSVHEKIPWP---------------GHVNYAASKGG 160

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
             + T  LA+     G  I  N++ PGAI T
Sbjct: 161 VKMMTKTLAQEYAPKG--IRVNAIAPGAINT 189

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 30/215 (13%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
            D  G    +TG + GIG  TAR LA  G  V +   + A  +E       E+    V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKET----AAELGL--VVG 54

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDN--IELQFATNHIGHF 142
             LD++  AS   F    ++   P+++L+NNAG+M     L + +         N  G  
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVI 114

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L + L    M    R     G +VNV+S   +     G+              + Y  SK
Sbjct: 115 LGSKLAAPRMVPRGR-----GHVVNVASLAGKI-PVPGM--------------ATYCASK 154

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            A V  T      L+  GV ++   V P  + T L
Sbjct: 155 HAVVGFTDAARLELRGTGVHVSV--VLPSFVNTEL 187

Length = 273

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 28/212 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAME 86
           G   ++TG SSGIG   A+ L   G +V++  R+ +   E  + I  E      KV  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATP--FM-LSKDNIELQFATNHIGHFL 143
            DLS    V +  ++    G P ++++N AG ++ P  F  L+ +  E     N+ G   
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAG-ISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           + + +L  M +      + G IV VSS+                   GY   SAY  SK 
Sbjct: 120 VAHAVLPLMKE-----QRPGHIVFVSSQAALVGIY------------GY---SAYCPSKF 159

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           A       L + LK   + ++   V+P    T
Sbjct: 160 ALRGLAESLRQELKPYNIRVSV--VYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 76.8 bits (189), Expect = 2e-15
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 25/209 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +   A VTG + GIG ETAR LA  G HVV+A  N+ A   V   I  +    +  A+++
Sbjct: 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKM 472

Query: 88  DLSSLASVRK-FASEFKSSGLPLNILINNAGI-MATPFMLSKDNI-ELQFATNHIGHFLL 144
           D++   +V+  FA    + G  ++I++NNAGI  ++PF  +     +L       G+FL+
Sbjct: 473 DVTDEQAVKAAFADVALAYG-GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLV 531

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  M    RE    G IV ++S+   ++                   SAY  +K A
Sbjct: 532 AREAFRQM----REQGLGGNIVFIASKNAVYAGKNA---------------SAYSAAKAA 572

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAI 233
                  LA      G+ +  N+V+P A+
Sbjct: 573 EAHLARCLAAEGGTYGIRV--NTVNPDAV 599

Length = 676

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 26/211 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            I+TGAS GIG  TA + A RG  V +  +RN  A   V +AI ++    +  A+  D++
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVA 62

Query: 91  SLASV-RKFASEFKSSGLPLNILINNAGIMATPFMLSK-DNIELQ--FATNHIGHFLLTN 146
             A V R F +  +  G  L+ L+NNAGI+     L + D   L   FATN +G FL   
Sbjct: 63  DEADVLRLFEAVDRELG-RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR 121

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             ++ M  + R   + G IVNVSS   +   P                +  Y  SK A  
Sbjct: 122 EAVKRM--STRHGGRGGAIVNVSSMAARLGSP--------------GEYIDYAASKGAID 165

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNL 237
             T  LA+ +  +G  I  N+V PG I T +
Sbjct: 166 TMTIGLAKEVAAEG--IRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 5e-15
 Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 37/220 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
           S   AIVTGAS GIG   AR LA  G  V +   N A        +V EI  A  +  A+
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAV---NYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FATNHIG 140
           + D++  A+V +     +++   +++L+NNAG+M    + +  + +L+      ATN  G
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM---PLGTIADFDLEDFDRTIATNLRG 117

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            F+        + + AR   + GRI+N+S+       P                   Y  
Sbjct: 118 AFV-------VLREAARHLGQGGRIINLSTSVIALPLPGY---------------GPYAA 155

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           SK A       LA  L+  G  IT N+V PG + T LF N
Sbjct: 156 SKAAVEGLVHVLANELR--GRGITVNAVAPGPVATELFFN 193

Length = 245

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 69/227 (30%), Positives = 92/227 (40%), Gaps = 43/227 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG   +VTGA SGIG ETA   A  G  VV +  + AA     + I      A   A  +
Sbjct: 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRV 371

Query: 88  DLSSLASVRKFASEFKSS-GLPLNILINNAGI-MATPFMLSKDNIELQFATNHIGHFLLT 145
           D+S   ++  FA   ++  G+P +I++NNAGI MA  F        L  +       L  
Sbjct: 372 DVSDADAMEAFAEWVRAEHGVP-DIVVNNAGIGMAGGF--------LDTSAEDWDRVLDV 422

Query: 146 NLL-----LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGY---NRFSA 197
           NL          G+   E    G IVNV+S                   + Y       A
Sbjct: 423 NLWGVIHGCRLFGRQMVERGTGGHIVNVAS------------------AAAYAPSRSLPA 464

Query: 198 YGQSKLANVLHTSELAR-RLKEDGVDITANSVHPGAITTNLFRNISF 243
           Y  SK A VL  SE  R  L   G+ +TA  + PG + TN+     F
Sbjct: 465 YATSKAA-VLMLSECLRAELAAAGIGVTA--ICPGFVDTNIVATTRF 508

Length = 582

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 72.6 bits (179), Expect = 6e-15
 Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 35/212 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDL 89
           A+VTGAS GIG   A  LA  G  V++  R+     E  + +V+E+     K   +  D+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE---EGAEEVVEELKAYGVKALGVVCDV 57

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFMLSKDNIELQF----ATNHIGHFLL 144
           S    V+    E +    P++IL+NNAGI      M  K+     +     TN  G F L
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEE---DWDAVIDTNLTGVFNL 114

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  +L  M K      + GRI+N+SS               +    G    + Y  SK  
Sbjct: 115 TQAVLRIMIK-----QRSGRIINISS---------------VVGLMGNAGQANYAASKAG 154

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTN 236
            +  T  LA+ L      IT N+V PG I T+
Sbjct: 155 VIGFTKSLAKELASRN--ITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 74.6 bits (184), Expect = 8e-15
 Identities = 57/181 (31%), Positives = 74/181 (40%), Gaps = 28/181 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G   ++TGASSGIG  TA  +A  G  V +  RN  A  E+   I          A   D
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI--RAKGGTAHAYTCD 428

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFMLSKD---NIELQFATNHIGHFL 143
           L+  A+V     +  +    ++ L+NNAG  I  +    S D   + E   A N+ G   
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGAVR 487

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           L   LL  M    R     G +VNVSS               I  Q+   RFSAY  SK 
Sbjct: 488 LILGLLPHM--RERRF---GHVVNVSS---------------IGVQTNAPRFSAYVASKA 527

Query: 204 A 204
           A
Sbjct: 528 A 528

Length = 657

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 32/220 (14%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLS 90
           A+VTGA+ GIG   A  LA RG +V++  R       V K I ++     K  A   D S
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAA--DFS 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI---MATPFM-LSKDNIELQFATNHIGHFLLTN 146
           +   + +   E +  GL + IL+NN GI   +   F+   +D ++     N +    +T 
Sbjct: 62  AGDDIYE-RIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L+L  M        K+G IVN+SS       P                 + Y  SK    
Sbjct: 121 LILPGM-----VKRKKGAIVNISSFAGLIPTP---------------LLATYSASKAFLD 160

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNL--FRNISFF 244
             +  L    K  G+D+   S+ P  + T +   R  S F
Sbjct: 161 FFSRALYEEYKSQGIDV--QSLLPYLVATKMSKIRKSSLF 198

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 1e-14
 Identities = 57/217 (26%), Positives = 83/217 (38%), Gaps = 28/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            GL  +VTG +SGIG   A   A  G  V +   + AA      A    +P AKV A   
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL----AATAARLPGAKVTATVA 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFLL 144
           D++  A V +           L++L+NNAGI         ++ +  E   A N  G F  
Sbjct: 66  DVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               +  +    + S   G I+ +SS               +  + GY   + Y  SK A
Sbjct: 126 ARAAVPLL----KASGHGGVIIALSS---------------VAGRLGYPGRTPYAASKWA 166

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V     LA  L   G  I  N++ PG +     R +
Sbjct: 167 VVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRRV 201

Length = 264

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 15/147 (10%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G T ++TG +SGIG   A+     G  V++  RN     E K     E P   +     
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK----AENPE--IHTEVC 57

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFL 143
           D++   S R+     K     LN+LINNAGI      T      D+ E + ATN +    
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIR 117

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSS 170
           LT LLL  + +       E  I+NVSS
Sbjct: 118 LTALLLPHLLR-----QPEATIINVSS 139

Length = 245

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGA+ GIG   AR  A  G  V +A  + A       AI +++  A+V A+  D
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPAD 66

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTN 146
           ++  ASV    +  + +  PL++L+NNAGI   A P  ++ ++    FA +  G +    
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR 126

Query: 147 LLLETMGKTARESSKEGRIVNVSSRR------HQFSYP 178
            +L  M +  R     G IVN++S          F YP
Sbjct: 127 AVLPGMVERGR-----GSIVNIASTHAFKIIPGCFPYP 159

Length = 260

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 32/215 (14%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI--PNAKVQAMELDL 89
            ++TGASSGIG   AR  A  G +V +A R      +    +  E+  PN  V+   LD+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGI-MATPF--MLSKDNIELQFATNHIGHFLLTN 146
           +     +   +E ++    L+++I NAG+   T    +  K   E    TN +G   +  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRET-IDTNLLGAAAILE 115

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L         +   G +V +SS       P                 +AY  SK A  
Sbjct: 116 AALPQF-----RAKGRGHLVLISSVAALRGLP---------------GAAAYSASKAALS 155

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                L   +K+ G+ +T   ++PG I T L  N+
Sbjct: 156 SLAESLRYDVKKRGIRVT--VINPGFIDTPLTANM 188

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 59/216 (27%), Positives = 87/216 (40%), Gaps = 42/216 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRN-----MAACREVKKAIVKEIPNAKVQAM 85
            AIVT + SGIG   A +LA +G  + +   +          EV+          + +  
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH------GVRAEIR 57

Query: 86  ELDLSSL----ASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHI 139
           +LDLS L     ++ K           +++L+NNAG M   PF+ +  D     F  +  
Sbjct: 58  QLDLSDLPEGAQALDKLIQRLGR----IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVD 113

Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
           G FL + +    M K  +     GRI+N++S       P                 SAY 
Sbjct: 114 GAFLCSQIAARHMVKQGQ----GGRIINITSVHEHTPLPGA---------------SAYT 154

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            +K A    T  +A  L E G  I  N+V PGAI T
Sbjct: 155 AAKHALGGLTKAMALELVEHG--ILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 42/223 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGA+SGIG E A  LA  G  VV+A  N  A     +A+ K     K   + +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAM 60

Query: 88  DLSSL----ASVRKFASEFKSSGLPLNILINNAGIM------ATPFMLSKDNIELQFATN 137
           D++      A +      F      ++IL+NNAGI         P     +  +   A  
Sbjct: 61  DVTDEEAINAGIDYAVETFGG----VDILVNNAGIQHVAPIEDFPT----EKWKKMIAIM 112

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
             G FL T   L  M          GRI+N++S               ++   G    +A
Sbjct: 113 LDGAFLTTKAALPIMKA-----QGGGRIINMAS---------------VHGLVGSAGKAA 152

Query: 198 YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           Y  +K   +  T  +A      G  +T N++ PG + T L R 
Sbjct: 153 YVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVRK 193

Length = 258

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 3e-14
 Identities = 54/211 (25%), Positives = 81/211 (38%), Gaps = 26/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGAS GIG   A  LA  G ++V+  RN     E ++ I KE    +  A   
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAFTC 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLT 145
           D+S   +++      +     ++IL+NNAGI+         +         N  G F ++
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVS 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +   M K        G+I+N+ S               +  + G     AY  SK   
Sbjct: 122 QAVARHMIKQ-----GHGKIINICS---------------LLSELGGPPVPAYAASKGGV 161

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTN 236
              T  LA      G  I  N++ PG   T 
Sbjct: 162 AGLTKALATEWARHG--IQVNAIAPGYFATE 190

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 70.1 bits (172), Expect = 5e-14
 Identities = 55/208 (26%), Positives = 79/208 (37%), Gaps = 29/208 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL--DL 89
           A+VTG S GIG   A  LA RG  VV+  R      +    +  EI     +A+ +  D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSK---DAAAEVAAEIEELGGKAVVVRADV 57

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNL 147
           S    V +  +  K     L++L++NA   A  P   L+  + + +  TN          
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
             + M          GRIV +SS     + P                + A G +K A   
Sbjct: 118 AAKLM-----RERGGGRIVAISSLGSIRALPN---------------YLAVGTAKAALEA 157

Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
               LA  L   G  I  N+V PG I T
Sbjct: 158 LVRYLAVELGPRG--IRVNAVSPGVIDT 183

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 63/214 (29%), Positives = 83/214 (38%), Gaps = 34/214 (15%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D SG + +VTGASSGIG   A  LA RG  VV A RN AA   +      E        +
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE-------PL 58

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFL 143
            LD+   A++R   +         + L+N AGI  + +   ++ +  +   A N  G  L
Sbjct: 59  RLDVGDDAAIRAALAAAG----AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +   +   M    R     G IVNVSS                    G     AY  SK 
Sbjct: 115 VARHVARAMIAAGR----GGSIVNVSS---------------QAALVGLPDHLAYCASKA 155

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           A    T  L   L   G  I  NSV+P    T +
Sbjct: 156 ALDAITRVLCVELGPHG--IRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 59/222 (26%), Positives = 83/222 (37%), Gaps = 42/222 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA+VTGA+SGIG   AR LA  G +VV+            K          V  +  D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVA--GDAGGSVIYLPAD 58

Query: 89  LSSLASV----RKFASEFKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNH 138
           ++    +       A+EF      L+IL+NNAGI         P     ++ +   A   
Sbjct: 59  VTKEDEIADMIAAAAAEFGG----LDILVNNAGIQHVAPIEEFPP----EDWDRIIAVML 110

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              F      L  M K        GRI+N++S                +        SAY
Sbjct: 111 TSAFHTIRAALPHMKKQGW-----GRIINIAS---------------AHGLVASPFKSAY 150

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             +K   +  T  LA  + E G  IT N++ PG + T L   
Sbjct: 151 VAAKHGLIGLTKVLALEVAEHG--ITVNAICPGYVRTPLVEK 190

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 33/217 (15%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           +D +G  A+VTGA  GIG  T + LA  G  VV   R  A       ++V+E P   ++ 
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADL----DSLVRECPG--IEP 56

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHF 142
           + +DLS   +  +       S  P+++L+NNA + +  PF+ ++K+  +  F  N     
Sbjct: 57  VCVDLSDWDATEEAL----GSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            ++ ++   M          G IVNVSS+  Q +                   + Y  +K
Sbjct: 113 HVSQIVARGM----IARGVPGSIVNVSSQASQRALTN---------------HTVYCSTK 153

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            A  + T  +A  L      I  NSV+P  + T++ R
Sbjct: 154 AALDMLTKVMALELGPH--KIRVNSVNPTVVMTDMGR 188

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 14/150 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TGA+SGIG   A      G  VV+A    A  R     I          A+ L
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSL 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++   S+ +  +        ++IL NNA +  MA    +S+D+ +  FA N  G F L 
Sbjct: 60  DVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSS---RR 172
             +   M     E  + G+I+N++S   RR
Sbjct: 120 QAVARHM----VEQGRGGKIINMASQAGRR 145

Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 37/217 (17%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA+VTG + GIG      LA  G  V    RN     E      ++    KV+    D
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGSVCD 63

Query: 89  LSSLASVRKFA-SEFKSSGLPLNILINNAGIM----ATPFMLSKDNIELQFATNHIGHFL 143
           +SS +  ++   +     G  LNIL+NNAG      A  +  ++++  L  +TN    + 
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDY--TEEDYSLIMSTNFEAAYH 121

Query: 144 LTNL---LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           L+ L   LL+         S  G IV +SS     + P G               + YG 
Sbjct: 122 LSRLAHPLLKA--------SGNGNIVFISSVAGVIAVPSG---------------APYGA 158

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           +K A    T  LA    +D   I  N+V P  I T L
Sbjct: 159 TKGALNQLTRSLACEWAKDN--IRVNAVAPWVIATPL 193

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 57/238 (23%), Positives = 91/238 (38%), Gaps = 37/238 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACRE-VKKAIVKEIPNAKVQAMELD 88
           T +VTGA+ GIG      L   G   V  AVR+  +    V K         KV  + LD
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYG------DKVVPLRLD 58

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE---LQFATNHIGHFLLT 145
           ++   S++  A++ K     ++++INNAG++    +L +  +E    +   N  G   L 
Sbjct: 59  VTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLA 114

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 +       +  G IVN++S     ++P                   Y  SK A 
Sbjct: 115 QAFAPVLKA-----NGGGAIVNLNSVASLKNFPA---------------MGTYSASKSAA 154

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA 263
              T  L   L   G  +   SVHPG I T +             + + V+K ++ G 
Sbjct: 155 YSLTQGLRAELAAQGTLVL--SVHPGPIDTRMAAGAGGPKESPETVAEAVLKALKAGE 210

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 13/145 (8%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA SG G   AR  A  G  VV+A  N      V      +I  A + A++ D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV----AADIGEAAI-AIQAD 59

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHIGHFLLT 145
           ++  A V        S    L+IL+NNAGI      +    ++  +  FA N    +L  
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSS 170
             L+  M     E    G I+N++S
Sbjct: 120 QALVPHM-----EEQGGGVIINIAS 139

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 67.6 bits (165), Expect = 4e-13
 Identities = 62/221 (28%), Positives = 89/221 (40%), Gaps = 36/221 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGASSGIG  TAR LA  G  V +A R +     +   +  E    K   +ELD
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGKALVLELD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIG-----H 141
           ++    V         +   L+IL+NNAGIM    +   D  +      TN +G     H
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
             L + LL   G     SS  GR+   +S  +  +            + G N FS     
Sbjct: 121 AALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNAT------------KFGVNAFS----- 163

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
                     L + + E GV +    + PG + T L  +I+
Sbjct: 164 --------EGLRQEVTERGVRVVV--IEPGTVDTELRDHIT 194

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 6e-13
 Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 32/212 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A++TGASSGIG  TA   A  G  + +  R+  A   +   +       K  A  +DLS
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNLL 148
           +  ++    +E        ++LINNAG+  T  +L     + Q     N    F   + +
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF---SAYGQSKLAN 205
           L  M      +   G I+NVSS                   +  N F    AY  SK A 
Sbjct: 126 LPGM-----RARGGGLIINVSS------------------IAARNAFPQWGAYCVSKAAL 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
              T  LA   +  G  I   ++  GA+ T L
Sbjct: 163 AAFTKCLAEEERSHG--IRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 67.6 bits (166), Expect = 6e-13
 Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 25/146 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGASSGIG  TA  LA  G  V    RN A          +  P   V+ +ELD++
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPA----------RAAPIPGVELLELDVT 55

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFML------SKDNIELQFATNHIGHFLL 144
             ASV+    E  +    +++L+NNAG+     +       S    +  F TN  G   +
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGVG----LAGAAEESSIAQAQALFDTNVFGILRM 111

Query: 145 TNLLLETMGKTARESSKEGRIVNVSS 170
           T  +L  M      +   GRI+N+SS
Sbjct: 112 TRAVLPHM-----RAQGSGRIINISS 132

Length = 270

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 7e-13
 Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 34/215 (15%)

Query: 27  GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
             G  A++TG S GIG   A  L   G  V +  R+     E    +  +     V  + 
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLA 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLL 144
            D+   A V++      ++   L++LI NAG+   A    L+ +   L   TN  G F  
Sbjct: 61  ADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF---SAYGQS 201
               +  + +        G I+N+SS                   +G N F   +AY  S
Sbjct: 121 IKAAVPALKRG------GGYIINISSL------------------AGTNFFAGGAAYNAS 156

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           K   V  +      L++ G+ ++  ++ PG++ T+
Sbjct: 157 KFGLVGFSEAAMLDLRQYGIKVS--TIMPGSVATH 189

Length = 237

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 66.7 bits (163), Expect = 9e-13
 Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 41/215 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDL 89
            A+VTGA  GIG+  AR L   G  V+          ++  +         +V+  ELD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDV 61

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA---------TNHIG 140
           +      +  +E +    P++IL+NNAGI       ++D++  + +         TN   
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI-------TRDSVFKRMSHQEWNDVINTNLNS 114

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            F +T  L   M     E    GRI+N+SS               +N   G    + Y  
Sbjct: 115 VFNVTQPLFAAM----CEQG-YGRIINISS---------------VNGLKGQFGQTNYSA 154

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           +K   +  T  LA      G  IT N + PG I T
Sbjct: 155 AKAGMIGFTKALASEGARYG--ITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 34/211 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG +SGIG   A+ LA  G  VV+A  +       +K         +   ++ D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEI---AEKVAEAAQGGPRALGVQCD 57

Query: 89  LSSLASVR----KFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHF 142
           ++S A V+    +   EF      L+I+++NAGI  ++P    S ++       N  GHF
Sbjct: 58  VTSEAQVQSAFEQAVLEFGG----LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHF 113

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L++      M    +     G IV  +S+      P            G N  +AY  +K
Sbjct: 114 LVSREAFRIM----KSQGIGGNIVFNASK--NAVAP------------GPN-AAAYSAAK 154

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAI 233
            A       LA    EDG  I  N+V+P A+
Sbjct: 155 AAEAHLARCLALEGGEDG--IRVNTVNPDAV 183

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 60/219 (27%), Positives = 87/219 (39%), Gaps = 32/219 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           GL A+VTG +SG+G  T   L  +G  VV+            + + K   N +     +D
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLP----NSPGETVAKLGDNCRFV--PVD 55

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI------ELQFA--TNHIG 140
           ++S   V+   +  K+    L+I++N AGI       +K           Q     N IG
Sbjct: 56  VTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115

Query: 141 HFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
            F +  L    MGK   +   E G I+N +S     +  EG        Q G    +AY 
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTAS----VAAFEG--------QIGQ---AAYS 160

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF 238
            SK   V  T  +AR L   G  I   ++ PG   T L 
Sbjct: 161 ASKGGIVGMTLPIARDLAPQG--IRVVTIAPGLFDTPLL 197

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 63/213 (29%), Positives = 85/213 (39%), Gaps = 25/213 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDL 89
            ++TG S G+G   A  LA  G  V++   +    R    A+   I  A  K   +  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNL 147
              A+ R            L+IL+NNAGI     F  LS +  +     N  G F +T  
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQA 128

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            L  M +  R     GRIVN++S         G+R        G      Y  SK   + 
Sbjct: 129 ALPPMIRARR----GGRIVNIAS-------VAGVR--------GNRGQVNYAASKAGLIG 169

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            T  LA  L   G  IT N+V PGAI T +  N
Sbjct: 170 LTKTLANELAPRG--ITVNAVAPGAINTPMADN 200

Length = 249

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 11/152 (7%)

Query: 23  QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV 82
           Q +D +G   ++TGASSGIG   A   A RG  VV   R       V   I +   +A  
Sbjct: 34  QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAM- 92

Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNAG-IMATPFMLSKD---NIELQFATNH 138
            A+  DLS L +V    ++ +     ++ILINNAG  +  P   S D   ++E     N+
Sbjct: 93  -AVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNY 151

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
                L   L   M    R    +G I+NV++
Sbjct: 152 YAPLRLIRGLAPGM--LER---GDGHIINVAT 178

Length = 293

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 23/146 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGASSGIG  TAR LA +G  V        A R V K  ++++ +  V  + LD++
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTV------YGAARRVDK--MEDLASLGVHPLSLDVT 56

Query: 91  SLASVRKFASEFKSSGLPLNILINNAG------IMATPFMLSKDNIELQFATNHIGHFLL 144
             AS++       +    +++L+NNAG      I   P     D    QF  N  G   L
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPI----DEARRQFEVNLFGAARL 112

Query: 145 TNLLLETMGKTARESSKEGRIVNVSS 170
           T L+L  M        + GRI+N+SS
Sbjct: 113 TQLVLPHMRA-----QRSGRIINISS 133

Length = 273

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 63/210 (30%), Positives = 90/210 (42%), Gaps = 32/210 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            AIVTGA+ GIG   A  LA  G  VV+A  N      V K IV +   A   A+++D+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVS 65

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSK---DNIELQFATNHIGHFLLT 145
              S +  A    S+   ++ L+NNA I       +L     D  +   + N  G  + T
Sbjct: 66  DPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCT 125

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             + + M K        G IVN SS    + Y            S +     YG +K+  
Sbjct: 126 RAVYKHMAK-----RGGGAIVNQSSTA-AWLY------------SNF-----YGLAKVGL 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
              T +LAR L   G++I  N++ PG I T
Sbjct: 163 NGLTQQLAREL--GGMNIRVNAIAPGPIDT 190

Length = 250

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 24/212 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA++TGAS GIG   AR     G  V++  R+  A  + +  + +E P  +V  +  
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAA 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLT 145
           D+S     R      +     L+IL+NNAG       +  ++D     F TN    F L+
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELS 127

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 + +          IVN+ S         G+     + +SG    + YG +K A 
Sbjct: 128 RYAHPLLKQ-----HASSAIVNIGS-------VSGL----THVRSG----APYGMTKAAL 167

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           +  T  LA    EDG  I  N+V P  I T L
Sbjct: 168 LQMTRNLAVEWAEDG--IRVNAVAPWYIRTPL 197

Length = 257

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 14/154 (9%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK 81
           T   D +G  A+VTGAS GIG   A++LA +G HV+++ R +  C+ V  AIV      K
Sbjct: 1   TNLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGK 58

Query: 82  VQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPF---MLSKDNIELQ--FAT 136
            +A+   +  +  +    +  +     L+IL+NNA   A P+   +L  D    Q     
Sbjct: 59  AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAA--ANPYFGHILDTDLGAFQKTVDV 116

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
           N  G+F ++       GK  +E    G IVNV+S
Sbjct: 117 NIRGYFFMS----VEAGKLMKEQGG-GSIVNVAS 145

Length = 252

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 64.7 bits (158), Expect = 4e-12
 Identities = 58/208 (27%), Positives = 84/208 (40%), Gaps = 24/208 (11%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TGASSGIG  TA   A RG  VV+A R+  A  E+    V+E+   +  A+  D++  
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHEL-AREVREL-GGEAIAVVADVADA 61

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNLLLE 150
           A V + A         ++  +NNAG+            E +  F  N++GH   T   L 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 210
            + +        G ++NV S      Y                  +AY  SK A    T 
Sbjct: 122 HLRRRG-----GGALINVGS---LLGY-RSAPLQ-----------AAYSASKHAVRGFTE 161

Query: 211 ELARRLKEDGVDITANSVHPGAITTNLF 238
            L   L  DG  I+   V P A+ T  F
Sbjct: 162 SLRAELAHDGAPISVTLVQPTAMNTPFF 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 4e-12
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 26/216 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA++TGA  GIG   ARV A  G ++++   +     ++   +       +  A+  D
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCG--RGHRCTAVVAD 62

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTN 146
           +   ASV       K     ++IL+NNAG+     F+ +S ++ +     N  G + +T 
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M        K+GRIV +SS          +  D + D       +AY  +K A V
Sbjct: 123 AVLPEMIA-----RKDGRIVMMSS----------VTGDMVADPGE----TAYALTKAAIV 163

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             T  LA    + G  I  N++ PG + T +  +I+
Sbjct: 164 GLTKSLAVEYAQSG--IRVNAICPGYVRTPMAESIA 197

Length = 263

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 7e-12
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 28/215 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--ELD 88
            AI+TGA+ GIG   A  LA  G ++V+A  N+    E  K+ ++EI  A   A+    D
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNL---EEAAKSTIQEISEAGYNAVAVGAD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTN 146
           ++    V     +        ++++NNAGI   TP + +++++++  +A N  G      
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
                  K        G+I+N SS      +P                  AY  SK A  
Sbjct: 121 AAARQFKKLGH----GGKIINASSIAGVQGFPN---------------LGAYSASKFAVR 161

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             T   A+ L   G  IT N+  PG + T ++  I
Sbjct: 162 GLTQTAAQELAPKG--ITVNAYAPGIVKTEMWDYI 194

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 64.1 bits (156), Expect = 8e-12
 Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 36/217 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-VMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
             ++TGAS GIG  TA + A RG  V +   R+ AA  E   A+       +   +  D+
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDV 61

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFM----LSKDNIELQFATNHIGHFLLT 145
           ++ A V       +S+   L+ L+NNAGI+A P M    +    +   F TN +G +L  
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 146 NLLLETMGKTARESSKE-----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
                   + AR  S +     G IVNVSS   +   P              N +  Y  
Sbjct: 121 R-------EAARRLSTDRGGRGGAIVNVSSIASRLGSP--------------NEYVDYAG 159

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           SK A    T  LA+ L   GV +  N+V PG I T +
Sbjct: 160 SKGAVDTLTLGLAKELGPHGVRV--NAVRPGLIETEI 194

Length = 248

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 63.9 bits (155), Expect = 8e-12
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 29/214 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAM 85
           +G  AIVTG + GIG      LA  G  VV+   N  + +E  + +V E+      V A+
Sbjct: 5   NGKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAV 61

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFL 143
           + D+S +    +   E  +    ++IL+NNAGI    T   L++++ E     N    F 
Sbjct: 62  QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
            T+ +L  + +     ++EGRI+++SS               I  Q+G    + Y  +K 
Sbjct: 122 TTSAVLPYITE-----AEEGRIISISS---------------IIGQAGGFGQTNYSAAKA 161

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +  T  LA  L +  V  T N++ PG I T +
Sbjct: 162 GMLGFTKSLALELAKTNV--TVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 66/216 (30%), Positives = 89/216 (41%), Gaps = 27/216 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  AIVTGA SGIG  TA++ A  G  VV+A R+  A   V  AI       +  A + 
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQG 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFMLSKDNIELQFATNHIGHFLLT 145
           D+ S  +V        +    L++L+NNAG     T     + + +     N  G FL  
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M +        G IVN +S+        G R  R          +AY  SK A 
Sbjct: 121 KYAIPIMQR-----QGGGSIVNTASQ----LALAGGR-GR----------AAYVASKGAI 160

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T  +A     DG  I  N+V PG I T  FR I
Sbjct: 161 ASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRRI 194

Length = 252

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 66/215 (30%), Positives = 91/215 (42%), Gaps = 32/215 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA +GIG   A  LA  G  VV+A  +        +A+V +I    + A+ +D
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADID----GGAAQAVVAQIAGGAL-ALRVD 57

Query: 89  LSSLASVRK-FASEFKSSGLPLNILINNAGIMATPFMLSKDNIEL---QFATNHIGHFLL 144
           ++    V   F    +  G  L++L+NNAG M     +   ++ +     A N  G FL 
Sbjct: 58  VTDEQQVAALFERAVEEFG-GLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  M      +   G IVN+SS               I  QSG   + AYG SK A
Sbjct: 117 CRHAAPRM-----IARGGGSIVNLSS---------------IAGQSGDPGYGAYGASKAA 156

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
               T  LA  L+  G  I  N++ PG I T L  
Sbjct: 157 IRNLTRTLAAELRHAG--IRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 63/222 (28%), Positives = 91/222 (40%), Gaps = 39/222 (17%)

Query: 21  VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA 80
           V +  D SG TA+VTG S G+G + A  L   G  VV++ R      E        +   
Sbjct: 4   VLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAA----AHLEAL 59

Query: 81  KVQAMEL--DLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--------PFMLSKDNI 130
            + A+ +  D++  A + + A E       ++IL+NNAG  AT        P       +
Sbjct: 60  GIDALWIAADVADEADIERLAEETLERFGHVDILVNNAG--ATWGAPAEDHPVEAWDKVM 117

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH-QFSYPEGIRFDRINDQ 189
            L    N  G FLL+    + + K +      GRI+NV+S      + PE    D I   
Sbjct: 118 NL----NVRGLFLLS----QAVAKRSMIPRGYGRIINVASVAGLGGNPPE--VMDTI--- 164

Query: 190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG 231
                  AY  SK A +  T  LA      G  I  N++ PG
Sbjct: 165 -------AYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPG 197

Length = 259

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 56/213 (26%), Positives = 82/213 (38%), Gaps = 39/213 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           G   +VTGA+ GIG      L  RG   V  A R+  +        V ++   +V  ++L
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES--------VTDL-GPRVVPLQL 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATP-FMLSK--DNIELQFATNHIGHFLL 144
           D++  ASV   A         + IL+NNAGI  T   +L    D +  +  TN+ G   +
Sbjct: 57  DVTDPASVAAAAEAAS----DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  +      ++  G IVNV S     ++P                   Y  SK A
Sbjct: 113 ARAFAPVL-----AANGGGAIVNVLSVLSWVNFPN---------------LGTYSASKAA 152

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
               T  L   L   G  +    VHPG I T++
Sbjct: 153 AWSLTQALRAELAPQGTRVL--GVHPGPIDTDM 183

Length = 238

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 32/211 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGA+SGIG   AR L   G+ V +  R         K + +     +      D+ 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA--GVEADGRTCDVR 62

Query: 91  SLASVRKFASEFKSSGLPLNILINNAG------IMATPFMLSKDNIELQFATNHIGHFLL 144
           S+  +    +   +   P+++L+NNAG             L  D +E    TN  G F +
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVE----TNLTGVFRV 118

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  +L+  G   R +   GRI+N++S                  + G    + Y  SK  
Sbjct: 119 TKEVLKAGGMLERGT---GRIINIAS---------------TGGKQGVVHAAPYSASKHG 160

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
            V  T  L   L   G  IT N+V PG + T
Sbjct: 161 VVGFTKALGLELARTG--ITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 58/220 (26%), Positives = 80/220 (36%), Gaps = 34/220 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR--EVKKAIV------KEIPN 79
           SG  A VTGAS GIG   A  LA  G  VV+A +  +       K          +EI  
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 80  AKVQAM--ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATN 137
           A  QA+   +D+     VR            L+IL+NNAG +    +             
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQR 121

Query: 138 HI--GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
               G +LL+   L  M K       +G I+N+S        P  +R  R +        
Sbjct: 122 VNLRGTYLLSQAALPHMVKA-----GQGHILNISP-------PLSLRPARGD-------- 161

Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            AY   K      T  LA  L+  G+ +  NS+ P     
Sbjct: 162 VAYAAGKAGMSRLTLGLAAELRRHGIAV--NSLWPSTAIE 199

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 26/214 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A++TGA  GIG   A  LA  GV+V +  R     + V + +       KV     D
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATAD 64

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTN 146
           +S    V     + K+    ++ILINNAGI     F+ L     E     N +G +  T 
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATR 124

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L +M        + G I+N+SS                  Q G    SAY  SK   +
Sbjct: 125 AVLPSM-----IERQSGDIINISS---------------TAGQKGAAVTSAYSASKFGVL 164

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             T  L + +++  + +TA  + P  + T++  +
Sbjct: 165 GLTESLMQEVRKHNIRVTA--LTPSTVATDMAVD 196

Length = 239

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 60/208 (28%), Positives = 81/208 (38%), Gaps = 29/208 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           AIVTG ++GIG   A  LA  G  VV+A         V  AI +     +   +E +++S
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--GGQAIGLECNVTS 59

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT----NHIGHFLLTNL 147
              +        S    + IL+NNAG    P        E  F      N    F L+ L
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQL 118

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
               M K     +  G I+N+SS                N      R +AYG SK A   
Sbjct: 119 CAPHMQK-----AGGGAILNISS------------MSSENKNV---RIAAYGSSKAAVNH 158

Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
            T  LA  L   G+ +  N+V PGA+ T
Sbjct: 159 MTRNLAFDLGPKGIRV--NAVAPGAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 25/212 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTG   GIGT   + LA  G  V           E      +       + +E D+SS
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAE-AWLQEQGALGFDFRVVEGDVSS 61

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
             S +   ++ ++   P+++L+NNAGI   AT   ++ +       TN    F +T  ++
Sbjct: 62  FESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
           + M +        GRI+N+SS               +N Q G    + Y  +K   +  T
Sbjct: 122 DGMRE-----RGWGRIINISS---------------VNGQKGQFGQTNYSAAKAGMIGFT 161

Query: 210 SELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             LA+     GV  T N++ PG I T++   +
Sbjct: 162 KALAQEGATKGV--TVNTISPGYIATDMVMAM 191

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 62/221 (28%), Positives = 87/221 (39%), Gaps = 35/221 (15%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
               G  AIVTG S GIG   AR LA  G  V +   +     E  + + K+    K +A
Sbjct: 4   FSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKY-GVKTKA 62

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHF 142
            + D+SS  SV K   + +     ++ILI NAGI      L  + +        N  G F
Sbjct: 63  YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGY--NR---FSA 197
                  +   K  ++  K G ++  +S                   SG   NR    +A
Sbjct: 123 NCA----QAAAKIFKKQGK-GSLIITAS------------------MSGTIVNRPQPQAA 159

Query: 198 YGQSKLANVLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
           Y  SK A V+H    LA    +    I  NS+ PG I T+L
Sbjct: 160 YNASK-AAVIHLAKSLAVEWAKYF--IRVNSISPGYIDTDL 197

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 43/224 (19%)

Query: 29  GLTAIVTGAS--SGIGTETARVLALRGVHVVMA-----VRNMAACREVKKAIV--KEI-- 77
              A+VTGAS  +GIG    R LA +G+ +         + M      K+ ++  +EI  
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 78  PNAKVQAMELDLSSLAS----VRKFASEFKSSGLPLNILINNA--GIMATPFMLSKDNIE 131
              + + ME+DLS   +        +          +ILINNA          L+ + ++
Sbjct: 65  YGVRCEHMEIDLSQPYAPNRVFYAVSERLGD----PSILINNAAYSTHTRLEELTAEQLD 120

Query: 132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             +A N     LL++   +     A      GRI+N++S +     P+ +          
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKA-----GGRIINLTSGQSLGPMPDEL---------- 165

Query: 192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                AY  +K A    T  LA  L E G  IT N+V+PG   T
Sbjct: 166 -----AYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDT 202

Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 32/216 (14%)

Query: 27  GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
                 +VTGA+ GIG    +  A  G  VV+A RN+   RE   ++          A+ 
Sbjct: 3   AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALA 57

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM-----LSKDNIELQFATNHIGH 141
           +D+S  A +R+   +       +++L+NNAG+   P M      + +      A N  G 
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTD-PTMTATLDTTLEEFARLQAINLTGA 116

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           +L+    L  M +    ++    IVNV+S     + P               + +AY  S
Sbjct: 117 YLVAREALRLMIEQGHGAA----IVNVASGAGLVALP---------------KRTAYSAS 157

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           K A +  T  LA      G+ + A  V PG + T +
Sbjct: 158 KAAVISLTRSLACEWAAKGIRVNA--VLPGYVRTQM 191

Length = 520

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A+VTG +SGIG   A + A +G  V +  R+      V +   + +     + +  
Sbjct: 14  SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED----VAEVAAQLLGGN-AKGLVC 68

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D+S   SV    +   S+   ++IL+N+AG+  +A    +S+++ +     N  G FL+ 
Sbjct: 69  DVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMA 128

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS---GYNRFSAYGQSK 202
             +   M          G+IVN++S                  Q+      R  AY  SK
Sbjct: 129 QAVGRHMIAAGG-----GKIVNLAS------------------QAGVVALERHVAYCASK 165

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
              V  T  LA  L+     IT N++ P  + T L
Sbjct: 166 AGVVGMTKVLA--LEWGPYGITVNAISPTVVLTEL 198

Length = 255

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 29/93 (31%), Positives = 47/93 (50%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           I   G  A+VTG SSGIG  T  +L   G  V +  R+       +  + ++ P A++ A
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAG 117
              D+   A V  FA+  ++    +++L+NNAG
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 4e-11
 Identities = 60/217 (27%), Positives = 90/217 (41%), Gaps = 34/217 (15%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNA-KVQ 83
           D  G   ++TG S+G+G   A         VV+  R +     +V + I K    A  V+
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 84  A---MELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATP-FMLSKDNIELQFATNH 138
               +E D+ +L  ++    EF +    L+++INNAGI  A P   +S ++      TN 
Sbjct: 64  GDVTVESDVVNL--IQTAVKEFGT----LDVMINNAGIENAVPSHEMSLEDWNKVINTNL 117

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
            G FL +   ++       E   +G I+N+SS   Q  +P                F  Y
Sbjct: 118 TGAFLGSREAIKYF----VEHDIKGNIINMSSVHEQIPWP---------------LFVHY 158

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
             SK    L T  LA      G  I  N++ PGAI T
Sbjct: 159 AASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINT 193

Length = 261

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 52/209 (24%), Positives = 74/209 (35%), Gaps = 28/209 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G    +TG   G+G  TA  LA RG  V +  R  A         +  +P   ++   +D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP----LSQTLPGVPADALRIGGID 62

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA--TPFMLSKDNIELQFATNHIGHFLLTN 146
           L    + R+   E       L+ L+N AG     T      D  +  +  N     + T 
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVN-----VKTT 117

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L        A  +S  GRIVN+ +     + P                  AY  +K    
Sbjct: 118 LNASKAALPALTASGGGRIVNIGAGAALKAGPG---------------MGAYAAAKAGVA 162

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
             T  LA  L + G  IT N+V P  I T
Sbjct: 163 RLTEALAAELLDRG--ITVNAVLPSIIDT 189

Length = 239

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 60/211 (28%), Positives = 83/211 (39%), Gaps = 35/211 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            IVTGA+ GIG   AR L   G  V      +A                 ++   LD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV------IALDLPFVLL---LEYGDPLRLTPLDVAD 51

Query: 92  LASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
            A+VR+  S   +   P++ L+N AG+        LS ++ E  FA N  G F L   + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 150 ETMGKTARESSKEGRIVNVSSR-RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
             M    R +   G IV V+S   H           RI+        +AYG SK A    
Sbjct: 112 PHM--KDRRT---GAIVTVASNAAHV---------PRIS-------MAAYGASKAALASL 150

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFR 239
           +  L   L   GV    N V PG+  T + R
Sbjct: 151 SKCLGLELAPYGV--RCNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 6e-11
 Identities = 57/217 (26%), Positives = 79/217 (36%), Gaps = 51/217 (23%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+V G    +G      LA  G  V +A  N      V + I  E           D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTN 146
           S  SV   +         +++L+ NAGI      T F L   +  LQ   N +G+FL   
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQ--VNLVGYFL--- 118

Query: 147 LLLETMGKTARESSK-------EGRIVNVSSRRHQFSYPEGIRFDRINDQSG-----YNR 194
                    ARE S+       +GRI+                  +IN +SG     +N 
Sbjct: 119 --------CAREFSRLMIRDGIQGRII------------------QINSKSGKVGSKHN- 151

Query: 195 FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG 231
            S Y  +K   V  T  LA  L E G  IT +S+  G
Sbjct: 152 -SGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLG 185

Length = 259

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 61.4 bits (149), Expect = 7e-11
 Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 19/210 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGAS GIG   AR L   G+ VV   R +     +     +      +   + 
Sbjct: 5   RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAE-CQSAGYPTLFPYQC 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           DLS+   +    S  ++    +++ INNAG+     +LS      +  F  N +   + T
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICT 123

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
               ++M      +  +G I+N++S       P              + F  Y  +K A 
Sbjct: 124 REAYQSM---KERNVDDGHIININSMSGH-RVPPV------------SVFHFYAATKHAV 167

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
              T  L + L+E    I A S+ PG + T
Sbjct: 168 TALTEGLRQELREAKTHIRATSISPGLVET 197

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 8e-11
 Identities = 60/214 (28%), Positives = 83/214 (38%), Gaps = 36/214 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           + ++TG SSGIG   AR L   G  V       A CR  K+  V  +    ++A +LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVF------ATCR--KEEDVAALEAEGLEAFQLDYA 57

Query: 91  SLASVRKFASEFKS-SGLPLNILINNAGIMATPFM---LSKDNIELQFATNHIGHFLLTN 146
              S+    ++    SG  L+ L NN G    P     L  + +  QF  N  G   LT 
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTR 116

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            ++  M K       +GRIV  SS               I          AY  SK A  
Sbjct: 117 RVIPVMRK-----QGQGRIVQCSS---------------ILGLVPMKYRGAYNASKFA-- 154

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           +    L  R++  G  I  + + PG I T  FR 
Sbjct: 155 IEGLSLTLRMELQGSGIHVSLIEPGPIETR-FRA 187

Length = 277

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 32/216 (14%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME-LDLS 90
             VTGA+SGIG  TA  LA +G  + +  R+     +             V     LD+S
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADA--RALGGTVPEHRALDIS 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA--TPFMLSKDNIELQFATNHIG--HFLLTN 146
              +V  FA++  ++   +++++N AGI A  T   L+ +        N +G  H     
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIH----- 115

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            ++ET       + + G +VNVSS     + P                 +AY  SK   +
Sbjct: 116 -VIETFVPPMVAAGRGGHLVNVSSAAGLVALP---------------WHAAYSASKFG-L 158

Query: 207 LHTSELAR-RLKEDGVDITANSVHPGAITTNLFRNI 241
              SE+ R  L   G+ ++   V PGA+ T L   +
Sbjct: 159 RGLSEVLRFDLARHGIGVSV--VVPGAVKTPLVNTV 192

Length = 272

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 60.7 bits (148), Expect = 9e-11
 Identities = 57/218 (26%), Positives = 80/218 (36%), Gaps = 35/218 (16%)

Query: 24  GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ 83
            +D SG T  VTGA+ GIG   A      G  V+   +                 +    
Sbjct: 3   AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----------LTQEDYPFA 51

Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGH 141
              LD+S  A+V +      +   PL++L+N AGI  M     LS ++ +  FA N  G 
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           F L   ++           + G IV V S              RI         +AYG S
Sbjct: 112 FNLFRAVMPQF-----RRQRSGAIVTVGS--------NAAHVPRIG-------MAAYGAS 151

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           K A       +   L   GV    N V PG+  T++ R
Sbjct: 152 KAALTSLAKCVGLELAPYGV--RCNVVSPGSTDTDMQR 187

Length = 252

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 35/209 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGAS GIG  TAR+L   G  V +  R+ A    +  A  +E+    V  +  D+  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEA---RLAAAAAQELEG--VLGLAGDVRD 57

Query: 92  LASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
            A VR+     + +   L+ L+NNAG+  M     L+ +   L   TN  G F   +   
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF---SAYGQSKLANV 206
             + +        G IVNV S                   +G N F   +AY  SK   +
Sbjct: 118 PALLRRGG-----GTIVNVGSL------------------AGKNAFKGGAAYNASKFGLL 154

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
             +      L+E  + +   +V PG++ T
Sbjct: 155 GLSEAAMLDLREANIRVV--NVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 60.5 bits (147), Expect = 1e-10
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 31/216 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTG + GIG   A  LA  G  V +A  N    +E  K I +    A   A +LD+S
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAV--AYKLDVS 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNLL 148
               V     +        ++++NNAG+   TP + ++++ ++  +  N  G       +
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKG-------V 112

Query: 149 LETMGKTARESSKE---GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
           L  +   AR+  K+   G+I+N +S       P                 SAY  +K A 
Sbjct: 113 LFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI---------------LSAYSSTKFAV 157

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T   A+ L   G  IT N+  PG + T ++  I
Sbjct: 158 RGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEEI 191

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 54/226 (23%), Positives = 81/226 (35%), Gaps = 41/226 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TG    +G   A+ LA  G  V +  RN      V   I       +  A++ 
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKA 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAG-----------------IMATPFMLSKDNI 130
           D+    S+ +   +      P +ILIN AG                    T F L ++  
Sbjct: 67  DVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           E  F  N +G  L T +  + M        K G I+N+SS               +N  +
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVG-----RKGGNIINISS---------------MNAFT 166

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
              +  AY  +K A    T  LA    + G  I  N++ PG   T 
Sbjct: 167 PLTKVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 25/213 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-VMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
            AIVTGAS GIG   A  LA RG  + +  + +     EV   ++      +    + D+
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAA--GRRAIYFQADI 60

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATP----FMLSKDNIELQFATNHIGHFLLT 145
             L+       +       L+ L+NNAGI   P      L++D+ +   A N  G F LT
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 146 NLLLETM-GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
             +   M  +  R       I+ V+S       P              NR   Y  SK  
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSP--------------NR-GEYCISKAG 165

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             + T  LA RL ++G  I  + + PG I T++
Sbjct: 166 LSMATRLLAYRLADEG--IAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 60.4 bits (146), Expect = 1e-10
 Identities = 72/244 (29%), Positives = 103/244 (42%), Gaps = 44/244 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAME 86
            G  A+VTGAS GIG   A  LA  G  V +   RN  A  E  + I  E    K   +E
Sbjct: 5   DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI--ESNGGKAFLIE 62

Query: 87  LDLSSLASVRKFASEFKSS------GLPLNILINNAGI--MATPFMLSKDNIELQFATNH 138
            DL+S+  V+K   + K+          ++IL+NNAGI    T    +++  +   A N 
Sbjct: 63  ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNI 122

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              F L    L  +         EGR++N+SS   +  +   I               AY
Sbjct: 123 KAPFFLIQQTLPLL-------RAEGRVINISSAEVRLGFTGSI---------------AY 160

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL---------FRNISFFSGLVG 249
           G SK A    T  LA+ L E G  IT N++ PG   T++          RN +  S + G
Sbjct: 161 GLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFG 218

Query: 250 LLGK 253
            +G+
Sbjct: 219 RIGQ 222

Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 59/208 (28%), Positives = 87/208 (41%), Gaps = 29/208 (13%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG  SG+G  TA  LA  G  + +   N       K A+++  P+A+V  ++ D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL---- 148
           A V  +          ++   NNAGI        K N+   F  +     +  NL     
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEG------KQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 149 -LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            LE + K  RE    G IVN +S         GIR   + +QSG      Y  +K   V 
Sbjct: 121 GLEKVLKVMRE-QGSGMIVNTAS-------VGGIR--GVGNQSG------YAAAKHGVVG 164

Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
            T   A    + G+ I  N++ PGAI T
Sbjct: 165 LTRNSAVEYGQYGIRI--NAIAPGAILT 190

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 58/233 (24%), Positives = 86/233 (36%), Gaps = 44/233 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAME 86
              A++TG +  +G   AR LA  G  V    RN     +V     KEI     +  A+ 
Sbjct: 5   NKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKV----AKEITALGGRAIALA 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAG----------------IMATPFMLSKDNI 130
            D+   AS+ +   E  +    ++ILIN AG                     F L ++  
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           E  F  N  G FL + +  + M +      K G I+N+SS               +N  S
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLE-----QKGGSIINISS---------------MNAFS 160

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
              +  AY  +K A    T  LA      GV +  N++ PG   T   R +  
Sbjct: 161 PLTKVPAYSAAKAAVSNFTQWLAVEFATTGVRV--NAIAPGFFVTPQNRKLLI 211

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 45/214 (21%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T +VTGA+ GIG   +  LA  G  V+   R+              I +   +    DL+
Sbjct: 5   TVLVTGATKGIGLALSLRLANLGHQVIGIARSA-------------IDDFPGELFACDLA 51

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FATNHIGHFLLT 145
            +       ++      P++ ++NN GI A P  L K  I+L      +  N      +T
Sbjct: 52  DIEQTAATLAQINEIH-PVDAIVNNVGI-ALPQPLGK--IDLAALQDVYDLNVRAAVQVT 107

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              LE M     +  ++GRIVN+ SR    +       DR          ++Y  +K A 
Sbjct: 108 QAFLEGM-----KLREQGRIVNICSRAIFGAL------DR----------TSYSAAKSAL 146

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           V  T   A  L E G  IT N+V PG I T LFR
Sbjct: 147 VGCTRTWALELAEYG--ITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 42/204 (20%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA-KVQAME 86
                ++TGAS GIG   A  LA  G  +++  RN         A+   +P   + + + 
Sbjct: 4   KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE----ALAARLPYPGRHRWVV 59

Query: 87  LDLSS---LASVRKFASEFKSSGLPLNILINNAGIMATPFML----SKDNIELQFATNHI 139
            DL+S     +V   A E       +N+LINNAG+    F L      + IE   A N  
Sbjct: 60  ADLTSEAGREAVLARAREM----GGINVLINNAGV--NHFALLEDQDPEAIERLLALNLT 113

Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
               LT  LL  +            +VNV S            F  I    GY  +++Y 
Sbjct: 114 APMQLTRALLPLLRA-----QPSAMVVNVGS-----------TFGSI----GYPGYASYC 153

Query: 200 QSKLANVLHT-SE-LARRLKEDGV 221
            SK A  L   SE L R L + GV
Sbjct: 154 ASKFA--LRGFSEALRRELADTGV 175

Length = 263

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 59/215 (27%), Positives = 86/215 (40%), Gaps = 45/215 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TA+VTGA+ GIG   AR     G  V+    + AA      A    + +A+   +  DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL----AAFADALGDARFVPVACDLT 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-------TPFMLSKDNIELQFATNHIGHFL 143
             AS+    +   +   P+++L+ NAG          TP     DN     A N    +L
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADN-----ALNLEAAYL 114

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRR--HQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
               +LE M K +R     G +VN+ S        +P                  AY  +
Sbjct: 115 CVEAVLEGMLKRSR-----GAVVNIGSVNGMAALGHP------------------AYSAA 151

Query: 202 KLANVLH-TSELARRLKEDGVDITANSVHPGAITT 235
           K A ++H T  LA      G  I AN+V PG + T
Sbjct: 152 K-AGLIHYTKLLAVEYGRFG--IRANAVAPGTVKT 183

Length = 257

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 30/216 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AI+TG +SGIG  TAR+ A  G  VV+A  +  A     +A+  E+ +  +  +  D
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDA----GQAVAAELGDPDISFVHCD 59

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATP--FML--SKDNIELQFATNHIGHFLL 144
           ++  A VR       +    L+I+ NNAG++  P   +L  S +  E     N  G FL 
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLG 119

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T      M       +K+G IV+V+S         G+         G     AY  SK A
Sbjct: 120 TKHAARVMIP-----AKKGSIVSVAS-------VAGVV-------GGLGP-HAYTASKHA 159

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            +  T   A  L E G+ +  N V P  + T L   
Sbjct: 160 VLGLTRSAATELGEHGIRV--NCVSPYGVATPLLTA 193

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 28/212 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL--D 88
             ++TGAS+G+G  TAR  A RG  VV+  R      E  +A+  EI  A  +A+ +  D
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARG----EEGLEALAAEIRAAGGEALAVVAD 65

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLTN 146
           ++   +V+  A   +    P++  +NNA + +  PF  ++ +         ++G    T 
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  M    R     G I+ V S     +Y   I              SAY  +K A  
Sbjct: 126 AALRHMRPRDR-----GAIIQVGS---ALAY-RSIPLQ-----------SAYCAAKHAIR 165

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLF 238
             T  L   L  DG  ++   V P A+ T  F
Sbjct: 166 GFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF 197

Length = 334

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 59.2 bits (143), Expect = 3e-10
 Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 22/155 (14%)

Query: 32  AIVTGASSGIGTETARVLALR----GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            +VTGAS G G   A+ LA      G  +V++ RN  A R++K  I  E    +V  + L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 88  DLSSLASVRKFASEFKSSGLPLN----ILINNAGIMATPFMLSK--------DNIELQFA 135
           DL + A + +     +    P      +LINNAG   T   +SK          ++  +A
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAG---TLGDVSKGFVDLSDSTQVQNYWA 119

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            N      LT+ +L+              +VN+SS
Sbjct: 120 LNLTSMLCLTSSVLK---AFKDSPGLNRTVVNISS 151

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T ++TGA SG G E A  LA +G +V+  V+       ++    +      ++  +LDL+
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLT 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLTNLL 148
                 + A         +++L+NNAGI        +  + +   F TN  G   LT   
Sbjct: 62  DAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGF 115

Query: 149 LETMGKTARESSKEGRIVNVSS 170
           +  M   AR    +G++V  SS
Sbjct: 116 VRKM--VAR---GKGKVVFTSS 132

Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 58.9 bits (143), Expect = 4e-10
 Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 20/215 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                ++TGA+  IG    + L   G  +++A  N  A  ++K+ +   +   +V A+EL
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALEL 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI----MATPFM-LSKDNIELQFATNHIGHF 142
           D++S  S+++    +      ++ILINNA        + F     +        N  G F
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L +   ++   K       +G I+N++S     + P+     RI + +       Y   K
Sbjct: 120 LCSQAFIKLFKK-----QGKGSIINIASIYGVIA-PD----FRIYENTQMYSPVEYSVIK 169

Query: 203 LANVLH-TSELARRLKEDGVDITANSVHPGAITTN 236
            A ++H T  LA+   + G  I  N++ PG I  N
Sbjct: 170 -AGIIHLTKYLAKYYADTG--IRVNAISPGGILNN 201

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 58.4 bits (142), Expect = 5e-10
 Identities = 55/217 (25%), Positives = 83/217 (38%), Gaps = 41/217 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA++TG +SGIG ETAR     G  V +  R+ A+    +  +           +  D
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRAD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFML-SKDNIELQFATNHIGHFLLTN 146
              +A+ +  A     +   L+ +  NAG+    P     +   +  F TN  G + L  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK---- 202
            LL  +   A        ++N S                IN   G    S Y  SK    
Sbjct: 121 ALLPLLANPA------SIVLNGS----------------INAHIGMPNSSVYAASKAALL 158

Query: 203 -LANVLHTSELARRLKEDGVDITANSVHPGAITTNLF 238
            LA  L + EL  R    G+ +  N+V PG + T L+
Sbjct: 159 SLAKTL-SGELLPR----GIRV--NAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 5e-10
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G   ++TGAS GIG   A   A  G H+ +  R+  A   +   +        V    LD
Sbjct: 7   GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHALD 65

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG 117
           LSS  +  + A+E       ++IL+NNAG
Sbjct: 66  LSSPEAREQLAAEAG----DIDILVNNAG 90

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 6e-10
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D  G TA+VTG+S GIG +TA++LA  G HVV+  R  A        +V EI  A  +A 
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRAN---KVVAEIEAAGGRAS 59

Query: 86  EL--DLSSLASVRKFASEFKSSGLPLNILINNA 116
            +  DL+   SV       +     L+ L+ NA
Sbjct: 60  AVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 26/211 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            +VTGA+ GIG   AR LA  G  V    RN     E+   +            +LD++ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADL--RRYGYPFATYKLDVAD 58

Query: 92  LASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
            A+V +     +    P+++L+N AGI  +     LS ++ +  FA N  G F ++  + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M     +  + G IV V S              R+         +AY  SK A  + T
Sbjct: 119 PRM-----KRRRSGAIVTVGS--------NAANVPRMG-------MAAYAASKAALTMLT 158

Query: 210 SELARRLKEDGVDITANSVHPGAITTNLFRN 240
             L   L   G  I  N V PG+  T + R 
Sbjct: 159 KCLGLELAPYG--IRCNVVSPGSTDTEMQRQ 187

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 6e-10
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTG++ G+G E AR LA  G HV++  RN A       A+         +A+  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAF 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D++   +V    +   +    L+IL+NN G      +  L    I     T+ +   LL+
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLS 127

Query: 146 NLLLETMGKTARESSKEGRIVNVSS 170
            L  + M    R+    GRI+ ++S
Sbjct: 128 RLAAQRM---KRQGY--GRIIAITS 147

Length = 256

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 58.2 bits (141), Expect = 7e-10
 Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 24/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG++SGIG   AR LA  G ++V+     AA  E  +A +      KV     
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           DLS  A++    +  +     ++IL+NNAGI     +     +  +   A N    F  T
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            L L  M K        GRI+N++S               ++        SAY  +K   
Sbjct: 121 RLALPHMKK-----QGWGRIINIAS---------------VHGLVASANKSAYVAAKHGV 160

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           V  T  +A      GV  T N++ PG + T L   
Sbjct: 161 VGLTKVVALETAGTGV--TCNAICPGWVLTPLVEK 193

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.7 bits (140), Expect = 9e-10
 Identities = 55/217 (25%), Positives = 79/217 (36%), Gaps = 50/217 (23%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI-VKEIPNAK--V 82
           +    T ++TGA+SGIG   AR    +G  V                +  ++ P+     
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------------GVDKQDKPDLSGNF 47

Query: 83  QAMELDLSS-LASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNH 138
             ++LDLS  L  +  +           +IL N AGI+         S +  +  F TN 
Sbjct: 48  HFLQLDLSDDLEPLFDWVPSV-------DILCNTAGILDDYKPLLDTSLEEWQHIFDTNL 100

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              FLLT   L  M        K G I+N+ S               I         +AY
Sbjct: 101 TSTFLLTRAYLPQM-----LERKSGIIINMCS---------------IASFVAGGGGAAY 140

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
             SK A    T +LA    +DG  I    + PGA+ T
Sbjct: 141 TASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKT 175

Length = 235

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 22/217 (10%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTG S GIG   A+     G  V+++ R   AC +  + +       +  A+  
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAY---GECIAIPA 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPF-MLSKDNIELQFATNHIGHFLLT 145
           DLSS   +    +        L++L+NNAG     P     +   +     N    F LT
Sbjct: 62  DLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLT 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             LL  + + A  +    R++N+ S         GI        SG   +S YG SK A 
Sbjct: 122 QALLPLL-RAAATAENPARVINIGS-------IAGIVV------SGLENYS-YGASKAAV 166

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
              T +LA+ L  +   IT N++ PG   + +   + 
Sbjct: 167 HQLTRKLAKELAGE--HITVNAIAPGRFPSKMTAFLL 201

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 33/213 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGA++G+G   A  LA  G  +V A    +   E ++ +       +  ++  D
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVGA--GRSEPSETQQQVEAL--GRRFLSLTAD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL- 147
           LS + +++            ++IL+NNAGI+       +     +F+       +  NL 
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGII-------RRADAEEFSEKDWDDVMNVNLK 113

Query: 148 ----LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
               L +   K   +  + G+I+N++S     S+  GI            R  +Y  SK 
Sbjct: 114 SVFFLTQAAAKHFLKQGRGGKIINIAS---MLSFQGGI------------RVPSYTASKH 158

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           A    T  LA      G+++  N++ PG + TN
Sbjct: 159 AVAGLTKLLANEWAAKGINV--NAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.9 bits (140), Expect = 1e-09
 Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 35/223 (15%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI--PN 79
           T   D SG  A+VTGA++G+G   A  LA  G  VV  V ++A+  +    ++ EI    
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVV--VNDVASALDA-SDVLDEIRAAG 61

Query: 80  AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATP--FMLSKDNIELQFATN 137
           AK  A+  D+S  A+  +  +     G  L+I++NNAGI      F +S +  +   A +
Sbjct: 62  AKAVAVAGDISQRATADELVATAVGLG-GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVH 120

Query: 138 HIGHFLLTNLLLETMGKTARESSKE------GRIVNVSSRRHQFSYPEGIRFDRINDQSG 191
             GHFLLT           R  +K       GRIVN SS       P G        Q+ 
Sbjct: 121 LRGHFLLT----RNAAAYWRAKAKAAGGPVYGRIVNTSSEAG-LVGPVG--------QAN 167

Query: 192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
                 YG +K      T   AR L   GV   AN++ P A T
Sbjct: 168 ------YGAAKAGITALTLSAARALGRYGV--RANAICPRART 202

Length = 306

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 56/209 (26%), Positives = 83/209 (39%), Gaps = 28/209 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             +VTG+  GIG   A  LA  G  VV+  +  A        +VKE     +  +  D+S
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA-DVS 66

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDN-IELQFATNHIGHFLLTNLL 148
           +       A          +IL+NNAG+ + +PF+   D  I+   +T+       +  L
Sbjct: 67  TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQEL 126

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
                  A+E  + G IVN++S         GIR             S YG  K A +  
Sbjct: 127 -------AKEMREGGAIVNIASV-------AGIR--------PAYGLSIYGAMKAAVINL 164

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNL 237
           T  LA  L      I  N++ PG + T L
Sbjct: 165 TKYLALELAP---KIRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 57.4 bits (138), Expect = 2e-09
 Identities = 61/218 (27%), Positives = 85/218 (38%), Gaps = 31/218 (14%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D  G  A++TGAS+GIG   A      G  V +A R++ A  ++   I       KV  +
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGGKVVPV 63

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA--TNHIGHFL 143
             D+S    V     +  +    ++I + NAGI+    ML     E Q    TN  G FL
Sbjct: 64  CCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123

Query: 144 LTNLLLETMGKTARESSKEGR----IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
                  T    A+   K+G+    I   S   H  + P+ +              S Y 
Sbjct: 124 -------TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQV--------------SHYC 162

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            SK A +  T  +A  L      I  NSV PG I T L
Sbjct: 163 ASKAAVIHLTKAMAVELAPH--KIRVNSVSPGYILTEL 198

Length = 253

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 26/207 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+V GASSGIG  TA  LA  G  V +  R +  C E+   I  +   A   A  LD++
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEA--VAFPLDVT 69

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA--TPFMLSKDNIELQFATNHIGHFLLTNLL 148
              SV+ F ++ + +   + +L++ AG         +S +  E Q   + +G   L   +
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAV 129

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M +  R     G ++ V S       P                  AYG +K      
Sbjct: 130 LPGMIERRR-----GDLIFVGSDVALRQRP---------------HMGAYGAAKAGLEAM 169

Query: 209 TSELARRLKEDGVDITANSVHPGAITT 235
            + L  +++ +G  + A+ VHPG   T
Sbjct: 170 VTNL--QMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 56.8 bits (138), Expect = 2e-09
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A +TG  +GIG   A+  A  G  V +A R         + I       +   ++ 
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA-TGGRAHPIQC 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAG 117
           D+    +V     E       ++ILINNA 
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 56.5 bits (136), Expect = 3e-09
 Identities = 61/215 (28%), Positives = 86/215 (40%), Gaps = 26/215 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
             TAIVTG   GIG  T R  A  G  V +   N  A  +V   I  +  NA  QA   D
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNA--QAFACD 60

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLS-KDNIELQFATNHIGHFLLTN 146
           ++   SV    +  + +  P+++L+NNAG     PF  +     E   A N  G   + +
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M +        GRIVN++S                  + G +  + Y   K   V
Sbjct: 121 AVLPGMVE-----RGAGRIVNIASDA---------------ARVGSSGEAVYAACKGGLV 160

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             +  +AR     G  IT N V PG   T L  +I
Sbjct: 161 AFSKTMAREHARHG--ITVNVVCPGPTDTALLDDI 193

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 65/217 (29%), Positives = 89/217 (41%), Gaps = 45/217 (20%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGA+ GIG   A VLA  G HVV    ++ A  E   A+   +      A+ LD
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAVANRV---GGTALALD 264

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI--------MATPFMLSKDNIELQFATNHIG 140
           +++  +  + A         L+I+++NAGI        M      S   + L        
Sbjct: 265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLL------A 318

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF-SAYG 199
              +T  LL        +    GRIV VSS               I+  +G NR  + Y 
Sbjct: 319 PLRITEALLA--AGALGDG---GRIVGVSS---------------ISGIAG-NRGQTNYA 357

Query: 200 QSKLANVL-HTSELARRLKEDGVDITANSVHPGAITT 235
            SK A V+     LA  L E G  IT N+V PG I T
Sbjct: 358 ASK-AGVIGLVQALAPLLAERG--ITINAVAPGFIET 391

Length = 450

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 28/210 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             I+TGAS GIG   A  LA  G  +V+A RN      + + +      A V     D+S
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP--TDVS 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDNIELQ--FATNHIGHFLLTNL 147
              +  +      +    ++IL+NNAGI M + F    D    +     N++G    T+ 
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            L  +  +       G+IV VSS               +   +G    S Y  SK A   
Sbjct: 121 ALPHLKAS------RGQIVVVSS---------------LAGLTGVPTRSGYAASKHALHG 159

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNL 237
               L   L +DGV +T   V PG + T++
Sbjct: 160 FFDSLRIELADDGVAVTV--VCPGFVATDI 187

Length = 263

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 25/211 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHV-VMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
            A+VTG   GIG   AR LA  G  + +    +       ++ +       +V     D+
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADV 61

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATP----FMLSKDNIELQFATNHIGHFLLT 145
           + L++        +++   ++ L+NNAG+          L+ ++ +   A N  G F LT
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 146 NLLLETM-GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
             + + M  +   E      IV VSS       P              NR   Y  SK  
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP--------------NR-GEYCISKAG 166

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
             +     A RL E+G  I    V PG I T
Sbjct: 167 LSMAAQLFAARLAEEG--IGVYEVRPGLIKT 195

Length = 256

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 19/155 (12%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN----MAACREVKKAIVKEIPNAK 81
           D +G  A++TGA+SG G   AR+ A  G+ +V+A         A  E++         A+
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ------GAE 56

Query: 82  VQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHI 139
           V  +  D+S  A V   A         +++L NNAG+ A   +      + +     N  
Sbjct: 57  VLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW 116

Query: 140 GHF----LLTNLLLETMGKTARESSKEGRIVNVSS 170
           G        T L+L    K     + EG IVN +S
Sbjct: 117 GVIHGVRAFTPLMLAAAEKDP---AYEGHIVNTAS 148

Length = 287

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 35/225 (15%)

Query: 15  SSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIV 74
           +STA+  +   + S     +TG + GIG   A   A  G  +++  R+    +++ +A+ 
Sbjct: 256 ASTAQAPSPLAE-SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314

Query: 75  KEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKD----NI 130
            E  + +      D++  A+V    ++ ++    L++L+NNAG +A  F  S +    + 
Sbjct: 315 DEHLSVQA-----DITDEAAVESAFAQIQARWGRLDVLVNNAG-IAEVFKPSLEQSAEDF 368

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
              +  N  G F             AR  S+ G IVN+ S               I    
Sbjct: 369 TRVYDVNLSGAF-------ACARAAARLMSQGGVIVNLGS---------------IASLL 406

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                +AY  SK A  + +  LA      G  I  N+V PG I T
Sbjct: 407 ALPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIET 449

Length = 520

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 61/219 (27%), Positives = 84/219 (38%), Gaps = 41/219 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAV----RNMAACREVKKAIVKEIPNAKVQA 84
           G  A++TG  SGIG   A   A  G  V +       + A   E KK I +E     +  
Sbjct: 26  GKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDA--EETKKLIEEEGRKCLLIP 83

Query: 85  MELDLSSLA--SVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHI 139
            +L   S     V++   EF      L+IL+NNA        +   + + +E  F TN  
Sbjct: 84  GDLGDESFCRDLVKEVVKEFGK----LDILVNNAAYQHPQESIEDITTEQLEKTFRTNIF 139

Query: 140 GHFLLTNLLLETMGKTARESSKEG-RIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
             F LT        K A    K+G  I+N +S               +    G      Y
Sbjct: 140 SMFYLT--------KAALPHLKKGSSIINTTS---------------VTAYKGSPHLLDY 176

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +K A V  T  L+ +L E G  I  N+V PG I T L
Sbjct: 177 AATKGAIVAFTRGLSLQLAEKG--IRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 43/216 (19%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TA++TGAS GIG   AR LA     +++  R      E+      E+P A      +DL+
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDEL----AAELPGA--TPFPVDLT 57

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLL 148
              ++   A+  +  G  L++L++NAG+  +      + D        N +    LT LL
Sbjct: 58  DPEAI---AAAVEQLG-RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNR---FSAYGQSKLAN 205
           L  +    R +   G +V                   IN  +G      + +Y  SK A 
Sbjct: 114 LPAL----RAA--HGHVV------------------FINSGAGLRANPGWGSYAASKFAL 149

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                 L  R +E G  +   SVHPG   T++ R +
Sbjct: 150 RALADAL--REEEPGN-VRVTSVHPGRTDTDMQRGL 182

Length = 227

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 28/208 (13%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VTGAS GIG E A   A  G  V++  RN    R+V   I  E    + Q   LDL + 
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHI-NEEGGRQPQWFILDLLTC 66

Query: 93  AS--VRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIG---HFLLTNL 147
            S   ++ A     +   L+ +++NAG++     LS+ N ++      +     F+LT  
Sbjct: 67  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQA 126

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           LL  + K     S  G +V  SS                  + G   + AY  SK A   
Sbjct: 127 LLPLLLK-----SDAGSLVFTSSS---------------VGRQGRANWGAYAVSKFATEG 166

Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
               LA   +    ++  N ++PG   T
Sbjct: 167 LXQVLADEYQ--QRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 55/224 (24%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--- 85
           G  AI+TGA +GIG E A   A  G  VV++  N     +    +V EI     QA    
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN----ADAANHVVDEIQQLGGQAFACR 66

Query: 86  -----ELDLSSL--ASVRKFASEFKSSGLPLNILINNAGIMA-TPFMLSKDNIELQFATN 137
                E +LS+L   ++ K           ++IL+NNAG     PF +   +    +  N
Sbjct: 67  CDITSEQELSALADFALSKLGK--------VDILVNNAGGGGPKPFDMPMADFRRAYELN 118

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN---R 194
               F L+ L+   M     E +  G I+ ++S                   +  N    
Sbjct: 119 VFSFFHLSQLVAPEM-----EKNGGGVILTITS------------------MAAENKNIN 155

Query: 195 FSAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTN 236
            ++Y  SK A     S L R +  D    +I  N + PGAI T+
Sbjct: 156 MTSYASSKAA----ASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195

Length = 255

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 53/211 (25%), Positives = 80/211 (37%), Gaps = 35/211 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL- 87
           G  AIVTG   GIG +        G  VV A  +     +  +A   E PN      ++ 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEA---EGPNLFFVHGDVA 57

Query: 88  DLSSLA-SVRKFASEFKSSGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLL 144
           D + +   V     +       +++L+NNA   +      L  +  +   + N  G + L
Sbjct: 58  DETLVKFVVYAMLEKLGR----IDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYEL 113

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           +    + + K       +GRI+N++S R   S P+                 AY  SK  
Sbjct: 114 SRYCRDELIK------NKGRIINIASTRAFQSEPDS---------------EAYAASKGG 152

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
            V  T  LA  L   G DI  N + PG I T
Sbjct: 153 LVALTHALAMSL---GPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 29/210 (13%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ----AMEL 87
           A +TGA+ G+G   AR +A +G  V +   N AA      A   EI  A  +    A   
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAA---GLDAFAAEINAAHGEGVAFAAVQ 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  A  +   ++   +   L++L+NNAG+        +  D      A N    FL  
Sbjct: 59  DVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  +      +S+   IVN+SS          +   +         ++AY  SK A 
Sbjct: 119 KHALPYLR-----ASQPASIVNISS----------VAAFKAEPD-----YTAYNASKAAV 158

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
              T  +A      G+D+  NS+HP  I T
Sbjct: 159 ASLTKSIALDCARRGLDVRCNSIHPTFIRT 188

Length = 251

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 34/209 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A++T A+ GIG   A   A  G +V+    N    +E+++          +    LD
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERG-------PGITTRVLD 54

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA--TNHIGHFLLTN 146
           ++    V   A E       +++L N AG +    +L  ++ +  FA   N    +L+  
Sbjct: 55  VTDKEQVAALAKEEGR----IDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M        K+G I+N+SS                  +   NRF  Y  +K A +
Sbjct: 111 AVLPKMLA-----RKDGSIINMSSVASSI-------------KGVPNRF-VYSTTKAAVI 151

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
             T  +A    + G  I  N++ PG + T
Sbjct: 152 GLTKSVAADFAQQG--IRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 33/214 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG  SG G   A+ L   G  V+            K+  ++ + + +++ ++LD++  
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGC-LTKNGPGAKE--LRRVCSDRLRTLQLDVTKP 60

Query: 93  ASVRKFASEFKSSGLP---LNILINNAGIMATP---FMLSKDNIELQFATNHIGHFLLTN 146
             +++ A+++    +    L  L+NNAGI+       +L  D+       N  G   +T 
Sbjct: 61  EQIKR-AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTK 119

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  + + A+     GR+VNVSS   +  +P G                AY  SK A  
Sbjct: 120 AFL-PLLRRAK-----GRVVNVSSMGGRVPFPAG---------------GAYCASKAAVE 158

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             +  L R L+  GV ++   + PG   T +  N
Sbjct: 159 AFSDSLRRELQPWGVKVSI--IEPGNFKTGITGN 190

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 59/238 (24%), Positives = 92/238 (38%), Gaps = 49/238 (20%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI-VKEIPNAKVQAMELDLS 90
            I+TG S G+G   A  L  +G HV+   R      E K+   + E  N+ +    LDL 
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISR-----TENKELTKLAEQYNSNLTFHSLDLQ 58

Query: 91  SLASVRKFASEFKSSGLPLNI----LINNAGIMATPF----MLSKDNIELQFATNHIGHF 142
            +  +    +E  SS    N+    LINNAG M  P         + +      N +   
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAG-MVAPIKPIEKAESEELITNVHLNLLAPM 117

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           +LT+  +    K  ++   + R++N+SS   +  Y                 +SAY  SK
Sbjct: 118 ILTSTFM----KHTKDWKVDKRVINISSGAAKNPYFG---------------WSAYCSSK 158

Query: 203 LANVLHTSELA--RRLKEDGVDITANSVHPGAITTNL-----------FRNISFFSGL 247
               + T  +A  +  +E  V I A    PG + TN+           F N+  F  L
Sbjct: 159 AGLDMFTQTVATEQEEEEYPVKIVA--FSPGVMDTNMQAQIRSSSKEDFTNLDRFITL 214

Length = 251

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 31/209 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T ++TG SSG G   A+     G  VV  VR+ AA    +       P  +  A  LD++
Sbjct: 6   TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA----RADFEALHP-DRALARLLDVT 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIEL--QFATNHIGHFLLTNLL 148
              ++    ++ +++  P+++L+NNAG      +      E+  QF  N  G   +T  +
Sbjct: 61  DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M   AR     G IVN++S     + P GI                Y  SK A +  
Sbjct: 121 LPGM--RARRR---GHIVNITSMGGLITMP-GI--------------GYYCGSKFA-LEG 159

Query: 209 TSE-LARRLKEDGVDITANSVHPGAITTN 236
            SE LA+ +   G+ +TA  V PG+  T+
Sbjct: 160 ISESLAKEVAPFGIHVTA--VEPGSFRTD 186

Length = 277

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 27/210 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTG ++G+G   A  LA  G  +++         E ++ I KE    KV  +++D
Sbjct: 15  GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVD 71

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG-IMATPFMLSKD-NIELQFATNHIGHFLLTN 146
           L+   S  K   E       ++IL+NNAG I   P +  KD +       N    + L+ 
Sbjct: 72  LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            + + M K        G+I+N++S     S+  G                AY  SK    
Sbjct: 132 AVAKVMAK-----QGSGKIINIAS---MLSFQGGK------------FVPAYTASKHGVA 171

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
             T   A  L    + +  N++ PG I T 
Sbjct: 172 GLTKAFANELAAYNIQV--NAIAPGYIKTA 199

Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 32/209 (15%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           +TGA+SG+G   A   A  G  + +A  N     E  K + +   +   Q    D+   +
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQ--RCDVRDYS 62

Query: 94  SVRKFAS--EFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLLL 149
            +   A   E K  G  +++++NNAG+ +  F   LS ++ + Q A N +G        L
Sbjct: 63  QLTALAQACEEKWGG--IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
                   +  K GRIVN++S       P                 S+Y  +K A V+  
Sbjct: 121 PLF-----KRQKSGRIVNIASMAGLMQGPA---------------MSSYNVAK-AGVVAL 159

Query: 210 SE-LARRLKEDGVDITANSVHPGAITTNL 237
           SE L   L +D + +    V P    TNL
Sbjct: 160 SETLLVELADDEIGVHV--VCPSFFQTNL 186

Length = 270

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 25/212 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGA  GIG   A+ L   G  V +   N    +     + K+   A   A++ D+S 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKA--IAVKADVSD 62

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIM-ATPF-MLSKDNIELQFATNHIGHFLLTNLLL 149
              V     +   +   LN+++NNAG+   TP   ++++  +  +  N  G         
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQ 122

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
           E      ++    G+I+N +S+      PE                + Y  +K A    T
Sbjct: 123 EAF----KKLGHGGKIINATSQAGVVGNPE---------------LAVYSSTKFAVRGLT 163

Query: 210 SELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              AR L  +G  IT N+  PG + T +  +I
Sbjct: 164 QTAARDLASEG--ITVNAYAPGIVKTPMMFDI 193

Length = 256

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 57/215 (26%), Positives = 85/215 (39%), Gaps = 35/215 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TG SSGIG   A      G  V    R        K   V+ +  A   A++LD++
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATAR--------KAEDVEALAAAGFTAVQLDVN 54

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS--KDNIELQFATNHIGHFLLTNLL 148
             A++ + A E ++    L++LINNAG  A   +L    + +  QF TN      +T  L
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS-AYGQSKLANVL 207
              + +        G +VN+ S       P                F+ AY  SK A  +
Sbjct: 115 FPLLRR------SRGLVVNIGSVSGVLVTP----------------FAGAYCASKAA--V 150

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           H    A RL+     +    V PGAI +    N S
Sbjct: 151 HALSDALRLELAPFGVQVMEVQPGAIASQFASNAS 185

Length = 274

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 52.4 bits (125), Expect = 7e-08
 Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 37/219 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL- 87
           G  A+VTGAS GIG   A+ LA  G  V +   N    +E  +  V EI +    A  + 
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR---KEEAEETVYEIQSNGGSAFSIG 60

Query: 88  -DLSSLASVRKFASEF------KSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNH 138
            +L SL  V    S        ++     +ILINNAGI    F+   ++   +   + N 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              F +    L  +    R++S   RI+N+SS   + S P+               F AY
Sbjct: 121 KAPFFIIQQALSRL----RDNS---RIINISSAATRISLPD---------------FIAY 158

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +K A    T  LA++L   G  IT N++ PG I T++
Sbjct: 159 SMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 56/209 (26%), Positives = 84/209 (40%), Gaps = 26/209 (12%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
              A+VTGA  G+G   A   A  G  V++A R  +   EV + I      A V A   D
Sbjct: 10  DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA--D 67

Query: 89  LSSLASVRKFASEFKSSGLPLNILINN-AGIMATPFM-LSKDNIELQFATNHIGHFLLTN 146
           L+   +    A +   +   L+I++NN  G M  P +  S  ++   F  N      LT 
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             +  M     E S  G ++N+SS   + +                  F+AYG +K A  
Sbjct: 128 AAVPLM----LEHSGGGSVINISSTMGRLAGRG---------------FAAYGTAKAALA 168

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
            +T   A  L      I  N++ PG+I T
Sbjct: 169 HYTRLAALDLCP---RIRVNAIAPGSILT 194

Length = 263

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 41/219 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA+VTGA+SGIG E A  LA  G  V +A  N      V   I K     K   + +D
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMD 64

Query: 89  LSSL----ASVRKFASEFKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNH 138
           +++     A + K A  F S    ++IL++NAGI          F   K       A + 
Sbjct: 65  VTNEDAVNAGIDKVAERFGS----VDILVSNAGIQIVNPIENYSFADWKKMQ----AIHV 116

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
            G FL T   L+ M K  R     G ++ + S               ++        SAY
Sbjct: 117 DGAFLTTKAALKHMYKDDR----GGVVIYMGS---------------VHSHEASPLKSAY 157

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +K   +     LA   +    ++ ++ V PG + T L
Sbjct: 158 VTAKHGLLGLARVLA--KEGAKHNVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D +G  A+VTG+S GIG   A  LA  G  V++  R+ A      +++  +       A+
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHAL 64

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI 118
             D++   +VR     F++   P++IL+NNAG+
Sbjct: 65  AFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGM 97

Length = 255

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 52/209 (24%), Positives = 73/209 (34%), Gaps = 34/209 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGA+  IG   A  LA  G  VV+      A  +  K  +  + N     ++ DLS
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRN-SAVLVQADLS 60

Query: 91  SLAS----VRKFASEFKSSGLPLNILINNAGI-MATP-FMLSKDNIELQFATNHIGHFLL 144
             A+    V      F       ++L+NNA     TP    S+D     F  N    +LL
Sbjct: 61  DFAACADLVAAAFRAFGR----CDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLL 116

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  +  +       G I+N+               DR         + AY  SK A
Sbjct: 117 IQAFARRLAGSRN-----GSIINIID----------AMTDR-----PLTGYFAYCMSKAA 156

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAI 233
               T   A  L     +I  N + PG I
Sbjct: 157 LEGLTRSAALEL---APNIRVNGIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 54/222 (24%), Positives = 82/222 (36%), Gaps = 47/222 (21%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRN----MAACREVKKAIVKEIPNAKVQAMEL 87
           AIVTG S G+G   A  L   G+ V+   R+    +AA               ++  +EL
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAA-----------GERLAEVEL 52

Query: 88  DLSSLASVRKFASEFKSSGLPLN----ILINNAGI---MATPFMLSKDNIELQFATNHIG 140
           DLS  A+   + +    +         +LINNAG    +     L    I      N   
Sbjct: 53  DLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAA 112

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
             +LT  L +     A     E RI+++SS   + +Y             G+   S Y  
Sbjct: 113 PLMLTAALAQAASDAA-----ERRILHISSGAARNAYA------------GW---SVYCA 152

Query: 201 SKLANVLHTSELARRLKEDGVD-ITANSVHPGAITTNLFRNI 241
           +K A   H    AR +  D    +   S+ PG + T +   I
Sbjct: 153 TKAALDHH----ARAVALDANRALRIVSLAPGVVDTGMQATI 190

Length = 243

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 59/220 (26%), Positives = 84/220 (38%), Gaps = 36/220 (16%)

Query: 24  GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ 83
            ID SG  A  T +S GIG   ARVLA  G  V++  RN    ++ ++ I K   N  V 
Sbjct: 3   KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI-KSESNVDVS 61

Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM-LSKDNIELQFATNHIGHF 142
            +  DL+    + +   E K+ G P     +  G     FM +S ++ E           
Sbjct: 62  YIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAV 121

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            LT  L+  M     E    GRI+  +S   +   P                        
Sbjct: 122 YLTRALVPAM-----ERKGFGRIIYSTSVAIKEPIP---------------------NIA 155

Query: 203 LANVLHTS------ELARRLKEDGVDITANSVHPGAITTN 236
           L+NV+  S       LA+ L   G  IT N + PG I T+
Sbjct: 156 LSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTD 193

Length = 263

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 27/215 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A+VTG ++GIG  TA   A  G  VV+A R+ A   E    I +E    +   +  
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALI-REA-GGEALFVAC 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHIGHFLL 144
           D++  A V+    +  ++   L+   NNAGI      L   S+   +     N  G +L 
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLC 123

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               +  M          G IVN +S               +       + S Y  SK A
Sbjct: 124 MKYQIPLMLAQG-----GGAIVNTAS---------------VAGLGAAPKMSIYAASKHA 163

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            +  T   A    + G+ +  N+V P  I T++FR
Sbjct: 164 VIGLTKSAAIEYAKKGIRV--NAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 63/222 (28%), Positives = 92/222 (41%), Gaps = 39/222 (17%)

Query: 31  TAIVTGASSGIGTE-TARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           T  +TGASSG G   T R+LA RG  V   VR   A  ++K          ++  ++LD+
Sbjct: 4   TWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDV 57

Query: 90  SSLASVRK-FASEFKSSGLPLNILINNAG--IMATPFMLSKDNIELQFATNHIGHFLLTN 146
           +  A+VR      F + G  ++++++NAG  +      LS   I  Q  TN IG   +  
Sbjct: 58  TDSAAVRAVVDRAFAALG-RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR 116

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  +          GRIV VSS   Q +YP                FS Y  +K    
Sbjct: 117 AALPHL-----RRQGGGRIVQVSSEGGQIAYPG---------------FSLYHATKWGIE 156

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV 248
                +A+ +   G++ T   V PG   TN      F +GL 
Sbjct: 157 GFVEAVAQEVAPFGIEFTI--VEPGPARTN------FGAGLD 190

Length = 276

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 31/214 (14%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVKEIPNAKVQ 83
            D SG  A+VTGAS GIG E AR+L  +G     A+  +   R E  +A+  E+   +V+
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQG-----AIVGLHGTRVEKLEALAAELGE-RVK 55

Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGH 141
               +LS    V+    + ++    ++IL+NNAGI        +S ++ +     N    
Sbjct: 56  IFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTAT 115

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           F LT  L   M +      + GRI+N++S               +   +G    + Y  S
Sbjct: 116 FRLTRELTHPMMR-----RRYGRIINITS---------------VVGVTGNPGQANYCAS 155

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           K   +  +  LA+ +     ++T N V PG I +
Sbjct: 156 KAGMIGFSKSLAQEIATR--NVTVNCVAPGFIES 187

Length = 245

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           +TGA+SGIG  TA + A  G  V     N A    +      E+         LD++  A
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALA----AELGAGNAWTGALDVTDRA 61

Query: 94  SVRKFASEF-KSSGLPLNILINNAGI 118
           +     ++F  ++G  L++L NNAGI
Sbjct: 62  AWDAALADFAAATGGRLDVLFNNAGI 87

Length = 260

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 30/212 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TG + GIG   A      G  V +            +A  KE+    V  ++ 
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYN-----SAENEA--KELREKGVFTIKC 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMAT-PF-MLSKDNIELQFATNHIGHFLLT 145
           D+ +   V+K     +     +++L+NNAGIM   PF    ++        N  G    T
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  +     + SK G IVN++S     +  EG  F              Y  +K   
Sbjct: 119 YEFLPLL-----KLSKNGAIVNIASNAGIGTAAEGTTF--------------YAITKAGI 159

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           ++ T  LA  L + G  I  N+V PG + T++
Sbjct: 160 IILTRRLAFELGKYG--IRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQA--MELD 88
           A+VTG + G+G   AR  A RG   ++   RN     E  +A   E+     +A  ++ D
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRN----AEKGEAQAAELEALGAKAVFVQAD 64

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLTN 146
           LS +   R+  +    +   L+ L+N AG+     +L  S +  +  FA N    F L  
Sbjct: 65  LSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQ 124

Query: 147 LLLETMGKTARESSKEGRIVNVSS 170
             ++ M    R    EG IVN+ S
Sbjct: 125 EAIKLM----RRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  AI+TGASSGIG   A++ A  G  VV+  R  A   ++   I  E   A   A ++
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDV 64

Query: 88  DLSSLAS--VRKFASEFKSSGLPLNILINNAGIM 119
              + A   V      F      L+I  NNAG +
Sbjct: 65  RDEAYAKALVALAVERFGG----LDIAFNNAGTL 94

Length = 254

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 40/218 (18%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMEL 87
           G  A++TG  SGIG   A + A  G  + +   +      E K+ + KE    K   +  
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPG 103

Query: 88  DLSSLA----SVRKFASEFKSSGLPLNILINNAG--IMATPFM-LSKDNIELQFATNHIG 140
           D+S  A    +V +   E       L+IL+NNA           ++ + ++  F TN   
Sbjct: 104 DVSDEAFCKDAVEETVRELGR----LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYS 159

Query: 141 HFLLTNLLLETMGKTARESSKEGR-IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
           +F +T        K A    K+G  I+N  S               I    G      Y 
Sbjct: 160 YFHMT--------KAALPHLKQGSAIINTGS---------------ITGYEGNETLIDYS 196

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            +K A    T  LA+ L + G  I  N+V PG I T L
Sbjct: 197 ATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 30/210 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMEL 87
           G TA++TG++ GIG   A+     G  V +A  N+ A R    A   EI P A   A+ L
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAAR----ATAAEIGPAA--CAISL 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  AS+ +  +        ++IL+NNA +  +A    +++++ +  FA N  G   + 
Sbjct: 57  DVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMM 116

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +   M    R     G+I+N++S+        G R        G      Y  +K A 
Sbjct: 117 QAVARAMIAQGR----GGKIINMASQ-------AGRR--------GEALVGVYCATKAAV 157

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           +  T      L   G+++  N++ PG +  
Sbjct: 158 ISLTQSAGLNLIRHGINV--NAIAPGVVDG 185

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 47/212 (22%), Positives = 79/212 (37%), Gaps = 34/212 (16%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDLSSL 92
           VTGA  GIG E A   A  G  V++  R       V   I     P   +  ++L  ++ 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATP 76

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMA--TPF-MLSKDNIELQFATNHIGHFLLTNLLL 149
            + ++ A   +     L+ +++NAG++    P      +  +     N    F+LT  LL
Sbjct: 77  QNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALL 136

Query: 150 ETMGKTARESSKEGRIVNVSSR--RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
             + K     S    +V  SS   R   +                  + AY  SK A   
Sbjct: 137 PLLLK-----SPAASLVFTSSSVGRQGRAN-----------------WGAYAVSKFA--- 171

Query: 208 HTSELARRLKE--DGVDITANSVHPGAITTNL 237
            T  + + L +   G ++  N ++PG   T +
Sbjct: 172 -TEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202

Length = 247

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 31/157 (19%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG + GIG   A  LA +G+++V+  RN    ++V  +I  +    +++ + +D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 89  LSSLASVRKFASEFKSS--GLPLNILINNAGIMATPFM-------------LSKDNIELQ 133
            S    + +     K +  GL + +LINN G ++ P+              L K N+E  
Sbjct: 113 FS--GDIDEGVKRIKETIEGLDVGVLINNVG-VSYPYARFFHEVDEELLKNLIKVNVE-- 167

Query: 134 FATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
             T  +   +L  +L            K+G I+N+ S
Sbjct: 168 -GTTKVTQAVLPGML----------KRKKGAIINIGS 193

Length = 320

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 48/213 (22%), Positives = 73/213 (34%), Gaps = 36/213 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   +V+G   G+G   A   A  G  VV+A R      EV   I       +  A+  
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPT 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FATNHIGHF 142
           D++         +        ++ L+NNA     P M    + +          N +G  
Sbjct: 62  DITDEDQCANLVALALERFGRVDALVNNA--FRVPSMKPLADADFAHWRAVIELNVLGTL 119

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSR--RHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            LT      + ++       G IV ++S   RH                    ++ AY  
Sbjct: 120 RLTQAFTPALAES------GGSIVMINSMVLRHSQP-----------------KYGAYKM 156

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAI 233
           +K A +  +  LA  L   G  I  NSV PG I
Sbjct: 157 AKGALLAASQSLATELGPQG--IRVNSVAPGYI 187

Length = 258

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 26/123 (21%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAA-------CREVKKAIVKEIPNAKVQAM 85
           ++TGASSGIG  TA   A RG  +V+A R+  A       CR +          A+V  +
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL---------GAEVLVV 61

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHI 139
             D++    V+  A++  S G  +++ +NN G+ A      TP    +  I+    TN I
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQ----TNLI 117

Query: 140 GHF 142
           G+ 
Sbjct: 118 GYM 120

Length = 330

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 36/214 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             +VTGAS G+G   AR  A  G  VV+   N     E  +A+  E    +  A++ D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVV---NYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM----LSKDNIEL-----QFATNHIGH 141
               V+    E K+   P++ ++NNA ++  PF      + D I+      Q      G 
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGA 116

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
             L   +L        +    GR++N+ +   Q                    +  Y  +
Sbjct: 117 LNLLQAVLPDF-----KERGSGRVINIGTNLFQNPVVP---------------YHDYTTA 156

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           K A +  T  +A+ L   G  IT N V  G +  
Sbjct: 157 KAALLGFTRNMAKELGPYG--ITVNMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             I+TG SSG+G   A+  A  G +VV+  R      E K  I  E    +V  +++D+ 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVR 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNA 116
           +   V+K   +       ++ LINNA
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 46/221 (20%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVM-----AVRNMAACREVKKAIVKEIPNAKVQ 83
           G   +VTGA  G+G   A   A RG  VV+       +           +V EI  A  +
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK 64

Query: 84  AMELDLSSLASVRK-FASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIG 140
           A+  +  S+    K   +   + G  ++IL+NNAGI+        S+++ +L    +  G
Sbjct: 65  AVA-NYDSVEDGEKIVKTAIDAFG-RVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKG 122

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF--SAY 198
            F +T      M K      K GRI+N SS         G+          Y  F  + Y
Sbjct: 123 SFKVTRAAWPYMRK-----QKFGRIINTSS-------AAGL----------YGNFGQANY 160

Query: 199 GQSK-----LANVLHTSELARRLKEDGVDITANSVHPGAIT 234
             +K     L+N L   E A+       +IT N++ P A +
Sbjct: 161 SAAKLGLLGLSNTL-AIEGAKY------NITCNTIAPAAGS 194

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 31  TAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEI--PNAKVQAMEL 87
           T +VTG   G+G E AR LA RG  H+V+  R+  A     +A++ E+    A+V  +  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRS-GAPDPEAEALLAELEARGAEVTVVAC 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKD 128
           D+S   +VR   +E ++ G PL  +I+ AG++    + +  
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMT 101

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 27/154 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   IVTG SSGIG    + L   G +VV A        ++      +  +   Q +  
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVVNA--------DIHGG---DGQHENYQFVPT 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-----------ATPFMLSKDNIELQFAT 136
           D+SS   V    +E       ++ L+NNAGI            A  + L++   +  F  
Sbjct: 57  DVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNI 116

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
           N  G FL++  +   M         +G IVN+SS
Sbjct: 117 NQKGVFLMSQAVARQM-----VKQHDGVIVNMSS 145

Length = 266

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A++TG  SGIG  TAR LA  G  VV+   +  A     KA   E+    V     
Sbjct: 6   AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA----GKAAADEVGGLFVPT--- 58

Query: 88  DLSSLASVRK-FASEFKSSGLPLNILINNAGI 118
           D++   +V   F +  ++ G  ++I  NNAGI
Sbjct: 59  DVTDEDAVNALFDTAAETYG-SVDIAFNNAGI 89

Length = 255

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 40/214 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK--VQAM 85
           +G  A+VTG + GIG  T   L   G  VV   R+             ++P     V A 
Sbjct: 8   AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD----------DLPEGVEFVAA- 56

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATP---FM-LSKDNIELQFATNHIGH 141
             DL++       A         ++IL++  G  + P   F  L+ +  + +   N +  
Sbjct: 57  --DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAA 114

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
             L   LL  M   AR S   G I++V+S + +   PE                +AY  +
Sbjct: 115 VRLDRALLPGM--IARGS---GVIIHVTSIQRRLPLPES--------------TTAYAAA 155

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           K A   ++  L++ +   GV +  N+V PG I T
Sbjct: 156 KAALSTYSKSLSKEVAPKGVRV--NTVSPGWIET 187

Length = 260

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           IVTG S GIG    R     G  VV   R  AA + ++  + +  P +    +  D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTKE 71

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
             ++   S        ++ L+NNAG      T    S          N I +FL +   L
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYAL 131

Query: 150 ETMGKTARESSKEGRIVNVSS 170
             + K+      +G I+N+SS
Sbjct: 132 PHLRKS------QGNIINLSS 146

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TGASSG+G   AR  A +G  + +  R      E+K  ++   P  KV    LD++  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 93  ASVRKFASEFKSSGLPLNILINNAGI 118
             V +  +EF+     L+ +I NAGI
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 46/214 (21%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           AIVTG S GIG      L   G +V+    N           +KE     V   ++D+S+
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVI----NFD---------IKEPSYNDVDYFKVDVSN 55

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNLLL 149
              V K      S    ++IL+NNAGI +   + + +  E       N  G FL++   +
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTI 115

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M K       +G I+N++S               +   +     +AY  SK A +  T
Sbjct: 116 PYMLKQ-----DKGVIINIAS---------------VQSFAVTRNAAAYVTSKHAVLGLT 155

Query: 210 SELARRLKEDGVD----ITANSVHPGAITTNLFR 239
             +A       VD    I   +V PG+I T L  
Sbjct: 156 RSIA-------VDYAPTIRCVAVCPGSIRTPLLE 182

Length = 258

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A VTGA SGIG   A  LA  G  V +         +      + I  A  +A+++
Sbjct: 7   DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL---RTDDGLAETAEHIEAAGRRAIQI 63

Query: 88  --DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFL 143
             D++S A +R   +  ++    L + +N AGI  A P   + ++  +     N  G FL
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFL 123

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                   M +        G IVN++S         GI  +R   Q+ YN       +  
Sbjct: 124 SCQAEARAMLENGG-----GSIVNIASM-------SGIIVNRGLLQAHYN-------ASK 164

Query: 204 ANVLHTSE-LARRLKEDGVDITANSVHPGAITT 235
           A V+H S+ LA      G  I  NS+ PG   T
Sbjct: 165 AGVIHLSKSLAMEWVGRG--IRVNSISPGYTAT 195

Length = 254

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G   +VTGA+ GIG E AR L  RG  + +     A    +   +  +     V A   D
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVA---D 65

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI 118
           ++ LA+++  A E       +++++ NAGI
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 54/213 (25%), Positives = 78/213 (36%), Gaps = 34/213 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI--PNAKVQAM 85
            G   +VTGA+ GIG   A  LA  G  V++  R+     E+   ++ EI          
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-----ELVHEVLAEILAAGDAAHVH 57

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFM-LSKDNIELQFATNHIGHF 142
             DL + A  +            +++LINN G  I A P+    ++ IE +   +     
Sbjct: 58  TADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTL 117

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
                +L  M    R+    G IVNVSS               I  +  Y     Y  +K
Sbjct: 118 WCCRAVLPHM--LERQQ---GVIVNVSS---------------IATRGIYR--IPYSAAK 155

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                 T+ LA     DG  I  N+V PG    
Sbjct: 156 GGVNALTASLAFEHARDG--IRVNAVAPGGTEA 186

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 13/145 (8%)

Query: 31  TAIVTGASSGIGTETARVLA---LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
             ++TG SSGIG   A  LA    +   V   +R++     + +A    +    ++ ++L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQL 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D+    SV             +++L+ NAG+  +     LS+D +   F  N  G   + 
Sbjct: 61  DVCDSKSVAAAVERVT--ERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSS 170
              L  M +        GRI+  SS
Sbjct: 119 QAFLPDMKR-----RGSGRILVTSS 138

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 23/89 (25%), Positives = 45/89 (50%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G T ++TGA   IG+   + +   G  V+ A  +  A  E+ +++ KE  + K+  +EL
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNA 116
           D++   S+ +F S+       ++  +N A
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 56/221 (25%), Positives = 77/221 (34%), Gaps = 46/221 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T ++TGA+SGIG  TA +L   G  V+         RE           A V A   DLS
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI-----GIDLRE-----------ADVIA---DLS 41

Query: 91  SLASVRK-FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
           +        A         L+ L+N AG+  T          L    N+ G   L   LL
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRALMEALL 95

Query: 150 ETMGKTARESSKEGRIVNVSS------------RRHQFSYPEGIRFDRINDQSGYNRFSA 197
             + K           V VSS                 +     R   + + +G   + A
Sbjct: 96  PRLRK-----GHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLA 150

Query: 198 YGQSKLANVLHTSELARR-LKEDGVDITANSVHPGAITTNL 237
           Y  SK A  + T   A   L   GV +  N+V PG + T +
Sbjct: 151 YAGSKEALTVWTRRRAATWLYGAGVRV--NTVAPGPVETPI 189

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 56/216 (25%), Positives = 80/216 (37%), Gaps = 39/216 (18%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
             +G   +V G S GIG    R     G +V       A  ++  + + +E     VQ  
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFT---YAGSKDAAERLAQETGATAVQTD 59

Query: 86  ELDLSSLAS-VRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATN-HIGH 141
             D  ++   VRK           L+IL+ NAGI        L  D+I+  F  N H  +
Sbjct: 60  SADRDAVIDVVRKSG--------ALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPY 111

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
                       + AR+  + GRI+ + S          +  DR+         +AY  S
Sbjct: 112 HASV--------EAARQMPEGGRIIIIGS----------VNGDRMPVAGM----AAYAAS 149

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           K A       LAR     G  IT N V PG I T+ 
Sbjct: 150 KSALQGMARGLARDFGPRG--ITINVVQPGPIDTDA 183

Length = 237

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG + G+G   A  LA +G  + +   N     E            +V+    +++  
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAEC--GALGTEVRGYAANVTDE 66

Query: 93  ASV----RKFASEFKSSGLPLNILINNAGIMATPFML-----------SKDNIELQFATN 137
             V     + A +F      LN LINNAGI+    ++           S +  +     N
Sbjct: 67  EDVEATFAQIAEDFGQ----LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
             G FL      E   K   ES  +G I+N+SS
Sbjct: 123 LTGVFLCGR---EAAAKMI-ESGSKGVIINISS 151

Length = 253

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 41/223 (18%)

Query: 29  GLTAIVTGAS--SGIGTETARVLALRGVHVVMAV-----RNMAACREVKKAIV--KEIPN 79
              A+VTG S   GIG    + LA  G  +         + M    +  + I   +E+  
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 80  --AKVQAMELDLSSLASVRKFASEFKSS-GLPLNILINNAGIMAT-PF-MLSKDNIELQF 134
              KV +MELDL+   + ++  ++     G P +IL+NNA       F  L+ + ++  +
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYP-HILVNNAAYSTNNDFSNLTAEELDKHY 124

Query: 135 ATNHIGHFLLTNLLLETMGKTARESSKE--GRIVNVSSRRHQFSYPEGIRFDRINDQSGY 192
             N     LL++       + AR   K+  GRI+N++S   QF  P              
Sbjct: 125 MVNVRATTLLSS-------QFARGFDKKSGGRIINMTS--GQFQGPMVGE---------- 165

Query: 193 NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
               AY  +K A    TS LA  +   G  IT N+++PG   T
Sbjct: 166 ---LAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDT 203

Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 35/217 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ-----AME 86
           A VTG   GIGT   + L   G  VV      A C       VK + + K       A E
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVV------AGCGPNSPRRVKWLEDQKALGFDFIASE 59

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLL 144
            ++    S +    + K+    +++L+NNAGI        +++++      TN    F +
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNV 119

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  +++ M +        GRI+N+SS               +N Q G    + Y  +K  
Sbjct: 120 TKQVIDGMVERGW-----GRIINISS---------------VNGQKGQFGQTNYSTAKAG 159

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
               T  LA+ +   GV  T N+V PG I T++ + I
Sbjct: 160 IHGFTMSLAQEVATKGV--TVNTVSPGYIGTDMVKAI 194

Length = 246

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 18/156 (11%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVM-----AVRNMAACREVKKAIVKEIPNAKVQ 83
           G   IVTGA  GIG   A   A  G  VV+      +   A+     +A+V EI  A  +
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 84  AM--ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHI 139
           A+    D++              +   L++L+NNAGI+    +  +S++  +   A +  
Sbjct: 66  AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLK 125

Query: 140 GHFLLTNLLLETMGKTARESSKEG-----RIVNVSS 170
           GHF              R  SK G     RI+N SS
Sbjct: 126 GHFATLRHA----AAYWRAESKAGRAVDARIINTSS 157

Length = 286

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           +TGA+SGIG ETA + A  G  V +   +      +   +  E     V A  LD++  A
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAE----NVVAGALDVTDRA 60

Query: 94  SVRKFASEF-KSSGLPLNILINNAGI 118
           +     ++F  ++G  L+ L NNAG+
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGV 86

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 35/216 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
           SG  A+VTG+S GIG   A  LA  G  + +   R+  A  E  + I  E    K  A++
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI--EALGRKALAVK 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNA--GIMATPFMLSKDNIELQFATNHIGHFLL 144
            ++  +  +++  ++       L++ +NNA  G++  P M        +   +H    + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL-RPAM--------ELEESHWDWTMN 111

Query: 145 TN----LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            N    L          E    G+I+++SS          IR+           ++  G 
Sbjct: 112 INAKALLFCAQEAAKLMEKVGGGKIISLSSL-------GSIRY--------LENYTTVGV 156

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           SK A    T  LA  L   G  I  N+V  GA+ T+
Sbjct: 157 SKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTD 190

Length = 250

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 33/219 (15%)

Query: 23  QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV 82
           Q  D +G  AI+TG ++G+G   A  LA  G  +V     +A   E +  +  E    K 
Sbjct: 2   QLFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGV--GVAEAPETQAQV--EALGRKF 57

Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIG 140
             +  DL     +    S+       ++ILINNAGI+    +L     + +     N   
Sbjct: 58  HFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKT 117

Query: 141 HFLLTNLLLETMGKTARESSKE---GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
            F L+          A++  K+   G+I+N++S     S+  GI            R  +
Sbjct: 118 VFFLSQ-------AVAKQFVKQGNGGKIINIAS---MLSFQGGI------------RVPS 155

Query: 198 YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           Y  SK A +  T  LA  L +  +++  N++ PG + T+
Sbjct: 156 YTASKSAVMGLTRALATELSQYNINV--NAIAPGYMATD 192

Length = 251

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 67/281 (23%), Positives = 94/281 (33%), Gaps = 64/281 (22%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAM 85
           SG  A+VTGAS GIG   A  L   G  V +  R             +EI     K   +
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGR---TILPQLPGTAEEIEARGGKCIPV 58

Query: 86  ELDLSSLASVRK-FASEFKSSGLPLNILINNA--------GIMATPFMLSK-------DN 129
             D S    V   F    +     L+IL+NNA          +A PF           +N
Sbjct: 59  RCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118

Query: 130 IEL--QFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN 187
           + L   +A +         L+++           +G IV +SS         G+      
Sbjct: 119 VGLRAHYACSVYA----APLMVKAG---------KGLIVIISS-------TGGLE----- 153

Query: 188 DQSGYNRFS-AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
                  F+ AYG  K A     +++A  LK  G  +   S+ PG + T L         
Sbjct: 154 -----YLFNVAYGVGKAAIDRMAADMAHELKPHG--VAVVSLWPGFVRTELVLE--MPED 204

Query: 247 LVGLLGKYVIKNVEQGAAT----TCYVAL--HPHVKGLTGS 281
             G            G  T     C VAL   P +  L+G 
Sbjct: 205 DEGSWHAKERDAFLNGETTEYSGRCVVALAADPDLMELSGR 245

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 31/208 (14%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           +TGAS G G         RG  VV   R+ A   +    + ++  +  +  + LD++  A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLAD----LAEKYGDR-LLPLALDVTDRA 62

Query: 94  SVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLLLET 151
           +V             L+I++NNAG      +  +++     Q  TN  G   +T  +L  
Sbjct: 63  AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122

Query: 152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSE 211
           +    RE    G I+ +SS               I   S +     Y  SK A +   SE
Sbjct: 123 L----REQRS-GHIIQISS---------------IGGISAFPMSGIYHASKWA-LEGMSE 161

Query: 212 -LARRLKEDGVDITANSVHPGAITTNLF 238
            LA+ + E G+ +T   V PG  +T+  
Sbjct: 162 ALAQEVAEFGIKVTL--VEPGGYSTDWA 187

Length = 275

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 63/217 (29%), Positives = 86/217 (39%), Gaps = 50/217 (23%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA+ GIG   A   A  G  VV+  R+     EV   +       +  A+  
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRA--AGGEALALTA 63

Query: 88  DLSSLA---SVRKFASE-FKSSGLPLNILINNAG--IMATPFM-LSKDNIELQ-----FA 135
           DL + A   +    A E F      +++LINN G  I A PF    ++ IE +     F 
Sbjct: 64  DLETYAGAQAAMAAAVEAFGR----IDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFP 119

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
           T      +L ++L       A+     G IVNVSS                    G NR 
Sbjct: 120 TLWCCRAVLPHML-------AQGG---GAIVNVSS----------------IATRGINRV 153

Query: 196 SAYGQSKLA-NVLHTSELARRLKEDGVDITANSVHPG 231
             Y  +K   N L T+ LA    E G  I  N+V PG
Sbjct: 154 P-YSAAKGGVNAL-TASLAFEYAEHG--IRVNAVAPG 186

Length = 260

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 30/214 (14%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VTGA++G G    R    +G  V+   R     +E+K  +        +   +LD+ + 
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNR 58

Query: 93  ASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
           A++ +  +   +    +++L+NNAG+   +      S ++ E    TN+ G   +T  +L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M +        G I+N+ S    + Y  G               + YG +K A V   
Sbjct: 119 PGMVERNH-----GHIINIGSTAGSWPYAGG---------------NVYGATK-AFVRQF 157

Query: 210 SELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
           S L  R    G  +    + PG +    F N+ F
Sbjct: 158 S-LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF 190

Length = 248

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A V GA  G+G   AR  A  G  V +A R  A    +   I+++   +   A+  D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAK-AVPTDAR 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAG 117
               V       +    PL +L+ NAG
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK 81
             G+ G    AIVTG ++ IG   AR L   G  V +   +      V  ++       +
Sbjct: 1   MIGLAGK--VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GER 53

Query: 82  VQAMELDLSSLASVRKFASEFKSSGLPLNILINNA 116
            + +  D++  A++ +  +   +    ++IL+N A
Sbjct: 54  ARFIATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 57/216 (26%), Positives = 82/216 (37%), Gaps = 33/216 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAV--RNMAACREVKKAIVKEIPNAKVQAM 85
            G  A++TGA SGIG  TA   A  G  + +           EV + I  +    K  A+
Sbjct: 54  QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI--QAEGRKAVAL 111

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAG---IMATPFMLSKDNIELQFATNHIGHF 142
             DL   A  R+           L+IL+N AG    +     ++ +  +  F TN    F
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-PEGIRFDRINDQSGYNRFSAYGQS 201
            L    +  +   A        I+N  S +   SY P     D             Y  +
Sbjct: 172 WLCKAAIPHLPPGA-------SIINTGSIQ---SYQPSPTLLD-------------YAST 208

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           K A V  T  LA+++ E G  I  N+V PG + T L
Sbjct: 209 KAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPL 242

Length = 300

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 32/219 (14%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDLS 90
           +V GA  GIG   AR +   G  V++A  N     E  +A  K +  A   V   E+D+S
Sbjct: 6   VVIGAG-GIGQAIARRVGA-GKKVLLADYNE----ENLEAAAKTLREAGFDVSTQEVDVS 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
           S  SV+  A+  ++ G P+  L++ AG+  +P   S+ + E     +  G    T L+LE
Sbjct: 60  SRESVKALAATAQTLG-PVTGLVHTAGV--SP---SQASPEAILKVDLYG----TALVLE 109

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIR------------FDRINDQSGYNRFSAY 198
             GK          I + S  R      E  R               +   +  +   AY
Sbjct: 110 EFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAY 169

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +K AN L     A +  E G  I  NS+ PG I+T L
Sbjct: 170 QIAKRANALRVMAEAVKWGERGARI--NSISPGIISTPL 206

Length = 275

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--M 85
            G  A++TGAS GIG   A+  A  G  +V    N      V K +        ++A   
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVF---NDINQELVDKGL-AAYRELGIEAHGY 64

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFL 143
             D++    V+   S+ +     ++IL+NNAGI+    ML  S ++       +    F+
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFI 124

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSS 170
           ++  ++ +M K        G+I+N+ S
Sbjct: 125 VSKAVIPSMIK-----KGHGKIINICS 146

Length = 265

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 38/211 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI----PN--AKVQA 84
            A++TG +  IG   AR L   G  V +     AA      A+  E+    P   A +QA
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAA---EADALAAELNALRPGSAAALQA 64

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAG-IMATPF-MLSKDNIELQFATNHIGHF 142
              DL    ++ +  +   ++   L+ L+NNA     TP   +++   +  FA+N    F
Sbjct: 65  ---DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPF 121

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            L+      + K        G IVN++                I+ +     +  Y  +K
Sbjct: 122 FLSQAAAPQLRKQR------GAIVNITD---------------IHAERPLKGYPVYCAAK 160

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAI 233
            A  + T  LA  L     ++  N+V PGAI
Sbjct: 161 AALEMLTRSLALEL---APEVRVNAVAPGAI 188

Length = 249

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELD 88
           L   +TGASSGIG   AR  A +G  + +  R      +  +A    +P  A+V     D
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARR----TDALQAFAARLPKAARVSVYAAD 58

Query: 89  LSSLASVRKFASEF-KSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIG 140
           +    ++   A++F  + GLP +++I NAGI     T              TN+ G
Sbjct: 59  VRDADALAAAAADFIAAHGLP-DVVIANAGISVGTLTEEREDLAVFREVMDTNYFG 113

Length = 257

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
            G   T ++TG   G+G   AR LA RG  H+V+  R   A R   +A +     A+V  
Sbjct: 147 GGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSV 206

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI 118
           +  D++  A++    +E  + G PL  +I+ AG+
Sbjct: 207 VRCDVTDPAALAALLAELAAGG-PLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 41/226 (18%)

Query: 24  GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ 83
           G  G G  A++TG +SGIG  T    A RG  VV+   +    R+    +  E     V 
Sbjct: 3   GFPGRG--AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVH 58

Query: 84  AMELDLSSLASVRKFASE-FKSSGLPLNILINNAGI-MATPF--MLSKD-----NIELQF 134
            +  D+     V   A E F+  G  ++++ +NAGI +  P   M   D     +++L  
Sbjct: 59  GVMCDVRHREEVTHLADEAFRLLG-HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWG 117

Query: 135 ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNR 194
           + + +  FL   L   T G     +S  G + N                           
Sbjct: 118 SIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG------------------------- 152

Query: 195 FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             AYG +K   V     LAR +  DG+ ++   + P  + TNL  N
Sbjct: 153 LGAYGVAKYGVVGLAETLAREVTADGIGVSV--LCPMVVETNLVAN 196

Length = 275

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 47/219 (21%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL--DLS 90
           IVTG +SGIG   +  LA  G   V+  R+     E  + +    P A+   ++L  D  
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVDLTDDAQ 69

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT---------NHIGH 141
              +V +  ++F      ++ L+NNAG+         D + L+            N I +
Sbjct: 70  CRDAVEQTVAKFGR----IDGLVNNAGV--------NDGVGLEAGREAFVASLERNLIHY 117

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           +++ +  L  +  +       G IVN+SS+                  +G    S Y  +
Sbjct: 118 YVMAHYCLPHLKAS------RGAIVNISSK---------------TALTGQGGTSGYAAA 156

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           K A +  T E A  L +DGV +  N+V P  + T L+ N
Sbjct: 157 KGAQLALTREWAVALAKDGVRV--NAVIPAEVMTPLYEN 193

Length = 258

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 35/214 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T +VTG S G+G   AR  A  G  VV+   N     +  +A+  E+ + +  A++ D++
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVV---NYHQSEDAAEALADELGD-RAIALQADVT 62

Query: 91  SLASVRK-FASEFKSSGLPLNILINNAGI--------MATPFMLSKDNIELQFATNHIGH 141
               V+  FA+  +  G P+  ++NNA                ++ ++ + Q   +  G 
Sbjct: 63  DREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGA 122

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
                  L  M          GRI+N+ +   Q            N    Y+ ++    +
Sbjct: 123 LNTIQAALPGM-----REQGFGRIINIGTNLFQ------------NPVVPYHDYTT---A 162

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           K A +  T  LA  L   G  IT N V  G + T
Sbjct: 163 KAALLGLTRNLAAELGPYG--ITVNMVSGGLLRT 194

Length = 253

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 60/209 (28%), Positives = 87/209 (41%), Gaps = 25/209 (11%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
              +G  A+VTGA+ GIG   A  L   G  VV+A  +     +V KA+ +   NA   A
Sbjct: 6   PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGE---NAWFIA 62

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLL 144
           M  D++  A V    +E       L+ L+ NA I A P   + +++ L      +   L 
Sbjct: 63  M--DVADEAQVAAGVAEVLGQFGRLDALVCNAAI-ADPHNTTLESLSLAHWNRVLAVNLT 119

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
             +LL          +  G IVN++S R + S P+                 AY  SK  
Sbjct: 120 GPMLLAKHC-APYLRAHNGAIVNLASTRARQSEPDT---------------EAYAASKGG 163

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAI 233
            +  T  LA  L   G +I  N+V PG I
Sbjct: 164 LLALTHALAISL---GPEIRVNAVSPGWI 189

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 25  IDGSGL----TAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN 79
           + G GL      +VT A+ +GIG+ TAR     G  VV++  +     E    +  E+  
Sbjct: 9   VPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL 68

Query: 80  AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGI 118
            +V+A+  D++S A V             L++L+NNAG+
Sbjct: 69  GRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGL 107

Length = 262

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TA++ GAS G+G      L  RG  V   VR        +   ++ +P   ++   LD++
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ-----QDTALQALPGVHIEK--LDMN 55

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTN 146
             AS+ +     +  G   ++L  NAGI        +   +   A   IG   LTN
Sbjct: 56  DPASLDQLLQRLQ--GQRFDLLFVNAGISGP---AHQSAADATAA--EIGQLFLTN 104

Length = 225

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI---VKEIPNAKVQA 84
           SG T  +TGAS GIG   A   A  G ++V+A +      ++   I    +EI  A  QA
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQA 64

Query: 85  M--ELDLSSLASVR----KFASEFKSSGLPLNILINNAG 117
           +    D+     V     K    F      ++I +NNA 
Sbjct: 65  LPLVGDVRDEDQVAAAVAKAVERFGG----IDICVNNAS 99

Length = 273

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 15/144 (10%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VT +S GIG   AR L  +G  VV++ RN      ++KA+ +     +V A++ DLS  
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNE---ENLEKALKELKEYGEVYAVKADLSDK 60

Query: 93  ASVRKFASEFKSSGLPLNILINNAG-IMATPFMLSKDNIE--LQFATNHI---GHFLLTN 146
             ++    E       ++ L+ NAG +   P ML +      L+ A  H+   G+  LT 
Sbjct: 61  DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGY--LTT 118

Query: 147 LLLETMGKTARESSKEGRIVNVSS 170
           LL++       E   +G +V +SS
Sbjct: 119 LLIQAW----LEKKMKGVLVYLSS 138

Length = 259

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIV 74
          S  T +VTGAS G+G + A+  A  G  V++  R+     +V  AIV
Sbjct: 5  SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV 51

Length = 239

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 34  VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA 93
           V GA+   G    + L  RG  V    RN             + P   V  ++ DL  LA
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRN-----------PSKAPAPGVTPVQKDLFDLA 51

Query: 94  SVRKFASEF 102
            + +  +  
Sbjct: 52  DLAEALAGV 60

Length = 182

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 48/212 (22%), Positives = 80/212 (37%), Gaps = 34/212 (16%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            ++TG++ GIG   A  LA  G  +++              + +E    K  A   +++ 
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTH 69

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLTNLLL 149
              V       +    P+++LINNAGI    PF    +       A N    FL++  + 
Sbjct: 70  KQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVA 129

Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M K      + G+I+N+ S + +                G +  + Y  SK A  + T
Sbjct: 130 RYMVK-----RQAGKIINICSMQSEL---------------GRDTITPYAASKGAVKMLT 169

Query: 210 S----ELARRLKEDGVDITANSVHPGAITTNL 237
                ELAR       +I  N + PG   T +
Sbjct: 170 RGMCVELARH------NIQVNGIAPGYFKTEM 195

Length = 254

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 41/193 (21%), Positives = 63/193 (32%), Gaps = 30/193 (15%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VTG +  IG+     L   G  V    R              +   + V+ + LDL+  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG---------LDPLLSGVEFVVLDLTDR 54

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETM 152
             V + A            +I+ A   + P   +  +       N  G     NLL    
Sbjct: 55  DLVDELAKGVPD------AVIHLAAQSSVP-DSNASDPAEFLDVNVDG---TLNLL---- 100

Query: 153 GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSEL 212
            + AR +  + R V  SS    +  P  +  D   D       + YG SKLA        
Sbjct: 101 -EAARAAGVK-RFVFASSVSVVYGDPPPLPIDE--DLGPPRPLNPYGVSKLAAEQLLRAY 156

Query: 213 ARRLKEDGVDITA 225
           AR     G+ +  
Sbjct: 157 ARL---YGLPVVI 166

Length = 314

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL- 87
           G   ++ G +  +G   AR LA +G   V    N AA +   +  V  +  A  +A+   
Sbjct: 8   GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQ 67

Query: 88  -DLSSLASVRK-FASEFKSSGLPLNILINNAG-IMATPFM-LSKDNIELQFATNHIGHFL 143
            DL++ A+V K F     + G P +I IN  G ++  P + +S+   +  FA N    F 
Sbjct: 68  ADLTTAAAVEKLFDDAKAAFGRP-DIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFF 126

Query: 144 LTNLLLETMGKTARESSKEGRIVN-VSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
                   + +  R  +  G+IV  V+S    F              + +  +SAY  SK
Sbjct: 127 F-------IKEAGRHLNDNGKIVTLVTSLLGAF--------------TPF--YSAYAGSK 163

Query: 203 LANVLH-TSELARRLKEDGVDITANSVHPGAITTNLF 238
            A V H T   ++     G+ +TA  V PG + T  F
Sbjct: 164 -APVEHFTRAASKEFGARGISVTA--VGPGPMDTPFF 197

Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 34/225 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVM--AVRNM-------AACREVKKAIVKEIPN 79
           G  A +TGA+ G G   A  LA  G  ++       +        A RE      + +  
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 80  A--KVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFA 135
              KV A + D+  LA VR    +       L++++ NAG++     + LS++  +    
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLD 122

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
            N  G +     ++  M     E    G I+  SS               +         
Sbjct: 123 INLTGVWRTCKAVVPHM----IERGNGGSIIITSS---------------VAGLKALPGL 163

Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           + Y  +K   V  T  LA  L E G  I  NS+HP ++ T +   
Sbjct: 164 AHYAAAKHGLVGLTKTLANELAEYG--IRVNSIHPYSVDTPMIAP 206

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.5 bits (88), Expect = 0.004
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 31  TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELD 88
           T ++TG   G+G   AR LA RG   +V+  R+          + +     A+V  +  D
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           ++   ++    +   +   PL  +I+ AG++ 
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAGVLD 93

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 25/123 (20%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            IV GA+  IG   A++L+  G  V+ A R+                       ++D++ 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSG-------------------DYQVDITD 41

Query: 92  LASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
            AS++     F+  G   + +++ AG    A    L+  + +    +  +G   L    L
Sbjct: 42  EASIKAL---FEKVG-HFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGL 97

Query: 150 ETM 152
             +
Sbjct: 98  PYL 100

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.98
PRK08267	260	short chain dehydrogenase; Provisional	99.98
PRK06914	280	short chain dehydrogenase; Provisional	99.98
PRK07806	248	short chain dehydrogenase; Provisional	99.98
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07775	274	short chain dehydrogenase; Provisional	99.98
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.95
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.93
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.9
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.82
PLN02583	297	cinnamoyl-CoA reductase	99.82
PRK06720	169	hypothetical protein; Provisional	99.82
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.81
PLN02650	351	dihydroflavonol-4-reductase	99.81
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.81
PLN02214	342	cinnamoyl-CoA reductase	99.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.79
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.79
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.78
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.77
PLN02572	442	UDP-sulfoquinovose synthase	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.75
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.75
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.73
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
PLN02686	367	cinnamoyl-CoA reductase	99.73
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.72
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.7
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.69
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.69
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.68
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.67
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.66
PLN02427	386	UDP-apiose/xylose synthase	99.65
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.63
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.63
PLN02260	668	probable rhamnose biosynthetic enzyme	99.59
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.57
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.56
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.55
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.54
PLN02206	442	UDP-glucuronate decarboxylase	99.52
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.52
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.52
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.5
CHL00194	317	ycf39 Ycf39; Provisional	99.49
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.48
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.45
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.42
PRK07201	657	short chain dehydrogenase; Provisional	99.42
PLN02996	491	fatty acyl-CoA reductase	99.42
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.4
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.36
PRK08309	177	short chain dehydrogenase; Provisional	99.34
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.29
PLN02778	298	3,5-epimerase/4-reductase	99.27
PRK05865	854	hypothetical protein; Provisional	99.27
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.25
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.24
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.21
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.18
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.17
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.17
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.15
PLN02503	605	fatty acyl-CoA reductase 2	99.15
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.11
PLN02260	668	probable rhamnose biosynthetic enzyme	99.1
PLN00016	378	RNA-binding protein; Provisional	99.05
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.02
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.01
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
PRK12320	699	hypothetical protein; Provisional	98.92
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.91
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.8
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.72
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.66
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.65
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.58
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.58
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.47
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.45
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.43
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.43
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.41
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.36
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.33
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.33
KOG2774	366	consensus NAD dependent epimerase [General functio	98.29
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.24
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.23
COG2910	211	Putative NADH-flavin reductase [General function p	98.21
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.13
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.11
PLN00106	323	malate dehydrogenase	98.09
PRK09620	229	hypothetical protein; Provisional	98.08
PRK14982	340	acyl-ACP reductase; Provisional	98.02
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.9
PTZ00325	321	malate dehydrogenase; Provisional	97.87
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.73
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.72
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.66
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.65
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.6
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.57
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.57
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.54
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.53
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.52
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.51
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.51
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.45
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.44
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.42
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.41
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.38
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.37
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.35
PRK06849	389	hypothetical protein; Provisional	97.34
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.34
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.33
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.31
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.3
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.29
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.27
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.27
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.26
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.26
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.24
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.24
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.24
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.22
COG3268	382	Uncharacterized conserved protein [Function unknow	97.19
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.18
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.14
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.12
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.11
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.1
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.09
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.08
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.04
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.02
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.01
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.01
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.99
PRK14968	188	putative methyltransferase; Provisional	96.99
PRK08328	231	hypothetical protein; Provisional	96.98
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.93
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.93
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.93
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.92
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.9
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.9
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.88
PRK08223	287	hypothetical protein; Validated	96.87
PRK05086	312	malate dehydrogenase; Provisional	96.86
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.85
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.84
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.81
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.77
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.77
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.75
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.74
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.73
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.72
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.69
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.68
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.65
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.64
PRK09496	453	trkA potassium transporter peripheral membrane com	96.63
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.6
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.58
PRK04148	134	hypothetical protein; Provisional	96.55
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.54
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.53
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.53
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.53
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.49
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.48
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.47
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.46
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.46
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.45
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.45
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PRK14851	679	hypothetical protein; Provisional	96.43
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.42
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.41
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.35
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.32
PRK07411	390	hypothetical protein; Validated	96.31
PLN00203	519	glutamyl-tRNA reductase	96.31
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.29
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.28
PLN02602	350	lactate dehydrogenase	96.27
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.26
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.24
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.21
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.2
PLN02494	477	adenosylhomocysteinase	96.19
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.18
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.17
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.13
PRK14852	989	hypothetical protein; Provisional	96.12
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.1
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.1
PTZ00117	319	malate dehydrogenase; Provisional	96.1
PRK09496	453	trkA potassium transporter peripheral membrane com	96.07
PRK07877	722	hypothetical protein; Provisional	95.98
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.98
PRK08655	437	prephenate dehydrogenase; Provisional	95.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.94
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.93
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.85
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.81
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.78
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.77
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.76
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.75
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.72
PRK12480	330	D-lactate dehydrogenase; Provisional	95.66
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.65
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.65
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.63
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.6
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.6
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.58
PRK05442	326	malate dehydrogenase; Provisional	95.55
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.51
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.48
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.47
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.47
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.46
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.46
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.42
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.41
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.41
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.4
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.4
PRK13243	333	glyoxylate reductase; Reviewed	95.39
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.38
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.36
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.36
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.35
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.33
PLN02740	381	Alcohol dehydrogenase-like	95.29
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.21
PTZ00354	334	alcohol dehydrogenase; Provisional	95.2
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.17
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.16
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.15
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.14
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.14
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.13
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.07
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.06
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.06
COG4123	248	Predicted O-methyltransferase [General function pr	95.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.99
PRK14967	223	putative methyltransferase; Provisional	94.95
PRK06223	307	malate dehydrogenase; Reviewed	94.91
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	94.9
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.89
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.87
PLN02928	347	oxidoreductase family protein	94.86
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.83
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.83
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.81
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.81
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.81
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.79
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.78
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.76
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.74
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.74
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	94.7
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.69
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.69
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	94.68

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-44  Score=323.19  Aligned_cols=288  Identities=53%  Similarity=0.754  Sum_probs=258.0

Q ss_pred             CcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH
Q 020927           16 STAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASV   95 (319)
Q Consensus        16 ~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   95 (319)
                      ..........++.|++++||||++|||+++|++|+++|++|++.+|+.+..++..+.+....++.++.++++|+++.++|
T Consensus        22 ~~~~~~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV  101 (314)
T KOG1208|consen   22 TTALEVTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSV  101 (314)
T ss_pred             eecceeeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHH
Confidence            34444567788999999999999999999999999999999999999999999999999877788999999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      .++.+++.+.++++|+||||||++.++...+.|+++..|++|++|++.|++.++|.|+..     .++|||++||..+  
T Consensus       102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-----~~~RIV~vsS~~~--  174 (314)
T KOG1208|consen  102 RKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-----APSRIVNVSSILG--  174 (314)
T ss_pred             HHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-----CCCCEEEEcCccc--
Confidence            999999999999999999999999998888999999999999999999999999999875     3489999999888  


Q ss_pred             CCCCCCcCcCCCCCCC--CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC-cccCchhHHHHHHHHh
Q 020927          176 SYPEGIRFDRINDQSG--YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN-LFRNISFFSGLVGLLG  252 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~  252 (319)
                        ...+++++++....  +.....|+.||.++..+++.|++.+.. |  |.++++|||.+.|+ +.+.......+...+.
T Consensus       175 --~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~  249 (314)
T KOG1208|consen  175 --GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVKTTGLSRVNLLLRLLAKKLS  249 (314)
T ss_pred             --cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCcccccceecchHHHHHHHHHHH
Confidence              35567777776665  666678999999999999999999987 7  99999999999999 5552344444666677


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccccChhccCHHHHHHHHHHHHHHHHHh
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYRC  315 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (319)
                      ..+..++++.|++.++++.+|+...++|.|+.++..........|++.++++|+.+++++...
T Consensus       250 ~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~~~~  312 (314)
T KOG1208|consen  250 WPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIAEPSEEALDEELAEKLWKFSEELIDEQ  312 (314)
T ss_pred             HHhccCHHHHhhheehhccCccccCccccccccccccccccccCCHHHHHHHHHHHHHHhhhc
Confidence            777789999999999999999999999999999999999899999999999999999998765

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-41  Score=309.81  Aligned_cols=281  Identities=36%  Similarity=0.517  Sum_probs=231.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++....++.++.++.+|+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999888888777666789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +.++++|+||||||+..... ..+.++++.+|++|+.+++.+++.++|.|++.      .++||++||.++..+   ..+
T Consensus        89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~------~~riv~vsS~~~~~~---~~~  159 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG------RARVTSQSSIAARRG---AIN  159 (313)
T ss_pred             HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC------CCCeEEEechhhcCC---CcC
Confidence            99999999999999876533 56789999999999999999999999999753      579999999887653   356


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCch--------hHHHHHHHHh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNIS--------FFSGLVGLLG  252 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~  252 (319)
                      ++++....++.++..|+.||+++..|++.|++++.  ..|  |+||+++||+++|++.....        +...+...+.
T Consensus       160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  237 (313)
T PRK05854        160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWG--ITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLS  237 (313)
T ss_pred             cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCC--eEEEEEecceeccCccccccccccchhHHHHHHHHHHh
Confidence            77777777788888999999999999999998654  456  99999999999999864321        1112222221


Q ss_pred             --hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCccc---------ccChhccCHHHHHHHHHHHHHHHHHhhh
Q 020927          253 --KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVA---------QASSQAVNTELAQKLWDFSSDLIYRCSQ  317 (319)
Q Consensus       253 --~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (319)
                        ...+.++++.|.+.++++.++...  +|.|+.+++..         .......|++.++++|++++++++...+
T Consensus       238 ~~~~~~~~~~~ga~~~l~~a~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~~~~  311 (313)
T PRK05854        238 ARGFLVGTVESAILPALYAATSPDAE--GGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGVSFP  311 (313)
T ss_pred             hcccccCCHHHHHHHhhheeeCCCCC--CCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCCCCC
Confidence              123579999999999999766654  69988876432         2234457899999999999999874333

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-41  Score=299.95  Aligned_cols=239  Identities=23%  Similarity=0.237  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999988888877776543 4578899999999999999999986


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                       +++++|++|||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||.++..+.|   
T Consensus        82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-----~~g~Ii~isS~~~~~~~~---  152 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-----GFGRIIYSTSVAIKEPIP---  152 (263)
T ss_pred             -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcCccccCCCC---
Confidence             58899999999997543  3457789999999999999999999999999764     368999999998877544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLV  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~  248 (319)
                                  .+..|+++|+|+.+|+++++.|++++|  |+||+|+||+++|++....             .....+.
T Consensus       153 ------------~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T PRK08339        153 ------------NIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA  218 (263)
T ss_pred             ------------cchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh
Confidence                        367899999999999999999999999  9999999999999975432             0111223


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ...+..++.+|+|+|++++||+ ++...+++|+.+..+|
T Consensus       219 ~~~p~~r~~~p~dva~~v~fL~-s~~~~~itG~~~~vdg  256 (263)
T PRK08339        219 KPIPLGRLGEPEEIGYLVAFLA-SDLGSYINGAMIPVDG  256 (263)
T ss_pred             ccCCcccCcCHHHHHHHHHHHh-cchhcCccCceEEECC
Confidence            3356667789999999999999 6888999999887443

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=308.77  Aligned_cols=266  Identities=17%  Similarity=0.184  Sum_probs=214.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH----------HHHHHHHHHHHhhCCCCceEEEEcCCCCHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM----------AACREVKKAIVKEIPNAKVQAMELDLSSLA   93 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~----------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   93 (319)
                      +.+++||++|||||++|||+++|++|++.|++|++++|+.          +.++++.+.+...  +.++.++.+|+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            3558899999999999999999999999999999999973          3455555555443  456888999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcc-ccC------CCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEE
Q 020927           94 SVRKFASEFKSSGLPLNILINNA-GIM------ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIV  166 (319)
Q Consensus        94 ~v~~~~~~i~~~~~~id~lv~na-g~~------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii  166 (319)
                      +++++++++.+.++++|+||||| |+.      .+..+.+.+.|.+.+++|+.+++.+++.++|.|.++     ..|+||
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-----~~g~IV  155 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-----PGGLVV  155 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-----CCcEEE
Confidence            99999999999999999999999 752      123345678899999999999999999999999763     368999


Q ss_pred             EeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----
Q 020927          167 NVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----  241 (319)
Q Consensus       167 ~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----  241 (319)
                      ++||..+....+            +......|++||+|+.+|+++|+.|+++.|  |+||+|+||+++|++....     
T Consensus       156 ~isS~~~~~~~~------------~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~  221 (305)
T PRK08303        156 EITDGTAEYNAT------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMMLDAFGVTE  221 (305)
T ss_pred             EECCccccccCc------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHHHhhccCc
Confidence            999976543111            112356799999999999999999999999  9999999999999985321     


Q ss_pred             hhHHHHHHHHh-hhhcCCHHHHHHHHHHHhcCCC-ccCCCcccccCCcccccChhccCHHHHHHHHHHHHHH
Q 020927          242 SFFSGLVGLLG-KYVIKNVEQGAATTCYVALHPH-VKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDL  311 (319)
Q Consensus       242 ~~~~~~~~~~~-~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  311 (319)
                      ..........+ ..+..+|+|+|+.++||+. +. ..+++|+++.++.........++++.+.++|+++++.
T Consensus       222 ~~~~~~~~~~p~~~~~~~peevA~~v~fL~s-~~~~~~itG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (305)
T PRK08303        222 ENWRDALAKEPHFAISETPRYVGRAVAALAA-DPDVARWNGQSLSSGQLARVYGFTDLDGSRPDAWRYLVEV  292 (305)
T ss_pred             cchhhhhccccccccCCCHHHHHHHHHHHHc-CcchhhcCCcEEEhHHHHHhcCccCCCCCCCcchhhhhhc
Confidence            00111111223 3445689999999999994 54 5689999999999998888888889999999999864

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-40  Score=297.18  Aligned_cols=282  Identities=41%  Similarity=0.595  Sum_probs=228.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+.+....++.++.++.+|+++.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888877777766555667899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .+.++++|+||||||+..+....+.++++..+++|+.+++.+++.++|.|++.     ..++||++||.++...  +..+
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~~~--~~~~  162 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHRIR--AAIH  162 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHhcc--CCCC
Confidence            99999999999999987665556778999999999999999999999999764     3579999999876542  1234


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-HHHHHHHhhhhcCCHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-SGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~  261 (319)
                      +++....+++.+...|+.||++++.|++.+++++++.|.+|.+++++||+++|++.++.+.. ..+...+......++++
T Consensus       163 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (306)
T PRK06197        163 FDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEM  242 (306)
T ss_pred             ccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHH
Confidence            55555555666778999999999999999999999888555666668999999998765322 22222233334578999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCccc---------ccChhccCHHHHHHHHHHHHHHHH
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSNVA---------QASSQAVNTELAQKLWDFSSDLIY  313 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~  313 (319)
                      .+..+++++.++  ...+|.|+.++|..         ..+....|++.++++|++++++++
T Consensus       243 g~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  301 (306)
T PRK06197        243 GALPTLRAATDP--AVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTG  301 (306)
T ss_pred             HHHHHHHHhcCC--CcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHC
Confidence            999999988533  34589998866543         233456789999999999999886

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=9.8e-41  Score=282.21  Aligned_cols=227  Identities=28%  Similarity=0.335  Sum_probs=198.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+++|+++|||||||||.++|+.|++.|++|++++|+.+.++++.+++.+    ..+..+..|++|.++++++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999998888743    57899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||.+..  ..+.+.++|+.++++|+.|.++.+++++|.|.++     +.|.||++||+++..++|+    
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-----~~G~IiN~~SiAG~~~y~~----  149 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-----KSGHIINLGSIAGRYPYPG----  149 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-----CCceEEEeccccccccCCC----
Confidence            9999999999998654  3467889999999999999999999999999885     5889999999999998665    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH---HHHHHHHhhhhcCCHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF---SGLVGLLGKYVIKNVE  260 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~  260 (319)
                                 .+.|+++|+++..|...|+.++..++  |||..|+||.+.|..+....+.   +...+........+|+
T Consensus       150 -----------~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~  216 (246)
T COG4221         150 -----------GAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPE  216 (246)
T ss_pred             -----------CccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHH
Confidence                       68999999999999999999999888  9999999999988776666433   2333333445567999


Q ss_pred             HHHHHHHHHhcCCCccCC
Q 020927          261 QGAATTCYVALHPHVKGL  278 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~  278 (319)
                      ++|+++.|.+..|..--+
T Consensus       217 dIA~~V~~~~~~P~~vnI  234 (246)
T COG4221         217 DIAEAVLFAATQPQHVNI  234 (246)
T ss_pred             HHHHHHHHHHhCCCcccc
Confidence            999999999976654433

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=5.7e-40  Score=299.44  Aligned_cols=286  Identities=43%  Similarity=0.598  Sum_probs=228.3

Q ss_pred             CCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           12 FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      |..+.....+....++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+.      ++.++.+|+++
T Consensus         9 ~~~~~~~~~~~~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d   82 (315)
T PRK06196          9 FGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLAD   82 (315)
T ss_pred             CCccccHHHHhcCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCC
Confidence            434444444445567899999999999999999999999999999999999887776665542      37889999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      .++++++++++.+.++++|+||||||+.......+.++|+..+++|+.+++.+++.++|.|.+.     ..++||++||.
T Consensus        83 ~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~  157 (315)
T PRK06196         83 LESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-----AGARVVALSSA  157 (315)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCeEEEECCH
Confidence            9999999999999899999999999987655556778899999999999999999999999764     25799999998


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH----H
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG----L  247 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~----~  247 (319)
                      .+...   ...+++.....++.++..|+.||++++.+++.++.++.+.|  |+|++|+||++.|++.+.......    +
T Consensus       158 ~~~~~---~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~  232 (315)
T PRK06196        158 GHRRS---PIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHLPREEQVALGW  232 (315)
T ss_pred             HhccC---CCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccCChhhhhhhhh
Confidence            65432   23344444445666778899999999999999999999988  999999999999998765422111    1


Q ss_pred             HHH--Hhh-hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccc----------cChhccCHHHHHHHHHHHHHHHH
Q 020927          248 VGL--LGK-YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQ----------ASSQAVNTELAQKLWDFSSDLIY  313 (319)
Q Consensus       248 ~~~--~~~-~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~----------~~~~~~~~~~~~~~~~~~~~~~~  313 (319)
                      ...  .+. .++.+|+++|.+++|++.++.....+|.|+.+++...          .++...|.+.++++|+.++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~  311 (315)
T PRK06196        233 VDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTG  311 (315)
T ss_pred             hhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            110  111 1457899999999999977776677888887765543          24456799999999999999875

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.9e-41  Score=298.47  Aligned_cols=238  Identities=18%  Similarity=0.206  Sum_probs=195.2

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      |.++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++..+.+. . .++++|++++++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  89999999999999999999999853 23334444443322 3 67899999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .++++++|+||||||+..      +..+.+.++|++++++|+.+++.+++.++|.|.+       .|+||++||.++..+
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~~  150 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVKY  150 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCccC
Confidence            999999999999999753      2335678899999999999999999999999964       479999999888765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH---HH-HHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS---GL-VGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~  252 (319)
                      .|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......+.   .+ ....+
T Consensus       151 ~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  213 (274)
T PRK08415        151 VP---------------HYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAASGIGDFRMILKWNEINAP  213 (274)
T ss_pred             CC---------------cchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHhccchhhHHhhhhhhhCc
Confidence            44               367899999999999999999999999  99999999999998754332111   11 12345


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ..++.+|+|+|+.++||+ ++.+.+++|+.+. ++|...
T Consensus       214 l~r~~~pedva~~v~fL~-s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        214 LKKNVSIEEVGNSGMYLL-SDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hhccCCHHHHHHHHHHHh-hhhhhcccccEEEEcCcccc
Confidence            566789999999999999 6888999999888 556543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.8e-41  Score=274.12  Aligned_cols=237  Identities=25%  Similarity=0.281  Sum_probs=208.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++.|.++||||++|||++++..|++.|++|++.+++...++++...+..   ...-..+.||+++.++++.++++..+.+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999998888888776632   1366788999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      |.+++||||||+-..  ......++|++.+.+|+.|.|..+|++...|....   +++.+||+|||+.+...        
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGkiG--------  157 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKIG--------  157 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhcccc--------
Confidence            999999999999655  23466789999999999999999999999855431   23559999999999874        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~v  262 (319)
                             .-++..|+++|..+.+|+++.|+|+++++  ||||.|+|||+.|||+...+  ....+...+|.+++..+||+
T Consensus       158 -------N~GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~Eev  228 (256)
T KOG1200|consen  158 -------NFGQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEV  228 (256)
T ss_pred             -------cccchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHH
Confidence                   33588999999999999999999999999  99999999999999998773  45667788899999999999


Q ss_pred             HHHHHHHhcCCCccCCCcccccCCc
Q 020927          263 AATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      |+.++||+ |+.++++||+.+...|
T Consensus       229 A~~V~fLA-S~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  229 ANLVLFLA-SDASSYITGTTLEVTG  252 (256)
T ss_pred             HHHHHHHh-ccccccccceeEEEec
Confidence            99999999 8999999999887443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=293.76  Aligned_cols=233  Identities=18%  Similarity=0.177  Sum_probs=195.2

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++||++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++.    +.++.++++|++++++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence            34789999999999  8999999999999999999999984 3343333332    236888999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .++++++|+||||||+..      +..+.+.++|+..+++|+.+++.+++.++|+|.+       .|+||+++|.++..+
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~  150 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSERA  150 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCcccc
Confidence            999999999999999753      2335677899999999999999999999999853       579999999888765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~  252 (319)
                      .|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++.....    .........+
T Consensus       151 ~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p  213 (252)
T PRK06079        151 IP---------------NYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV  213 (252)
T ss_pred             CC---------------cchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccccccccCCChHHHHHHHHhcCc
Confidence            44               367899999999999999999999999  99999999999999864331    1222333445


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..++.+|+|+|++++||+ ++.+.+++|+.+..+|
T Consensus       214 ~~r~~~pedva~~~~~l~-s~~~~~itG~~i~vdg  247 (252)
T PRK06079        214 DGVGVTIEEVGNTAAFLL-SDLSTGVTGDIIYVDK  247 (252)
T ss_pred             ccCCCCHHHHHHHHHHHh-CcccccccccEEEeCC
Confidence            567789999999999999 6889999999888443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-40  Score=295.31  Aligned_cols=237  Identities=16%  Similarity=0.179  Sum_probs=194.5

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..|+||++|||||++  |||+++|++|+++|++|++++|+....+. .+++..+. + ...++++|++++++++++++++
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHH
Confidence            347899999999996  99999999999999999999998644333 33343332 2 2357899999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .++++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||+++|.++..+
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~~  152 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTRV  152 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCcccc
Confidence            999999999999999853      2235678999999999999999999999999963       479999999988765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~  252 (319)
                      .|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......    ........+
T Consensus       153 ~~---------------~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p  215 (271)
T PRK06505        153 MP---------------NYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSP  215 (271)
T ss_pred             CC---------------ccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccccCcchHHHHHHHhhcCC
Confidence            44               367899999999999999999999999  999999999999998643311    111222345


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|+|+|+.++||+ ++.+.++||+.+. |+|..
T Consensus       216 ~~r~~~peeva~~~~fL~-s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        216 LRRTVTIDEVGGSALYLL-SDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             ccccCCHHHHHHHHHHHh-CccccccCceEEeecCCcc
Confidence            556779999999999999 6888999999888 55543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-40  Score=292.82  Aligned_cols=240  Identities=15%  Similarity=0.182  Sum_probs=197.0

Q ss_pred             ccccCCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHH
Q 020927           20 EVTQGIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      +|.+.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++..+.  ..+.++.+|+++++++++
T Consensus         1 ~~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~v~~   77 (258)
T PRK07533          1 PMQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL--DAPIFLPLDVREPGQLEA   77 (258)
T ss_pred             CCCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh--ccceEEecCcCCHHHHHH
Confidence            3566788999999999999  59999999999999999999999864322 233333332  235678999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           98 FASEFKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +++++.++++++|+||||||+...      ..+.+.++|++++++|+.+++.+++.++|.|++       .++||++||.
T Consensus        78 ~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~  150 (258)
T PRK07533         78 VFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYY  150 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEecc
Confidence            999999999999999999997532      235677899999999999999999999999953       5799999998


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGL  247 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~  247 (319)
                      .+..+.|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......    ...+
T Consensus       151 ~~~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~~~~~~~~~~~~  213 (258)
T PRK07533        151 GAEKVVE---------------NYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASGIDDFDALLEDA  213 (258)
T ss_pred             ccccCCc---------------cchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhccCCcHHHHHHH
Confidence            8776433               367899999999999999999999999  999999999999998654321    1223


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ....+..++.+|+|+|+.++||+ ++.+.+++|+.+..+|
T Consensus       214 ~~~~p~~r~~~p~dva~~~~~L~-s~~~~~itG~~i~vdg  252 (258)
T PRK07533        214 AERAPLRRLVDIDDVGAVAAFLA-SDAARRLTGNTLYIDG  252 (258)
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHh-ChhhccccCcEEeeCC
Confidence            33345556789999999999999 6888999999888443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-40  Score=290.35  Aligned_cols=237  Identities=22%  Similarity=0.247  Sum_probs=198.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||++|||||++|||++++++|+++|++|++++|+..  +...+.+...  +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998653  2333334332  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++++++|+.+++.+++.++|+|.++    +..|+||++||..+..+.+    
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~----  151 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ----GNGGKIINIASMLSFQGGI----  151 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc----CCCCEEEEeCChhhcCCCC----
Confidence            99999999999998644  3356778999999999999999999999999763    1258999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~  258 (319)
                                 ....|++||+++++|+++++.+++++|  |+||+|+||+++|++.....    ........++..++.+
T Consensus       152 -----------~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~  218 (251)
T PRK12481        152 -----------RVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGT  218 (251)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcC
Confidence                       357899999999999999999999999  99999999999999865431    1122333456667789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      |+|+|++++||+ ++.+.+++|+.+..+|
T Consensus       219 peeva~~~~~L~-s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        219 PDDLAGPAIFLS-SSASDYVTGYTLAVDG  246 (251)
T ss_pred             HHHHHHHHHHHh-CccccCcCCceEEECC
Confidence            999999999999 6888999999888443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.6e-40  Score=286.55  Aligned_cols=223  Identities=27%  Similarity=0.354  Sum_probs=199.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..++++++||||||+|||+++|++|+++|++|++++|++++++++.++++... +..+.++.+|+++++++..+.+++..
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHh
Confidence            35679999999999999999999999999999999999999999999999876 77899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ....||+||||||+...  +.+.+.++.++++++|+++...|+++++|.|.++     +.|.||+|+|.++..+.|.   
T Consensus        81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-----~~G~IiNI~S~ag~~p~p~---  152 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-----GAGHIINIGSAAGLIPTPY---  152 (265)
T ss_pred             cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechhhcCCCcc---
Confidence            98899999999998654  4578889999999999999999999999999885     5899999999999998775   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                  .+.|++||+++.+|+++|+.|+.+.|  |+|.+|+||++.|++.. .. ........+...+.+|+++
T Consensus       153 ------------~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~-~~-~~~~~~~~~~~~~~~~~~v  216 (265)
T COG0300         153 ------------MAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFD-AK-GSDVYLLSPGELVLSPEDV  216 (265)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCcccccccc-cc-ccccccccchhhccCHHHH
Confidence                        78999999999999999999999999  99999999999999986 21 1112222235556899999


Q ss_pred             HHHHHHHhcC
Q 020927          263 AATTCYVALH  272 (319)
Q Consensus       263 a~~i~~l~~s  272 (319)
                      |+..+..+..
T Consensus       217 a~~~~~~l~~  226 (265)
T COG0300         217 AEAALKALEK  226 (265)
T ss_pred             HHHHHHHHhc
Confidence            9999999953

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-40  Score=290.00  Aligned_cols=241  Identities=27%  Similarity=0.286  Sum_probs=204.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888887777654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-CCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-PEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-p~~  180 (319)
                      +.++++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.++|.|.++    +..++||++||..+.... |. 
T Consensus        82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~-  156 (253)
T PRK05867         82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ----GQGGVIINTASMSGHIINVPQ-  156 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc----CCCcEEEEECcHHhcCCCCCC-
Confidence            999999999999998643  3356778999999999999999999999999764    135789999998876421 21 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-HHHHHHHHhhhhcCCH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~  259 (319)
                                   .+..|++||+++++|+++++.+++++|  |+||+|+||+++|++...... ...+....+..++.+|
T Consensus       157 -------------~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p  221 (253)
T PRK05867        157 -------------QVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRP  221 (253)
T ss_pred             -------------CccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCH
Confidence                         246899999999999999999999999  999999999999998765422 2233334456677899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|++++||+ ++...++||+.+. |+|
T Consensus       222 ~~va~~~~~L~-s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        222 EELAGLYLYLA-SEASSYMTGSDIVIDGG  249 (253)
T ss_pred             HHHHHHHHHHc-CcccCCcCCCeEEECCC
Confidence            99999999999 6889999999888 444

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.1e-40  Score=292.13  Aligned_cols=236  Identities=16%  Similarity=0.141  Sum_probs=194.9

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMA--ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+.+  ..++..+++...  ..++.++.+|++++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence            56889999999986  89999999999999999998876543  234445555443  2357788999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          101 EFKSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ++.++++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||++||..+.
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~  152 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGV  152 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEeccccc
Confidence            99999999999999999753      2335678899999999999999999999999964       4799999998887


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHH
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGL  250 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~  250 (319)
                      .+.|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++....    .........
T Consensus       153 ~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK07370        153 RAIP---------------NYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASSAVGGILDMIHHVEEK  215 (258)
T ss_pred             cCCc---------------ccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhhccccchhhhhhhhhc
Confidence            6544               367899999999999999999999999  9999999999999975432    111222233


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+..++.+|+|++++++||+ ++...+++|+.+..+|
T Consensus       216 ~p~~r~~~~~dva~~~~fl~-s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        216 APLRRTVTQTEVGNTAAFLL-SDLASGITGQTIYVDA  251 (258)
T ss_pred             CCcCcCCCHHHHHHHHHHHh-ChhhccccCcEEEECC
Confidence            45566789999999999999 6889999999777443

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7e-40  Score=292.83  Aligned_cols=254  Identities=28%  Similarity=0.310  Sum_probs=211.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999 7777777777543  457899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|+||||||+...   ..+.+.+.|++.+++|+.+++.+++.++|+|++.      .++||++||..+..+.|.   
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~---  150 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQAADLY---  150 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcCCCCC---
Confidence            9999999999998642   2356678899999999999999999999999763      589999999988875443   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--H----HHHH----HHHh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--F----SGLV----GLLG  252 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~----~~~~----~~~~  252 (319)
                                  ...|++||+|++.|+++++.+++++|  |+||+|+||+++|++......  .    ..+.    ...+
T Consensus       151 ------------~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (272)
T PRK08589        151 ------------RSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP  216 (272)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC
Confidence                        57899999999999999999999999  999999999999998654310  0    0111    1124


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChhccCHHHHHHHHHHH
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQAVNTELAQKLWDFS  308 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~~  308 (319)
                      ..++.+|+|+|+.++|++ ++...+++|+.+. ++|....  .+.++.+.+..|+++
T Consensus       217 ~~~~~~~~~va~~~~~l~-s~~~~~~~G~~i~vdgg~~~~--~~~~~~~~~~~~~~~  270 (272)
T PRK08589        217 LGRLGKPEEVAKLVVFLA-SDDSSFITGETIRIDGGVMAY--TWPGEMLSDDSWKRT  270 (272)
T ss_pred             CCCCcCHHHHHHHHHHHc-CchhcCcCCCEEEECCCcccC--CCCCcccccchhhhh
Confidence            455678999999999999 6778899999888 5554322  345777888888876

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.3e-40  Score=290.47  Aligned_cols=236  Identities=18%  Similarity=0.192  Sum_probs=194.6

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++||++|||||++  |||+++|++|+++|++|++++|+. ..++..+++..+. + ...++++|++++++++++++++.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHHH
Confidence            46899999999997  999999999999999999999884 3444455554443 2 23467899999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          104 SSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      ++++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||+++|..+..+.
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~~  154 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEKVI  154 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCccccCC
Confidence            99999999999999753      2335677899999999999999999999999953       5899999998887654


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (319)
                      |               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++.....    .........+.
T Consensus       155 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  217 (260)
T PRK06603        155 P---------------NYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL  217 (260)
T ss_pred             C---------------cccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc
Confidence            4               367899999999999999999999999  99999999999999754321    11222333455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .++.+|+|+|++++||+ ++...+++|+.+. |+|..
T Consensus       218 ~r~~~pedva~~~~~L~-s~~~~~itG~~i~vdgG~~  253 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLF-SELSKGVTGEIHYVDCGYN  253 (260)
T ss_pred             CCCCCHHHHHHHHHHHh-CcccccCcceEEEeCCccc
Confidence            66789999999999999 6888999999887 55543

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=289.63  Aligned_cols=241  Identities=26%  Similarity=0.307  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....+.++.++.+|+++++++.++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888888876543466789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++|.|.++     ..++||++||..+..+.|    
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  153 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-----GRGSIVNIASTHAFKIIP----  153 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-----CCeEEEEECChhhccCCC----
Confidence            99999999999997533  3356678999999999999999999999999764     368999999998877544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----h---hHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----S---FFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~---~~~~~~~~~~~~  254 (319)
                                 ++..|++||+++++|+++++.++++.|  |+||+|+||+++|++....     .   .........+..
T Consensus       154 -----------~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (260)
T PRK07063        154 -----------GCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK  220 (260)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCC
Confidence                       367899999999999999999999999  9999999999999986432     0   111222334566


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|++++||+ ++...+++|+.+. |+|.
T Consensus       221 r~~~~~~va~~~~fl~-s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        221 RIGRPEEVAMTAVFLA-SDEAPFINATCITIDGGR  254 (260)
T ss_pred             CCCCHHHHHHHHHHHc-CccccccCCcEEEECCCe
Confidence            7789999999999999 6888899999888 4443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-40  Score=289.98  Aligned_cols=238  Identities=16%  Similarity=0.165  Sum_probs=194.0

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +++++||++|||||+  +|||+++|++|+++|++|++++|+... ++..+++..+..+.++.++++|+++++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            356889999999998  899999999999999999999875321 12222333332245788999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          102 FKSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +.++++++|+||||||+..      +..+.+.++|.+.+++|+.+++.+++.++|+|.+       .|+||++||..+..
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~  153 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGER  153 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCcc
Confidence            9999999999999999753      1235677889999999999999999999999953       57999999998877


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLL  251 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~  251 (319)
                      +.|.               +..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++.....    .........
T Consensus       154 ~~~~---------------~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK08594        154 VVQN---------------YNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAKGVGGFNSILKEIEERA  216 (257)
T ss_pred             CCCC---------------CchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHhhhccccHHHHHHhhcC
Confidence            5443               67899999999999999999999999  99999999999998754221    111222233


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +..++.+|+|+|++++|++ ++.+.+++|+.+. ++|
T Consensus       217 p~~r~~~p~~va~~~~~l~-s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        217 PLRRTTTQEEVGDTAAFLF-SDLSRGVTGENIHVDSG  252 (257)
T ss_pred             CccccCCHHHHHHHHHHHc-CcccccccceEEEECCc
Confidence            4556789999999999999 7889999999877 444

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-39  Score=288.66  Aligned_cols=234  Identities=15%  Similarity=0.152  Sum_probs=193.0

Q ss_pred             CCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++||++|||||  ++|||+++|++|+++|++|++++|+. ..++..+++..+.  .....+++|++++++++++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence            78999999997  67999999999999999999998864 3344444554432  2356789999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC-------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMATP-------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++++|+||||||+....       .+.+.+.|+..+++|+.+++.+++.++|.|+++      .++||++||.++..+.
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~------~g~Iv~iss~~~~~~~  154 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR------NSAIVALSYLGAVRAI  154 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc------CcEEEEEcccccccCC
Confidence            999999999999986431       234567899999999999999999999998652      5799999999887654


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (319)
                      |               ++..|++||+|+.+|++.++.+++++|  |+||+|+||+++|++.....    ....+....+.
T Consensus       155 ~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  217 (261)
T PRK08690        155 P---------------NYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL  217 (261)
T ss_pred             C---------------CcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC
Confidence            4               368899999999999999999999999  99999999999999865431    11222333456


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .++.+|+|+|+.++|++ ++...+++|+.+..+|
T Consensus       218 ~r~~~peevA~~v~~l~-s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        218 RRNVTIEEVGNTAAFLL-SDLSSGITGEITYVDG  250 (261)
T ss_pred             CCCCCHHHHHHHHHHHh-CcccCCcceeEEEEcC
Confidence            67789999999999999 6888999999888444

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-39  Score=284.93  Aligned_cols=238  Identities=25%  Similarity=0.283  Sum_probs=202.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+++++++..+.+...  +.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999999888887777654  45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-CCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-SYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~~p~~  180 (319)
                      +++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|++.     ..++||++||..+.. +.|  
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-----~~~~iv~~sS~~~~~~~~~--  152 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-----GGGSLIFTSTFVGHTAGFP--  152 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEechHhhccCCC--
Confidence            99999999999998532   3356778999999999999999999999999764     367999999988763 322  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH---HH-HHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS---GL-VGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~  256 (319)
                                   ++..|++||++++.++++++.++.++|  |+||+|+||+++|++.+......   .+ ....+..++
T Consensus       153 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (254)
T PRK07478        153 -------------GMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRM  217 (254)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCC
Confidence                         468999999999999999999999999  99999999999999876442111   11 122244556


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|+|+|+.++|++ ++...+++|+.+..+|
T Consensus       218 ~~~~~va~~~~~l~-s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        218 AQPEEIAQAALFLA-SDAASFVTGTALLVDG  247 (254)
T ss_pred             cCHHHHHHHHHHHc-CchhcCCCCCeEEeCC
Confidence            79999999999999 6778899999887443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-39  Score=286.03  Aligned_cols=233  Identities=13%  Similarity=0.198  Sum_probs=191.8

Q ss_pred             CCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++||++|||||++  |||+++|++|+++|++|++++|+ +..++..+++....  ..+.++.+|++++++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  99999999999999999999998 34445555665442  3467889999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMAT-------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~-------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      .++++|+||||||+...       ..+.+.++|+..+++|+.+++.+.+.+.|.+.+       +|+||++||.++..+.
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~~~  153 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERAI  153 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCCCC
Confidence            99999999999997532       123567889999999999999999999987642       5799999998877654


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~  253 (319)
                      |               .+..|++||+|+++|+++++.|++++|  |+||+|+||+++|++.......    .......+.
T Consensus       154 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  216 (262)
T PRK07984        154 P---------------NYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI  216 (262)
T ss_pred             C---------------CcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC
Confidence            4               367899999999999999999999999  9999999999999875433211    112223455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .++..|+|++++++||+ ++...+++|+.+..+|
T Consensus       217 ~r~~~pedva~~~~~L~-s~~~~~itG~~i~vdg  249 (262)
T PRK07984        217 RRTVTIEDVGNSAAFLC-SDLSAGISGEVVHVDG  249 (262)
T ss_pred             cCCCCHHHHHHHHHHHc-CcccccccCcEEEECC
Confidence            66789999999999999 6888999999888443

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2.7e-39  Score=291.39  Aligned_cols=242  Identities=17%  Similarity=0.174  Sum_probs=195.8

Q ss_pred             cCCCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-------CCCC----ceEEEEcCC
Q 020927           23 QGIDGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-------IPNA----KVQAMELDL   89 (319)
Q Consensus        23 ~~~~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~-------~~~~----~v~~~~~Dl   89 (319)
                      ..++++||++|||||  ++|||+++|+.|+++|++|++ +|+.+.++.+...+...       .+..    ....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            456799999999999  899999999999999999998 78888888777666531       0111    146788998


Q ss_pred             --CC------------------HHHHHHHHHHHHhcCCCccEEEEccccC----CCCcccCcccccchhhhhhhHHHHHH
Q 020927           90 --SS------------------LASVRKFASEFKSSGLPLNILINNAGIM----ATPFMLSKDNIELQFATNHIGHFLLT  145 (319)
Q Consensus        90 --~~------------------~~~v~~~~~~i~~~~~~id~lv~nag~~----~~~~~~~~~~~~~~~~vn~~~~~~l~  145 (319)
                        ++                  +++++++++++.+++|++|+||||||+.    .+..+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  3489999999999999999999999753    23446778999999999999999999


Q ss_pred             HHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEE
Q 020927          146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDIT  224 (319)
Q Consensus       146 ~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~  224 (319)
                      +.++|.|.+       .|+||++||..+..+.|.              .+..|++||+|+.+|+++|+.|+++ +|  |+
T Consensus       162 ~~~~p~m~~-------~G~II~isS~a~~~~~p~--------------~~~~Y~asKaAl~~l~~~la~El~~~~g--Ir  218 (303)
T PLN02730        162 QHFGPIMNP-------GGASISLTYIASERIIPG--------------YGGGMSSAKAALESDTRVLAFEAGRKYK--IR  218 (303)
T ss_pred             HHHHHHHhc-------CCEEEEEechhhcCCCCC--------------CchhhHHHHHHHHHHHHHHHHHhCcCCC--eE
Confidence            999999964       489999999988875543              1247999999999999999999986 78  99


Q ss_pred             EEEeeCCcccCCcccCchhHHH----HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          225 ANSVHPGAITTNLFRNISFFSG----LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       225 v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      ||+|+||+++|++.........    .....+..++..|+|++..++||+ ++.+.+++|+.+..+|..
T Consensus       219 Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLa-S~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        219 VNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLA-SPLASAITGATIYVDNGL  286 (303)
T ss_pred             EEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCCEEEECCCc
Confidence            9999999999998764321111    112234456679999999999999 788899999988744443

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=283.54  Aligned_cols=241  Identities=22%  Similarity=0.230  Sum_probs=205.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...+++.++.++.+|+++++++.++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888888888777666789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.+.|.+.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.|.  
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~--  155 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-----AAASIVCVNSLLALQPEPH--  155 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCcEEEEeccccccCCCCC--
Confidence            999999999999997543  3356678899999999999999999999999864     3689999999998875443  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-------hHHHHH-----
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-------FFSGLV-----  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-------~~~~~~-----  248 (319)
                                   +..|+++|+++.+|+++++.+++++|  |+||+|+||+++|++.... .       .+..+.     
T Consensus       156 -------------~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
T PRK07062        156 -------------MVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALAR  220 (265)
T ss_pred             -------------chHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhh
Confidence                         67899999999999999999999999  9999999999999975431 0       011111     


Q ss_pred             -HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          249 -GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       249 -~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                       ...+..++.+|+++|++++||+ ++...+++|+.+..+|
T Consensus       221 ~~~~p~~r~~~p~~va~~~~~L~-s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        221 KKGIPLGRLGRPDEAARALFFLA-SPLSSYTTGSHIDVSG  259 (265)
T ss_pred             cCCCCcCCCCCHHHHHHHHHHHh-CchhcccccceEEEcC
Confidence             1234556779999999999998 6888999999888443

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-39  Score=286.88  Aligned_cols=237  Identities=17%  Similarity=0.174  Sum_probs=193.2

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      -.|+||++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.++. + ...++++|++++++++++++++
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHH
Confidence            44689999999997  89999999999999999999988743 233344443332 2 3567899999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .++++++|+||||||+...      ..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||+++|.++..+
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~  155 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEKV  155 (272)
T ss_pred             HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEeccccccC
Confidence            9999999999999998532      235677899999999999999999999999853       589999999887765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH---HHH-HHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS---GLV-GLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~---~~~-~~~~  252 (319)
                      .|               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......+.   ... ...+
T Consensus       156 ~p---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  218 (272)
T PRK08159        156 MP---------------HYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP  218 (272)
T ss_pred             CC---------------cchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCc
Confidence            44               367899999999999999999999999  99999999999998754332111   111 1245


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|+|+|+.++||+ ++...++||+.+. ++|..
T Consensus       219 ~~r~~~peevA~~~~~L~-s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        219 LRRTVTIEEVGDSALYLL-SDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             ccccCCHHHHHHHHHHHh-CccccCccceEEEECCCce
Confidence            556779999999999999 6888999999888 55543

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=281.60  Aligned_cols=243  Identities=22%  Similarity=0.212  Sum_probs=203.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+.+...  +.++.++.+|+++++++.+++++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999998754 456666666544  45788999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||.++..+.|.
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~  154 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-----GGGSIVNIASMSGIIVNRG  154 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCCCC
Confidence            99999999999999998643  3356778999999999999999999999999764     3689999999988764432


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHHHHHHhhhhc
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYVI  256 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~  256 (319)
                                   ..+..|+++|+|+++++++++.++.++|  |+||+|+||+++|++......   ...+....+..++
T Consensus       155 -------------~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~  219 (254)
T PRK06114        155 -------------LLQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRM  219 (254)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCcccccccchHHHHHHHhcCCCCCC
Confidence                         1257899999999999999999999999  999999999999998653211   1223334556677


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+|+|++++++||+ ++.+.+++|+.+. ++|.
T Consensus       220 ~~~~dva~~~~~l~-s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        220 AKVDEMVGPAVFLL-SDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             cCHHHHHHHHHHHc-CccccCcCCceEEECcCE
Confidence            89999999999999 6888999999887 5443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=282.50  Aligned_cols=240  Identities=18%  Similarity=0.218  Sum_probs=199.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+++||++|||||++|||+++|++|+++|++|++++| +.+.++...+.+.... +.++.++.+|++++++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            35688999999999999999999999999999998865 6666777666665432 457899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          103 KSSGLPLNILINNAGIMA--------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~--------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .++++++|+||||||+..        +..+.+.+++...+++|+.+++.+++.++|.|.+.     ..++||++||..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~  156 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-----GGGSIISLSSTGNL  156 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-----CCEEEEEEeccccc
Confidence            999999999999998742        12345678899999999999999999999999764     36799999998877


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHH
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGL  250 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~  250 (319)
                      .+.|               .+..|++||++++.|+++|+.+++++|  |+||+|+||+++|++......    ...+...
T Consensus       157 ~~~~---------------~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK08416        157 VYIE---------------NYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKAFTNYEEVKAKTEEL  219 (260)
T ss_pred             cCCC---------------CcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhhccCCHHHHHHHHhc
Confidence            6544               367899999999999999999999999  999999999999998654321    1122233


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+..++.+|+|+|++++|++ ++...+++|+.+..+|
T Consensus       220 ~~~~r~~~p~~va~~~~~l~-~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        220 SPLNRMGQPEDLAGACLFLC-SEKASWLTGQTIVVDG  255 (260)
T ss_pred             CCCCCCCCHHHHHHHHHHHc-ChhhhcccCcEEEEcC
Confidence            45556789999999999999 6788899999887443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=9.3e-38  Score=284.62  Aligned_cols=278  Identities=35%  Similarity=0.529  Sum_probs=217.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|++|||||++|||++++++|+++| ++|++++|+.+..++..+++..  ++.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM--PKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC--CCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999 8999999999888777766642  25578889999999999999999998888


Q ss_pred             CCccEEEEccccCCCC---cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-----C
Q 020927          107 LPLNILINNAGIMATP---FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-----P  178 (319)
Q Consensus       107 ~~id~lv~nag~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-----p  178 (319)
                      +++|+||||||+..+.   ...+.++|+.++++|+.+++.+++.++|.|++..   ...++||++||..+....     +
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~---~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP---NKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC---CCCCeEEEEecCccccccCCCcCC
Confidence            8999999999985432   2457789999999999999999999999997641   124799999999876421     1


Q ss_pred             CCCcCcCCC-------------CCCCCCccccchhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcc-cCCcccCch-
Q 020927          179 EGIRFDRIN-------------DQSGYNRFSAYGQSKLANVLHTSELARRLK-EDGVDITANSVHPGAI-TTNLFRNIS-  242 (319)
Q Consensus       179 ~~~~~~~~~-------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~g~~i~v~~v~PG~v-~t~~~~~~~-  242 (319)
                      ...+++++.             ..+.+.++..|++||+++..+++.|++++. +.|  |+|++|+||.| +|++.+... 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~~~~  234 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFREHVP  234 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCcccccccH
Confidence            122333321             224456778899999999999999999985 357  99999999999 699876431 


Q ss_pred             hHHHH---HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc-----cccChhccCHHHHHHHHHHHHHHHH
Q 020927          243 FFSGL---VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV-----AQASSQAVNTELAQKLWDFSSDLIY  313 (319)
Q Consensus       243 ~~~~~---~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~  313 (319)
                      .....   ..........+|++.|+.+++++..+.. ..+|.|+..++.     ...+....|+++++++|++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  312 (314)
T TIGR01289       235 LFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVG  312 (314)
T ss_pred             HHHHHHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhc
Confidence            11111   1111222357899999999999864443 468999986543     3566778899999999999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-38  Score=281.91  Aligned_cols=233  Identities=16%  Similarity=0.179  Sum_probs=188.3

Q ss_pred             CCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++|++|||||  ++|||+++|++|+++|++|++++|.... ++..+++..+. + ....+++|++++++++++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEF-G-SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhc-C-CcceeeccCCCHHHHHHHHHHHHH
Confidence            67999999997  6899999999999999999998764221 22233333332 2 234689999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC-------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMATP-------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++++|+||||||+....       .+.+.++|++.+++|+.+++.+++.++|+|.+       .|+||++||..+..+.
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~~~  153 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAERVV  153 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEeccccccCC
Confidence            999999999999985421       23567899999999999999999999999943       5799999998887654


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~  253 (319)
                      |               .+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++.....    ....+....+.
T Consensus       154 ~---------------~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  216 (260)
T PRK06997        154 P---------------NYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAASGIKDFGKILDFVESNAPL  216 (260)
T ss_pred             C---------------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhccccchhhHHHHHHhcCcc
Confidence            4               367899999999999999999999999  99999999999998754321    11122233455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..+|+|+++.++||+ ++.+.+++|+.+. |+|
T Consensus       217 ~r~~~pedva~~~~~l~-s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        217 RRNVTIEEVGNVAAFLL-SDLASGVTGEITHVDSG  250 (260)
T ss_pred             cccCCHHHHHHHHHHHh-CccccCcceeEEEEcCC
Confidence            66789999999999999 6888999999888 444

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.4e-38  Score=285.51  Aligned_cols=272  Identities=35%  Similarity=0.506  Sum_probs=212.5

Q ss_pred             EEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           33 IVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        33 lItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      |||||++|||++++++|+++| ++|++++|+.+..++..+++...  +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 89999999988877776666422  457888999999999999999999988889999


Q ss_pred             EEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-----CCCCcC
Q 020927          112 LINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-----PEGIRF  183 (319)
Q Consensus       112 lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-----p~~~~~  183 (319)
                      ||||||+...   ..+.+.++|++++++|+.|++.+++.++|.|.+..   ...++||++||..+..+.     +....+
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD---YPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCCCEEEEEeccccccccccccCCCccch
Confidence            9999998543   23567789999999999999999999999998641   014799999998875321     111111


Q ss_pred             cCCC---------------CCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcc-cCCcccCch-hHH
Q 020927          184 DRIN---------------DQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHPGAI-TTNLFRNIS-FFS  245 (319)
Q Consensus       184 ~~~~---------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~PG~v-~t~~~~~~~-~~~  245 (319)
                      +++.               ..+.+.++..|++||+|+..+++.+++++.+ +|  |+||+|+||+| .|++.+... ...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCccccccccHHHH
Confidence            1111               1123456788999999999999999999975 57  99999999999 788876431 111


Q ss_pred             HH---HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc-----cccChhccCHHHHHHHHHHHHHHH
Q 020927          246 GL---VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV-----AQASSQAVNTELAQKLWDFSSDLI  312 (319)
Q Consensus       246 ~~---~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~  312 (319)
                      ..   ....+..++.+|+++|+.+++++. +.....+|.|+..+|.     .+.++...|++.++++|+++++++
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~-~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~  307 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVS-DPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLV  307 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcc-ccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhc
Confidence            11   122333446799999999999995 5556789999985543     356677889999999999999886

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-38  Score=280.91  Aligned_cols=232  Identities=20%  Similarity=0.174  Sum_probs=187.3

Q ss_pred             CCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      .++++|++|||||  ++|||+++|++|+++|++|++++|+.  +..+++.+++     +.++.++.+|++++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHH
Confidence            4478999999999  89999999999999999999999864  3333333322     2367889999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          101 EFKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ++.+.++++|+||||||+...      ..+.+.++|++.+++|+.+++.+++.++|+|++       .|+||++++.. .
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~-~  149 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDA-T  149 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeecc-c
Confidence            999999999999999998632      234567889999999999999999999999963       47999998653 2


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHH
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGL  250 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~  250 (319)
                      .+               ...+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......    ...+.+.
T Consensus       150 ~~---------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  212 (256)
T PRK07889        150 VA---------------WPAYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKAIPGFELLEEGWDER  212 (256)
T ss_pred             cc---------------CCccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhcccCcHHHHHHHHhc
Confidence            22               22367799999999999999999999999  999999999999998654321    1112223


Q ss_pred             Hhhh-hcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          251 LGKY-VIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       251 ~~~~-~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+.. ++.+|+|+|+.++||+ ++...+++|+++..+|
T Consensus       213 ~p~~~~~~~p~evA~~v~~l~-s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        213 APLGWDVKDPTPVARAVVALL-SDWFPATTGEIVHVDG  249 (256)
T ss_pred             CccccccCCHHHHHHHHHHHh-CcccccccceEEEEcC
Confidence            3443 4679999999999999 6888899999888443

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.4e-39  Score=279.96  Aligned_cols=198  Identities=31%  Similarity=0.307  Sum_probs=178.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+..+.||+|+|||||+|||.++|++|+++|++++++.|....++...+++++..+..+++.+++|++|++++.++++++
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            45668999999999999999999999999999999999999999999899988876657999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCCC--cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.+|++|+||||||+....  ...+.+++...|++|++|+..++++++|+|+++     +.|+||+|+|++|+.+.|. 
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-----~~GhIVvisSiaG~~~~P~-  159 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-----NDGHIVVISSIAGKMPLPF-  159 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-----CCCeEEEEeccccccCCCc-
Confidence            99999999999999987642  245567888999999999999999999999985     2599999999999998774 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI  241 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~  241 (319)
                                    .+.|++||+|+.+|.++|+.|+.+.+..|++ +|+||+|+|++....
T Consensus       160 --------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  160 --------------RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             --------------ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence                          4699999999999999999999998866777 999999999976543

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-38  Score=283.27  Aligned_cols=242  Identities=21%  Similarity=0.254  Sum_probs=198.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM---------AACREVKKAIVKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      .++||++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...  +.++.++.+|+++++++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            36899999999999999999999999999999998875         6666777776544  557889999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCccc
Q 020927           97 KFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRH  173 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~  173 (319)
                      ++++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.+.... ....|+||++||.++
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            9999999999999999999998643  3456778999999999999999999999999753211 112479999999998


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      ..+.|+               +..|++||+|+++|+++|+.|++++|  |+||+|+|| +.|++....  ........+.
T Consensus       161 ~~~~~~---------------~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~~~--~~~~~~~~~~  220 (286)
T PRK07791        161 LQGSVG---------------QGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTETV--FAEMMAKPEE  220 (286)
T ss_pred             CcCCCC---------------chhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcchhh--HHHHHhcCcc
Confidence            876553               68999999999999999999999999  999999999 789875432  1222111222


Q ss_pred             h--hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          254 Y--VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       254 ~--~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      .  ...+|+|+|++++||+ ++...+++|+++. ++|...
T Consensus       221 ~~~~~~~pedva~~~~~L~-s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        221 GEFDAMAPENVSPLVVWLG-SAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             cccCCCCHHHHHHHHHHHh-CchhcCCCCcEEEEcCCceE
Confidence            1  3468999999999999 6888999999888 555443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.9e-38  Score=280.01  Aligned_cols=243  Identities=31%  Similarity=0.323  Sum_probs=203.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +++.++||++|||||++|||+++|++|++.|++|++++|+.+.++++...+.... .+.++..+.||+++++++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3577999999999999999999999999999999999999999988888876642 246799999999999999999999


Q ss_pred             HHhc-CCCccEEEEccccCCC---CcccCcccccchhhhhhhH-HHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          102 FKSS-GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIG-HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       102 i~~~-~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~-~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ..++ +|++|+||||||....   ..+.+.+.|++.+++|+.| .+.+.+.+.+++.+.     +.+.|+++||.++..+
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-----~gg~I~~~ss~~~~~~  156 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-----KGGSIVNISSVAGVGP  156 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-----CCceEEEEeccccccC
Confidence            9888 7999999999998764   3578899999999999995 666667777777663     5889999999988875


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------hHHH---
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------FFSG---  246 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------~~~~---  246 (319)
                      .+.              ....|+++|+|++.|+|++|.|++++|  ||||+|+||.+.|++ ....       .+..   
T Consensus       157 ~~~--------------~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~  219 (270)
T KOG0725|consen  157 GPG--------------SGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATD  219 (270)
T ss_pred             CCC--------------CcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCc-cccccccchhhHHhhhhc
Confidence            332              126899999999999999999999999  999999999999998 2211       1111   


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .....+.+++..|+|+++.++||+ ++.+++++|+.+..+|.
T Consensus       220 ~~~~~p~gr~g~~~eva~~~~fla-~~~asyitG~~i~vdgG  260 (270)
T KOG0725|consen  220 SKGAVPLGRVGTPEEVAEAAAFLA-SDDASYITGQTIIVDGG  260 (270)
T ss_pred             cccccccCCccCHHHHHHhHHhhc-CcccccccCCEEEEeCC
Confidence            122456788899999999999999 46666999998885443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=7.8e-38  Score=280.30  Aligned_cols=243  Identities=24%  Similarity=0.266  Sum_probs=204.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++++|+++++++.+++++
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999999999999988887777777553  55789999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC-----------------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCe
Q 020927          102 FKSSGLPLNILINNAGIMAT-----------------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGR  164 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~-----------------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~  164 (319)
                      +.++++++|++|||||+..+                 ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~  155 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-----KGGN  155 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcE
Confidence            99999999999999996432                 1235567899999999999999999999999764     3689


Q ss_pred             EEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--
Q 020927          165 IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--  242 (319)
Q Consensus       165 ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--  242 (319)
                      ||++||..+..+.|               ++..|++||++++.++++++.++++.|  |+||+|+||++.|++.+...  
T Consensus       156 ii~isS~~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~  218 (278)
T PRK08277        156 IINISSMNAFTPLT---------------KVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRALLFN  218 (278)
T ss_pred             EEEEccchhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhhhhcc
Confidence            99999999887544               367899999999999999999999999  99999999999999754321  


Q ss_pred             -------hHHHHHHHHhhhhcCCHHHHHHHHHHHhcCC-CccCCCccccc-CCccc
Q 020927          243 -------FFSGLVGLLGKYVIKNVEQGAATTCYVALHP-HVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       243 -------~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~-~~~~~~G~~~~-~~g~~  289 (319)
                             ....+....+..++.+|+|+|++++||+ ++ .+.++||+.+. |+|..
T Consensus       219 ~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~-s~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        219 EDGSLTERANKILAHTPMGRFGKPEELLGTLLWLA-DEKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             ccccchhHHHHHhccCCccCCCCHHHHHHHHHHHc-CccccCCcCCCEEEECCCee
Confidence                   1112223345667789999999999998 67 88999999888 55544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=3.2e-37  Score=282.17  Aligned_cols=281  Identities=33%  Similarity=0.487  Sum_probs=218.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999998888777776432  45788999999999999999999887


Q ss_pred             cCCCccEEEEccccCCCC---cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC-----
Q 020927          105 SGLPLNILINNAGIMATP---FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS-----  176 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~-----  176 (319)
                      .++++|+||||||+....   ...+.++++..+++|+.|++.+++.++|.|++..   ...+|||++||..+...     
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSP---APDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC---CCCceEEEEcccccCccccCCc
Confidence            778999999999986442   3457789999999999999999999999998641   11369999999876431     


Q ss_pred             --CCCCCcCcCCC-------------CCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcc-cCCccc
Q 020927          177 --YPEGIRFDRIN-------------DQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHPGAI-TTNLFR  239 (319)
Q Consensus       177 --~p~~~~~~~~~-------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~PG~v-~t~~~~  239 (319)
                        .|...+++++.             ..+.+.++..|+.||.+...+++.|++++.. .|  |+|++|+||.| .|++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~  234 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLFR  234 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCcccc
Confidence              12222333221             1234566789999999999999999999953 57  99999999999 588876


Q ss_pred             Cchh-HHHHHHH---HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc---------cccChhccCHHHHHHHHH
Q 020927          240 NISF-FSGLVGL---LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV---------AQASSQAVNTELAQKLWD  306 (319)
Q Consensus       240 ~~~~-~~~~~~~---~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~---------~~~~~~~~~~~~~~~~~~  306 (319)
                      .... ...+...   .....+.++++.++.+++++.++.. ..+|.|+.++..         ...++...|++.++++|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~  313 (322)
T PRK07453        235 NTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWD  313 (322)
T ss_pred             cCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHH
Confidence            5422 1111111   1122346889999999999876655 579999984332         234567789999999999


Q ss_pred             HHHHHHH
Q 020927          307 FSSDLIY  313 (319)
Q Consensus       307 ~~~~~~~  313 (319)
                      +++++++
T Consensus       314 ~s~~~~~  320 (322)
T PRK07453        314 LSAKLVG  320 (322)
T ss_pred             HHHHHhC
Confidence            9998875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=275.42  Aligned_cols=239  Identities=20%  Similarity=0.262  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++.+|++|||||++|||++++++|+++|++|++++|+++.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888877777654  4578889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||+|....  ..+.+.++|++.+++|+.+++.+++.+++.|.++     +.++||++||..+..+.+   
T Consensus        82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~---  153 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-----QAGKIINICSMQSELGRD---  153 (254)
T ss_pred             HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEccchhccCCC---
Confidence            999999999999997543  3356778999999999999999999999999763     368999999988776433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~  257 (319)
                                  ++..|+++|++++.++++++.+++++|  |++|+|+||+++|++.....    .........+..++.
T Consensus       154 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~  219 (254)
T PRK08085        154 ------------TITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWG  219 (254)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCc
Confidence                        467899999999999999999999999  99999999999999876431    112222334556677


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+|++++|++ ++.+.+++|+.+. ++|
T Consensus       220 ~~~~va~~~~~l~-~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        220 DPQELIGAAVFLS-SKASDFVNGHLLFVDGG  249 (254)
T ss_pred             CHHHHHHHHHHHh-CccccCCcCCEEEECCC
Confidence            9999999999999 6889999999887 444

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.7e-37  Score=274.53  Aligned_cols=239  Identities=18%  Similarity=0.203  Sum_probs=198.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++++||++|||||++|||++++++|+++|++|++++++..  ++..+.+...  +.++.++++|++++++++++++++
T Consensus         4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   79 (253)
T PRK08993          4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERA   79 (253)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999887643  3334444433  457889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|++|||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++    +..|+||++||..+..+.+  
T Consensus        80 ~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~--  153 (253)
T PRK08993         80 VAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ----GNGGKIINIASMLSFQGGI--  153 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC----CCCeEEEEECchhhccCCC--
Confidence            9999999999999998643  3356778999999999999999999999999763    1257999999998876533  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (319)
                                   .+..|+++|+|+++++++++.++.++|  |+||+|+||+++|++.....    ....+.+.++..++
T Consensus       154 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  218 (253)
T PRK08993        154 -------------RVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW  218 (253)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCC
Confidence                         367899999999999999999999999  99999999999999865431    11123334556677


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|+|+|+.++||+ ++...+++|+.+..+|
T Consensus       219 ~~p~eva~~~~~l~-s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        219 GLPSDLMGPVVFLA-SSASDYINGYTIAVDG  248 (253)
T ss_pred             cCHHHHHHHHHHHh-CccccCccCcEEEECC
Confidence            89999999999999 6888999999877443

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-37  Score=279.54  Aligned_cols=237  Identities=24%  Similarity=0.213  Sum_probs=196.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|+++++++.+++++
T Consensus        44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~  121 (294)
T PRK07985         44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHE  121 (294)
T ss_pred             CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999988643  3444444444332  45788999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.+.++++|++|||||...   +..+.+.++|++++++|+.+++.+++.++|+|.+       .++||++||..+..+.|
T Consensus       122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~~~~  194 (294)
T PRK07985        122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQPSP  194 (294)
T ss_pred             HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhccCCC
Confidence            9999999999999999743   2345678899999999999999999999999864       47999999999887544


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKY  254 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (319)
                      +               +..|++||++++.+++.++.+++++|  |+||+|+||++.|++....    .....+....+..
T Consensus       195 ~---------------~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  257 (294)
T PRK07985        195 H---------------LLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK  257 (294)
T ss_pred             C---------------cchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCccccccccCCCHHHHHHHhccCCCC
Confidence            3               67899999999999999999999999  9999999999999985321    1122233344555


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ++.+|+|+|++++||+ ++.+.+++|+.+..+|
T Consensus       258 r~~~pedva~~~~fL~-s~~~~~itG~~i~vdg  289 (294)
T PRK07985        258 RAGQPAELAPVYVYLA-SQESSYVTAEVHGVCG  289 (294)
T ss_pred             CCCCHHHHHHHHHhhh-ChhcCCccccEEeeCC
Confidence            6789999999999999 6888999999887443

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-38  Score=278.18  Aligned_cols=235  Identities=22%  Similarity=0.237  Sum_probs=198.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987777665544     457889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          106 GLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      ++++|+||||||+... ..+.+.+.|++.+++|+.+++.+++.++|.|.+      +.++||++||.++..+.|      
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~g~ii~isS~~~~~~~~------  145 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLAR------GGGAIVNFTSISAKFAQT------  145 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc------CCcEEEEECchhhccCCC------
Confidence            9999999999997543 334567889999999999999999999999963      368999999998887544      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHH-HHHhhhhcCC
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLV-GLLGKYVIKN  258 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~-~~~~~~~~~~  258 (319)
                               .+..|+++|++++.++++++.++++.|  |+||+|+||+++|++.....     ...... ...+..++.+
T Consensus       146 ---------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  214 (261)
T PRK08265        146 ---------GRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGD  214 (261)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccC
Confidence                     367899999999999999999999999  99999999999999865431     011111 1234456679


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+|+.++|++ ++...+++|+.+. ++|..
T Consensus       215 p~dva~~~~~l~-s~~~~~~tG~~i~vdgg~~  245 (261)
T PRK08265        215 PEEVAQVVAFLC-SDAASFVTGADYAVDGGYS  245 (261)
T ss_pred             HHHHHHHHHHHc-CccccCccCcEEEECCCee
Confidence            999999999999 6888999999877 55543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.8e-38  Score=272.14  Aligned_cols=223  Identities=28%  Similarity=0.325  Sum_probs=197.0

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.-+.+|++||||||++|+|+++|.+||++|+++++++.|.+..+++.++++..  + +++.+.||+++.+++.++.+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999999999999999876  3 8999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +++.|.+|+||||||++..  ..+.+.+.+++++++|+.|++...|+|+|.|.+.     ++|.||.|+|.+|..+.|+ 
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-----~~GHIV~IaS~aG~~g~~g-  182 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-----NNGHIVTIASVAGLFGPAG-  182 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-----CCceEEEehhhhcccCCcc-
Confidence            9999999999999999765  4578889999999999999999999999999885     6999999999999997664 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCc-EEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVD-ITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                    ...|++||+|+.+|.++|..|+...++. |++..|+|++++|+|......+.      ......+|
T Consensus       183 --------------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~------~l~P~L~p  242 (300)
T KOG1201|consen  183 --------------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP------TLAPLLEP  242 (300)
T ss_pred             --------------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc------cccCCCCH
Confidence                          7899999999999999999999887654 99999999999999987521111      11223589


Q ss_pred             HHHHHHHHHHhcCCC
Q 020927          260 EQGAATTCYVALHPH  274 (319)
Q Consensus       260 ~~va~~i~~l~~s~~  274 (319)
                      +++|+.++..+....
T Consensus       243 ~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  243 EYVAKRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999886433

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=274.05  Aligned_cols=233  Identities=21%  Similarity=0.183  Sum_probs=195.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +++|||||++|||++++++|+++|++|++++|+++.+++..+++...   .++.++.+|++++++++++++++.++++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999999999998888887777542   368899999999999999999999999999


Q ss_pred             cEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          110 NILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       110 d~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      |+||||||....    ..+.+.++|.+.+++|+.+++.+.+.++|.|.+.    +..|+||++||..+..+.|       
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~----~~~g~iv~isS~~~~~~~~-------  146 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK----KMKGVLVYLSSVSVKEPMP-------  146 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc----CCCCEEEEEeCcccCCCCC-------
Confidence            999999997532    2345667888999999999999999999988642    2368999999998876544       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----------hh----HHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----------SF----FSGLVGLL  251 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----------~~----~~~~~~~~  251 (319)
                              ++..|+++|+++.+|+++|+.+++++|  |+||+|+||+++|++.+..          ..    ...+....
T Consensus       147 --------~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T PRK08340        147 --------PLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT  216 (259)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC
Confidence                    367899999999999999999999999  9999999999999986421          00    11222334


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +..++.+|+|+|++++||+ ++.+.+++|+.+..+|
T Consensus       217 p~~r~~~p~dva~~~~fL~-s~~~~~itG~~i~vdg  251 (259)
T PRK08340        217 PLKRTGRWEELGSLIAFLL-SENAEYMLGSTIVFDG  251 (259)
T ss_pred             CccCCCCHHHHHHHHHHHc-CcccccccCceEeecC
Confidence            5566789999999999999 6889999999887444

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-37  Score=271.15  Aligned_cols=239  Identities=24%  Similarity=0.299  Sum_probs=203.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...  +.++.++.+|+++.++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988888877777554  4568889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|++|||||...   +..+.+.+++++.+++|+.+++.+++.++|+|.+.     ..++||++||..+..+.|  
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~--  153 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-----GGGSIVNVASVNGVSPGD--  153 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCcEEEEECchhhcCCCC--
Confidence            99999999999999643   23356678899999999999999999999999764     368999999988876533  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (319)
                                   ++..|++||++++.++++++.++.++|  |+||+|+||+++|++....    ..+.......+..++
T Consensus       154 -------------~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK07035        154 -------------FQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRH  218 (252)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCc
Confidence                         467899999999999999999999999  9999999999999986543    122223333455567


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|+|+|+.+++++ ++...+++|+.+..+|
T Consensus       219 ~~~~~va~~~~~l~-~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        219 AEPSEMAGAVLYLA-SDASSYTTGECLNVDG  248 (252)
T ss_pred             CCHHHHHHHHHHHh-CccccCccCCEEEeCC
Confidence            89999999999999 6888899999887443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-37  Score=272.60  Aligned_cols=240  Identities=23%  Similarity=0.253  Sum_probs=200.9

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+.++++||++|||||++|||++++++|+++|++|++++|+ +..++..+.+...  +.++.++.+|+++++++.+++++
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~   84 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKE   84 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998 4455555554433  45788999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|++|||+|....  ..+.+.++|++.+++|+.+++.+++.++|+|.+.     +.++||++||..+..+.+ 
T Consensus        85 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  158 (258)
T PRK06935         85 ALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-----GSGKIINIASMLSFQGGK-  158 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-----CCeEEEEECCHHhccCCC-
Confidence            99999999999999997543  3345678899999999999999999999999764     367999999998876533 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~  255 (319)
                                    .++.|+++|++++++++++++++.+.|  |+||+|+||+++|++.....    .........+..+
T Consensus       159 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (258)
T PRK06935        159 --------------FVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGR  222 (258)
T ss_pred             --------------CchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhhcccChHHHHHHHhcCCCCC
Confidence                          367899999999999999999999999  99999999999999764331    1122333445667


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.+|+|++++++||+ ++...+++|+.+..+|
T Consensus       223 ~~~~~dva~~~~~l~-s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        223 WGEPDDLMGAAVFLA-SRASDYVNGHILAVDG  253 (258)
T ss_pred             CCCHHHHHHHHHHHc-ChhhcCCCCCEEEECC
Confidence            789999999999999 6888999999888443

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-37  Score=270.81  Aligned_cols=234  Identities=28%  Similarity=0.349  Sum_probs=192.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++|++|||||++|||++++++|+++|++|+++. |+.+..++...++...  +.++..+.+|+++.+++..+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 6667777776666544  456788999999999999999888652


Q ss_pred             ----CC--CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          106 ----GL--PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       106 ----~~--~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                          ++  ++|+||||||+...  ..+.+.+.|++++++|+.+++.+++.++|.|.+       .++||++||..+..+.
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL  152 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCcccccCC
Confidence                33  89999999997533  335667889999999999999999999999964       4799999999988754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHH-Hhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGL-LGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~-~~~  253 (319)
                      |+               +..|++||+++++++++++.+++++|  |+||+|+||+++|++.....   ........ .+.
T Consensus       153 ~~---------------~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK12747        153 PD---------------FIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAF  215 (252)
T ss_pred             CC---------------chhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhhcccCHHHHHHHHhcCcc
Confidence            43               67899999999999999999999999  99999999999999865431   11112211 134


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .++.+|+|+|+.++||+ ++...+++|+.+..+|
T Consensus       216 ~~~~~~~dva~~~~~l~-s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        216 NRLGEVEDIADTAAFLA-SPDSRWVTGQLIDVSG  248 (252)
T ss_pred             cCCCCHHHHHHHHHHHc-CccccCcCCcEEEecC
Confidence            55779999999999998 6888899999887444

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=274.63  Aligned_cols=233  Identities=21%  Similarity=0.220  Sum_probs=193.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.+++|++|||||++|||++++++|+++|++|++++|+++.++...+.+     +.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988776655443     44688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcc----cccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKD----NIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~----~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      .++++|+||||||+...   ..+.+.+    .|++++++|+.+++.+++.++|.|.+.      .++||+++|..+..+.
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~  150 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFYPG  150 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcCCC
Confidence            99999999999997532   2233434    388999999999999999999998753      5899999999988754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------h-hH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------S-FF  244 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------~-~~  244 (319)
                      +               +...|++||++++.|+++|+.++++ +  |+||+|+||+++|++....            . ..
T Consensus       151 ~---------------~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  212 (263)
T PRK06200        151 G---------------GGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA  212 (263)
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcCccccCCCCcccccccchh
Confidence            3               3578999999999999999999986 5  9999999999999975421            0 11


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc-CCc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA-DSN  287 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~-~~g  287 (319)
                      ..+....+..++.+|+|+|+.++||+ ++. +.+++|+.+. |+|
T Consensus       213 ~~~~~~~p~~r~~~~~eva~~~~fl~-s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        213 DMIAAITPLQFAPQPEDHTGPYVLLA-SRRNSRALTGVVINADGG  256 (263)
T ss_pred             HHhhcCCCCCCCCCHHHHhhhhhhee-cccccCcccceEEEEcCc
Confidence            22233356677889999999999999 577 8999999888 444

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=270.82  Aligned_cols=238  Identities=26%  Similarity=0.257  Sum_probs=202.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.+++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++.+++..+++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999998888777777554  55789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|++|||+|....   ..+.+.+++++++++|+.+++.+++.++|.|.+.     ..+++|++||..+..+.+   
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~---  152 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-----GGGAIVNTASVAGLGAAP---  152 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhccCCC---
Confidence            99999999999997543   2356778999999999999999999999999764     357999999998887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHHHHHhhhhc
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLVGLLGKYVI  256 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~  256 (319)
                                  ++..|+++|+++++|+++++.++.++|  |+|++|+||+++|++.....     ....+....+..+.
T Consensus       153 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (253)
T PRK06172        153 ------------KMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRI  218 (253)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCc
Confidence                        368899999999999999999999988  99999999999999876531     11112222344566


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|+++++.++||+ ++...+++|+++..+|
T Consensus       219 ~~p~~ia~~~~~l~-~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        219 GKVEEVASAVLYLC-SDGASFTTGHALMVDG  248 (253)
T ss_pred             cCHHHHHHHHHHHh-CccccCcCCcEEEECC
Confidence            79999999999999 6778899999888443

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=270.69  Aligned_cols=240  Identities=23%  Similarity=0.193  Sum_probs=202.8

Q ss_pred             CCCCCCEEEEeCCCC-chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASS-GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~-gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++|++|||||+| |||+++++.|+++|++|++++|+.+.++...+.+....+..++.++.+|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            446799999999985 9999999999999999999999998888888777665544578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||+|....  ..+.+.+.|.+.+++|+.+++.+++.++|.|...    ...++||+++|..+..+.+   
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~ss~~~~~~~~---  165 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRAR----GHGGVIVNNASVLGWRAQH---  165 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEeCchhhcCCCC---
Confidence            888999999999997543  3356678899999999999999999999999764    1268999999988776533   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (319)
                                  ++..|+++|+|+++++++++.+++++|  |+||+|+||+++|++....   .....+....+..+..+
T Consensus       166 ------------~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~  231 (262)
T PRK07831        166 ------------GQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAE  231 (262)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcC
Confidence                        367899999999999999999999999  9999999999999986543   11222333344566779


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+|+|+.++||+ ++.+.+++|+.+..+
T Consensus       232 p~~va~~~~~l~-s~~~~~itG~~i~v~  258 (262)
T PRK07831        232 PWEVANVIAFLA-SDYSSYLTGEVVSVS  258 (262)
T ss_pred             HHHHHHHHHHHc-CchhcCcCCceEEeC
Confidence            999999999999 688899999988743

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=275.89  Aligned_cols=237  Identities=25%  Similarity=0.248  Sum_probs=197.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA--ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++||++|||||++|||++++++|+++|++|++++++.+  ..++..+.+...  +.++.++.+|+++.++++++++++
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHH
Confidence            4588999999999999999999999999999999887543  344555555443  557889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+.++++|+||||||+...   ..+.+.++|++++++|+.+++.+++.++|+|.+       .++||++||..++.+.+ 
T Consensus       129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~-  200 (300)
T PRK06128        129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQPSP-  200 (300)
T ss_pred             HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccCCCC-
Confidence            9999999999999997532   335678899999999999999999999999854       57999999999887544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~  255 (319)
                                    ++..|++||++++.|+++|+.++.++|  |+||+|+||+++|++......    ...+....+..+
T Consensus       201 --------------~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r  264 (300)
T PRK06128        201 --------------TLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKR  264 (300)
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCC
Confidence                          367899999999999999999999999  999999999999998643211    112222345566


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +..|+|+|..+++|+ ++...+++|+.+..+|.
T Consensus       265 ~~~p~dva~~~~~l~-s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        265 PGQPVEMAPLYVLLA-SQESSYVTGEVFGVTGG  296 (300)
T ss_pred             CcCHHHHHHHHHHHh-CccccCccCcEEeeCCC
Confidence            779999999999998 67788999998885443

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=8.1e-38  Score=274.60  Aligned_cols=225  Identities=33%  Similarity=0.412  Sum_probs=196.6

Q ss_pred             CCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC-CCccEE
Q 020927           36 GAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG-LPLNIL  112 (319)
Q Consensus        36 Gas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~-~~id~l  112 (319)
                      |++  +|||+++|++|+++|++|++++|+.+.++...+++.++.+ .+  .+.+|++++++++++++++.+.+ |++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            667  9999999999999999999999999998888888877764 33  59999999999999999999998 999999


Q ss_pred             EEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          113 INNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       113 v~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |||+|....      ..+.+.+.|.+.+++|+.+++.+++.++|+|.+       .++||++||..+..+.|.       
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~~~~~-------  143 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQRPMPG-------  143 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTSBSTT-------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhcccCcc-------
Confidence            999997653      224567899999999999999999999998876       579999999998876554       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCCHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~  261 (319)
                              +..|+++|+|+++|+++|+.++++ +|  ||||+|+||++.|++.....    +.+.+.+..+..++.+|+|
T Consensus       144 --------~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~e  213 (241)
T PF13561_consen  144 --------YSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEE  213 (241)
T ss_dssp             --------THHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHH
T ss_pred             --------chhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHH
Confidence                    679999999999999999999999 99  99999999999999865542    3344555677788789999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|++++||+ ++.+.++||+.|. |+|.
T Consensus       214 vA~~v~fL~-s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  214 VANAVLFLA-SDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHH-SGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHh-CccccCccCCeEEECCCc
Confidence            999999999 7999999999888 5554

...

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.6e-36  Score=268.38  Aligned_cols=239  Identities=25%  Similarity=0.311  Sum_probs=202.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.+++.++++.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988888777776544  5578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +.++++|++|||||...+ ..+.+.+++++.+++|+.+++.+++.++|+|.+.     +.++||++||..+..+.+    
T Consensus        84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~----  154 (255)
T PRK06113         84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNI----  154 (255)
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCcEEEEEecccccCCCC----
Confidence            989999999999997543 3356678899999999999999999999999753     357999999988876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--h-hHHHHHHHHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--S-FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~  259 (319)
                                 ++..|+++|+++++|+++++.++.+.|  |+||+|+||+++|++....  + ......+..+..++.+|
T Consensus       155 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK06113        155 -----------NMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQP  221 (255)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCH
Confidence                       467899999999999999999999999  9999999999999986643  1 11222333444556799


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|++++++|++ ++...+++|+.+..+|
T Consensus       222 ~d~a~~~~~l~-~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        222 QDIANAALFLC-SPAASWVSGQILTVSG  248 (255)
T ss_pred             HHHHHHHHHHc-CccccCccCCEEEECC
Confidence            99999999999 6888999999888444

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.9e-36  Score=268.24  Aligned_cols=242  Identities=26%  Similarity=0.303  Sum_probs=206.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ++++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+.+....++.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999888888888877666678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||+|....  ..+.+.+++++.+++|+.+++.++++++|+|.++     +.++||++||..+..+.+  
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~--  155 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-----ASSAIVNIGSVSGLTHVR--  155 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCceEEEECccccCCCCC--
Confidence            9999999999999997533  3356788999999999999999999999999764     367999999998876533  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (319)
                                   +...|+++|++++.+++.++.++.+.|  |+||+|+||+++|++.....    .........+..+.
T Consensus       156 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK09242        156 -------------SGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRV  220 (257)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCC
Confidence                         367899999999999999999999988  99999999999999876431    11222233344556


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|++++.++++++ ++...+++|+.+..+|
T Consensus       221 ~~~~~va~~~~~l~-~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        221 GEPEEVAAAVAFLC-MPAASYITGQCIAVDG  250 (257)
T ss_pred             cCHHHHHHHHHHHh-CcccccccCCEEEECC
Confidence            79999999999999 5777889999887443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.4e-36  Score=267.60  Aligned_cols=237  Identities=23%  Similarity=0.273  Sum_probs=196.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||++|||||++|||.+++++|+++|++|++++|+..  .+..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999753  3333334332  45789999999999999999999998


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||||....  ..+.+.+.|++.+++|+.+++.+++.+++.|.++.    ..++||++||..+..+.+    
T Consensus        77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~~~----  148 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQG----RGGKIINIASMLSFQGGI----  148 (248)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEecHHhccCCC----
Confidence            88999999999998654  23456788999999999999999999999997631    257999999998876533    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~  258 (319)
                                 ....|++||++++.+++.++.++.++|  |+||+|+||+++|++.....    .........+..++.+
T Consensus       149 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (248)
T TIGR01832       149 -----------RVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGT  215 (248)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcC
Confidence                       357899999999999999999999999  99999999999999865431    1112333455667789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      |+|+|+++++++ ++...+++|+++. |+|
T Consensus       216 ~~dva~~~~~l~-s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       216 PDDIGGPAVFLA-SSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHHHHHHHHc-CccccCcCCcEEEeCCC
Confidence            999999999999 6778899999887 444

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.6e-36  Score=268.43  Aligned_cols=236  Identities=24%  Similarity=0.312  Sum_probs=199.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..+....++...  +.++.++.+|+++++++.++++++.++++
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999999988888777777554  45788999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||||+...  ..+.+.+++++++++|+.+++.+++.+++.|++..    ..++||++||..+..+.|+      
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~------  148 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLG----HGGKIINATSQAGVVGNPE------  148 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCEEEEECccccccCCCC------
Confidence            99999999997543  33556788999999999999999999999997531    2579999999988775443      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-------------HHHHHHHHh
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-------------FSGLVGLLG  252 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~  252 (319)
                               ...|+++|++++.+++.++.++.++|  |+||+|+||+++|++......             ...+....+
T Consensus       149 ---------~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (256)
T PRK08643        149 ---------LAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDIT  217 (256)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCC
Confidence                     67899999999999999999999999  999999999999998653210             111223345


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..++.+|+++|+.++||+ ++...+++|+.+..+|
T Consensus       218 ~~~~~~~~~va~~~~~L~-~~~~~~~~G~~i~vdg  251 (256)
T PRK08643        218 LGRLSEPEDVANCVSFLA-GPDSDYITGQTIIVDG  251 (256)
T ss_pred             CCCCcCHHHHHHHHHHHh-CccccCccCcEEEeCC
Confidence            566779999999999999 6889999999888443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-36  Score=267.75  Aligned_cols=236  Identities=24%  Similarity=0.301  Sum_probs=194.9

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           26 DGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRN-----------MAACREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        26 ~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+.+...  +.++.++++|++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5889999999999  599999999999999999988642           22233444444433  56889999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                      +++.++++++.+.++++|++|||||....  ..+.+.++|++++++|+.+++.+.+.++|.|.+.     ..|+||++||
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS  155 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-----SGGRIINMTS  155 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-----CCeEEEEEcc
Confidence            99999999999999999999999997543  3467788999999999999999999999999763     3689999999


Q ss_pred             cccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH
Q 020927          171 RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL  250 (319)
Q Consensus       171 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~  250 (319)
                      ..+..+.|               ++..|+++|+++++|+++++.++.++|  |+||+|+||+++|++... .....+...
T Consensus       156 ~~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~~-~~~~~~~~~  217 (256)
T PRK12859        156 GQFQGPMV---------------GELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMTE-EIKQGLLPM  217 (256)
T ss_pred             cccCCCCC---------------CchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCCH-HHHHHHHhc
Confidence            98876544               478999999999999999999999999  999999999999986442 122223333


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+..++.+|+|+|+.++|++ ++...+++|+++..+|
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~-s~~~~~~~G~~i~~dg  253 (256)
T PRK12859        218 FPFGRIGEPKDAARLIKFLA-SEEAEWITGQIIHSEG  253 (256)
T ss_pred             CCCCCCcCHHHHHHHHHHHh-CccccCccCcEEEeCC
Confidence            45555679999999999998 6788899999888443

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=9.7e-37  Score=270.48  Aligned_cols=228  Identities=25%  Similarity=0.238  Sum_probs=191.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||++++++|+++|++|++++|+...             ..++.++.+|++++++++++++++.+
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998632             22588999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.+.     ..++||++||..+..+.|    
T Consensus        69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  139 (258)
T PRK06398         69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-----DKGVIINIASVQSFAVTR----  139 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEeCcchhccCCC----
Confidence            99999999999998533  3356778999999999999999999999999764     368999999998887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---------hH----HHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---------FF----SGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---------~~----~~~~~  249 (319)
                                 ++..|++||++++++++.++.|+.+ +  |+||+|+||+++|++.....         ..    ..+..
T Consensus       140 -----------~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (258)
T PRK06398        140 -----------NAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE  205 (258)
T ss_pred             -----------CCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh
Confidence                       3689999999999999999999975 4  99999999999999864321         00    11112


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..+..++.+|+|+|+.++|++ ++...+++|+.+. ++|..
T Consensus       206 ~~~~~~~~~p~eva~~~~~l~-s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        206 MHPMKRVGKPEEVAYVVAFLA-SDLASFITGECVTVDGGLR  245 (258)
T ss_pred             cCCcCCCcCHHHHHHHHHHHc-CcccCCCCCcEEEECCccc
Confidence            234556679999999999999 6888899999877 55543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=267.27  Aligned_cols=240  Identities=24%  Similarity=0.287  Sum_probs=203.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||++|||||++|||++++++|+++|++|++++|+++..++..+.+...  +.++.++.+|++++++++++++++
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~   81 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAF   81 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999998888777777544  457889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||+|....  ..+.+.+.|++++++|+.+++.+++.+.+.|.+.     ..++||++||..+..+.|  
T Consensus        82 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~--  154 (255)
T PRK07523         82 EAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-----GAGKIINIASVQSALARP--  154 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEEccchhccCCC--
Confidence            9999999999999998643  3356778899999999999999999999999764     367999999988776433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~  256 (319)
                                   ++..|+++|++++.+++.++.+++++|  |+||+|+||+++|++.....    ....+....+..++
T Consensus       155 -------------~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T PRK07523        155 -------------GIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRW  219 (255)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCC
Confidence                         367899999999999999999999999  99999999999999865431    11122233455667


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..|+|+|+++++|+ ++...+++|+.+..+|
T Consensus       220 ~~~~dva~~~~~l~-~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        220 GKVEELVGACVFLA-SDASSFVNGHVLYVDG  249 (255)
T ss_pred             cCHHHHHHHHHHHc-CchhcCccCcEEEECC
Confidence            78999999999999 6778899999777444

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=9e-37  Score=271.19  Aligned_cols=234  Identities=21%  Similarity=0.227  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.    . +.++.++.+|+++.+++.++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998766654332    1 45688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCc----ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSK----DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~----~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      .++++|+||||||+...   ..+.+.    +.|++.+++|+.+++.++++++|.|.+.      .+++|+++|..+..+.
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~~~  149 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFYPN  149 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceecCC
Confidence            99999999999997532   112222    4689999999999999999999999753      4789999998887653


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch------------hHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS------------FFS  245 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~------------~~~  245 (319)
                      +               +...|++||+++++|++.++.++++ +  |+||+|+||+++|++.....            ...
T Consensus       150 ~---------------~~~~Y~~sKaa~~~l~~~la~e~~~-~--irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  211 (262)
T TIGR03325       150 G---------------GGPLYTAAKHAVVGLVKELAFELAP-Y--VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGD  211 (262)
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHhhcc-C--eEEEEEecCCCcCCCccccccccccccccccchhh
Confidence            3               3578999999999999999999976 3  99999999999999864210            111


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ......+..++.+|+|+|+.++|++..+...+++|+.+..+|
T Consensus       212 ~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdg  253 (262)
T TIGR03325       212 MLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDG  253 (262)
T ss_pred             hhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecC
Confidence            122335667778999999999999943356789999888443

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-36  Score=294.46  Aligned_cols=239  Identities=23%  Similarity=0.312  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ....||++|||||++|||+++|++|+++|++|++++|+++.++++.+.+     +.++..+.+|+++++++.++++++.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999999988877666544     45678899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++++|+||||||+...   ..+.+.+.|++++++|+.+++.+++.++|+|.       +.|+||++||.++..+.|   
T Consensus       340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~g~iv~isS~~~~~~~~---  409 (520)
T PRK06484        340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS-------QGGVIVNLGSIASLLALP---  409 (520)
T ss_pred             HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc-------cCCEEEEECchhhcCCCC---
Confidence            99999999999998532   34567889999999999999999999999993       268999999999987654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHHHHHhhhhc
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLVGLLGKYVI  256 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~  256 (319)
                                  ++..|++||+++++|+++|+.+++++|  |+||+|+||+++|++.....     ....+.+..+..++
T Consensus       410 ------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (520)
T PRK06484        410 ------------PRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRL  475 (520)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCC
Confidence                        368999999999999999999999999  99999999999999865431     11223334455667


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccCh
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASS  293 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~  293 (319)
                      .+|+|+|+.++|++ ++...+++|+.+. ++|...+..
T Consensus       476 ~~~~dia~~~~~l~-s~~~~~~~G~~i~vdgg~~~~~~  512 (520)
T PRK06484        476 GDPEEVAEAIAFLA-SPAASYVNGATLTVDGGWTAFGD  512 (520)
T ss_pred             cCHHHHHHHHHHHh-CccccCccCcEEEECCCccCCCC
Confidence            79999999999999 6888899999887 666544443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=265.25  Aligned_cols=240  Identities=25%  Similarity=0.318  Sum_probs=199.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+ .+..+...+.+...  +.++.++.+|+++.+++.++++.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            45889999999999999999999999999999998884 44556666666544  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||||...+  ..+.+.+.|++.+++|+.+++.+++.++++|.+.    +..++||++||..+..+.|   
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~----~~~g~iv~~sS~~~~~~~~---  153 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH----DIKGNIINMSSVHEQIPWP---  153 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEccccccCCCC---
Confidence            999999999999997644  3356778899999999999999999999999764    1358999999988776544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h---hHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S---FFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~  257 (319)
                                  ++..|+++|+|+..+++.++.++.+.|  |+||+|+||+++|++.... .   .........+..++.
T Consensus       154 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (261)
T PRK08936        154 ------------LFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIG  219 (261)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCc
Confidence                        367899999999999999999999998  9999999999999986432 1   111222334556678


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+++++.++||+ ++...+++|+.+. ++|.
T Consensus       220 ~~~~va~~~~~l~-s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        220 KPEEIAAVAAWLA-SSEASYVTGITLFADGGM  250 (261)
T ss_pred             CHHHHHHHHHHHc-CcccCCccCcEEEECCCc
Confidence            9999999999999 6788899999777 5443

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.1e-36  Score=268.32  Aligned_cols=242  Identities=23%  Similarity=0.208  Sum_probs=197.3

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+.+.   .+.++.++++|++++++++++++
T Consensus        10 ~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         10 SLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---GEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             cccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---CCCceEEEEeecCCHHHHHHHHH
Confidence            344567889999999999999999999999999999999999877666655542   14578999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          101 EFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++.+.++++|+||||||....    ..+.+.++|++++++|+.+++++++++++.|.+.     +.++||+++|..+..+
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~~  161 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-----KKGSIVSLCSVASAIG  161 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCceEEEecChhhccc
Confidence            999999999999999997543    2356778999999999999999999999999763     3689999999988764


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHH----H
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGL----V  248 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~----~  248 (319)
                      .|               +...|++||++++.+++.++.+++++|  |+||+|+||.+.|++....    ......    .
T Consensus       162 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~  224 (280)
T PLN02253        162 GL---------------GPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALALAHLPEDERTEDALAGFR  224 (280)
T ss_pred             CC---------------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccccccccccchhhhhhhhH
Confidence            33               256899999999999999999999999  9999999999999875321    000111    1


Q ss_pred             HHH----h-hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          249 GLL----G-KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       249 ~~~----~-~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...    + ..+..+|+|+|++++|++ ++...+++|+.+. ++|.
T Consensus       225 ~~~~~~~~l~~~~~~~~dva~~~~~l~-s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        225 AFAGKNANLKGVELTVDDVANAVLFLA-SDEARYISGLNLMIDGGF  269 (280)
T ss_pred             HHhhcCCCCcCCCCCHHHHHHHHHhhc-CcccccccCcEEEECCch
Confidence            111    1 123468999999999998 6888899999877 4443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-37  Score=275.23  Aligned_cols=240  Identities=17%  Similarity=0.199  Sum_probs=182.1

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------hCCCC-----ceEEEEcC
Q 020927           24 GIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK--------EIPNA-----KVQAMELD   88 (319)
Q Consensus        24 ~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~--------~~~~~-----~v~~~~~D   88 (319)
                      .++++||++|||||+  +|||+++|+.|+++|++|++.++.+ .+....+....        ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            577899999999996  9999999999999999999987642 11111111000        00011     11112233


Q ss_pred             CCCH------------------HHHHHHHHHHHhcCCCccEEEEccccCC----CCcccCcccccchhhhhhhHHHHHHH
Q 020927           89 LSSL------------------ASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTN  146 (319)
Q Consensus        89 l~~~------------------~~v~~~~~~i~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~  146 (319)
                      +++.                  .+++++++++.+++|++|+||||||+..    +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3333                  3689999999999999999999998642    34467889999999999999999999


Q ss_pred             HHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccc-cchhhHHHHHHHHHHHHHHhcc-CCCcEE
Q 020927          147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS-AYGQSKLANVLHTSELARRLKE-DGVDIT  224 (319)
Q Consensus       147 ~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~-~g~~i~  224 (319)
                      +++|+|++       .|+||+++|..+..+.|.               +. .|++||+|+.+|+++|+.|+++ +|  ||
T Consensus       162 a~~p~m~~-------~G~ii~iss~~~~~~~p~---------------~~~~Y~asKaAl~~lt~~la~el~~~~g--Ir  217 (299)
T PRK06300        162 HFGPIMNP-------GGSTISLTYLASMRAVPG---------------YGGGMSSAKAALESDTKVLAWEAGRRWG--IR  217 (299)
T ss_pred             HHHHHhhc-------CCeEEEEeehhhcCcCCC---------------ccHHHHHHHHHHHHHHHHHHHHhCCCCC--eE
Confidence            99999964       479999999888776553               33 7999999999999999999987 48  99


Q ss_pred             EEEeeCCcccCCcccCchh----HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          225 ANSVHPGAITTNLFRNISF----FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       225 v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ||+|+||+++|++......    ........+..+..+|+++++.++|++ ++...+++|+.+. ++|..
T Consensus       218 Vn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~-s~~~~~itG~~i~vdGG~~  286 (299)
T PRK06300        218 VNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLV-SPLASAITGETLYVDHGAN  286 (299)
T ss_pred             EEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCCCCCEEEECCCcc
Confidence            9999999999998654321    111222344456678999999999999 6888999999887 55543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=265.97  Aligned_cols=236  Identities=23%  Similarity=0.284  Sum_probs=196.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||+++++.|+++|++|++++|+++..++..+++.... +.++.++.+|+++++++.++++.   
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH---
Confidence            56789999999999999999999999999999999999988887777776543 45788999999999999888764   


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                       ++++|++|||+|+...  ..+.+.++|+.++++|+.+++.+++.++|.|.+.     +.++||+++|..+..+.+    
T Consensus        79 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~iss~~~~~~~~----  148 (259)
T PRK06125         79 -AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-----GSGVIVNVIGAAGENPDA----  148 (259)
T ss_pred             -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEecCccccCCCC----
Confidence             4789999999997543  3467789999999999999999999999999764     367999999988776433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------hhHHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------SFFSGLVGL  250 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~  250 (319)
                                 .+..|+++|+++++|+++++.++.+.|  |+||+|+||+++|++....            .....+...
T Consensus       149 -----------~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T PRK06125        149 -----------DYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG  215 (259)
T ss_pred             -----------CchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc
Confidence                       367899999999999999999999999  9999999999999964321            011122223


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+..++.+|+|+|++++||+ ++...+++|+.+..+|.
T Consensus       216 ~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        216 LPLGRPATPEEVADLVAFLA-SPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             CCcCCCcCHHHHHHHHHHHc-CchhccccCceEEecCC
Confidence            34456679999999999998 68889999998884443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.4e-36  Score=265.66  Aligned_cols=234  Identities=21%  Similarity=0.228  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||+++||||++|||+++|++|+++|++|++++++.+...   +.+...    ++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999998876543222   222221    478899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++++++|+.+++.+++.++|.|.+.     +.++||++||..+..+.     
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~-----  145 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-----KNGAIVNIASNAGIGTA-----  145 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHhCCCC-----
Confidence            99999999999998543  3356778899999999999999999999999753     36899999998877421     


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------hHHHHHHHHhhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------FFSGLVGLLGKYV  255 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~  255 (319)
                               ..+...|++||+|+++|+++++.++.+.|  |+||+|+||+++|++.....       ....+....+..+
T Consensus       146 ---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T PRK06463        146 ---------AEGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT  214 (255)
T ss_pred             ---------CCCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCC
Confidence                     12357899999999999999999999999  99999999999999864321       1111222334455


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.+|+++|+.+++++ ++...+++|+.+..+|
T Consensus       215 ~~~~~~va~~~~~l~-s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        215 TGKPEDIANIVLFLA-SDDARYITGQVIVADG  245 (255)
T ss_pred             CcCHHHHHHHHHHHc-ChhhcCCCCCEEEECC
Confidence            679999999999998 6778899999887433

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=264.51  Aligned_cols=240  Identities=22%  Similarity=0.268  Sum_probs=202.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+...  +.++.++++|++++++++++++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQI   81 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999998888777776544  557999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||||+...  ..+.+.+.+++++++|+.+++.+++.++|+|.+.     ..++||++||..+..+.+  
T Consensus        82 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  154 (265)
T PRK07097         82 EKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-----GHGKIINICSMMSELGRE--  154 (265)
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCccccCCCC--
Confidence            9999999999999998654  3356778999999999999999999999999764     368999999988776433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----------hHHHHHHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----------FFSGLVGL  250 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~  250 (319)
                                   ++..|+++|++++.++++++.++.+.|  |+||+|+||+++|++.....          +.......
T Consensus       155 -------------~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (265)
T PRK07097        155 -------------TVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAK  219 (265)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhhhhhccccccchhHHHHHHhc
Confidence                         468899999999999999999999999  99999999999999764431          11111222


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..++.+|+|+|+.+++++ ++....++|+.+. ++|
T Consensus       220 ~~~~~~~~~~dva~~~~~l~-~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        220 TPAARWGDPEDLAGPAVFLA-SDASNFVNGHILYVDGG  256 (265)
T ss_pred             CCccCCcCHHHHHHHHHHHh-CcccCCCCCCEEEECCC
Confidence            23455678999999999999 5777889999887 444

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7.2e-36  Score=264.54  Aligned_cols=232  Identities=25%  Similarity=0.306  Sum_probs=192.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHH----CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLAL----RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|||||++|||+++|++|++    .|++|++++|+++.+++..+++....++.++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            699999999999999999997    7999999999999988888888765456679999999999999999999998876


Q ss_pred             CC----ccEEEEccccCCCC---cc--cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          107 LP----LNILINNAGIMATP---FM--LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       107 ~~----id~lv~nag~~~~~---~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.    .|+||||||+....   ..  .+.+.|++.+++|+.+++.+++.++|.|.++.   +..++||++||.++..+.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~~~  158 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQPF  158 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCCCC
Confidence            64    36999999975431   11  23578999999999999999999999997531   125799999999888754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhHHHHHHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFFSGLVGL  250 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~  250 (319)
                      |               ++..|++||+++++|+++|+.++++.|  |+||+|+||+++|++....       .....+...
T Consensus       159 ~---------------~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  221 (256)
T TIGR01500       159 K---------------GWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQEL  221 (256)
T ss_pred             C---------------CchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHH
Confidence            4               367899999999999999999999988  9999999999999986532       111223344


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      .+..++.+|+|+|+.+++++ + ..+++||+.++
T Consensus       222 ~~~~~~~~p~eva~~~~~l~-~-~~~~~~G~~~~  253 (256)
T TIGR01500       222 KAKGKLVDPKVSAQKLLSLL-E-KDKFKSGAHVD  253 (256)
T ss_pred             HhcCCCCCHHHHHHHHHHHH-h-cCCcCCcceee
Confidence            55667789999999999999 3 57899999876

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-36  Score=267.36  Aligned_cols=240  Identities=23%  Similarity=0.250  Sum_probs=189.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++||||| +|||+++|++|+ +|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            789999998 699999999996 8999999999988887777776543  557889999999999999999988 46789


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC---------C
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP---------E  179 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p---------~  179 (319)
                      +|+||||||+..     ..++|++++++|+.+++.+++.++|.|.+       .+++|+++|.++..+..         .
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccc
Confidence            999999999742     23578999999999999999999999964       46789999988765320         0


Q ss_pred             CCcCcCCCCCC---C---CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------hhHHHH
Q 020927          180 GIRFDRINDQS---G---YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------SFFSGL  247 (319)
Q Consensus       180 ~~~~~~~~~~~---~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------~~~~~~  247 (319)
                      ..+++++....   .   ..++..|++||+|+..+++.++.+++++|  |+||+|+||+++|++....      .....+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~~~~~~~~~~~~~~~  222 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQDELNGPRGDGYRNM  222 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccchhhhcCCchHHHHHH
Confidence            00111111000   0   02467899999999999999999999999  9999999999999986431      111223


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ....+..++.+|+|+|++++||+ ++.+.+++|+.+. |+|.
T Consensus       223 ~~~~p~~r~~~peeia~~~~fL~-s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        223 FAKSPAGRPGTPDEIAALAEFLM-GPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             hhhCCcccCCCHHHHHHHHHHHc-CcccCcccCceEEEcCCe
Confidence            33445667789999999999999 7889999999777 5443

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=261.47  Aligned_cols=237  Identities=26%  Similarity=0.280  Sum_probs=197.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+..+ ....+    .+.++.++.+|+++++++.++++++
T Consensus         9 ~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841          9 LAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQL----LGGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             hhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHh----hCCceEEEEecCCCHHHHHHHHHHH
Confidence            336789999999999999999999999999999999999876422 22222    1446779999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|++|||+|....  ..+.+.+++++++++|+.+++.+++.++|.|.+.     ..++||++||..+..+.|  
T Consensus        84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~--  156 (255)
T PRK06841         84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-----GGGKIVNLASQAGVVALE--  156 (255)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-----CCceEEEEcchhhccCCC--
Confidence            9989999999999998643  2345678899999999999999999999999764     367999999998876544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~  257 (319)
                                   .+..|+++|++++.++++++.+++++|  |+||+|+||+++|++....   .....+....+..++.
T Consensus       157 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK06841        157 -------------RHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFA  221 (255)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCc
Confidence                         367899999999999999999999999  9999999999999986532   1112233344566678


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+++|+.+++++ ++...+++|+.+..+|
T Consensus       222 ~~~~va~~~~~l~-~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        222 YPEEIAAAALFLA-SDAAAMITGENLVIDG  250 (255)
T ss_pred             CHHHHHHHHHHHc-CccccCccCCEEEECC
Confidence            9999999999999 6888999999888443

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-35  Score=262.24  Aligned_cols=240  Identities=25%  Similarity=0.278  Sum_probs=198.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|++|||||++|||++++++|+++|++|+++.+ +.+..+...+++...  +.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999988864 666666666666554  5678999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|++|||+|....  ..+.+.+++++.+++|+.+++.++++++++|.++    ++.++||++||..+..+.+      
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~------  148 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQ----GQGGRIINITSVHEHTPLP------  148 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCeEEEEEeeccccCCCC------
Confidence            999999999998644  3356778999999999999999999999999753    1357999999988776533      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~v  262 (319)
                               ++..|+++|++++.++++++.++.++|  |+||+|+||+++|++.....  .........+..+..+|+|+
T Consensus       149 ---------~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  217 (256)
T PRK12743        149 ---------GASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEI  217 (256)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHH
Confidence                     468999999999999999999999999  99999999999999865331  11112223344556799999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCccccc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNVAQA  291 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~~~~  291 (319)
                      ++.+++++ ++...+++|+++. ++|...+
T Consensus       218 a~~~~~l~-~~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        218 ASLVAWLC-SEGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             HHHHHHHh-CccccCcCCcEEEECCCcccc
Confidence            99999999 6888899999888 5554433

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=260.76  Aligned_cols=236  Identities=20%  Similarity=0.195  Sum_probs=194.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ||++|||||++|||+++++.|+++|++|++++|+.+.+++..+.+...  +.++.++.+|++++++++++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988877777666543  457889999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||+|....  ..+.+.++|++++++|+.++++++++++++|.+.    ...++||++||..+..+.+        
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~--------  146 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEK----GIKGNIINMVATYAWDAGP--------  146 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc----CCCEEEEEEcChhhccCCC--------
Confidence            9999999996432  3356778899999999999999999999998653    1358999999998876433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCc-ccCc----hhHHHHHHHHhhhhcCCHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHPGAITTNL-FRNI----SFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~PG~v~t~~-~~~~----~~~~~~~~~~~~~~~~~~~  260 (319)
                             .+..|++||+++++|++.|+.++.+ .|  |+||+|+||+++|.. ....    .....+.+..+..++.+|+
T Consensus       147 -------~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK07677        147 -------GVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPE  217 (252)
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHH
Confidence                   3578999999999999999999975 58  999999999999643 2211    1112222233455678999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++++.+++++ ++...+++|+.+. ++|.
T Consensus       218 ~va~~~~~l~-~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        218 EIAGLAYFLL-SDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHHHHHc-CccccccCCCEEEECCCe
Confidence            9999999998 5777899999877 4443

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-35  Score=262.42  Aligned_cols=234  Identities=23%  Similarity=0.225  Sum_probs=190.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|++. .++..+++...  +.++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999853 34444555433  45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|+||||||...   +..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++||++||..+...     
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~-----  150 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-----GGGAIVNVSSIATRGI-----  150 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEcCccccCC-----
Confidence            9999999999999642   23456778899999999999999999999999764     3579999999876421     


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----------hhHHH----
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----------SFFSG----  246 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----------~~~~~----  246 (319)
                                  ....|++||++++.|++.++.+++++|  |+||+|+||++.|++....           .....    
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK12823        151 ------------NRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQ  216 (260)
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcchhhHHhhccccccccccHHHHHHH
Confidence                        235799999999999999999999999  9999999999999863210           00111    


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .....+..++.+|+|+|++++|++ ++...+++|+.+..+
T Consensus       217 ~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~g~~~~v~  255 (260)
T PRK12823        217 TLDSSLMKRYGTIDEQVAAILFLA-SDEASYITGTVLPVG  255 (260)
T ss_pred             HhccCCcccCCCHHHHHHHHHHHc-CcccccccCcEEeec
Confidence            112234455678999999999999 677889999977743

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=261.75  Aligned_cols=236  Identities=22%  Similarity=0.279  Sum_probs=197.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.+.+|++|||||++|||++++++|+++|++|++++|+.+..++..+.+     +.++.++.+|++++++++++++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777665544     34688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||....  ..+.+.+++++.+++|+.+++.+++++++.|.++.    ..++||++||..+..+.|    
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~----  148 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG----RGGKIINMASQAGRRGEA----  148 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC----CCcEEEEeCCHHhCCCCC----
Confidence            99999999999997543  33566789999999999999999999999987531    257999999988776433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----------h---HHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----------F---FSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----------~---~~~~~~  249 (319)
                                 ++..|++||++++.+++.++.++.++|  |+||+|+||+++|++.....          .   ...+..
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK07067        149 -----------LVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGE  215 (257)
T ss_pred             -----------CCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhh
Confidence                       468999999999999999999999999  99999999999998754321          0   011112


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..+..++.+|+|+|+++++++ ++...+++|+.+..+|
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~-s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        216 AVPLGRMGVPDDLTGMALFLA-SADADYIVAQTYNVDG  252 (257)
T ss_pred             cCCCCCccCHHHHHHHHHHHh-CcccccccCcEEeecC
Confidence            234556779999999999999 6778899999887444

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=262.57  Aligned_cols=242  Identities=24%  Similarity=0.297  Sum_probs=196.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+ ..+..+.+...  +.++.++.+|++++++++++++++.+
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999875 33444444432  55788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p~~~  181 (319)
                      .++++|+||||||+...  ..+.+.+.+++.+++|+.+++.+++.+++.+.+.     ..++||++||..+. .+.|   
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~---  150 (263)
T PRK08226         79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-----KDGRIVMMSSVTGDMVADP---  150 (263)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhcccCCC---
Confidence            99999999999997543  3355678899999999999999999999998653     35799999998764 3222   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----------hHHHHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----------FFSGLVGLL  251 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~  251 (319)
                                  ++..|+.+|+++++++++++.++.++|  |+||+|+||+++|++.....          ....+....
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (263)
T PRK08226        151 ------------GETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI  216 (263)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccC
Confidence                        367899999999999999999999888  99999999999999865321          111222223


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccccC
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQAS  292 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~~  292 (319)
                      +..++.+|+|+|+.++||+ ++.+.+++|+.+..+|....+
T Consensus       217 p~~~~~~~~~va~~~~~l~-~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        217 PLRRLADPLEVGELAAFLA-SDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CCCCCCCHHHHHHHHHHHc-CchhcCCcCceEeECCCcccC
Confidence            4455679999999999999 688889999988844444333

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=260.81  Aligned_cols=240  Identities=25%  Similarity=0.297  Sum_probs=203.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+++++|+++||||+++||++++++|+++|++|++++|+++.++...+++...  +.++.++.+|+++++++.++++++
T Consensus         5 ~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   82 (256)
T PRK06124          5 QRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARI   82 (256)
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHH
Confidence            367789999999999999999999999999999999999988887777777554  557899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ...++++|++|||+|....  ..+.+.++|++.+++|+.+++.+++.+++.|.+.     ..+++|++||..+..+.|  
T Consensus        83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~--  155 (256)
T PRK06124         83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-----GYGRIIAITSIAGQVARA--  155 (256)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEeechhccCCC--
Confidence            9999999999999997644  3356678899999999999999999999999764     368999999998877544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (319)
                                   ++..|+++|++++.+++.++.++.+.|  |++|+|+||+++|++....    .....+....+..++
T Consensus       156 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T PRK06124        156 -------------GDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRW  220 (256)
T ss_pred             -------------CccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCC
Confidence                         368899999999999999999999888  9999999999999975432    111222233344566


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+|+++++++++++ ++...+++|+++. ++|
T Consensus       221 ~~~~~~a~~~~~l~-~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        221 GRPEEIAGAAVFLA-SPAASYVNGHVLAVDGG  251 (256)
T ss_pred             CCHHHHHHHHHHHc-CcccCCcCCCEEEECCC
Confidence            78999999999999 6788899999887 444

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=261.90  Aligned_cols=235  Identities=20%  Similarity=0.194  Sum_probs=194.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +|++++|++|||||++|||++++++|+++|++|++++|+.+.     .   .  .+.++.++.+|++++++++++++++.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~---~--~~~~~~~~~~D~~~~~~~~~~~~~~~   70 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T---V--DGRPAEFHAADVRDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h---h--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998754     0   1  14578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.+.+.|.++    ...++||++||..+..+.|   
T Consensus        71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~---  143 (252)
T PRK07856         71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ----PGGGSIVNIGSVSGRRPSP---  143 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCcEEEEEcccccCCCCC---
Confidence            999999999999997543  2346678899999999999999999999999753    1357999999998887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                  ++..|+++|++++.|++.++.++++.   |++|+|+||+++|++....    .....+....+..++.
T Consensus       144 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (252)
T PRK07856        144 ------------GTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLA  208 (252)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCc
Confidence                        36889999999999999999999764   9999999999999975432    1111222334556677


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCccccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSNVAQA  291 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~  291 (319)
                      +|+|+|+.+++|+ ++...+++|+.+..+|....
T Consensus       209 ~p~~va~~~~~L~-~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        209 TPADIAWACLFLA-SDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             CHHHHHHHHHHHc-CcccCCccCCEEEECCCcch
Confidence            9999999999999 68888999999885554443

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=271.71  Aligned_cols=228  Identities=25%  Similarity=0.264  Sum_probs=191.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999998888887654  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||||+...  ..+.+.+++++.+++|+.+++.+++.++|+|+++     ..++||+++|..+..+.|.  
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-----~~g~iV~isS~~~~~~~p~--  152 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-----GHGIFINMISLGGFAAQPY--  152 (330)
T ss_pred             HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhcCCCCC--
Confidence            888999999999997544  3456778899999999999999999999999874     3689999999998876553  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED-GVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   +..|++||+++.+|+++|+.|+.+. |  |+|++|+||+++|++......... ....+...+.+|+
T Consensus       153 -------------~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe  216 (330)
T PRK06139        153 -------------AAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRHGANYTG-RRLTPPPPVYDPR  216 (330)
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCccccccccccc-ccccCCCCCCCHH
Confidence                         6789999999999999999999874 7  999999999999998654311110 0011122356899


Q ss_pred             HHHHHHHHHhcCCCcc
Q 020927          261 QGAATTCYVALHPHVK  276 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~  276 (319)
                      ++|+.+++++.++...
T Consensus       217 ~vA~~il~~~~~~~~~  232 (330)
T PRK06139        217 RVAKAVVRLADRPRAT  232 (330)
T ss_pred             HHHHHHHHHHhCCCCE
Confidence            9999999999655443

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=257.92  Aligned_cols=220  Identities=18%  Similarity=0.157  Sum_probs=184.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++||+++||||++|||++++++|+++|++|++++|+++.++++.+.+...  +.++..+.+|++++++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999998888877654  45688899999999999999999999


Q ss_pred             cCC-CccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGL-PLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~-~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +++ ++|+||||||....   ..+.+.++|.+.+++|+.+++.+++.++|+|.++    +++|+||++||..+..     
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~-----  149 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR----NKKGVIVNVISHDDHQ-----  149 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCceEEEEecCCCCC-----
Confidence            988 99999999986432   2345667889999999999999999999999764    1368999999965432     


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   ++..|++||+++.+|+++|+.|+++.|  |+||+|+||+++|+.... ..  .+...        -+
T Consensus       150 -------------~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~~~~-~~--~~~~~--------~~  203 (227)
T PRK08862        150 -------------DLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANGELD-AV--HWAEI--------QD  203 (227)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCCccC-HH--HHHHH--------HH
Confidence                         257899999999999999999999999  999999999999984221 11  11111        18


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +++.+..||+.   ..++||+.+.
T Consensus       204 ~~~~~~~~l~~---~~~~tg~~~~  224 (227)
T PRK08862        204 ELIRNTEYIVA---NEYFSGRVVE  224 (227)
T ss_pred             HHHhheeEEEe---cccccceEEe
Confidence            99999999993   5689998664

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.1e-35  Score=260.22  Aligned_cols=238  Identities=26%  Similarity=0.225  Sum_probs=195.5

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      +.+.++++||++|||||++|||+++|++|+++|++|++++|+++..++..+.+     +.++.++++|+++.+++.++++
T Consensus         2 ~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~   76 (255)
T PRK05717          2 SEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVA   76 (255)
T ss_pred             CCCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHH
Confidence            45678899999999999999999999999999999999999887665544332     4578899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          101 EFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++.++++++|++|||||+..+    ..+.+.++|++.+++|+.+++.++++++|+|.+.      .++||++||..+..+
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~~  150 (255)
T PRK05717         77 EVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQS  150 (255)
T ss_pred             HHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcCC
Confidence            999999999999999998643    2245678899999999999999999999999753      579999999988875


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGK  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~  253 (319)
                      .|.               +..|+++|++++.+++.++.++.. +  |+||+|+||.++|++.....   .........+.
T Consensus       151 ~~~---------------~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~  212 (255)
T PRK05717        151 EPD---------------TEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPA  212 (255)
T ss_pred             CCC---------------CcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCccccccchHHHHHHhhcCCC
Confidence            443               678999999999999999999875 4  99999999999998754321   11111112344


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+..+|+++|..+++++ ++...+++|+.+..+|.
T Consensus       213 ~~~~~~~~va~~~~~l~-~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        213 GRVGTVEDVAAMVAWLL-SRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             CCCcCHHHHHHHHHHHc-CchhcCccCcEEEECCC
Confidence            56679999999999998 57778899997774443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=266.57  Aligned_cols=231  Identities=26%  Similarity=0.283  Sum_probs=192.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+++++|++|||||++|||++++++|+++|++|++++|++....           ..++.++.+|++++++++++++++
T Consensus         3 ~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~   71 (266)
T PRK06171          3 DWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEI   71 (266)
T ss_pred             ccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999875432           236888999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCCC-----------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          103 KSSGLPLNILINNAGIMATP-----------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      .+.++++|+||||||+....           .+.+.++|++++++|+.+++.++++++++|.++     +.++||++||.
T Consensus        72 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~  146 (266)
T PRK06171         72 IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-----HDGVIVNMSSE  146 (266)
T ss_pred             HHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-----CCcEEEEEccc
Confidence            99999999999999975321           235678899999999999999999999999764     36899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCcccCc---------
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT-TNLFRNI---------  241 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~-t~~~~~~---------  241 (319)
                      .+..+.+               ++..|+++|++++.|+++++.++++.|  |+||+|+||+++ |++....         
T Consensus       147 ~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~~~~~~~~~~~~  209 (266)
T PRK06171        147 AGLEGSE---------------GQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRTPEYEEALAYTR  209 (266)
T ss_pred             cccCCCC---------------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcChhhhhhhcccc
Confidence            8876543               367899999999999999999999999  999999999997 6653211         


Q ss_pred             -----hhHHHHHH--HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          242 -----SFFSGLVG--LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       242 -----~~~~~~~~--~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                           .....+..  ..+..++..|+|+|++++||+ ++.+.+++|+.+. |+|
T Consensus       210 ~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~-s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        210 GITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLL-SDRASYITGVTTNIAGG  262 (266)
T ss_pred             CCCHHHHHhhhcccccccCCCCCCHHHhhhheeeee-ccccccceeeEEEecCc
Confidence                 00111222  345567789999999999999 6888999999888 444

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-35  Score=257.92  Aligned_cols=235  Identities=22%  Similarity=0.252  Sum_probs=190.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |.+++|++|||||++|||+++++.|+++|++|+++.+ +.+..+.....+     +.++.++.+|+++++++.++++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999988765 554444433322     3578899999999999999999998


Q ss_pred             hcCCC-ccEEEEccccCC--------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          104 SSGLP-LNILINNAGIMA--------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       104 ~~~~~-id~lv~nag~~~--------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      +.+++ +|++|||||+..        +..+.+.+.+.+.+++|+.+++.+++.++|.|.+.     ..++||+++|..+.
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~  150 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-----GFGRIINIGTNLFQ  150 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-----CCeEEEEECCcccc
Confidence            88887 999999998642        12345678899999999999999999999999753     35899999997665


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHH
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLL  251 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~  251 (319)
                      .+               ..++..|++||++++.+++.++++++++|  |+||+|+||+++|+......   ....+....
T Consensus       151 ~~---------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~  213 (253)
T PRK08642        151 NP---------------VVPYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASAATPDEVFDLIAATT  213 (253)
T ss_pred             CC---------------CCCccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhccCCHHHHHHHHhcC
Confidence            43               22467899999999999999999999999  99999999999998654321   112233344


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +..++.+|+|+|+.++||+ ++...+++|+.+. ++|
T Consensus       214 ~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        214 PLRKVTTPQEFADAVLFFA-SPWARAVTGQNLVVDGG  249 (253)
T ss_pred             CcCCCCCHHHHHHHHHHHc-CchhcCccCCEEEeCCC
Confidence            5566789999999999999 5778899999877 444

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=266.71  Aligned_cols=234  Identities=23%  Similarity=0.251  Sum_probs=195.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +..+++||++|||||++|||+++++.|+++|++|++++|+.+.++++.+++..   +.++..+.+|++++++++++++++
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999888777666532   446777889999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||||+...  ..+.+.++|++++++|+.+++.+++.++|.|.+.      .|+||++||..+..+.|+ 
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~-  152 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFAAAPG-  152 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcCCCCC-
Confidence            9999999999999998543  3456778999999999999999999999999763      579999999998876543 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHH--hhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLL--GKY  254 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~--~~~  254 (319)
                                    +..|++||+++++|+++++.+++++|  |+||+++||+++|++.....    ....+...+  +..
T Consensus       153 --------------~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  216 (296)
T PRK05872        153 --------------MAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLR  216 (296)
T ss_pred             --------------chHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhccccchhHHHHHhhCCCccc
Confidence                          67899999999999999999999999  99999999999999876531    111122221  234


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYF  283 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~  283 (319)
                      +..+|+++|+.+++++ +.....++|..+
T Consensus       217 ~~~~~~~va~~i~~~~-~~~~~~i~~~~~  244 (296)
T PRK05872        217 RTTSVEKCAAAFVDGI-ERRARRVYAPRW  244 (296)
T ss_pred             CCCCHHHHHHHHHHHH-hcCCCEEEchHH
Confidence            5679999999999999 466677666644

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=259.97  Aligned_cols=233  Identities=22%  Similarity=0.268  Sum_probs=192.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+..+++||++|||||++|||++++++|+++|++|++++|+++..         .  ..++.++.+|+++++++++++++
T Consensus         2 ~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          2 SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L--PEGVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             CcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c--CCceeEEecCCCCHHHHHHHHHH
Confidence            344678999999999999999999999999999999999986531         0  34688999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          102 FKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.+.++++|++|||||....    ..+.+.++|++.+++|+.+++.+++.++|+|.+.     +.++||++||..+..+.
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~ii~isS~~~~~~~  145 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-----GSGVIIHVTSIQRRLPL  145 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEecccccCCC
Confidence            99999999999999996432    2346678899999999999999999999999864     35799999999887653


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---------HHHHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---------FSGLV  248 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~  248 (319)
                      +.              ++..|+++|++++.+++.++.+++++|  |+||+|+||+++|++......         .....
T Consensus       146 ~~--------------~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  209 (260)
T PRK06523        146 PE--------------STTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAK  209 (260)
T ss_pred             CC--------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHH
Confidence            31              367899999999999999999999999  999999999999998643210         01111


Q ss_pred             -------HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          249 -------GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       249 -------~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                             ...+..+..+|+|+|+.++|++ ++...+++|+.+..+|
T Consensus       210 ~~~~~~~~~~p~~~~~~~~~va~~~~~l~-s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        210 QIIMDSLGGIPLGRPAEPEEVAELIAFLA-SDRAASITGTEYVIDG  254 (260)
T ss_pred             HHHHHHhccCccCCCCCHHHHHHHHHHHh-CcccccccCceEEecC
Confidence                   1134455678999999999999 6888899999877443

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-35  Score=262.73  Aligned_cols=242  Identities=22%  Similarity=0.237  Sum_probs=196.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhCCCCceEEEEcCCCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-------CREVKKAIVKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++.
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~   78 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVA   78 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHH
Confidence            356889999999999999999999999999999999997643       34444455433  557899999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927           97 KFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ++++++.+.++++|+||||||....  ..+.+.+++++++++|+.+++.+++.++|.|.+.     ..++||+++|..+.
T Consensus        79 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~  153 (273)
T PRK08278         79 AAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-----ENPHILTLSPPLNL  153 (273)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-----CCCEEEEECCchhc
Confidence            9999999989999999999997543  3356678899999999999999999999999764     36799999998765


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccCchhHHHHHHHHhh
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      .+.             ...++..|++||++++.++++++.++.++|  |+||+|+|| +++|++.......     ..+.
T Consensus       154 ~~~-------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~~~~~-----~~~~  213 (273)
T PRK08278        154 DPK-------------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRNLLGG-----DEAM  213 (273)
T ss_pred             ccc-------------ccCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHhcccc-----cccc
Confidence            532             013468999999999999999999999988  999999999 6889865543111     1122


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccccCh
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASS  293 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~~~  293 (319)
                      ....+|+++|+.+++++ ++...+++|+.+.+.+......
T Consensus       214 ~~~~~p~~va~~~~~l~-~~~~~~~~G~~~~~~~~~~~~~  252 (273)
T PRK08278        214 RRSRTPEIMADAAYEIL-SRPAREFTGNFLIDEEVLREAG  252 (273)
T ss_pred             cccCCHHHHHHHHHHHh-cCccccceeEEEeccchhhccC
Confidence            34579999999999999 5777889999887666655443

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=256.34  Aligned_cols=244  Identities=27%  Similarity=0.380  Sum_probs=202.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++.++.+...+...  +.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888777766544  4568899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc---CCCCCeEEEeCCcccccCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE---SSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~---~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.++++|++|||+|+...  ..+.+.++|+.++++|+.+++.+++.++|.|.+....   ....++||+++|..+..+.|
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            889999999999997543  2345668899999999999999999999998765311   11247999999988776433


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHHHHHHhhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYV  255 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~  255 (319)
                                     ....|+++|++++.+++.++.++.+.|  |+|++|+||+++|++......   .......++..+
T Consensus       162 ---------------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T PRK06949        162 ---------------QIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKR  224 (258)
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCC
Confidence                           367899999999999999999999988  999999999999998654311   122333445567


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ...|+|+++.++||+ ++.+.+++|+.+. |+|
T Consensus       225 ~~~p~~~~~~~~~l~-~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        225 VGKPEDLDGLLLLLA-ADESQFINGAIISADDG  256 (258)
T ss_pred             CcCHHHHHHHHHHHh-ChhhcCCCCcEEEeCCC
Confidence            789999999999999 6888999999887 444

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-35  Score=257.72  Aligned_cols=236  Identities=21%  Similarity=0.249  Sum_probs=197.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+++|++|||||++|||++++++|+++|++|++++|+++..++..+++...  +.++.++.+|++++++++++++++.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998887777776554  557899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|++|||||...+   ..+.+.+++++.+++|+.+++.+++.+++.|.+.      +++||++||..+..+.|    
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~~~----  149 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRHSQP----  149 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhccCCC----
Confidence            9999999999997543   2356678999999999999999999999999763      57999999988876533    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~  249 (319)
                                 ++..|+++|++++.++++++.++++.+  |++|+|+||++.|++....             .....+..
T Consensus       150 -----------~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T PRK07890        150 -----------KYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA  216 (258)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh
Confidence                       468899999999999999999999988  9999999999999875421             01111222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+...+.+|+|+++++++++ ++...+++|+.+. +.|
T Consensus       217 ~~~~~~~~~~~dva~a~~~l~-~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        217 NSDLKRLPTDDEVASAVLFLA-SDLARAITGQTLDVNCG  254 (258)
T ss_pred             cCCccccCCHHHHHHHHHHHc-CHhhhCccCcEEEeCCc
Confidence            234455678999999999999 5666789999876 444

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-35  Score=257.50  Aligned_cols=238  Identities=23%  Similarity=0.280  Sum_probs=195.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++|+||++|||||++|||++++++|+++|++|++++|+++.. +..+++...  +.++.++.+|+++++++.++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999988766 555666544  5578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +.++++|++|||||.... ..+.+.++|+..+++|+.+++.+.+.++|.+.+.      .++||++||..+..+.+    
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~~~----  148 (258)
T PRK08628         79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS------RGAIVNISSKTALTGQG----  148 (258)
T ss_pred             HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc------CcEEEEECCHHhccCCC----
Confidence            999999999999997543 2233348899999999999999999999998653      57999999998886433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHH----HHHHHHhh-
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFS----GLVGLLGK-  253 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~----~~~~~~~~-  253 (319)
                                 ++..|++||++++.+++.++.++.++|  |+||+|+||.++|++....    ....    ......+. 
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK08628        149 -----------GTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG  215 (258)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc
Confidence                       468999999999999999999999888  9999999999999975432    1011    11111222 


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+.+|+++|+.+++++ ++....++|+++. ++|.
T Consensus       216 ~~~~~~~dva~~~~~l~-~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        216 HRMTTAEEIADTAVFLL-SERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             ccCCCHHHHHHHHHHHh-ChhhccccCceEEecCCc
Confidence            24678999999999999 5777889998777 4444

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=260.30  Aligned_cols=237  Identities=24%  Similarity=0.249  Sum_probs=195.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++|++|||||++|||.+++++|+++|++|++++|+.. ..+...+.+...  +.++.++.+|+++.+++.++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999753 344444444332  557889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+.++++|+||||||....   ..+.+.++|.+.+++|+.+++.+++++++.|..       .++||++||..++.+.+ 
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~~~~-  190 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYEGNE-  190 (290)
T ss_pred             HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccCCCC-
Confidence            9988999999999997533   335667889999999999999999999999854       46999999998887544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhc
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVI  256 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  256 (319)
                                    .+..|++||++++.++++++.++.++|  |+|++|+||++.|++.....   ....+....+...+
T Consensus       191 --------------~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T PRK06701        191 --------------TLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRP  254 (290)
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCC
Confidence                          357899999999999999999999989  99999999999999765421   11122223344556


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+|+|+|+++++++ ++....++|+.+. ++|
T Consensus       255 ~~~~dva~~~~~ll-~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        255 GQPEELAPAYVFLA-SPDSSYITGQMLHVNGG  285 (290)
T ss_pred             cCHHHHHHHHHHHc-CcccCCccCcEEEeCCC
Confidence            78999999999999 5777889999877 444

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1e-34  Score=253.92  Aligned_cols=228  Identities=19%  Similarity=0.170  Sum_probs=183.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+++...   +.+...    .+.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            689999999999999999999999999999999875432   223221    2678999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+..   ...++||++||..+..+.|        
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~---~~~g~iv~~ss~~~~~~~~--------  143 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG---HAASDIIHITDYVVEKGSD--------  143 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC---CCCceEEEEcchhhccCCC--------
Confidence            9999999997533  33456789999999999999999999999997641   1257999999988776433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                             ++..|++||+++++|++.++.++++ +  |+||+|+||++.|+...............+..+...|+|+++.+
T Consensus       144 -------~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  213 (236)
T PRK06483        144 -------KHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLV  213 (236)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHH
Confidence                   3678999999999999999999986 5  99999999999886432222222222233445567899999999


Q ss_pred             HHHhcCCCccCCCcccccCCc
Q 020927          267 CYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .||+ +  ..+++|+.+..+|
T Consensus       214 ~~l~-~--~~~~~G~~i~vdg  231 (236)
T PRK06483        214 DYLL-T--SCYVTGRSLPVDG  231 (236)
T ss_pred             HHHh-c--CCCcCCcEEEeCc
Confidence            9999 3  5789999887444

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=256.05  Aligned_cols=238  Identities=25%  Similarity=0.290  Sum_probs=193.5

Q ss_pred             CCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           25 IDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRN-----------MAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        25 ~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      |++++|++|||||++  |||.+++++|+++|++|++++|+           ........+.+...  +.+++++.+|+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            567899999999994  99999999999999999999987           22222233333322  5579999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      ++++.++++++.+.++++|++|||||+...  ..+.+.+++++.+++|+.+++.+++.+++.|.+.     ..++||++|
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~s  153 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-----AGGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCeEEEEEC
Confidence            999999999999999999999999997543  3345678899999999999999999999998653     367999999


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG  249 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~  249 (319)
                      |..+..+.+               ++..|+++|++++.+++.++.++...|  |+|++|+||+++|++.... ....+..
T Consensus       154 s~~~~~~~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~~~-~~~~~~~  215 (256)
T PRK12748        154 SGQSLGPMP---------------DELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWITEE-LKHHLVP  215 (256)
T ss_pred             CccccCCCC---------------CchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCChh-HHHhhhc
Confidence            988776543               367899999999999999999999888  9999999999999875432 1122222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+..+..+|+++|+.++|++ ++...+++|+++. ++|.
T Consensus       216 ~~~~~~~~~~~~~a~~~~~l~-~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        216 KFPQGRVGEPVDAARLIAFLV-SEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-CcccccccCCEEEecCCc
Confidence            334455678999999999998 6878899999887 5553

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=263.06  Aligned_cols=244  Identities=28%  Similarity=0.297  Sum_probs=195.2

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ..+.++++||++|||||++|||+++|++|+++|++|++++++ .+..+...+++...  +.++.++.+|+++++++.+++
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~   81 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELV   81 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHH
Confidence            345578999999999999999999999999999999999875 44566666766554  568899999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc--CCCCCeEEEeCCccccc
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE--SSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~--~~~~~~ii~isS~~~~~  175 (319)
                      +++.+ ++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++++|.+....  ....|+||++||..+..
T Consensus        82 ~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         82 ATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            99988 9999999999998654  2356778899999999999999999999999753211  11247999999998876


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHhhh
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLGKY  254 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~  254 (319)
                      +.+               ++..|+++|+++++|++.++.++.++|  |+||+|+||. .|+|.... .......  ....
T Consensus       161 ~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg~-~t~~~~~~~~~~~~~~--~~~~  220 (306)
T PRK07792        161 GPV---------------GQANYGAAKAGITALTLSAARALGRYG--VRANAICPRA-RTAMTADVFGDAPDVE--AGGI  220 (306)
T ss_pred             CCC---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCCC-CCchhhhhccccchhh--hhcc
Confidence            543               367899999999999999999999999  9999999994 88875432 1001000  1111


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+|++++..++||+ ++...+++|+++. ++|.
T Consensus       221 ~~~~pe~va~~v~~L~-s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        221 DPLSPEHVVPLVQFLA-SPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             CCCCHHHHHHHHHHHc-CccccCCCCCEEEEcCCe
Confidence            2247999999999999 6777889999877 4443

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=257.14  Aligned_cols=240  Identities=18%  Similarity=0.215  Sum_probs=197.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++++++|++|||||++|||.+++++|+++|++|++++|+.+.++...+.+...  +.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence            457889999999999999999999999999999999999988877766666554  446789999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|++|||||....  ..+.+.+++.+.+++|+.+++.+++.++|.|.+.      .++||++||..+..+.|  
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------~g~iv~iss~~~~~~~~--  152 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP------GASIIQISAPQAFVPMP--  152 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCEEEEECChhhccCCC--
Confidence            9889999999999986533  2345678899999999999999999999998753      57999999988776433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCcccCc----hhHHHHHHHHhhhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT-TNLFRNI----SFFSGLVGLLGKYV  255 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~-t~~~~~~----~~~~~~~~~~~~~~  255 (319)
                                   ++..|+++|++++.|++.++.++..+|  |+|++|+||.++ |+.....    .....+....+..+
T Consensus       153 -------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~  217 (264)
T PRK07576        153 -------------MQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKR  217 (264)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCC
Confidence                         467899999999999999999999988  999999999997 5533221    11111222334455


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+|+++|+.+++++ ++...+++|+++. ++|.
T Consensus       218 ~~~~~dva~~~~~l~-~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        218 NGTKQDIANAALFLA-SDMASYITGVVLPVDGGW  250 (264)
T ss_pred             CCCHHHHHHHHHHHc-ChhhcCccCCEEEECCCc
Confidence            678999999999999 5777889999888 4443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-36  Score=239.09  Aligned_cols=233  Identities=24%  Similarity=0.292  Sum_probs=199.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++.|+.+++||++-|||+++++.|++.|++|+.+.|++..+..+.++.     ...++-+..|++..+.+.+++..   
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~~---   74 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLVP---   74 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhcc---
Confidence            4688999999999999999999999999999999999998887766653     44588999999998777666553   


Q ss_pred             cCCCccEEEEccccCC--CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMA--TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~--~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                       .+.+|.||||||+..  ++.+.+.+.++..|++|+.+.+++.|.+...+...    +.+|.||++||.++..+..    
T Consensus        75 -v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R----~~~GaIVNvSSqas~R~~~----  145 (245)
T KOG1207|consen   75 -VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR----QIKGAIVNVSSQASIRPLD----  145 (245)
T ss_pred             -cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc----cCCceEEEecchhcccccC----
Confidence             458999999999853  45688999999999999999999999977766544    3578999999999988633    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  258 (319)
                                 .-..|+++|+|++++++.|+.|+++++  ||||+|.|-.+.|+|.+..    .....+...+|..++.+
T Consensus       146 -----------nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaE  212 (245)
T KOG1207|consen  146 -----------NHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAE  212 (245)
T ss_pred             -----------CceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccCCchhccchhhhCchhhhhH
Confidence                       468999999999999999999999999  9999999999999997654    23344667788888999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+++.++++||+ |+.++..+|..+. ++|+
T Consensus       213 V~eVVnA~lfLL-Sd~ssmttGstlpveGGf  242 (245)
T KOG1207|consen  213 VDEVVNAVLFLL-SDNSSMTTGSTLPVEGGF  242 (245)
T ss_pred             HHHHHhhheeee-ecCcCcccCceeeecCCc
Confidence            999999999999 7999999999887 5554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.4e-35  Score=246.08  Aligned_cols=235  Identities=26%  Similarity=0.311  Sum_probs=199.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||.+++||+.||||++++++|+++|.++.+...+.+. -+...++.+..|...+.|++||+++..+++++++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            57889999999999999999999999999976666655555 34566777888899999999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .+|.+|++||+||+.      +..+|++++++|+.|..+-....+|+|.+.  ..+++|-||++||..+..|.|-     
T Consensus        80 ~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~--~gG~GGiIvNmsSv~GL~P~p~-----  146 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKK--QGGKGGIIVNMSSVAGLDPMPV-----  146 (261)
T ss_pred             HhCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhh--cCCCCcEEEEeccccccCcccc-----
Confidence            999999999999985      356799999999999999999999999875  2346889999999999997664     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCcccCCcccCc-------hhHHHHHHHHhhhh
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARR--LKEDGVDITANSVHPGAITTNLFRNI-------SFFSGLVGLLGKYV  255 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~  255 (319)
                                .+.|++||+++.+|+|+|+..  |.+.|  |++++||||+++|.+..++       ...+.+.+.+.+..
T Consensus       147 ----------~pVY~AsKaGVvgFTRSla~~ayy~~sG--V~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~  214 (261)
T KOG4169|consen  147 ----------FPVYAASKAGVVGFTRSLADLAYYQRSG--VRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP  214 (261)
T ss_pred             ----------chhhhhcccceeeeehhhhhhhhHhhcC--EEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc
Confidence                      789999999999999998854  56678  9999999999999998776       12234555555666


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..+|++++..++.++.    ...||+.|. +.+..
T Consensus       215 ~q~~~~~a~~~v~aiE----~~~NGaiw~v~~g~l  245 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIE----YPKNGAIWKVDSGSL  245 (261)
T ss_pred             cCCHHHHHHHHHHHHh----hccCCcEEEEecCcE
Confidence            7899999999999994    256898766 55543

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=251.40  Aligned_cols=239  Identities=27%  Similarity=0.322  Sum_probs=202.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||+++||++++++|+++|++|++++|+++.++...+.+...  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888777777554  45789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||+|....  ..+.+.+.+++.+++|+.+++.+++.+.+.|.+.     +.+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  151 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-----GRGRIVNLASDTALWGAP----  151 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEECchhhccCCC----
Confidence            88999999999998654  2356678899999999999999999999998764     367999999988876544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  259 (319)
                                 ....|+++|++++.+++.++.++...+  |++++|+||.++|++.....   +...+....+..++.+|
T Consensus       152 -----------~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (250)
T PRK12939        152 -----------KLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVP  218 (250)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCH
Confidence                       357899999999999999999999888  99999999999999876542   22223333445566899


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +|+|+++++++ ++...+++|+.+.-+|.
T Consensus       219 ~dva~~~~~l~-~~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        219 DDVAGAVLFLL-SDAARFVTGQLLPVNGG  246 (250)
T ss_pred             HHHHHHHHHHh-CccccCccCcEEEECCC
Confidence            99999999999 56677899999885543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=254.39  Aligned_cols=240  Identities=25%  Similarity=0.261  Sum_probs=199.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988887777776543  45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||....  ..+.+.++++.++++|+.+++.+.+.+.++|.+.    ...++||++||..+..+.+    
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~----  155 (263)
T PRK07814         84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH----SGGGSVINISSTMGRLAGR----  155 (263)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh----cCCeEEEEEccccccCCCC----
Confidence            89999999999997543  3356678899999999999999999999999763    1367999999998876533    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  258 (319)
                                 ++..|+++|++++.++++++.++.+ +  |+||+|+||++.|++....    .....+....+..+..+
T Consensus       156 -----------~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (263)
T PRK07814        156 -----------GFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGD  221 (263)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcC
Confidence                       4678999999999999999999975 5  9999999999999876532    11112222234445578


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      |+|+|+.++|++ ++....++|+.+..++..
T Consensus       222 ~~~va~~~~~l~-~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        222 PEDIAAAAVYLA-SPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHHHHHHHHHHc-CccccCcCCCEEEECCCc
Confidence            999999999998 677788999987744433

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=253.23  Aligned_cols=232  Identities=25%  Similarity=0.319  Sum_probs=193.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|+++.+++..+++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987666555443     457889999999999999999999998


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|++|||||....  ..+.+.+.+++++++|+.+++.++++++|.|..       .+++|+++|..+..+.|     
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~~~~-----  145 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIGMP-----  145 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhccCCC-----
Confidence            9999999999997543  235677889999999999999999999999854       46899999988776544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHH----HHHHHHhhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFS----GLVGLLGKYV  255 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~----~~~~~~~~~~  255 (319)
                                ....|+.+|++++.++++++.++.+.|  |++++++||+++|++.....    ...    .+....+..+
T Consensus       146 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (249)
T PRK06500        146 ----------NSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGR  213 (249)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCC
Confidence                      367899999999999999999999888  99999999999999754321    111    1222233445


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +.+|+++|+++++++ ++...+++|+.+. ++|
T Consensus       214 ~~~~~~va~~~~~l~-~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        214 FGTPEEIAKAVLYLA-SDESAFIVGSEIIVDGG  245 (249)
T ss_pred             CcCHHHHHHHHHHHc-CccccCccCCeEEECCC
Confidence            679999999999998 5777899999877 444

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=2.9e-34  Score=252.87  Aligned_cols=211  Identities=16%  Similarity=0.173  Sum_probs=178.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.++++.+++.... ..++.++.+|++++++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 59999999999999998888886542 3358899999999999999999999989999


Q ss_pred             cEEEEccccCCCC--cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |++|||||+....  .+.+.+.+.+.+++|+.+++.+++.++|.|.++    ..+|+||++||.++..+.|         
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~---------  145 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ----TAPAAIVAFSSIAGWRARR---------  145 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc----CCCCEEEEEeccccccCCc---------
Confidence            9999999986442  234556677889999999999999999999753    1258999999999887544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            ++..|++||+|+++|+++|+.|++++|  |+||+|+||+++|++......         .....+|+++|+.++
T Consensus       146 ------~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~~~~---------~~~~~~pe~~a~~~~  208 (246)
T PRK05599        146 ------ANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTGMKP---------APMSVYPRDVAAAVV  208 (246)
T ss_pred             ------CCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcCCCC---------CCCCCCHHHHHHHHH
Confidence                  367899999999999999999999998  999999999999998654310         111358999999999


Q ss_pred             HHhcC
Q 020927          268 YVALH  272 (319)
Q Consensus       268 ~l~~s  272 (319)
                      +++..
T Consensus       209 ~~~~~  213 (246)
T PRK05599        209 SAITS  213 (246)
T ss_pred             HHHhc
Confidence            99953

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-34  Score=250.36  Aligned_cols=235  Identities=30%  Similarity=0.388  Sum_probs=194.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |.+++|+++||||++|||+++++.|+++|++|+++.|+ ++..++..+.+...  +.++.++.+|+++.++++++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999998888764 44455555555443  5679999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++++++|++|||||+...  ..+.+.+++++++++|+.+++.+++.+++.|..       .++||++||.++..+.|   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~---  148 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIALPLP---  148 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccCCCC---
Confidence            999999999999997543  234567789999999999999999999999854       57999999988776544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (319)
                                  ++..|+.+|++++.+++.++.++.+.|  |++++++||+++|++....   .....+....+..+..+
T Consensus       149 ------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
T PRK12937        149 ------------GYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGT  214 (245)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCC
Confidence                        367899999999999999999999988  9999999999999985432   12222333344556679


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+++++.++|++ ++...+++|+++.-+
T Consensus       215 ~~d~a~~~~~l~-~~~~~~~~g~~~~~~  241 (245)
T PRK12937        215 PEEIAAAVAFLA-GPDGAWVNGQVLRVN  241 (245)
T ss_pred             HHHHHHHHHHHc-CccccCccccEEEeC
Confidence            999999999999 677889999988743

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=6.6e-34  Score=251.26  Aligned_cols=235  Identities=24%  Similarity=0.296  Sum_probs=198.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+++||||+++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|+++++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988777777776544  5678999999999999999999999999999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||+|....  ..+.+.++|++++++|+.+++.+++.+++.|.+..    ..++||++||..+..+.|         
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~---------  145 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQG----HGGKIINAASIAGHEGNP---------  145 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEecchhhcCCCC---------
Confidence            999999998543  33567789999999999999999999999997641    247999999988887544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-------------HHHHHHHHhhh
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-------------FSGLVGLLGKY  254 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~  254 (319)
                            .+..|+++|++++.+++.++.++.+.+  |+|++|+||+++|++......             ...+....+..
T Consensus       146 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (254)
T TIGR02415       146 ------ILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALG  217 (254)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCC
Confidence                  367899999999999999999999988  999999999999998654311             11223334455


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      ++.+|+++++++++++ ++...+++|+++..+|.
T Consensus       218 ~~~~~~~~a~~~~~l~-~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       218 RPSEPEDVAGLVSFLA-SEDSDYITGQSILVDGG  250 (254)
T ss_pred             CCCCHHHHHHHHHhhc-ccccCCccCcEEEecCC
Confidence            6789999999999999 57788899998885543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.4e-34  Score=252.63  Aligned_cols=246  Identities=22%  Similarity=0.235  Sum_probs=196.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||++|||+++|+.|+++|++|++++|+++.+++..+.+....++..+.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888888877655445567788999999999999999999999


Q ss_pred             CCccEEEEccccCC-----CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          107 LPLNILINNAGIMA-----TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       107 ~~id~lv~nag~~~-----~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++|++|||||...     ...+.+.+.+...+++|+.+++.++++++|.|++.     ..++||++||..+....... 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~-  155 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-----GGGNLVNISSIYGVVAPKFE-  155 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-----CCceEEEEechhhhccccch-
Confidence            99999999998642     23356778899999999999999999999999764     35799999998776431100 


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (319)
                          ............|++||+++++++++++.++.+.|  |+||+++||.+.++...  .+...+....+...+.+|+|
T Consensus       156 ----~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~d  227 (256)
T PRK09186        156 ----IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQPE--AFLNAYKKCCNGKGMLDPDD  227 (256)
T ss_pred             ----hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCCCH--HHHHHHHhcCCccCCCCHHH
Confidence                00001111234699999999999999999999988  99999999999876522  12222222233455679999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+++++++ ++...+++|+++. ++|
T Consensus       228 va~~~~~l~-~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        228 ICGTLVFLL-SDQSKYITGQNIIVDDG  253 (256)
T ss_pred             hhhhHhhee-ccccccccCceEEecCC
Confidence            999999999 5778899999877 544

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-34  Score=252.25  Aligned_cols=238  Identities=21%  Similarity=0.229  Sum_probs=195.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||+++||++++++|+++|++|++++|+....+...+.+....+..++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998888877777766543357999999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||||....  ..+.+.+.|++.+++|+.+++.+++.+++.|.++.    ..++||++||..+..+.+        
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~~iv~~ss~~~~~~~~--------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDG----IQGRIIQINSKSGKVGSK--------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC----CCcEEEEecCcccccCCC--------
Confidence            9999999997644  23566788999999999999999999999997641    157999999988765433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccCc-h------------hHHHHHHHHh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRNI-S------------FFSGLVGLLG  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v-~t~~~~~~-~------------~~~~~~~~~~  252 (319)
                             ....|++||+|++.++++++.+++++|  |+||+|+||.+ .|++.... +            ....+....+
T Consensus       150 -------~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T PRK12384        150 -------HNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVP  220 (259)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCc
Confidence                   357899999999999999999999999  99999999974 67665422 0            0111122334


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..++..|+|+++++++++ +....+++|+.+. ++|.
T Consensus       221 ~~~~~~~~dv~~~~~~l~-~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        221 LKRGCDYQDVLNMLLFYA-SPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             ccCCCCHHHHHHHHHHHc-CcccccccCceEEEcCCE
Confidence            556679999999999998 5667789999776 5444

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=264.68  Aligned_cols=226  Identities=25%  Similarity=0.222  Sum_probs=190.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888877654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|++|||||+...  ..+.+.+++++.+++|+.+++.+++.++|+|.++     ..++||++||..+..+.|.   
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-----~~g~iV~isS~~~~~~~~~---  153 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-----DRGAIIQVGSALAYRSIPL---  153 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEeCChhhccCCCc---
Confidence            99999999999997533  3467789999999999999999999999999874     3689999999998876443   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                  +..|+++|+++++|+++++.|+..++.+|+|++|+||.++|++......... ....+...+.+|+++
T Consensus       154 ------------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe~v  220 (334)
T PRK07109        154 ------------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLP-VEPQPVPPIYQPEVV  220 (334)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhcc-ccccCCCCCCCHHHH
Confidence                        6789999999999999999999875445999999999999997543210000 001122345689999


Q ss_pred             HHHHHHHhcCC
Q 020927          263 AATTCYVALHP  273 (319)
Q Consensus       263 a~~i~~l~~s~  273 (319)
                      |+.+++++..+
T Consensus       221 A~~i~~~~~~~  231 (334)
T PRK07109        221 ADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHhCC
Confidence            99999999644

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.2e-34  Score=250.83  Aligned_cols=236  Identities=23%  Similarity=0.242  Sum_probs=194.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |++|++|||||++|||++++++|+++|++|++. +++....++..+++...  +.++..+.+|+++.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998875 45555555555555443  557888999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||....  ..+.+.++|++++++|+.+++.+++.+++.|.++     ..++||++||..+..+.+     
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~-----  148 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQKGQF-----  148 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEechhccCCCC-----
Confidence            9999999999998643  3356778999999999999999999999999764     357999999988776433     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~  261 (319)
                                ++..|+++|++++.+++.++.++...|  |++|+|+||++.|++.....  .........+..++.+|++
T Consensus       149 ----------~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (246)
T PRK12938        149 ----------GQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDE  216 (246)
T ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHH
Confidence                      467899999999999999999999988  99999999999999876431  1122222334455679999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++.++|++ ++...+++|+.+..+|
T Consensus       217 v~~~~~~l~-~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        217 IGSIVAWLA-SEESGFSTGADFSLNG  241 (246)
T ss_pred             HHHHHHHHc-CcccCCccCcEEEECC
Confidence            999999999 6777899999887444

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-34  Score=255.49  Aligned_cols=223  Identities=24%  Similarity=0.269  Sum_probs=187.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777644  557889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++|.|.++.    ..|+||++||..+..+.|     
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~----~~g~iv~isS~~~~~~~~-----  151 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQG----TGGHVVFTASFAGLVPNA-----  151 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCCEEEEeCChhhccCCC-----
Confidence            9999999999998543  34567789999999999999999999999997641    267999999999887644     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH----------HHHHH-h
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG----------LVGLL-G  252 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~-~  252 (319)
                                ++..|++||+++.+|+++|+.+++..|  |+|++|+||+++|++..+......          ..... .
T Consensus       152 ----------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK05876        152 ----------GLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPL  219 (275)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccchhhhcCccccccccccccccccc
Confidence                      367899999999999999999999888  999999999999998654310000          00001 1


Q ss_pred             hhhcCCHHHHHHHHHHHhc
Q 020927          253 KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~  271 (319)
                      ...+.+|+++|+.++..+.
T Consensus       220 ~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        220 QDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             cccCCCHHHHHHHHHHHHH
Confidence            1234689999999999885

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.3e-34  Score=249.64  Aligned_cols=237  Identities=28%  Similarity=0.301  Sum_probs=199.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++++++|||||+++||++++++|+++|++|++++|+.+..+...+.+..   +.++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999887776666543   45688999999999999999999988


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|++|||+|....   ..+.+.+++++.+++|+.+++.+++.+++.|.+.     ..++||++||..+..+.+   
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  149 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-----GGGAIVNVASTAGLRPRP---  149 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhcCCCC---
Confidence            88999999999997533   2356778899999999999999999999999764     367999999998877544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh------HHHHHHHHhhhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF------FSGLVGLLGKYV  255 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~  255 (319)
                                  +...|+.+|++++.+++.++.++++.+  |++++++||++.|++......      ...+....+...
T Consensus       150 ------------~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T PRK07231        150 ------------GLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGR  215 (251)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCC
Confidence                        367899999999999999999999888  999999999999998664311      112223334455


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.+|+|+|+++++++ ++...+++|+++..+|
T Consensus       216 ~~~~~dva~~~~~l~-~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        216 LGTPEDIANAALFLA-SDEASWITGVTLVVDG  246 (251)
T ss_pred             CcCHHHHHHHHHHHh-CccccCCCCCeEEECC
Confidence            679999999999999 5777789999877333

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=9.7e-34  Score=247.64  Aligned_cols=226  Identities=24%  Similarity=0.294  Sum_probs=182.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||++++++|+++|++|+++++ +.+..++....+       .+.++.+|+++.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH---
Confidence            478999999999999999999999999999988876 444444433221       356788999999988877653   


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p~~~  181 (319)
                       ++++|++|||||....  ..+.+.++|++.+++|+.+++.+++.+++.|.+       .++||++||..+. .+.    
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~----  140 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRMPV----  140 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccCCC----
Confidence             5689999999997543  335677899999999999999999999999854       5799999998774 232    


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-hHHHHHHHHhhhhcCCHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~  260 (319)
                                 .++..|+++|++++.+++.++.++.+.|  |+||+|+||+++|++..... ..+......+..++.+|+
T Consensus       141 -----------~~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~  207 (237)
T PRK12742        141 -----------AGMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPE  207 (237)
T ss_pred             -----------CCCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHH
Confidence                       2467899999999999999999999999  99999999999999865432 222223334455678999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      |+++.++||+ ++...+++|+.+. |+|
T Consensus       208 ~~a~~~~~l~-s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        208 EVAGMVAWLA-GPEASFVTGAMHTIDGA  234 (237)
T ss_pred             HHHHHHHHHc-CcccCcccCCEEEeCCC
Confidence            9999999998 6888999999887 444

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=250.03  Aligned_cols=242  Identities=26%  Similarity=0.257  Sum_probs=199.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||+++||.+++++|+++|++|++++|+.+..+...+.+...  +.++.++.+|++++++++++++++.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~   84 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETL   84 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998877777766543  5578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHH-HhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLET-MGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~-l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|++|||||....  ..+.+.+.|++.+++|+.+++.+++++.++ |.++     ..++||++||..+..+.+. 
T Consensus        85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-----~~~~~v~~sS~~~~~~~~~-  158 (259)
T PRK08213         85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-----GYGRIINVASVAGLGGNPP-  158 (259)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCCc-
Confidence            988899999999997533  334567889999999999999999999998 6543     3579999999887764432 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~  258 (319)
                                ...++..|+++|++++.++++++.++.++|  |+++.|+||+++|++.... + +........+.....+
T Consensus       159 ----------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T PRK08213        159 ----------EVMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGD  226 (259)
T ss_pred             ----------cccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcC
Confidence                      122457899999999999999999999999  9999999999999876543 1 1122222334445568


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+++++.+++++ ++.+.+++|+.+.-+
T Consensus       227 ~~~va~~~~~l~-~~~~~~~~G~~~~~~  253 (259)
T PRK08213        227 DEDLKGAALLLA-SDASKHITGQILAVD  253 (259)
T ss_pred             HHHHHHHHHHHh-CccccCccCCEEEEC
Confidence            999999999999 688889999988743

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-34  Score=249.81  Aligned_cols=236  Identities=22%  Similarity=0.263  Sum_probs=194.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |.++++|||||++|||++++++|+++|++|++ ..|+.+..+++.+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999776 578888877777777654  567899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||+|....  ..+.+.+.++..+++|+.+++.+++++++.|.+.     +.++||++||..+..+.+     
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~-----  149 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-----GGGKIISLSSLGSIRYLE-----  149 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhccCCC-----
Confidence            9999999999997533  3356678889999999999999999999999764     367999999987765433     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHH----HHHHhhhhcCCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL----VGLLGKYVIKNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~  259 (319)
                                ++..|+++|++++.|+++++.++.+.|  |++|+|+||++.|++..........    ....+...+.++
T Consensus       150 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (250)
T PRK08063        150 ----------NYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEP  217 (250)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCH
Confidence                      367899999999999999999999888  9999999999999986543211111    112233456799


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+.+++++ ++...+++|+.+. ++|
T Consensus       218 ~dva~~~~~~~-~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        218 EDVANAVLFLC-SPEADMIRGQTIIVDGG  245 (250)
T ss_pred             HHHHHHHHHHc-CchhcCccCCEEEECCC
Confidence            99999999998 4666788999777 444

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.9e-34  Score=277.34  Aligned_cols=236  Identities=26%  Similarity=0.327  Sum_probs=197.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999988877665554     456788999999999999999999999


Q ss_pred             CCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          106 GLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       106 ~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++++|+||||||+..+    ..+.+.++|++++++|+.+++.++++++|+|.+..    ..++||++||..+..+.|+  
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~g~~iv~isS~~~~~~~~~--  150 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQG----HGAAIVNVASGAGLVALPK--  150 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCCeEEEECCcccCCCCCC--
Confidence            9999999999997432    33567789999999999999999999999997631    2349999999998876543  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----HHHHHHHHhhhhc
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----FSGLVGLLGKYVI  256 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~  256 (319)
                                   +..|+++|+++.+|++.|+.|+.+.|  |+|++|+||+++|++......     .......++..++
T Consensus       151 -------------~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (520)
T PRK06484        151 -------------RTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRL  215 (520)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCC
Confidence                         67899999999999999999999999  999999999999998654311     1122223344556


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+|+++++.+++++ ++...+++|+.+. ++|.
T Consensus       216 ~~~~~va~~v~~l~-~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        216 GRPEEIAEAVFFLA-SDQASYITGSTLVVDGGW  247 (520)
T ss_pred             cCHHHHHHHHHHHh-CccccCccCceEEecCCe
Confidence            79999999999999 5777899999777 4443

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=247.38  Aligned_cols=236  Identities=28%  Similarity=0.296  Sum_probs=195.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+.+...  +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777776666543  44678899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          105 SGLPLNILINNAGIMAT-----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .++++|+||||||+...     ..+.+.+.+++++++|+.+++.++++++|.|.+.     +.++||++||..++.    
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~----  150 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-----GGGAIVNQSSTAAWL----  150 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-----CCcEEEEEecccccC----
Confidence            99999999999998542     2345678899999999999999999999999763     367999999987664    


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhc
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVI  256 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  256 (319)
                                    +...|++||++++.+++.+++++...|  |+++.++||.++|++.....   ......+..+....
T Consensus       151 --------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (250)
T PRK07774        151 --------------YSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRM  214 (250)
T ss_pred             --------------CccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCC
Confidence                          246899999999999999999999888  99999999999999865432   11222233334445


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+|+++++.+++++ ++...+.+|+++..++.
T Consensus       215 ~~~~d~a~~~~~~~-~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        215 GTPEDLVGMCLFLL-SDEASWITGQIFNVDGG  245 (250)
T ss_pred             cCHHHHHHHHHHHh-ChhhhCcCCCEEEECCC
Confidence            68999999999998 45556788988775443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.9e-33  Score=247.57  Aligned_cols=235  Identities=25%  Similarity=0.276  Sum_probs=198.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++++++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998877776666544  5578999999999999999999999888


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|++|||+|....  ..+.+.+.+++.+++|+.+++.+.+.+.+.|.+.     +.++||++||..+..+.+      
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~iss~~~~~~~~------  147 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-----GAGRIVNIASDAARVGSS------  147 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEECchhhccCCC------
Confidence            999999999997533  3345667889999999999999999999999764     367999999998877543      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------hHHHHHHHHhhhhc
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------FFSGLVGLLGKYVI  256 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~  256 (319)
                               ....|+.+|++++.+++.++.++...+  ++++.++||.+.|++.....        ....+....+...+
T Consensus       148 ---------~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T TIGR03206       148 ---------GEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRL  216 (250)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCC
Confidence                     367899999999999999999998888  99999999999999755321        11223334445566


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+|+|+|+.+++++ ++...+++|+.+.-+
T Consensus       217 ~~~~dva~~~~~l~-~~~~~~~~g~~~~~~  245 (250)
T TIGR03206       217 GQPDDLPGAILFFS-SDDASFITGQVLSVS  245 (250)
T ss_pred             cCHHHHHHHHHHHc-CcccCCCcCcEEEeC
Confidence            78999999999998 678889999988733

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=2.3e-33  Score=246.25  Aligned_cols=235  Identities=25%  Similarity=0.340  Sum_probs=195.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||+++||++++++|+++|+.|++.+|+.+.++.....+     +.++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999987776654433     45688899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||||....  ..+.+.+++++++++|+.+++.+++.+.+.+.++     ..++||++||..+..+.|.   
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~---  148 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-----RYGRIINITSVVGVTGNPG---  148 (245)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-----CCCEEEEECCHHhCcCCCC---
Confidence            99999999999998543  2345667899999999999999999999988653     3679999999888875443   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH--HHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS--GLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~  260 (319)
                                  +..|+.+|+++..+++.++.++...|  +++++++||+++|++........  ......+..++.+|+
T Consensus       149 ------------~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
T PRK12936        149 ------------QANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGA  214 (245)
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHH
Confidence                        67899999999999999999999888  99999999999998865442111  122234455567899


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ++++.+++++ ++...+++|+++. ++|
T Consensus       215 ~ia~~~~~l~-~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        215 EVASAVAYLA-SSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HHHHHHHHHc-CccccCcCCCEEEECCC
Confidence            9999999998 5667789999877 544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.8e-33  Score=249.42  Aligned_cols=239  Identities=21%  Similarity=0.177  Sum_probs=182.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH----HHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASV----RKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v----~~~~~~i~~  104 (319)
                      ++++||||++|||++++++|+++|++|++++| +++.++...+.+.... +.++.++.+|+++++++    +++++++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999865 5666776666664432 34677899999999866    455666667


Q ss_pred             cCCCccEEEEccccCCC--CcccCc-----------ccccchhhhhhhHHHHHHHHHHHHHhcccc-cCCCCCeEEEeCC
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSK-----------DNIELQFATNHIGHFLLTNLLLETMGKTAR-ESSKEGRIVNVSS  170 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~-----------~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~~~ii~isS  170 (319)
                      .++++|+||||||+..+  ..+.+.           +.|.+++++|+.+++.+++.++|.|+.... ..+..++||+++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            78899999999997543  112222           247889999999999999999999864311 1123568999999


Q ss_pred             cccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH
Q 020927          171 RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL  250 (319)
Q Consensus       171 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~  250 (319)
                      ..+..+.|               ++..|++||+++++|+++|+.|+.+.|  |+||+|+||++.|+..........+...
T Consensus       161 ~~~~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~~~~~~~~~~~~~~  223 (267)
T TIGR02685       161 AMTDQPLL---------------GFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPDAMPFEVQEDYRRK  223 (267)
T ss_pred             hhccCCCc---------------ccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCccccchhHHHHHHHh
Confidence            88776533               467899999999999999999999999  9999999999987632211112222222


Q ss_pred             Hhhh-hcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          251 LGKY-VIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       251 ~~~~-~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+.. +..+|+++++.+++++ ++...+++|+.+..+|
T Consensus       224 ~~~~~~~~~~~~va~~~~~l~-~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       224 VPLGQREASAEQIADVVIFLV-SPKAKYITGTCIKVDG  260 (267)
T ss_pred             CCCCcCCCCHHHHHHHHHHHh-CcccCCcccceEEECC
Confidence            2322 4579999999999999 6788899999877443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.8e-33  Score=246.36  Aligned_cols=230  Identities=20%  Similarity=0.244  Sum_probs=191.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +|||||++|||+++|++|+++|++|++++|+ .+..+...+.+...  +.++.++.+|+++++++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998864 45566666666554  45799999999999999999999988899999


Q ss_pred             EEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHH-HHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          111 ILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLL-ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       111 ~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|||+|+...  ..+.+.++|+.++++|+.+++.+++.++ |.+.+.     +.++||++||..+..+.|         
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~---------  144 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-----QGGRIITLASVSGVMGNR---------  144 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-----CCeEEEEEcchhhccCCC---------
Confidence            99999998654  2346778899999999999999999875 554432     367999999998887644         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-HHHHHHHHhhhhcCCHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-FSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                            ++..|+++|++++.++++++.++.++|  |++++|+||+++|++...... ........+..++.+|+|+++.+
T Consensus       145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  216 (239)
T TIGR01831       145 ------GQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLA  216 (239)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                  367899999999999999999999999  999999999999999775432 22333344556677999999999


Q ss_pred             HHHhcCCCccCCCcccccCC
Q 020927          267 CYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~~  286 (319)
                      +||+ ++.+.+++|+.+..+
T Consensus       217 ~~l~-~~~~~~~~g~~~~~~  235 (239)
T TIGR01831       217 GFLM-SDGASYVTRQVISVN  235 (239)
T ss_pred             HHHc-CchhcCccCCEEEec
Confidence            9999 688899999987733

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=245.69  Aligned_cols=238  Identities=26%  Similarity=0.303  Sum_probs=192.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++|||||++|||.++++.|+++|++|+++. |+++..+.....+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999988764 6777777766666543  45789999999999999999999988889


Q ss_pred             CccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          108 PLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       108 ~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      ++|++|||||+...   ..+.+.++++..+++|+.+++.+++.+++.+..+..  ++.++||++||..+..+.+.     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~~~ii~~sS~~~~~~~~~-----  152 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--GRGGAIVNVSSIASRLGSPN-----  152 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcCCCCC-----
Confidence            99999999997643   235677889999999999999999999999875321  23578999999888764332     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhcCCHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~  261 (319)
                               .+..|++||+++++++++++.++.++|  |+|+.|+||+++|++.....   .........+..+..+|++
T Consensus       153 ---------~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  221 (248)
T PRK06947        153 ---------EYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADE  221 (248)
T ss_pred             ---------CCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHH
Confidence                     246799999999999999999999888  99999999999999864321   1111112223344578999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++.+++++ +....+++|+++..+|
T Consensus       222 va~~~~~l~-~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        222 VAETIVWLL-SDAASYVTGALLDVGG  246 (248)
T ss_pred             HHHHHHHHc-CccccCcCCceEeeCC
Confidence            999999998 5777789999987444

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-33  Score=247.14  Aligned_cols=242  Identities=21%  Similarity=0.156  Sum_probs=198.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.......++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777766665443235788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++++|++|||+|....   ..+.+.+++..++++|+.+++.+++.+++.|.+.     ..++||++||..+..+.|   
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~~---  154 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-----GGGSFVGISSIAASNTHR---  154 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhcCCCC---
Confidence            99999999999997532   3345667899999999999999999999999763     367999999988876533   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~  257 (319)
                                  +...|+++|++++.+++.++.++...+  |++++|+||+++|++.......    ..+....+..++.
T Consensus       155 ------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (276)
T PRK05875        155 ------------WFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVG  220 (276)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCc
Confidence                        367899999999999999999999988  9999999999999986543111    1122223344556


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      .|+|+++.+++++ +....+++|+++..++..
T Consensus       221 ~~~dva~~~~~l~-~~~~~~~~g~~~~~~~g~  251 (276)
T PRK05875        221 EVEDVANLAMFLL-SDAASWITGQVINVDGGH  251 (276)
T ss_pred             CHHHHHHHHHHHc-CchhcCcCCCEEEECCCe
Confidence            8999999999999 566678899988844443

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=244.11  Aligned_cols=208  Identities=19%  Similarity=0.193  Sum_probs=172.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..+.+       ++.++++|++++++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            5899999999999999999999999999999988776655433       356889999999999999887743   699


Q ss_pred             EEEEccccCCC---C----cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          111 ILINNAGIMAT---P----FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       111 ~lv~nag~~~~---~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +||||+|....   +    ...+.++|++++++|+.+++++++.++|.|++       .|+||+++|.+.    |     
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~----~-----  135 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPENP----P-----  135 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCCC----C-----
Confidence            99999985321   1    11145789999999999999999999999954       579999999651    2     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                                .+..|++||+|+.+|+++|+.+++++|  |+||+|+||+++|++.....       ..+   ..+|+|++
T Consensus       136 ----------~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~~~~-------~~p---~~~~~~ia  193 (223)
T PRK05884        136 ----------AGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYDGLS-------RTP---PPVAAEIA  193 (223)
T ss_pred             ----------CccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhhhcc-------CCC---CCCHHHHH
Confidence                      247899999999999999999999999  99999999999998643221       111   23799999


Q ss_pred             HHHHHHhcCCCccCCCcccccCCc
Q 020927          264 ATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.++||+ ++.+.+++|+.+..+|
T Consensus       194 ~~~~~l~-s~~~~~v~G~~i~vdg  216 (223)
T PRK05884        194 RLALFLT-TPAARHITGQTLHVSH  216 (223)
T ss_pred             HHHHHHc-CchhhccCCcEEEeCC
Confidence            9999998 6889999999887443

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=245.02  Aligned_cols=230  Identities=21%  Similarity=0.223  Sum_probs=190.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC--HHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS--LASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~--~~~v~~~~~~i  102 (319)
                      .+|++|+++||||++|||++++++|+++|++|++++|+++..+...+++.... +..+.++.+|+++  .+++.++++++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988887777765432 3457788999976  57889999999


Q ss_pred             HhcC-CCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          103 KSSG-LPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       103 ~~~~-~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      .+.+ +++|++|||||....   ..+.+.+++.+.+++|+.+++.+++.++|.|.+.     ..+++|+++|..+..+.|
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~  155 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-----PDASVIFVGESHGETPKA  155 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-----CCCEEEEEeccccccCCC
Confidence            8877 789999999997532   3456678899999999999999999999998763     368999999988776533


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC-CCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED-GVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK  257 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (319)
                                     ++..|++||++++.|+++++.++.+. +  |+|++|+||++.|++.........      .....
T Consensus       156 ---------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~------~~~~~  212 (239)
T PRK08703        156 ---------------YWGGFGASKAALNYLCKVAADEWERFGN--LRANVLVPGPINSPQRIKSHPGEA------KSERK  212 (239)
T ss_pred             ---------------CccchHHhHHHHHHHHHHHHHHhccCCC--eEEEEEecCcccCccccccCCCCC------ccccC
Confidence                           36789999999999999999999876 5  999999999999998553311110      11235


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ++++++..++|++ ++.+.++||+.+.
T Consensus       213 ~~~~~~~~~~~~~-~~~~~~~~g~~~~  238 (239)
T PRK08703        213 SYGDVLPAFVWWA-SAESKGRSGEIVY  238 (239)
T ss_pred             CHHHHHHHHHHHh-CccccCcCCeEee
Confidence            8999999999999 6899999999764

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.8e-33  Score=245.83  Aligned_cols=235  Identities=25%  Similarity=0.252  Sum_probs=193.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+.+........+.++.+|++++++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666666666665443233466789999999999999999999999999


Q ss_pred             EEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          111 ILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       111 ~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      ++|||||....  ..+.+.+++++++++|+.+++.+++.++|.|.+.     +.++||++||..+..+.|          
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~~~~~----------  146 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAFKAEP----------  146 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhccCCC----------
Confidence            99999997643  3355678899999999999999999999999764     367999999998887544          


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------hHHHHHHHHhhhhcCCHHH
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~  261 (319)
                           ++..|+++|++++.++++++.++.+++.+|+|+.|+||+++|++.....       .+.......+..++.+|++
T Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (251)
T PRK07069        147 -----DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDD  221 (251)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHH
Confidence                 3678999999999999999999988776799999999999999865321       1111222234455678999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +++.+++++ ++...+++|+.+. ++|
T Consensus       222 va~~~~~l~-~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        222 VAHAVLYLA-SDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHHc-CccccCccCCEEEECCC
Confidence            999999988 5777899999777 544

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-33  Score=244.14  Aligned_cols=236  Identities=29%  Similarity=0.294  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.   .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999887777666654   256789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||+|....  ..+.+.++++..+++|+.+++.+.+.+++.|++.     ..++||++||..+..+.+    
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~sS~~~~~~~~----  148 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-----GGGSIVNTASQLALAGGR----  148 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-----CCeEEEEECChhhccCCC----
Confidence            99999999999997644  2345678899999999999999999999999764     367999999998876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHH----HHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVG----LLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~----~~~~~  254 (319)
                                 +...|+.+|++++.+++.++.++..+|  +++++++||++.|++.....    .......    ..+..
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK06138        149 -----------GRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMN  215 (252)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCC
Confidence                       367899999999999999999999888  99999999999999865431    0111111    11222


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+.+++++++.+++++ ++...+.+|+++..+
T Consensus       216 ~~~~~~d~a~~~~~l~-~~~~~~~~g~~~~~~  246 (252)
T PRK06138        216 RFGTAEEVAQAALFLA-SDESSFATGTTLVVD  246 (252)
T ss_pred             CCcCHHHHHHHHHHHc-CchhcCccCCEEEEC
Confidence            3568999999999998 466678899977733

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.2e-33  Score=256.16  Aligned_cols=214  Identities=21%  Similarity=0.279  Sum_probs=175.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++..|++++||||++|||+++|++|+++|++|++++|+++.++++.+++...+++.++..+.+|+++  ++.+.++++.+
T Consensus        49 ~~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~  126 (320)
T PLN02780         49 LKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKE  126 (320)
T ss_pred             ccccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHH
Confidence            4456999999999999999999999999999999999999999998888877656688899999985  22333333333


Q ss_pred             cCC--CccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-C-
Q 020927          105 SGL--PLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-S-  176 (319)
Q Consensus       105 ~~~--~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~-  176 (319)
                      ..+  .+|+||||||+...    ..+.+.+++++++++|+.|++.+++.++|.|.++     +.|+||++||.++.. + 
T Consensus       127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS~a~~~~~~  201 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIINIGSGAAIVIPS  201 (320)
T ss_pred             HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccCCC
Confidence            333  46799999998642    3356778899999999999999999999999764     478999999998864 2 


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhc
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVI  256 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  256 (319)
                      .|               .+..|++||+++++|+++|+.|++++|  |+|++|+||+++|++.....         .....
T Consensus       202 ~p---------------~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~~~~---------~~~~~  255 (320)
T PLN02780        202 DP---------------LYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMASIRR---------SSFLV  255 (320)
T ss_pred             Cc---------------cchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCcccccC---------CCCCC
Confidence            23               367899999999999999999999999  99999999999999865211         01124


Q ss_pred             CCHHHHHHHHHHHhc
Q 020927          257 KNVEQGAATTCYVAL  271 (319)
Q Consensus       257 ~~~~~va~~i~~l~~  271 (319)
                      .+|+++|+.++..+.
T Consensus       256 ~~p~~~A~~~~~~~~  270 (320)
T PLN02780        256 PSSDGYARAALRWVG  270 (320)
T ss_pred             CCHHHHHHHHHHHhC
Confidence            589999999999983

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-33  Score=229.53  Aligned_cols=184  Identities=29%  Similarity=0.327  Sum_probs=166.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++.|.|||||||++|||+++|++|.+.|.+|++++|+++.++++.++      ...+....||+.|.++++++++++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHh
Confidence            578999999999999999999999999999999999999888877665      55688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCc----ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGLPLNILINNAGIMATPF----MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~----~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +|..+|+||||||++....    +...+..++.+++|+.++..+.+.++|++.++     +.+.||+|||..+..|..  
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-----~~a~IInVSSGLafvPm~--  147 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-----PEATIINVSSGLAFVPMA--  147 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-----CCceEEEeccccccCccc--
Confidence            9999999999999986622    33456678889999999999999999999885     488999999999998633  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                                   ..+.|+++|+|++.|+.+|+..+...+  |.|.-+.|-.|+|+
T Consensus       148 -------------~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         148 -------------STPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             -------------ccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence                         478999999999999999999999988  99999999999996

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6e-33  Score=244.82  Aligned_cols=230  Identities=26%  Similarity=0.304  Sum_probs=191.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.         +...  +.++.++++|+++++++.++++++.
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   71 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLL   71 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999986         1111  4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||+|....  ..+.+.+++...+++|+.+++.+++.+++.|++.     +.++||++||..+..+.+   
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~~ss~~~~~~~~---  143 (252)
T PRK08220         72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-----RSGAIVTVGSNAAHVPRI---  143 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECCchhccCCC---
Confidence            999999999999997543  3345678899999999999999999999999764     367999999988776433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---h---------HHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---F---------FSGLVG  249 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~---------~~~~~~  249 (319)
                                  ++..|+++|++++.+++.++.++.+.|  |+||+++||++.|++.....   .         ...+..
T Consensus       144 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (252)
T PRK08220        144 ------------GMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL  209 (252)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh
Confidence                        367899999999999999999999998  99999999999999754320   0         011112


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+..++..|+|+|+++++|+ ++...+++|+.+. ++|
T Consensus       210 ~~~~~~~~~~~dva~~~~~l~-~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        210 GIPLGKIARPQEIANAVLFLA-SDLASHITLQDIVVDGG  247 (252)
T ss_pred             cCCCcccCCHHHHHHHHHHHh-cchhcCccCcEEEECCC
Confidence            234455678999999999999 6778899999877 444

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-33  Score=248.26  Aligned_cols=214  Identities=26%  Similarity=0.289  Sum_probs=184.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++++++|||||++|||++++++|+++|++|++++|+++.+++..+.+.      ++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988776655541      578899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||||+...  ..+.+.+.+++++++|+.+++.+++.++|.|.+.     +.++||++||.++..+.|    
T Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  145 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-----GRGHVVNVASLAGKIPVP----  145 (273)
T ss_pred             HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEEcCccccCCCC----
Confidence            99999999999998644  3355678899999999999999999999999874     468999999999887644    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 ++..|++||+++.+|+++++.++.+.|  |++++|+||++.|++......       .......+|+++
T Consensus       146 -----------~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~v  205 (273)
T PRK07825        146 -----------GMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGTGG-------AKGFKNVEPEDV  205 (273)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhccccc-------ccCCCCCCHHHH
Confidence                       367899999999999999999999999  999999999999998665421       112235789999


Q ss_pred             HHHHHHHhcCC
Q 020927          263 AATTCYVALHP  273 (319)
Q Consensus       263 a~~i~~l~~s~  273 (319)
                      |+.++.++.++
T Consensus       206 a~~~~~~l~~~  216 (273)
T PRK07825        206 AAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHhCC
Confidence            99999999543

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=242.58  Aligned_cols=238  Identities=28%  Similarity=0.334  Sum_probs=191.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|++|||||+++||.+++++|+++|++|+++. |+++..+.....+...  +.++.++.+|+++.+++.++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999988876 5555555555555443  45688999999999999999999999999


Q ss_pred             CccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          108 PLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       108 ~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      ++|+||||||....   ..+.+.++|++++++|+.+++.+++.+++.|.++.  .+++++||++||..+..+.|.     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~-----  152 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH--GGRGGAIVNVSSMAARLGSPG-----  152 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCCCeEEEEECchhhcCCCCC-----
Confidence            99999999998643   23456788999999999999999999999987531  112578999999988765442     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCCHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~  261 (319)
                               .+..|+++|++++.+++.++.++.++|  |+|++|+||.+.|++....   ..........+..+..+|+|
T Consensus       153 ---------~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  221 (248)
T PRK06123        153 ---------EYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEE  221 (248)
T ss_pred             ---------CccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHH
Confidence                     135699999999999999999999988  9999999999999975432   11122222334445568999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++++++++ ++...+++|+.+..+|
T Consensus       222 ~a~~~~~l~-~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        222 VARAILWLL-SDEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHHHHHHh-CccccCccCCEEeecC
Confidence            999999998 5667788999877444

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-33  Score=245.85  Aligned_cols=233  Identities=22%  Similarity=0.253  Sum_probs=182.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR----NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      .++++|++|||||++|||+++|+.|+++|++|+++++    +.+..++..+++...  +.++.++++|++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence            4578999999999999999999999999999666654    334455555555443  4578899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEe-CCcccccCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNV-SSRRHQFSY  177 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~i-sS~~~~~~~  177 (319)
                      ++.+.++++|++|||||+...  ..+.+.+++++++++|+.+++.+++.++|.|.+       .++++++ +|..+. +.
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~-~~  153 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGA-FT  153 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhcc-cC
Confidence            999989999999999998543  335667889999999999999999999999864       4577766 454332 22


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH------HHH--
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG------LVG--  249 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~--  249 (319)
                      |               .+..|++||+|++.|+++++.++.+.|  |+||+|+||++.|++..+......      ...  
T Consensus       154 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T PRK12744        154 P---------------FYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALS  216 (257)
T ss_pred             C---------------CcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhccccccchhhccccccccc
Confidence            2               357899999999999999999999988  999999999999987643211110      000  


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+...++..|+|+|+.+.+++ ++ ..+++|+.+..+
T Consensus       217 ~~~~~~~~~~~dva~~~~~l~-~~-~~~~~g~~~~~~  251 (257)
T PRK12744        217 PFSKTGLTDIEDIVPFIRFLV-TD-GWWITGQTILIN  251 (257)
T ss_pred             ccccCCCCCHHHHHHHHHHhh-cc-cceeecceEeec
Confidence            111125678999999999999 44 578899877743

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.5e-32  Score=241.74  Aligned_cols=234  Identities=26%  Similarity=0.304  Sum_probs=192.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|+++||||++|||.+++++|+++|++|+++. |+++..++..+.+...  +.++.++++|+++++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999988765 4566666666666543  45799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC--cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||||.....  .+.+.+.+++.+++|+.+++.+++.++|.|.+.     ..++||++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~----  151 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-----EEGRIISISSIIGQAGGF----  151 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchhhcCCCC----
Confidence            999999999999986542  245668899999999999999999999999753     367999999988776433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~  260 (319)
                                 ++..|++||++++.+++.++.++.+.|  |+++.|+||.++|++......  ........+...+..|+
T Consensus       152 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~e  218 (247)
T PRK12935        152 -----------GQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQAD  218 (247)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHH
Confidence                       467899999999999999999998888  999999999999988665421  12222334445568999


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccC
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      |+++++++++. + ..+++|+.+.-
T Consensus       219 dva~~~~~~~~-~-~~~~~g~~~~i  241 (247)
T PRK12935        219 EIAKGVVYLCR-D-GAYITGQQLNI  241 (247)
T ss_pred             HHHHHHHHHcC-c-ccCccCCEEEe
Confidence            99999999984 4 35788987763

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=243.62  Aligned_cols=232  Identities=23%  Similarity=0.251  Sum_probs=189.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++||+++||||++|||.+++++|+++|++|++++|+....+...+.+     +  ..++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999987766554433     1  2578999999999999999998888


Q ss_pred             CCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          107 LPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       107 ~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++|++|||||...+    ..+.+.+.+++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.+    
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~g~iv~~sS~~~~~g~~----  148 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-----GKGSIINTASFVAVMGSA----  148 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-----CCcEEEEEcchhhccCCC----
Confidence            899999999997543    2245667899999999999999999999999764     367999999987665322    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHHHHHhhhhcC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLVGLLGKYVIK  257 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~  257 (319)
                                .++..|+.+|++++.+++.++.++.++|  |+|++|+||.++|++....-     .........+...+.
T Consensus       149 ----------~~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T PRK06057        149 ----------TSQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFA  216 (255)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCc
Confidence                      1356899999999999999999999988  99999999999999865331     011111123444568


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+++++.+.+++ ++...+++|+.+. ++|
T Consensus       217 ~~~~~a~~~~~l~-~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        217 EPEEIAAAVAFLA-SDDASFITASTFLVDGG  246 (255)
T ss_pred             CHHHHHHHHHHHh-CccccCccCcEEEECCC
Confidence            9999999999998 5778899999777 444

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=242.13  Aligned_cols=239  Identities=24%  Similarity=0.258  Sum_probs=196.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++|+++||||++|||+.++++|+++|++ |++++|+.+......+.+...  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999999998 999999987777666666433  56788999999999999999999998


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|++|||+|....  ..+.+.+.++.++++|+.+++.+++.+++.|.+.    ...+++|++||..+..+.|    
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~~ss~~~~~~~~----  152 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR----KAEGTIVNIGSMSAHGGQP----  152 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCCCEEEEECCcccccCCC----
Confidence            88999999999997643  2346778899999999999999999999999764    1257999999998876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---------hhHHHHHHHHhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---------SFFSGLVGLLGK  253 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~  253 (319)
                                 ++..|+.+|+++++++++++.++...+  |++++++||++.|++....         .+........+.
T Consensus       153 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06198        153 -----------FLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPF  219 (260)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCc
Confidence                       367899999999999999999999998  9999999999999874321         111111112233


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+..+++++++.+++++ ++...+++|+++..++.
T Consensus       220 ~~~~~~~~~a~~~~~l~-~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        220 GRLLDPDEVARAVAFLL-SDESGLMTGSVIDFDQS  253 (260)
T ss_pred             cCCcCHHHHHHHHHHHc-ChhhCCccCceEeECCc
Confidence            44578999999999999 56778899998874443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=242.53  Aligned_cols=236  Identities=27%  Similarity=0.255  Sum_probs=194.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||+++||++++++|+++|++|++++|+++..++..+.+...  +.++.++.+|+++.++++++++++.+.
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888887777554  557889999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHH-hcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETM-GKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l-~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|+||||+|....  ..+.+.+.++..+++|+.+++.+++.+++.+ +..     ..++||++||..+..+.|    
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~~~~----  152 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHEASP----  152 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcCCCC----
Confidence            8999999999998643  2245668899999999999999999999999 442     367999999987776433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-h--------HHHHHHH---
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-F--------FSGLVGL---  250 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~--------~~~~~~~---  250 (319)
                                 +...|+++|++++.+++.++.++.+.+  |++++|+||++.|++..... .        .......   
T Consensus       153 -----------~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        153 -----------LKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVML  219 (262)
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHh
Confidence                       357899999999999999999998888  99999999999998754321 0        0111111   


Q ss_pred             --HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          251 --LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       251 --~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                        .+...+.+++|+++++++++ +.....++|+++..+
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~-~~~~~~~~g~~~~~~  256 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLS-SFPSAALTGQSFVVS  256 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHc-CccccCCcCCEEeeC
Confidence              12345679999999999999 455577899987733

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.8e-33  Score=242.08  Aligned_cols=223  Identities=26%  Similarity=0.242  Sum_probs=180.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHH
Confidence            458899999999999999999999999999999999975321      0     34688999999987      344444


Q ss_pred             cCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|++|||||+..   +..+.+.+++++.+++|+.+++.+++.++|.+.++     +.++||++||..+..+.+   
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  135 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-----KSGIIINMCSIASFVAGG---  135 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhccCCC---
Confidence            5679999999999753   23456778899999999999999999999999764     368999999998876543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h---hHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S---FFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~  257 (319)
                                  ++..|+.+|++++.+++.++.++.+.|  |+||+|+||+++|++.... .   .........+..++.
T Consensus       136 ------------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (235)
T PRK06550        136 ------------GGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWA  201 (235)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCC
Confidence                        367899999999999999999999988  9999999999999975422 1   111222233455567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+|+|+.++|++ ++...+++|+.+..+|
T Consensus       202 ~~~~~a~~~~~l~-s~~~~~~~g~~~~~~g  230 (235)
T PRK06550        202 EPEEVAELTLFLA-SGKADYMQGTIVPIDG  230 (235)
T ss_pred             CHHHHHHHHHHHc-ChhhccCCCcEEEECC
Confidence            9999999999999 6777899999877444

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=243.67  Aligned_cols=234  Identities=22%  Similarity=0.240  Sum_probs=190.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++...+.+     +.++.++++|+++++++.++++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999988766554432     34688899999999999999999998889


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||||+...  ..+.+.+.+++.+++|+.+++.+++.++|.|++.     ..++||++||..+..+.|.      
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~~------  145 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-----RSGHIIQISSIGGISAFPM------  145 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhcCCCCC------
Confidence            99999999998644  3356678999999999999999999999999764     3679999999988876443      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhH----HHHHHHHhhh
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFF----SGLVGLLGKY  254 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~----~~~~~~~~~~  254 (319)
                               +..|+++|++++.+++.++.++.+.|  |+|+.|+||.+.|++....       ...    ..+....+..
T Consensus       146 ---------~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (275)
T PRK08263        146 ---------SGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSER  214 (275)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhc
Confidence                     57899999999999999999999999  9999999999999987321       111    1122223444


Q ss_pred             hc-CCHHHHHHHHHHHhcCCCccCCCcccccCCccccc
Q 020927          255 VI-KNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQA  291 (319)
Q Consensus       255 ~~-~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~  291 (319)
                      .. .+|+++|+.+++++..+   ...++++.-.+....
T Consensus       215 ~~~~~p~dva~~~~~l~~~~---~~~~~~~~~~~~~~~  249 (275)
T PRK08263        215 SVDGDPEAAAEALLKLVDAE---NPPLRLFLGSGVLDL  249 (275)
T ss_pred             cCCCCHHHHHHHHHHHHcCC---CCCeEEEeCchHHHH
Confidence            55 78999999999999533   224667665554443

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-32  Score=240.59  Aligned_cols=235  Identities=23%  Similarity=0.249  Sum_probs=188.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +...+|++|||||++|||++++++|+++|++|+++.+ +.+..+.+.+.+...  +.++.++.+|+++.+++.++++++.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999999999888765 555566666666544  5578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||....  ..+.+.+.+++++++|+.+++.+++.+.+.+.+.     ..++||+++|..+..+.|.  
T Consensus        83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~~s~~~~~~~p~--  155 (258)
T PRK09134         83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-----ARGLVVNMIDQRVWNLNPD--  155 (258)
T ss_pred             HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECchhhcCCCCC--
Confidence            888999999999997644  3356678899999999999999999999998753     3679999998776654442  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (319)
                                   +..|++||++++.+++.++.++.+ +  |+|++|+||++.|+.......+.......+.....+|+|
T Consensus       156 -------------~~~Y~~sK~a~~~~~~~la~~~~~-~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d  219 (258)
T PRK09134        156 -------------FLSYTLSKAALWTATRTLAQALAP-R--IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEE  219 (258)
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHhcC-C--cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHH
Confidence                         468999999999999999999865 3  999999999999875332222222222334445578999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+.+++++.   ...++|+.+..+|
T Consensus       220 ~a~~~~~~~~---~~~~~g~~~~i~g  242 (258)
T PRK09134        220 IAAAVRYLLD---APSVTGQMIAVDG  242 (258)
T ss_pred             HHHHHHHHhc---CCCcCCCEEEECC
Confidence            9999999994   2467898777443

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-32  Score=244.63  Aligned_cols=215  Identities=27%  Similarity=0.302  Sum_probs=178.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..        ...+.++.+|++++++++++++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999999999999987665432        1247889999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++++..+++|+.+++.+++.++|.|++.     ..++||++||..+..+.|.     
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~~-----  142 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSMGGKIYTPL-----  142 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhcCCCCC-----
Confidence            999999999998543  3356778999999999999999999999999764     3679999999887765442     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----------hHH--------H
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----------FFS--------G  246 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----------~~~--------~  246 (319)
                                ...|+++|+++++|+++++.++++.|  |++++|+||+++|++.....          ...        .
T Consensus       143 ----------~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (273)
T PRK06182        143 ----------GAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAAS  210 (273)
T ss_pred             ----------ccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHH
Confidence                      45799999999999999999999999  99999999999999753210          000        1


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhc
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~  271 (319)
                      +....+..++.+|+++|+.+++++.
T Consensus       211 ~~~~~~~~~~~~~~~vA~~i~~~~~  235 (273)
T PRK06182        211 MRSTYGSGRLSDPSVIADAISKAVT  235 (273)
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHh
Confidence            1111233456799999999999995

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=245.57  Aligned_cols=219  Identities=24%  Similarity=0.250  Sum_probs=182.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            357789999999999999999999999999999999999998888877777554  456889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCCCc--c--cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          103 KSSGLPLNILINNAGIMATPF--M--LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~--~--~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      .+.++++|++|||||+.....  +  .+.++++..+++|+.+++.+++.++|.|.+.     ..++||++||.++...  
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~--  184 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-----GDGHIINVATWGVLSE--  184 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcEEEEECChhhcCC--
Confidence            999999999999999764421  1  1236778899999999999999999999764     3689999999765431  


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (319)
                                  ...+...|++||+++++|+++++.|+++.|  |+|++|+||+++|++.......       ......+
T Consensus       185 ------------~~p~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~~~~~-------~~~~~~~  243 (293)
T PRK05866        185 ------------ASPLFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAPTKAY-------DGLPALT  243 (293)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCccccccccc-------cCCCCCC
Confidence                        012357899999999999999999999999  9999999999999987543111       1112468


Q ss_pred             HHHHHHHHHHHhc
Q 020927          259 VEQGAATTCYVAL  271 (319)
Q Consensus       259 ~~~va~~i~~l~~  271 (319)
                      |+++|+.++..+.
T Consensus       244 pe~vA~~~~~~~~  256 (293)
T PRK05866        244 ADEAAEWMVTAAR  256 (293)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999985

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.9e-32  Score=239.23  Aligned_cols=236  Identities=25%  Similarity=0.263  Sum_probs=191.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++|||||+++||+++|++|+++|++|++++|+.. ...+.......  .+.++.++.+|+++++++.++++++.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999854 12222222211  245789999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||+|....  ..+.+.++|++++++|+.+++.+++.+++.|.+.     ..++||++||..+..+.|       
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~-------  147 (245)
T PRK12824         80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-----GYGRIINISSVNGLKGQF-------  147 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----CCeEEEEECChhhccCCC-------
Confidence            99999999998643  3456778999999999999999999999999764     367999999998876544       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~va  263 (319)
                              ++..|+++|++++++++.++.++.+.|  |++++++||.+.|++......  ...+....+.....++++++
T Consensus       148 --------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  217 (245)
T PRK12824        148 --------GQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIA  217 (245)
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHH
Confidence                    367899999999999999999999888  999999999999998664421  11222233344566899999


Q ss_pred             HHHHHHhcCCCccCCCcccccCCccc
Q 020927          264 ATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      +.+++++ ++...+++|+.+..+|..
T Consensus       218 ~~~~~l~-~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        218 AAVAFLV-SEAAGFITGETISINGGL  242 (245)
T ss_pred             HHHHHHc-CccccCccCcEEEECCCe
Confidence            9999998 566778999988844433

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-32  Score=269.84  Aligned_cols=225  Identities=27%  Similarity=0.268  Sum_probs=190.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ...+.++++|||||++|||++++++|+++|++|++++|+.+.++++.+.+...  +.++.++.+|+++++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            35578899999999999999999999999999999999998888887777654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++++.++++|+.|++.+++.++|.|.+++    ..|+||++||.+++.+.|   
T Consensus       388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~~~---  460 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERG----TGGHIVNVASAAAYAPSR---  460 (582)
T ss_pred             HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCcEEEEECChhhccCCC---
Confidence            999999999999998644  34567789999999999999999999999998741    258999999999987644   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-------H---HHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-------S---GLVGLL  251 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-------~---~~~~~~  251 (319)
                                  +...|++||+++++++++|+.++++.|  |+|++|+||+++|++.....+.       .   ......
T Consensus       461 ------------~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (582)
T PRK05855        461 ------------SLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKL  526 (582)
T ss_pred             ------------CCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhh
Confidence                        368899999999999999999999999  9999999999999987654210       0   011111


Q ss_pred             hhhhcCCHHHHHHHHHHHhc
Q 020927          252 GKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~  271 (319)
                      ......+|+++|+.+++.+.
T Consensus       527 ~~~~~~~p~~va~~~~~~~~  546 (582)
T PRK05855        527 YQRRGYGPEKVAKAIVDAVK  546 (582)
T ss_pred             ccccCCCHHHHHHHHHHHHH
Confidence            12233589999999999995

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.2e-32  Score=238.13  Aligned_cols=236  Identities=22%  Similarity=0.241  Sum_probs=193.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++|+++|||||++|||+++++.|+++|++|++++|+++.++...+.+...  +.++.++.+|++++++++++++.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888777776554  56788999999999999999999988


Q ss_pred             cCCCccEEEEccccCCCC-----------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          105 SGLPLNILINNAGIMATP-----------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .++++|++|||+|.....           .+.+.+.+..++++|+.+++.+.+.+++.|.+..    ..++||++||...
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~----~~~~iv~~ss~~~  154 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESG----SKGVIINISSIAR  154 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCeEEEEEccccc
Confidence            888999999999975431           2345578889999999999999999999997642    3578999998654


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHH
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLL  251 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~  251 (319)
                      . +               ..+...|+++|++++.++++|+.++.++|  |++++++||.++|++.....  ....+....
T Consensus       155 ~-~---------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~  216 (253)
T PRK08217        155 A-G---------------NMGQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAMKPEALERLEKMI  216 (253)
T ss_pred             c-C---------------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCHHHHHHHHhcC
Confidence            3 2               22467899999999999999999998888  99999999999999876542  122222333


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +...+.+|+|+++.+++++.   ...++|+.+..+|
T Consensus       217 ~~~~~~~~~~~a~~~~~l~~---~~~~~g~~~~~~g  249 (253)
T PRK08217        217 PVGRLGEPEEIAHTVRFIIE---NDYVTGRVLEIDG  249 (253)
T ss_pred             CcCCCcCHHHHHHHHHHHHc---CCCcCCcEEEeCC
Confidence            44556799999999999993   2477999887444

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=239.22  Aligned_cols=236  Identities=29%  Similarity=0.291  Sum_probs=196.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||+++||++++++|+++|++|++++|+++..+.....+...  +.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888777776553  5679999999999999999999999988


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||....  ..+.+.+.++..+++|+.+++.+++.+++.|.+.     ..++||++||..+..+.+      
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~------  148 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-----GGGRIINMASVHGLVGSA------  148 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-----CCeEEEEEcchhhccCCC------
Confidence            999999999997544  2345667899999999999999999999999864     367999999998887533      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----------hhHHHHH----HH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----------SFFSGLV----GL  250 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~----~~  250 (319)
                               ++..|+++|++++.+++.++.++.+.+  |++++++||++.|++....          .......    ..
T Consensus       149 ---------~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK12429        149 ---------GKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPL  217 (258)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhcc
Confidence                     478899999999999999999999888  9999999999999875421          0011111    11


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+...+.+++|+|+++++++ ++....++|+++. ++|
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~-~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        218 VPQKRFTTVEEIADYALFLA-SFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             CCccccCCHHHHHHHHHHHc-CccccCccCCeEEeCCC
Confidence            23345678999999999998 4666778899777 544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=8.2e-32  Score=235.96  Aligned_cols=233  Identities=24%  Similarity=0.293  Sum_probs=192.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |++|||||++|||++++++|+++|++|+++.| +++..++....+...  +.++.++.+|+++++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999888 666566555554433  457899999999999999999999998899


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||+|...+  ..+.+.+.+++.+++|+.+++.+++.+++.|++.     +.++||++||..+..+.+        
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~iss~~~~~~~~--------  145 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-----GWGRIINISSVNGQKGQF--------  145 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcCCCC--------
Confidence            9999999997644  2345678899999999999999999999999764     357999999988776433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~va~  264 (319)
                             ++..|+++|++++.+++.++.++...|  |+++.++||++.|++.....  ....+....+...+.+|+++++
T Consensus       146 -------~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  216 (242)
T TIGR01829       146 -------GQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAA  216 (242)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence                   467899999999999999999999888  99999999999999866431  1222333344556679999999


Q ss_pred             HHHHHhcCCCccCCCccccc-CCc
Q 020927          265 TTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       265 ~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+.|++ ++...+++|+.+. ++|
T Consensus       217 ~~~~l~-~~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       217 AVAFLA-SEEAGYITGATLSINGG  239 (242)
T ss_pred             HHHHHc-CchhcCccCCEEEecCC
Confidence            999998 5667789999888 444

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.4e-32  Score=236.46  Aligned_cols=238  Identities=32%  Similarity=0.340  Sum_probs=198.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++++|++|||||+++||++++++|+++|++|+++ +|+++..+...+.+...  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46788999999999999999999999999999998 99988777766666543  5578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||+|....  ..+.+.+++++.+++|+.+++.+++.+++.+.+.     +.+++|++||..+..+.+   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~~~~---  150 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-----KSGVIVNISSIWGLIGAS---  150 (247)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHhhccCCC---
Confidence            888999999999998633  2346678899999999999999999999999764     367899999988876533   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH--HHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF--SGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~  259 (319)
                                  ....|+.+|++++.+++.++.++...|  +++++++||.++|++.+.....  ..+....+.....+|
T Consensus       151 ------------~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T PRK05565        151 ------------CEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKP  216 (247)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCH
Confidence                        367899999999999999999999888  9999999999999987655311  111112233445689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++++.+++++ ++....++|+++..++
T Consensus       217 ~~va~~~~~l~-~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        217 EEIAKVVLFLA-SDDASYITGQIITVDG  243 (247)
T ss_pred             HHHHHHHHHHc-CCccCCccCcEEEecC
Confidence            99999999999 5777889999888443

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=239.52  Aligned_cols=230  Identities=23%  Similarity=0.247  Sum_probs=187.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++.... ...+.++.+|++++++++++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999988887777776542 3345668999999999999999999989999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||+|+...  ..+.+.++++..+++|+.+++.+++.++|.|.+.    ...++||++||..+..+.|         
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~----~~~g~ii~isS~~~~~~~~---------  146 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA----GRGGHLVNVSSAAGLVALP---------  146 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC----CCCcEEEEEccccccCCCC---------
Confidence            999999997533  3456778999999999999999999999999753    1357999999988776544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch------h---HHHHHHHHhhhhcCC
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS------F---FSGLVGLLGKYVIKN  258 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~------~---~~~~~~~~~~~~~~~  258 (319)
                            .+..|+++|+++.+|++.++.++.+.|  |+|++|+||.++|++.....      .   ...+.... ..+..+
T Consensus       147 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  217 (272)
T PRK07832        147 ------WHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRF-RGHAVT  217 (272)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhcccccccCcchhhHHHHHHhc-ccCCCC
Confidence                  367899999999999999999999988  99999999999999865431      0   11111111 223569


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      |+++|+.+++++.  ...+++|.-+.
T Consensus       218 ~~~vA~~~~~~~~--~~~~~~~~~~~  241 (272)
T PRK07832        218 PEKAAEKILAGVE--KNRYLVYTSPD  241 (272)
T ss_pred             HHHHHHHHHHHHh--cCCeEEecCcc
Confidence            9999999999993  44555665443

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-32  Score=237.79  Aligned_cols=228  Identities=26%  Similarity=0.281  Sum_probs=188.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||+++||++++++|+++|++|++++|+++..++..+.+...  +.++.++.+|+++++++.++++++.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998877777766543  45788999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||+|....  ..+.+.++++..+++|+.+++.+++.+++.|.+.     ..++||++||..+..+.+       
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~-------  150 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-----GGGLIINVSSIAARNAFP-------  150 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCcCCC-------
Confidence            99999999997543  2345678899999999999999999999999764     367999999998876533       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                              ++..|+.+|++++.+++.++.++++.|  |++++|+||+++|++........    ........+|+++|+.
T Consensus       151 --------~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~~~~~~----~~~~~~~~~~~~va~~  216 (241)
T PRK07454        151 --------QWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDTETVQA----DFDRSAMLSPEQVAQT  216 (241)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCccccccccc----ccccccCCCHHHHHHH
Confidence                    467899999999999999999999988  99999999999999855321111    1112345689999999


Q ss_pred             HHHHhcCCCccCCCcccc
Q 020927          266 TCYVALHPHVKGLTGSYF  283 (319)
Q Consensus       266 i~~l~~s~~~~~~~G~~~  283 (319)
                      +++++..+....+.+..+
T Consensus       217 ~~~l~~~~~~~~~~~~~~  234 (241)
T PRK07454        217 ILHLAQLPPSAVIEDLTL  234 (241)
T ss_pred             HHHHHcCCccceeeeEEe
Confidence            999996554444433333

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=238.72  Aligned_cols=218  Identities=23%  Similarity=0.248  Sum_probs=185.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||+||||++++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++++++.++++++.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999998888888777655  5678899999999999999999999988999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||||+...  ..+.+.+++++++++|+.+++.+++.++|.|.+.     ..++||++||..+..+.+         
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~---------  144 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-----KSGRIVNIASMAGLMQGP---------  144 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhcCCCC---------
Confidence            999999998654  3456678899999999999999999999999764     357999999998887544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCCHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~va  263 (319)
                            ++..|+++|+++++++++|+.++.+.|  |++++|+||+++|++.....    ...............+++++|
T Consensus       145 ------~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  216 (270)
T PRK05650        145 ------AMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIA  216 (270)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHH
Confidence                  368999999999999999999999988  99999999999999876542    111222222233346899999


Q ss_pred             HHHHHHhc
Q 020927          264 ATTCYVAL  271 (319)
Q Consensus       264 ~~i~~l~~  271 (319)
                      +.++..+.
T Consensus       217 ~~i~~~l~  224 (270)
T PRK05650        217 DYIYQQVA  224 (270)
T ss_pred             HHHHHHHh
Confidence            99999995

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=7e-32  Score=267.93  Aligned_cols=244  Identities=23%  Similarity=0.248  Sum_probs=199.5

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+....+..++..+.+|+++++++.+++++
T Consensus       407 ~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            34456889999999999999999999999999999999999988887777776554445788899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|+||||||+...  ..+.+.+.|+..+++|+.+++.+++.+++.|++..    ..++||++||..+..+.| 
T Consensus       487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~----~~g~IV~iSS~~a~~~~~-  561 (676)
T TIGR02632       487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQG----LGGNIVFIASKNAVYAGK-  561 (676)
T ss_pred             HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEEeChhhcCCCC-
Confidence            99999999999999997543  33556788999999999999999999999997641    257999999988877544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC--cccCc-------------hh-
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN--LFRNI-------------SF-  243 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~--~~~~~-------------~~-  243 (319)
                                    +...|++||++++.+++.++.++++.|  |+||+|+||.+.++  +....             .. 
T Consensus       562 --------------~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~  625 (676)
T TIGR02632       562 --------------NASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADEL  625 (676)
T ss_pred             --------------CCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceecCcccccccchhhhhhcccCChHHH
Confidence                          367999999999999999999999999  99999999998643  32210             00 


Q ss_pred             HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          244 FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ...+....+..+..+|+|+|+++++++ ++...++||+++..+|
T Consensus       626 ~~~~~~r~~l~r~v~peDVA~av~~L~-s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       626 EEHYAKRTLLKRHIFPADIAEAVFFLA-SSKSEKTTGCIITVDG  668 (676)
T ss_pred             HHHHHhcCCcCCCcCHHHHHHHHHHHh-CCcccCCcCcEEEECC
Confidence            011222233445678999999999998 5677899999888443

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=235.25  Aligned_cols=235  Identities=26%  Similarity=0.269  Sum_probs=190.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR----NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ++++|+++||||++|||++++++|+++|++|++++|    +.+..+...+++...  +.++.++.+|+++++++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            467899999999999999999999999999988665    444444444444333  45789999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHH-HHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLL-ETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.+.++++|++|||+|....  ..+.+.+++...+++|+.+++.+++.+. +.+++.     ..+++|++||..+..+.+
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~  155 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-----RGGRIVNIASVAGVRGNR  155 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-----CCeEEEEECCchhcCCCC
Confidence            98888899999999998653  3356678899999999999999999999 555543     357999999988876433


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (319)
                                     ++..|+.+|++++.+++.++.++.+.|  +++++++||+++|++..............+.....+
T Consensus       156 ---------------~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (249)
T PRK12827        156 ---------------GQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGE  218 (249)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcC
Confidence                           467899999999999999999999888  999999999999998665432222333334444568


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccC
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      ++++++.+++++ ++....++|+++.-
T Consensus       219 ~~~va~~~~~l~-~~~~~~~~g~~~~~  244 (249)
T PRK12827        219 PDEVAALVAFLV-SDAASYVTGQVIPV  244 (249)
T ss_pred             HHHHHHHHHHHc-CcccCCccCcEEEe
Confidence            999999999999 56778889998773

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=239.58  Aligned_cols=210  Identities=22%  Similarity=0.274  Sum_probs=178.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+...  + ++.++.+|+++++++.++++++.++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999988777665554322  2 7899999999999999999999999999


Q ss_pred             ccEEEEccccCCCC--c-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          109 LNILINNAGIMATP--F-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       109 id~lv~nag~~~~~--~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      +|++|||+|+....  . +.+.+.++.++++|+.+++.+++.++|.|.+.     +.++||++||..+..+.|       
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-----~~~~iv~isS~~~~~~~~-------  146 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-----RRGTLVGIASVAGVRGLP-------  146 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcCCCC-------
Confidence            99999999986432  1 25668899999999999999999999999764     368999999999887544       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                              ....|++||++++.++++++.++.+.|  |+|++|+||++.|++......        ......+|+++++.
T Consensus       147 --------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~a~~  208 (257)
T PRK07024        147 --------GAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAHNPY--------PMPFLMDADRFAAR  208 (257)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhcCCC--------CCCCccCHHHHHHH
Confidence                    367899999999999999999999989  999999999999997653211        11123589999999


Q ss_pred             HHHHhc
Q 020927          266 TCYVAL  271 (319)
Q Consensus       266 i~~l~~  271 (319)
                      ++..+.
T Consensus       209 ~~~~l~  214 (257)
T PRK07024        209 AARAIA  214 (257)
T ss_pred             HHHHHh
Confidence            999984

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-31  Score=236.42  Aligned_cols=229  Identities=22%  Similarity=0.225  Sum_probs=191.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC--CHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS--SLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~v~~~~~~i~  103 (319)
                      -+++|++|||||+++||.+++++|+++|++|++++|+.+..++..+++.... ..++.++.+|+.  +++++.++++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999988877777765542 346777778875  7899999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|+||||||....   ..+.+.+.+++.+++|+.+++.+++.+++.|.++     +.++||++||..+..+.+  
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~~~~--  160 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-----PAASLVFTSSSVGRQGRA--  160 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-----CCCEEEEEccHhhcCCCC--
Confidence            989999999999997543   3356678899999999999999999999999764     467999999988776433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   ++..|++||++++.+++.++.++...|  |++++++||.+.|++.....  ..    .....+.+|+
T Consensus       161 -------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~~~~--~~----~~~~~~~~~~  219 (247)
T PRK08945        161 -------------NWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRASAF--PG----EDPQKLKTPE  219 (247)
T ss_pred             -------------CCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchhhhc--Cc----ccccCCCCHH
Confidence                         467899999999999999999999888  99999999999998643221  00    0122457899


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ++++.+++++ ++...+++|+.+.
T Consensus       220 ~~~~~~~~~~-~~~~~~~~g~~~~  242 (247)
T PRK08945        220 DIMPLYLYLM-GDDSRRKNGQSFD  242 (247)
T ss_pred             HHHHHHHHHh-CccccccCCeEEe
Confidence            9999999998 6888899999765

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-31  Score=235.87  Aligned_cols=240  Identities=23%  Similarity=0.262  Sum_probs=191.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|++|||||++|||++++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999864 3444444544433  45789999999999999999999999999


Q ss_pred             CccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccC-CCCCeEEEeCCcccccCCCCCCc
Q 020927          108 PLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARES-SKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       108 ~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|||+|....    ..+.+.+.+++.+++|+.+++.+++.+++.|.++.... ...++||++||..+..+.+    
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  155 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----  155 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence            99999999997543    23456788999999999999999999999998642110 1146799999998876533    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-hHHHHHH--HHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVG--LLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~--~~~~~~~~~~  259 (319)
                                 +...|+.+|++++.+++.++.++.++|  |++++|+||.+.|++..... .......  ..+...+.+|
T Consensus       156 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK12745        156 -----------NRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEP  222 (256)
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCH
Confidence                       357899999999999999999999888  99999999999998865431 1111111  1233445689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +++++.+.+++ ++...+++|+.+..+|.
T Consensus       223 ~d~a~~i~~l~-~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        223 EDVARAVAALA-SGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             HHHHHHHHHHh-CCcccccCCCEEEECCC
Confidence            99999999998 57777889998875543

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-31  Score=239.37  Aligned_cols=229  Identities=24%  Similarity=0.198  Sum_probs=185.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988877777776544  557889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|+||||||....  ..+.+.+.|+..+++|+.+++.+++.++|.|.+.... ....++||++||.++..+.|    
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  156 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP----  156 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence            9999999999998654  2346678899999999999999999999999875311 01127999999998887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----------------HH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----------------FS  245 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----------------~~  245 (319)
                                 ++..|+++|++++.|+++++.++...+..|+++.++||++.|++......                 ..
T Consensus       157 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (287)
T PRK06194        157 -----------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQ  225 (287)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHH
Confidence                       36789999999999999999999865555999999999999988643210                 00


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhc
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~  271 (319)
                      ............+++|+|+.++.++.
T Consensus       226 ~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        226 AMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             HHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            11111111123699999999999873

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=235.68  Aligned_cols=234  Identities=31%  Similarity=0.356  Sum_probs=189.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++++++||||++|||.++|++|+++|++|++. .|+.+..++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999998774 78887777666665433  45688999999999999999999987


Q ss_pred             cC------CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          105 SG------LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       105 ~~------~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .+      +++|++|||||....  ..+.+.+.|+..+++|+.+++++++.+++.|.+       .+++|++||..+..+
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~~  153 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLG  153 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcCC
Confidence            66      479999999997644  234567788999999999999999999999854       469999999888765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHH-HHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGL-VGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~-~~~~~  252 (319)
                      .|               ++..|++||++++.++++++.++.+.+  +++++++||++.|++......   .... .....
T Consensus       154 ~~---------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  216 (254)
T PRK12746        154 FT---------------GSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSV  216 (254)
T ss_pred             CC---------------CCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhhhccChhHHHHHHhcCC
Confidence            44               367899999999999999999999888  999999999999998654311   1111 11222


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .....+++|+++.+.+++ ++...+++|+.+.-+
T Consensus       217 ~~~~~~~~dva~~~~~l~-~~~~~~~~g~~~~i~  249 (254)
T PRK12746        217 FGRIGQVEDIADAVAFLA-SSDSRWVTGQIIDVS  249 (254)
T ss_pred             cCCCCCHHHHHHHHHHHc-CcccCCcCCCEEEeC
Confidence            345568999999999988 566677889876633

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.2e-31  Score=222.95  Aligned_cols=240  Identities=17%  Similarity=0.189  Sum_probs=209.7

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.|+||++||+|-.  ..|+++||+.|.++|++++++..++ ++++-.+++.++.  .....++||+++.++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHH
Confidence            57899999999987  7999999999999999999999987 6666666665553  23677899999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .+++|++|+|||+.++...      ..+.+.|++...+++..++...+++++.|.|..       .|.||.++-..+...
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r~  151 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSERV  151 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEeccceee
Confidence            9999999999999998642      336788999999999999999999999999965       789999999999888


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----Hh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----LG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~  252 (319)
                      .|.               |...+.+|+++++-+|.||.+++++|  ||||.|+.|+++|-....+..+..+.+.    .|
T Consensus       152 vPn---------------YNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aP  214 (259)
T COG0623         152 VPN---------------YNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKMLKENEANAP  214 (259)
T ss_pred             cCC---------------CchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHHHHHHHhhCC
Confidence            776               56889999999999999999999999  9999999999999877777656555543    46


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      ..+.+++|||+++.+||+ |+.++++||+.+. |.|.....
T Consensus       215 l~r~vt~eeVG~tA~fLl-SdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         215 LRRNVTIEEVGNTAAFLL-SDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             ccCCCCHHHhhhhHHHHh-cchhcccccceEEEcCCceeec
Confidence            777889999999999999 7999999999776 77776544

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=238.16  Aligned_cols=219  Identities=24%  Similarity=0.267  Sum_probs=179.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+|++|||||+||||++++++|+++|++|++++|+++.++.+.+.    . +.++.++.+|+++++++.++++++.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999998776544332    1 44788999999999999999999999899


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||||....  ..+.+.+.+.+.+++|+.+++.+++.++|+|++.     ..++||++||.++..+.|       
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~iSS~~~~~~~~-------  145 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-----RRGHIVNITSMGGLITMP-------  145 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-----CCCEEEEEecccccCCCC-------
Confidence            99999999998543  3355678899999999999999999999999764     367999999998887544       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHH-------HH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLV-------GL  250 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~-------~~  250 (319)
                              ++..|+++|++++.++++++.++...|  +++++|+||.+.|++....        .......       ..
T Consensus       146 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (277)
T PRK06180        146 --------GIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREA  215 (277)
T ss_pred             --------CcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHh
Confidence                    468899999999999999999999988  9999999999999864321        1111111       11


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCC
Q 020927          251 LGKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      .....+.+|+++|+.+++++..+
T Consensus       216 ~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        216 KSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             hccCCCCCHHHHHHHHHHHHcCC
Confidence            12233568999999999998533

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=239.25  Aligned_cols=216  Identities=25%  Similarity=0.255  Sum_probs=176.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC-
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG-  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~-  106 (319)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++++.+        ..+.++.+|+++.++++++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999999999999877654321        247789999999999999999987655 


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++++..+++|+.|++.+++.++|.|.+.     ..++||++||..+..+.|      
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~------  143 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSILGLVPMK------  143 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECChhhcCCCC------
Confidence            689999999997544  3356678899999999999999999999999874     367999999998877544      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-H------------HHH---
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-S------------GLV---  248 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-~------------~~~---  248 (319)
                               +...|++||++++.|+++|+.|+++.|  |+|++|+||+++|++..+.... .            .+.   
T Consensus       144 ---------~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (277)
T PRK05993        144 ---------YRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQM  212 (277)
T ss_pred             ---------ccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHH
Confidence                     367899999999999999999999999  9999999999999986643100 0            000   


Q ss_pred             HHH-----hhhhcCCHHHHHHHHHHHhcCC
Q 020927          249 GLL-----GKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       249 ~~~-----~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ...     ......+|+++|+.++..+.++
T Consensus       213 ~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        213 ARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             HHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            000     1122458999999999999543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=1.7e-31  Score=221.80  Aligned_cols=232  Identities=26%  Similarity=0.323  Sum_probs=184.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC-CE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRG-VH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G-~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |..|+++||||++|||+.++++|.+.. .. ++.+.|+++++.+..+....  ...|++.+++|+++.+++.+++.++.+
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHh
Confidence            356779999999999999999999874 44 55667888876222222111  167999999999999999999999988


Q ss_pred             c--CCCccEEEEccccCCCCc---ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccC------CCCCeEEEeCCccc
Q 020927          105 S--GLPLNILINNAGIMATPF---MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARES------SKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~--~~~id~lv~nag~~~~~~---~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~------~~~~~ii~isS~~~  173 (319)
                      -  ..++|+||+|||+..+..   +.+.+.|.+.+++|..|+..+.|.++|.+++.+...      .....|||+||.++
T Consensus        79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            6  568999999999976532   455677999999999999999999999998764321      13457999998886


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      -...-            ...++.+|..||+|+++|+|+++.++++++  |-|..+|||+|+|+|.....           
T Consensus       159 s~~~~------------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~a-----------  213 (249)
T KOG1611|consen  159 SIGGF------------RPGGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKKA-----------  213 (249)
T ss_pred             ccCCC------------CCcchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCCc-----------
Confidence            64210            122478999999999999999999999998  99999999999999976431           


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                        ..+||+.+..++... ...-..-+|.|+..++.
T Consensus       214 --~ltveeSts~l~~~i-~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  214 --ALTVEESTSKLLASI-NKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             --ccchhhhHHHHHHHH-HhcCcccCcceEccCCC
Confidence              247999999999888 46666778998886554

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=233.57  Aligned_cols=233  Identities=28%  Similarity=0.325  Sum_probs=188.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..++++++++++||||+++||+++++.|+++|++|++++|+.+..++..+..       ...++.+|+++.+++.++++.
T Consensus         2 ~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          2 NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             CcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999987765544322       356788999999998887775


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                          .+++|++|||+|....  ..+.+.+++++.+++|+.+++.+++.+++.+.+.    +..++||++||..+..+.+ 
T Consensus        75 ----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~-  145 (245)
T PRK07060         75 ----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA----GRGGSIVNVSSQAALVGLP-  145 (245)
T ss_pred             ----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----CCCcEEEEEccHHHcCCCC-
Confidence                4689999999998543  2345678899999999999999999999998753    1247999999998877543 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (319)
                                    .+..|+.+|++++.+++.++.++.+.|  |++++++||++.|++....    .....+....+...
T Consensus       146 --------------~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (245)
T PRK07060        146 --------------DHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGR  209 (245)
T ss_pred             --------------CCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCC
Confidence                          367899999999999999999999888  9999999999999975421    11122223344556


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +.+++|+++.+++++ ++....++|+++. ++|
T Consensus       210 ~~~~~d~a~~~~~l~-~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        210 FAEVDDVAAPILFLL-SDAASMVSGVSLPVDGG  241 (245)
T ss_pred             CCCHHHHHHHHHHHc-CcccCCccCcEEeECCC
Confidence            789999999999999 5777889999888 444

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=234.95  Aligned_cols=231  Identities=22%  Similarity=0.251  Sum_probs=181.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |++|||||++|||++++++|+++|++|++++|++ +.++...    ... +.+++++.+|++++++++++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA----EQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH----hcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999986 3333222    211 457889999999999999999998776543


Q ss_pred             ----ccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          109 ----LNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       109 ----id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                          ..++|+|+|...+   ..+.+.+.|.+.+++|+.+++.+++.++|.|.+.    +..++||++||..+..+.|   
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~iv~~sS~~~~~~~~---  149 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW----KVDKRVINISSGAAKNPYF---  149 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc----CCCceEEEecchhhcCCCC---
Confidence                2289999997543   3356788999999999999999999999999763    1257999999988776433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGK  253 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~  253 (319)
                                  ++..|+++|++++.+++.++.+++....+|+|++|.||+++|++....        .....+....+.
T Consensus       150 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (251)
T PRK06924        150 ------------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEE  217 (251)
T ss_pred             ------------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhc
Confidence                        478999999999999999999986432239999999999999975431        011223333345


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .++.+|+++|+.+++++. +. .+++|+++..+
T Consensus       218 ~~~~~~~dva~~~~~l~~-~~-~~~~G~~~~v~  248 (251)
T PRK06924        218 GKLLSPEYVAKALRNLLE-TE-DFPNGEVIDID  248 (251)
T ss_pred             CCcCCHHHHHHHHHHHHh-cc-cCCCCCEeehh
Confidence            567899999999999994 43 78899987643

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-31  Score=233.80  Aligned_cols=233  Identities=25%  Similarity=0.303  Sum_probs=192.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+.+.    +.++.++.+|+.+.+++..+++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888777666552    457889999999999999999999998899


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||+|....  ..+.+.+.|...+++|+.+++.+++.+++.+.++     ..++||++||..+...          
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~----------  142 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-----SRGAVVNIGSVNGMAA----------  142 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhcCC----------
Confidence            9999999998643  2345678889999999999999999999998764     3679999999765531          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhHHHHHHHHhhhhcCCHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~  261 (319)
                           + +.+.|+.+|++++.++++++.++++.|  |+|++++||++.|++....     .+........+...+..++|
T Consensus       143 -----~-~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  214 (257)
T PRK07074        143 -----L-GHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDD  214 (257)
T ss_pred             -----C-CCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHH
Confidence                 1 246899999999999999999999999  9999999999999875432     11122222233455689999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +++++++++ ++...+++|+++. ++|..
T Consensus       215 ~a~~~~~l~-~~~~~~~~g~~~~~~~g~~  242 (257)
T PRK07074        215 VANAVLFLA-SPAARAITGVCLPVDGGLT  242 (257)
T ss_pred             HHHHHHHHc-CchhcCcCCcEEEeCCCcC
Confidence            999999999 5777889999886 55543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=5.1e-31  Score=232.03  Aligned_cols=234  Identities=28%  Similarity=0.316  Sum_probs=195.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||+++||++++++|+++|++|++++|+.++.....+.+...  +.++.++.+|+++++++.++++++.+.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999988877777777554  4568899999999999999999999989


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCCCCCcC
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGIRF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p~~~~~  183 (319)
                      +++|++|||+|....  ....+.+++.+.+++|+.+++.+++.+++.|.+.     +.+++|++||..+. .+.+     
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~ii~~ss~~~~~~~~~-----  151 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-----GGGRIVLTSSVAGPRVGYP-----  151 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechHhhccCCC-----
Confidence            999999999997654  2245678899999999999999999999999764     36799999998877 4322     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHHHHHHhhhhcCCHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~  260 (319)
                                ++..|+.+|++++.+++.++.++...|  ++++.++||.+.|+.......   ...+....+...+.+++
T Consensus       152 ----------~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK12826        152 ----------GLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPE  219 (251)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHH
Confidence                      367899999999999999999998888  999999999999997654421   11222223434567899


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccC
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      |+|+.+++++ ++...+++|+.+.-
T Consensus       220 dva~~~~~l~-~~~~~~~~g~~~~~  243 (251)
T PRK12826        220 DIAAAVLFLA-SDEARYITGQTLPV  243 (251)
T ss_pred             HHHHHHHHHh-CccccCcCCcEEEE
Confidence            9999999988 56667789998773

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=5.5e-31  Score=231.40  Aligned_cols=237  Identities=28%  Similarity=0.335  Sum_probs=191.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |++|||||+++||++++++|+++|++|++ ..|+.+..++....+...  +.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999876 467877777666666543  456888999999999999999999988999


Q ss_pred             ccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          109 LNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       109 id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      +|++|||+|....   ..+.+.++++..+++|+.+++.+++.+++.+.+..  ...+++||++||..+..+.|.      
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~g~~v~~sS~~~~~~~~~------  151 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH--GGSGGAIVNVSSAASRLGAPG------  151 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CCCCcEEEEECchhhccCCCC------
Confidence            9999999997533   23456678999999999999999999999987642  123578999999888765443      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHHHHHHhhhhcCCHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~v  262 (319)
                              .+..|+++|++++.+++.++.++.+.|  |++++++||.+.|++......   ........+..+..+|+++
T Consensus       152 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  221 (247)
T PRK09730        152 --------EYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEV  221 (247)
T ss_pred             --------cccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                    235799999999999999999999888  999999999999997543221   1222222333345689999


Q ss_pred             HHHHHHHhcCCCccCCCcccccCCc
Q 020927          263 AATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      |+.+++++ ++....++|+++..+|
T Consensus       222 a~~~~~~~-~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        222 AQAIVWLL-SDKASYVTGSFIDLAG  245 (247)
T ss_pred             HHHHHhhc-ChhhcCccCcEEecCC
Confidence            99999998 4666779999887554

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=235.74  Aligned_cols=211  Identities=18%  Similarity=0.125  Sum_probs=175.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++|++|||||++|||+++|++|+++| ++|++++|+++. +++..+++.... ..+++++.+|+++++++.++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            67999999999999999999999996 899999999876 777777776542 34789999999999999999999876 


Q ss_pred             CCCccEEEEccccCCCCcc--cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|++|||+|+......  .+.+...+.+++|+.+++.+++.++|.|.++     ..++||++||..+..+.+     
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~g~~~~~-----  154 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVAGERVRR-----  154 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechhhcCCCC-----
Confidence            4799999999998644211  1223344679999999999999999999874     368999999998765433     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                                +...|++||+++.+|+++|+.++.++|  |+|++|+||+++|++......         .....+|+++|
T Consensus       155 ----------~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~A  213 (253)
T PRK07904        155 ----------SNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHAKE---------APLTVDKEDVA  213 (253)
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccCCC---------CCCCCCHHHHH
Confidence                      356799999999999999999999999  999999999999998764321         11246899999


Q ss_pred             HHHHHHhc
Q 020927          264 ATTCYVAL  271 (319)
Q Consensus       264 ~~i~~l~~  271 (319)
                      +.++..+.
T Consensus       214 ~~i~~~~~  221 (253)
T PRK07904        214 KLAVTAVA  221 (253)
T ss_pred             HHHHHHHH
Confidence            99999995

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-31  Score=230.89  Aligned_cols=221  Identities=25%  Similarity=0.279  Sum_probs=186.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++++++||||+++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4467899999999999999999999999999999999988877777776543  55799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||+|....  ..+.+.+++++.+++|+.+++.+.+.+.+.+.+.     ..+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~----  151 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-----QSGDIINISSTAGQKGAA----  151 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEEcchhhccCCC----
Confidence            99999999999997543  2345678899999999999999999999999764     367999999998887533    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 ++..|+.+|+++..+++.++.++.+.|  |++++|+||.+.|++........    . ....+.+++++
T Consensus       152 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~----~-~~~~~~~~~~~  213 (239)
T PRK07666        152 -----------VTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVDLGLTD----G-NPDKVMQPEDL  213 (239)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhhccccc----c-CCCCCCCHHHH
Confidence                       367899999999999999999999988  99999999999999765331110    0 12234689999


Q ss_pred             HHHHHHHhcCCC
Q 020927          263 AATTCYVALHPH  274 (319)
Q Consensus       263 a~~i~~l~~s~~  274 (319)
                      |+.++.++..+.
T Consensus       214 a~~~~~~l~~~~  225 (239)
T PRK07666        214 AEFIVAQLKLNK  225 (239)
T ss_pred             HHHHHHHHhCCC
Confidence            999999996543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-31  Score=231.32  Aligned_cols=213  Identities=23%  Similarity=0.252  Sum_probs=184.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++....+....++.++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999999888888777777666778999999999999999999999999999


Q ss_pred             ccEEEEccccCCCC--cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||||+....  ...+.+.+.+.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.|.       
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~-------  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-----GSGHLVLISSVSAVRGLPG-------  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEEeccccccCCCC-------
Confidence            99999999986442  234557788999999999999999999999764     3679999999888765442       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                             ++..|+.||++++.+++.++.++...+  |++++|+||+++|++......         .....+++++|+.+
T Consensus       150 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~a~~i  211 (248)
T PRK08251        150 -------VKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKAKS---------TPFMVDTETGVKAL  211 (248)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcccc---------CCccCCHHHHHHHH
Confidence                   257899999999999999999999888  999999999999998664321         12346899999999


Q ss_pred             HHHhc
Q 020927          267 CYVAL  271 (319)
Q Consensus       267 ~~l~~  271 (319)
                      +..+.
T Consensus       212 ~~~~~  216 (248)
T PRK08251        212 VKAIE  216 (248)
T ss_pred             HHHHh
Confidence            99884

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=9.6e-31  Score=229.61  Aligned_cols=238  Identities=29%  Similarity=0.359  Sum_probs=193.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |++++|++|||||+++||+++++.|+++|++|+++.|+.. ..+...+.+...  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988877654 344555545433  5678999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||+|....  ..+.+.+.+.+.+++|+.+++.+.+.+++.+.+.     +.+++|++||..+..+.+   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~iss~~~~~~~~---  150 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-----RSGRIINISSVVGLMGNP---  150 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEEcccccCcCCC---
Confidence            888899999999997654  2345668899999999999999999999998763     357899999987776433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (319)
                                  +...|+.+|++++.+++.++.++...+  +++++++||+++|++.....  .........+.....++
T Consensus       151 ------------~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (248)
T PRK05557        151 ------------GQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQP  216 (248)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCH
Confidence                        367899999999999999999998888  99999999999998866542  11222222333445789


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++++.+.+++ ++....++|+.+.-+|
T Consensus       217 ~~va~~~~~l~-~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        217 EEIASAVAFLA-SDEAAYITGQTLHVNG  243 (248)
T ss_pred             HHHHHHHHHHc-CcccCCccccEEEecC
Confidence            99999999988 5667788999877444

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.1e-30  Score=230.22  Aligned_cols=218  Identities=22%  Similarity=0.323  Sum_probs=177.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++++||||++|||.+++++|+++|++|++++|+++.++...+.+     +.++.++.+|+++.+++.++++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999988776655443     4468899999999999999999999888999


Q ss_pred             cEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          110 NILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       110 d~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |++|||||+..   +..+.+.+++++++++|+.+++.+++.+++.|.+.     ..++||++||..+..+.+        
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~--------  142 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSWPYA--------  142 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECCcccCCCCC--------
Confidence            99999999743   23356778999999999999999999999999764     357999999988776433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhcCCHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~va  263 (319)
                             +...|+.+|++++.+++.++.++.+.|  |++++|+||++.|.+.....   ...............+|+++|
T Consensus       143 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  213 (248)
T PRK10538        143 -------GGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVS  213 (248)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHH
Confidence                   467899999999999999999999999  99999999999855432211   111111111222346899999


Q ss_pred             HHHHHHhcCCC
Q 020927          264 ATTCYVALHPH  274 (319)
Q Consensus       264 ~~i~~l~~s~~  274 (319)
                      +.+++++..+.
T Consensus       214 ~~~~~l~~~~~  224 (248)
T PRK10538        214 EAVWWVATLPA  224 (248)
T ss_pred             HHHHHHhcCCC
Confidence            99999995443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=3.7e-31  Score=252.73  Aligned_cols=233  Identities=28%  Similarity=0.294  Sum_probs=189.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++|+++|||||++|||++++++|+++|++|+++++..  +.+++..+.+       ...++.+|++++++++++++.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998843  3333322221       24578899999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||||+...  ..+.+.+.|+..+++|+.+++.+.+.+++.+...     +.++||++||..+..+.+   
T Consensus       280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~g~iv~~SS~~~~~g~~---  351 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-----DGGRIVGVSSISGIAGNR---  351 (450)
T ss_pred             HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcCCCC---
Confidence            989999999999998654  2356778999999999999999999999965432     368999999998876543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-HHHHH-HHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-SGLVG-LLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~-~~~~~~~~~~  259 (319)
                                  ++..|+++|+++++|++.++.++...|  |++|+|+||+++|++....+.. ....+ ..+......|
T Consensus       352 ------------~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p  417 (450)
T PRK08261        352 ------------GQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLP  417 (450)
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCH
Confidence                        368899999999999999999999999  9999999999999987654322 11111 1122334689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +|+|++++|++ ++...++||+.+..+|.
T Consensus       418 ~dva~~~~~l~-s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        418 VDVAETIAWLA-SPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HHHHHHHHHHh-ChhhcCCCCCEEEECCC
Confidence            99999999998 68889999999886654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.1e-31  Score=233.35  Aligned_cols=218  Identities=25%  Similarity=0.279  Sum_probs=182.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++++++|||||++|||++++++|+++|++|++++|+.+.+++...++ . . +.++.++.+|+++++++.++++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-Y-PGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-c-CCceEEEEccCCCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999999998887776666 2 2 45789999999999999999999876


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                       ++++|++|||||....  ..+.+.+++.+.+++|+.+++.+++.++|+|.+.     +.++||++||..+..+.|    
T Consensus        78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~----  147 (263)
T PRK09072         78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-----PSAMVVNVGSTFGSIGYP----  147 (263)
T ss_pred             -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEecChhhCcCCC----
Confidence             7899999999997543  2345678899999999999999999999999764     357999999988876544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 +...|+.+|+++.+++++++.++.+.|  |+|++|+||+++|++....  ........ .....+|+++
T Consensus       148 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~~--~~~~~~~~-~~~~~~~~~v  211 (263)
T PRK09072        148 -----------GYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSEA--VQALNRAL-GNAMDDPEDV  211 (263)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhhh--cccccccc-cCCCCCHHHH
Confidence                       367899999999999999999999988  9999999999999875432  11111111 1235689999


Q ss_pred             HHHHHHHhc
Q 020927          263 AATTCYVAL  271 (319)
Q Consensus       263 a~~i~~l~~  271 (319)
                      |+.+++++.
T Consensus       212 a~~i~~~~~  220 (263)
T PRK09072        212 AAAVLQAIE  220 (263)
T ss_pred             HHHHHHHHh
Confidence            999999995

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.5e-31  Score=232.39  Aligned_cols=216  Identities=23%  Similarity=0.203  Sum_probs=179.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc-CCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS-GLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~-~~~  108 (319)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+.+.    +.++.++++|+++.+++.++++++.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999887776655442    457899999999999999999998776 789


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||....  ..+.+.++++.++++|+.+++.+++.+.+.|+..     ..++||++||..+..+.+        
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~--------  144 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-----PGARVINTSSASAIYGQP--------  144 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEeCchhhCcCCC--------
Confidence            9999999998654  3345678899999999999999999999999764     368999999998877543        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                             ....|+.||++++.++++++.++.+.|  |++++|+||+++|++....................+|+++|+.+
T Consensus       145 -------~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  215 (260)
T PRK08267        145 -------GLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAV  215 (260)
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHH
Confidence                   367899999999999999999999988  99999999999999876411001111111122346899999999


Q ss_pred             HHHhc
Q 020927          267 CYVAL  271 (319)
Q Consensus       267 ~~l~~  271 (319)
                      +.++.
T Consensus       216 ~~~~~  220 (260)
T PRK08267        216 WAAVQ  220 (260)
T ss_pred             HHHHh
Confidence            99984

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-30  Score=233.13  Aligned_cols=224  Identities=26%  Similarity=0.296  Sum_probs=184.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|++|||||+|+||+++++.|+++|++|++++|+.+..+...+.+.....+.++.++.+|+++++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999999988887776666554334679999999999999999 89988888


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|++|||||....  ..+.+.+.+++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.+      
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~vsS~~~~~~~~------  148 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-----KSGKIINISSISGRVGFP------  148 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECcccccCCCC------
Confidence            999999999997654  2345668899999999999999999999999764     367999999988776433      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---------------hHHHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---------------FFSGLVG  249 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---------------~~~~~~~  249 (319)
                               ++..|+.+|++++.|+++++.++.++|  |++++++||+++|++.....               .......
T Consensus       149 ---------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (280)
T PRK06914        149 ---------GLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK  217 (280)
T ss_pred             ---------CCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH
Confidence                     467899999999999999999999999  99999999999999754210               0011111


Q ss_pred             H--HhhhhcCCHHHHHHHHHHHhcCC
Q 020927          250 L--LGKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       250 ~--~~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      .  .+...+.+|+|+|+++++++.++
T Consensus       218 ~~~~~~~~~~~~~dva~~~~~~~~~~  243 (280)
T PRK06914        218 HINSGSDTFGNPIDVANLIVEIAESK  243 (280)
T ss_pred             HHhhhhhccCCHHHHHHHHHHHHcCC
Confidence            1  12344579999999999999543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.2e-30  Score=228.07  Aligned_cols=236  Identities=24%  Similarity=0.204  Sum_probs=183.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999753 455555555443  45688999999999999999999988


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .++.+|++|||||....    ....+...+++|+.+++.+++.+.|.|.+       .+++|++||..+... +.     
T Consensus        81 ~~~~~d~vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~-~~-----  143 (248)
T PRK07806         81 EFGGLDALVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFI-PT-----  143 (248)
T ss_pred             hCCCCcEEEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcC-cc-----
Confidence            88899999999986422    12245678999999999999999999853       469999999654321 00     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHH-HHHHhhhhcCCHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGL-VGLLGKYVIKNVE  260 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~-~~~~~~~~~~~~~  260 (319)
                          ......+..|+.||++++.+++.++.++++.|  |+||+|.||++.|++.....   ..... ....+...+.+|+
T Consensus       144 ----~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (248)
T PRK07806        144 ----VKTMPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVS  217 (248)
T ss_pred             ----ccCCccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHH
Confidence                00122356899999999999999999999999  99999999999988654320   01111 1223455678999


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      |+|+++++++.   ..+.+|+.+..+|..
T Consensus       218 dva~~~~~l~~---~~~~~g~~~~i~~~~  243 (248)
T PRK07806        218 EFAAEVARAVT---APVPSGHIEYVGGAD  243 (248)
T ss_pred             HHHHHHHHHhh---ccccCccEEEecCcc
Confidence            99999999994   346789977755443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=2.4e-30  Score=226.83  Aligned_cols=238  Identities=28%  Similarity=0.323  Sum_probs=197.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+|++|++|||||+++||++++++|+++|++|++++|+++..+.....+...  +.++.++.+|+++++++.++++++..
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988877766666544  56789999999999999999999988


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++||++|....  ..+.+.+.+...++.|+.+.+.+++.+.+.|.+.     ..++||++||..+..+      
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~~ss~~~~~~------  147 (246)
T PRK05653         79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-----RYGRIVNISSVSGVTG------  147 (246)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEECcHHhccC------
Confidence            88899999999997544  2345677889999999999999999999998764     3579999999877653      


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (319)
                               ..++..|+.+|++++.+++.+++++.+.+  +++++++||.+.+++.....  .........+...+.+++
T Consensus       148 ---------~~~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (246)
T PRK05653        148 ---------NPGQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPE  216 (246)
T ss_pred             ---------CCCCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHH
Confidence                     23467899999999999999999998888  99999999999998875421  112222233444567899


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ++++.+++++ ++....++|+++.-+|
T Consensus       217 dva~~~~~~~-~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        217 EVANAVAFLA-SDAASYITGQVIPVNG  242 (246)
T ss_pred             HHHHHHHHHc-CchhcCccCCEEEeCC
Confidence            9999999999 5777788999888444

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.5e-30  Score=227.96  Aligned_cols=235  Identities=23%  Similarity=0.212  Sum_probs=185.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++++++++|||||+++||++++++|+++|++|++..| +.+........+...  +.++.++.+|+++++++..+++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999887765 444444444444433  4568889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++|||||....  ..+.+.+.++..+++|+.+++.+++.+.|.|.+       .++||++||..++.+.+   
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~---  149 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIRPAY---  149 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccCCCC---
Confidence            989999999999997544  224556678899999999999999999999864       47999999998876543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----HHHHHHH-Hhhhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----FSGLVGL-LGKYV  255 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~-~~~~~  255 (319)
                                  ++..|+++|++++.+++.++.++.+ +  ++++.+.||+++|++......     ....... .....
T Consensus       150 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (252)
T PRK06077        150 ------------GLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGK  214 (252)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCC
Confidence                        4688999999999999999999987 7  999999999999997543210     1111111 12234


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +.+|+|+|+.+++++.+   ...+|+.+. +.|..
T Consensus       215 ~~~~~dva~~~~~~~~~---~~~~g~~~~i~~g~~  246 (252)
T PRK06077        215 ILDPEEVAEFVAAILKI---ESITGQVFVLDSGES  246 (252)
T ss_pred             CCCHHHHHHHHHHHhCc---cccCCCeEEecCCee
Confidence            57999999999999942   345676555 55543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.7e-30  Score=228.59  Aligned_cols=224  Identities=25%  Similarity=0.334  Sum_probs=182.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++..|++|||||+++||++++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467799999999999999999999999999999999987777666555443  457889999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|++|||||....  ..+.+.+.+.+.+++|+.+++.+++.++|.|.+.     ..++||++||..+..+.|     
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~g~iv~isS~~~~~~~~-----  154 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-----RRGDLIFVGSDVALRQRP-----  154 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCceEEEECChHhcCCCC-----
Confidence            8899999999997543  2345667889999999999999999999998753     367999999988876543     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHH------Hhhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGL------LGKYV  255 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~------~~~~~  255 (319)
                                ....|+.+|++++.+++.++.++...|  |++++|+||+++|++....  .........      .....
T Consensus       155 ----------~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (274)
T PRK07775        155 ----------HMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDY  222 (274)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccccc
Confidence                      356899999999999999999998888  9999999999999864432  101111111      11233


Q ss_pred             cCCHHHHHHHHHHHhcCC
Q 020927          256 IKNVEQGAATTCYVALHP  273 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~  273 (319)
                      +..++|+|+++++++..+
T Consensus       223 ~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        223 FLRASDLARAITFVAETP  240 (274)
T ss_pred             ccCHHHHHHHHHHHhcCC
Confidence            578999999999999543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-30  Score=230.52  Aligned_cols=212  Identities=30%  Similarity=0.304  Sum_probs=176.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.          ..++.++.+|++++++++++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999765432          23678999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|+||||||+...  ..+.+.++++..+++|+.+++.+++.++|.|++.     ..++||++||..+..+.|.      
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~------  141 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-----GSGRIINISSVLGFLPAPY------  141 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEECCccccCCCCC------
Confidence            99999999998543  3345678899999999999999999999999874     4689999999988876543      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----h---HHHH----HHHH--h
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----F---FSGL----VGLL--G  252 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~---~~~~----~~~~--~  252 (319)
                               ...|+++|++++.+++.++.++++.|  |++++|+||++.|++..+..    .   ....    ....  .
T Consensus       142 ---------~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (270)
T PRK06179        142 ---------MALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKA  210 (270)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence                     57899999999999999999999999  99999999999999865431    0   0100    0011  1


Q ss_pred             hhhcCCHHHHHHHHHHHhc
Q 020927          253 KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~  271 (319)
                      .....+|+++|+.++.++.
T Consensus       211 ~~~~~~~~~va~~~~~~~~  229 (270)
T PRK06179        211 VKKADAPEVVADTVVKAAL  229 (270)
T ss_pred             cccCCCHHHHHHHHHHHHc
Confidence            1234689999999999995

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=226.69  Aligned_cols=223  Identities=26%  Similarity=0.296  Sum_probs=180.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.+|++|||||+++||++++++|+++|++|++++|+.+.          ..   ...++.+|+++.++++++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            357999999999999999999999999999999998643          00   12477899999999999999998776


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                       ++|++|||+|....  ..+.+.+++.+.+++|+.+++.+.+.++|.|++.     ..++||++||...+ +.|      
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~-~~~------  134 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-----EQGRIVNICSRAIF-GAL------  134 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcccccc-CCC------
Confidence             68999999998654  2245678899999999999999999999999864     36799999998643 222      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----HHHHHHHHhhhhcCCH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~  259 (319)
                               ....|+++|++++.+++.++.++++.|  |++++|+||++.|++......     ........+.....+|
T Consensus       135 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (234)
T PRK07577        135 ---------DRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTP  203 (234)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCH
Confidence                     357899999999999999999999988  999999999999998654311     1112222334445689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +++|+.+++++ ++....++|+++..+|
T Consensus       204 ~~~a~~~~~l~-~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        204 EEVAAAIAFLL-SDDAGFITGQVLGVDG  230 (234)
T ss_pred             HHHHHHHHHHh-CcccCCccceEEEecC
Confidence            99999999999 5666789999888544

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=8.5e-31  Score=228.89  Aligned_cols=221  Identities=20%  Similarity=0.235  Sum_probs=171.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      |++|||||++|||++++++|+++|  ..|++..|+....          ....++.++++|+++.++++++.    ++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~----~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLS----EQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence            579999999999999999999986  5677777754321          11457889999999999988754    3467


Q ss_pred             CccEEEEccccCCC--------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          108 PLNILINNAGIMAT--------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       108 ~id~lv~nag~~~~--------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      ++|+||||||+...        ..+.+.+.|.+.+++|+.+++.+++.++|.|.+.     +.++++++||..+....  
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~~~i~~iss~~~~~~~--  139 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-----ESAKFAVISAKVGSISD--  139 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-----CCceEEEEeeccccccc--
Confidence            89999999998642        1234567788999999999999999999999764     35789999986553311  


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                ....++..|+++|++++.|+++|+.|+.+...+|+||+|+||+++|++.....      ...+.....+|
T Consensus       140 ----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~  203 (235)
T PRK09009        140 ----------NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------QNVPKGKLFTP  203 (235)
T ss_pred             ----------CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------hccccCCCCCH
Confidence                      01234678999999999999999999987423399999999999999865431      12233445689


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +++|+.+++++ ++...+++|+++. ++++
T Consensus       204 ~~~a~~~~~l~-~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        204 EYVAQCLLGII-ANATPAQSGSFLAYDGET  232 (235)
T ss_pred             HHHHHHHHHHH-HcCChhhCCcEEeeCCcC
Confidence            99999999999 5677788999887 4443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.8e-30  Score=224.08  Aligned_cols=231  Identities=23%  Similarity=0.221  Sum_probs=189.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||+++||++++++|+++|++|++++|+++...+..+.+..    ..+..+.+|+++.+++.++++++.
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998776665555433    246678899999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|++||++|....  ....+.+.+.+.+++|+.+++.+++.+++.+.+.     ..++||++||..+..+.|   
T Consensus        78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  149 (239)
T PRK12828         78 RQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-----GGGRIVNIGAGAALKAGP---  149 (239)
T ss_pred             HHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-----CCCEEEEECchHhccCCC---
Confidence            999999999999997543  2345677889999999999999999999998764     367999999998876533   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (319)
                                  .+..|+.+|++++.+++.++.++...+  ++++.+.||.+.|++........      ....+.+++|
T Consensus       150 ------------~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~~~~~~~------~~~~~~~~~d  209 (239)
T PRK12828        150 ------------GMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNRADMPDA------DFSRWVTPEQ  209 (239)
T ss_pred             ------------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchhhcCCch------hhhcCCCHHH
Confidence                        367899999999999999999998888  99999999999998643221000      1122468999


Q ss_pred             HHHHHHHHhcCCCccCCCcccccCCc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+.+++++ ++...+++|+.+..+|
T Consensus       210 va~~~~~~l-~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        210 IAAVIAFLL-SDEAQAITGASIPVDG  234 (239)
T ss_pred             HHHHHHHHh-CcccccccceEEEecC
Confidence            999999999 4556678999887544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.8e-30  Score=227.41  Aligned_cols=211  Identities=25%  Similarity=0.266  Sum_probs=173.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...    .    ..+.++.+|+++++++.++++++.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999987655432    1    246788999999999999999999889999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |++|||||+...  ..+.+.++++..+++|+.+++.+++.++|.|.+.      .++||++||..+..+.|         
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~---------  138 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS------RGLVVNIGSVSGVLVTP---------  138 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCEEEEECCccccCCCC---------
Confidence            999999997543  3356778999999999999999999999999752      57999999998877544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH---------------HHHHHH-
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS---------------GLVGLL-  251 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~---------------~~~~~~-  251 (319)
                            ....|+++|++++.++++++.++++.|  |+|++|+||+++|++........               .+.... 
T Consensus       139 ------~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (274)
T PRK05693        139 ------FAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARAR  210 (274)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHH
Confidence                  357899999999999999999999999  99999999999999876532110               000000 


Q ss_pred             -hhhhcCCHHHHHHHHHHHhc
Q 020927          252 -GKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 -~~~~~~~~~~va~~i~~l~~  271 (319)
                       ......+|+++|+.++..+.
T Consensus       211 ~~~~~~~~~~~~a~~i~~~~~  231 (274)
T PRK05693        211 ASQDNPTPAAEFARQLLAAVQ  231 (274)
T ss_pred             hccCCCCCHHHHHHHHHHHHh
Confidence             01123579999999999985

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.9e-29  Score=221.38  Aligned_cols=236  Identities=29%  Similarity=0.298  Sum_probs=190.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+. ...+...+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999987766644 3444444444433  45788999999999999999999988


Q ss_pred             cCCCccEEEEccccCCCC--cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++||++|.....  .+.+.+.+.+.+++|+.+.+.+++.+++.+.+.     ..+++|++||..+..+.+    
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~i~~SS~~~~~~~~----  151 (249)
T PRK12825         81 RFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-----RGGRIVNISSVAGLPGWP----  151 (249)
T ss_pred             HcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEECccccCCCCC----
Confidence            888999999999975442  245678899999999999999999999998764     367999999988876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH--HHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG--LLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~  260 (319)
                                 ++..|+.+|++++.+++.++.++...|  ++++.++||.+.|++............  ..+.....+++
T Consensus       152 -----------~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (249)
T PRK12825        152 -----------GRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPE  218 (249)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHH
Confidence                       367899999999999999999998888  999999999999998765421111111  23344467899


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccCC
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+++.+.+++ +......+|+++.-+
T Consensus       219 dva~~~~~~~-~~~~~~~~g~~~~i~  243 (249)
T PRK12825        219 DIARAVAFLC-SDASDYITGQVIEVT  243 (249)
T ss_pred             HHHHHHHHHh-CccccCcCCCEEEeC
Confidence            9999999999 456678899988843

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=222.94  Aligned_cols=208  Identities=23%  Similarity=0.259  Sum_probs=176.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+++||||++|||++++++|+++|++|++++|+++..+...+.+... ++.++.++++|++++++++++++++.+   ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999998887777666543 356899999999999999999998754   46


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |++|||+|....  ..+.+.+++.+.+++|+.+++.+++.+.|.|.+.     +.+++|++||..+..+.|         
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---------  143 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-----GSGTIVGISSVAGDRGRA---------  143 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecccccCCCC---------
Confidence            999999997544  2345667788999999999999999999999764     368999999988776544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            ....|+++|+++++++++++.++.+.|  |++++|+||+++|++.....        .+.....+|+++++.++
T Consensus       144 ------~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~a~~i~  207 (243)
T PRK07102        144 ------SNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGLK--------LPGPLTAQPEEVAKDIF  207 (243)
T ss_pred             ------CCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhccC--------CCccccCCHHHHHHHHH
Confidence                  356899999999999999999999999  99999999999999765432        12234578999999999


Q ss_pred             HHhc
Q 020927          268 YVAL  271 (319)
Q Consensus       268 ~l~~  271 (319)
                      .++.
T Consensus       208 ~~~~  211 (243)
T PRK07102        208 RAIE  211 (243)
T ss_pred             HHHh
Confidence            9985

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=224.24  Aligned_cols=237  Identities=27%  Similarity=0.320  Sum_probs=189.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+++|++|||||+++||+.++++|+++|++|++++|+.+..+...+...    +.++.++.+|+++++++.++++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999876665544332    23678899999999999999999998


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|+||||+|....   ....+.+.+.+++++|+.+++.+++.+++.+....    ..++|+++||..+..+.|   
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~~vv~~ss~~~~~~~~---  155 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG----HGGVIIALSSVAGRLGYP---  155 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCeEEEEecccccccCCC---
Confidence            88999999999998633   23456788999999999999999999999887531    126799999887766433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLV  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~  248 (319)
                                  ++..|+.+|++++.+++.++.++...+  ++++++.||++.|++.....             ......
T Consensus       156 ------------~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T PRK12829        156 ------------GRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYL  221 (264)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHH
Confidence                        367899999999999999999998888  99999999999998754321             011111


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ...+...+.+++++|+++++++ ++....++|+++. ++|
T Consensus       222 ~~~~~~~~~~~~d~a~~~~~l~-~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        222 EKISLGRMVEPEDIAATALFLA-SPAARYITGQAISVDGN  260 (264)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHc-CccccCccCcEEEeCCC
Confidence            2223334679999999999998 4556678999877 444

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.1e-29  Score=220.33  Aligned_cols=234  Identities=18%  Similarity=0.159  Sum_probs=187.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|+++||||+++||.++++.|+++|++|++++|+++..+...+.+..   ..+++++.+|++++++++++++++..
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998877765555533   23688999999999999999999988


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .++++|.+|+|+|........+.+.++..+++|+.+++.+++.++|.+.+       .+++|++||..+...        
T Consensus        78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~--------  142 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYK--------  142 (238)
T ss_pred             HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhccc--------
Confidence            88899999999997543222334788999999999999999999999854       579999999876431        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~  264 (319)
                            +...+..|+.+|++++.+++.++.++...|  |++++|+||++.|++.....+ .. .... .....+++++++
T Consensus       143 ------~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~~~~~~-~~-~~~~-~~~~~~~~~va~  211 (238)
T PRK05786        143 ------ASPDQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFEPERNW-KK-LRKL-GDDMAPPEDFAK  211 (238)
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCCchhhh-hh-hccc-cCCCCCHHHHHH
Confidence                  122357899999999999999999999888  999999999999987432211 10 0011 122468999999


Q ss_pred             HHHHHhcCCCccCCCcccccCCcc
Q 020927          265 TTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       265 ~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+++++ ++....++|+++..+|.
T Consensus       212 ~~~~~~-~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        212 VIIWLL-TDEADWVDGVVIPVDGG  234 (238)
T ss_pred             HHHHHh-cccccCccCCEEEECCc
Confidence            999999 56667789987774444

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=8.8e-30  Score=222.03  Aligned_cols=190  Identities=26%  Similarity=0.336  Sum_probs=169.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .....+|.|+|||+-+|+|+.+|++|.++|++|++.+.+++..+....+..    ..+...+..|++++++|+++.+.++
T Consensus        24 ~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   24 LDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             ccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999988877776665543    4578899999999999999999998


Q ss_pred             hcC--CCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          104 SSG--LPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       104 ~~~--~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +..  .++-.||||||+...   .+..+.+++.+.+++|++|++.+++.++|.++++      .||||++||..+..+.|
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~~~p  173 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRVALP  173 (322)
T ss_pred             HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCccCc
Confidence            853  369999999997644   3456789999999999999999999999999985      89999999999998766


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                      .               ...|++||+|++.|+..|++|+.+.|  |.|..|.||+.+|++...
T Consensus       174 ~---------------~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~~  218 (322)
T KOG1610|consen  174 A---------------LGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLANP  218 (322)
T ss_pred             c---------------cccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCCh
Confidence            5               68999999999999999999999999  999999999999999863

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=225.03  Aligned_cols=218  Identities=26%  Similarity=0.277  Sum_probs=181.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ++++|||||++|||+++++.|+++|++|++++|++...+...+.+...  +.++.++.+|+++++++.++++++.+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988877777666554  557889999999999999999999988999


Q ss_pred             ccEEEEccccCCCC--ccc-CcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          109 LNILINNAGIMATP--FML-SKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       109 id~lv~nag~~~~~--~~~-~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      +|++|||+|.....  .+. +.+.+.+.+++|+.+++.+++.++++|.+.      .+++|++||..+..+.+       
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~~iv~~sS~~~~~~~~-------  145 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS------RGQIVVVSSLAGLTGVP-------  145 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCEEEEEecccccCCCC-------
Confidence            99999999975442  234 667889999999999999999999998753      57999999988876543       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-hHHHHHH--HHhhhhcCCHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVG--LLGKYVIKNVEQG  262 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~--~~~~~~~~~~~~v  262 (319)
                              ++..|+.+|++++.+++.++.++.+.+  ++++++.||.+.|++..... .......  ......+.+|+|+
T Consensus       146 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  215 (263)
T PRK06181        146 --------TRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEEC  215 (263)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchhhccccccccccccccccCCCCHHHH
Confidence                    367899999999999999999999988  99999999999999765321 0000000  1111246799999


Q ss_pred             HHHHHHHhc
Q 020927          263 AATTCYVAL  271 (319)
Q Consensus       263 a~~i~~l~~  271 (319)
                      |+.+++++.
T Consensus       216 a~~i~~~~~  224 (263)
T PRK06181        216 AEAILPAIA  224 (263)
T ss_pred             HHHHHHHhh
Confidence            999999994

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.6e-29  Score=222.86  Aligned_cols=233  Identities=33%  Similarity=0.378  Sum_probs=185.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhhCCC-CceEEEEcCCCC-HHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA--CREVKKAIVKEIPN-AKVQAMELDLSS-LASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~-~~v~~~~~Dl~~-~~~v~~~~~  100 (319)
                      +.+++|++|||||++|||+++|+.|+++|++|+++.|+.+.  .+...+...  ..+ ..+.+..+|+++ .++++.+++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHH
Confidence            35789999999999999999999999999998888877553  333333333  112 368888999998 999999999


Q ss_pred             HHHhcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          101 EFKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      .+.+.+|++|++|||||+..   +..+.+.++|++.+++|+.+.+.+.+.+.|.+++       . +||++||..+. +.
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-------~-~Iv~isS~~~~-~~  149 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-------Q-RIVNISSVAGL-GG  149 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-------C-eEEEECCchhc-CC
Confidence            99999999999999999875   3456777999999999999999999988888873       2 99999999988 64


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH-----HHHHHHh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS-----GLVGLLG  252 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~  252 (319)
                      +.              .+..|++||+|+.+|++.++.++.+.|  |++++|+||+++|++........     ......+
T Consensus       150 ~~--------------~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T COG1028         150 PP--------------GQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALESAELEALKRLAARIP  213 (251)
T ss_pred             CC--------------CcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCC
Confidence            43              148999999999999999999999999  99999999999999887543221     1111112


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ..+...|++++..+.++.......+++|..+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  245 (251)
T COG1028         214 LGRLGTPEEVAAAVAFLASDEAASYITGQTLP  245 (251)
T ss_pred             CCCCcCHHHHHHHHHHHcCcchhccccCCEEE
Confidence            22566788999999988743234556666544

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.2e-31  Score=211.76  Aligned_cols=242  Identities=26%  Similarity=0.263  Sum_probs=203.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -+.+|-++|||||.+|+|++.+++|+.+|+.|++++--.++.++..+++     +.++.|...|+++++++...+...+.
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~   79 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKA   79 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999998878778888877     88999999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC--------cccCcccccchhhhhhhHHHHHHHHHHHHHhccc-ccCCCCCeEEEeCCccccc
Q 020927          105 SGLPLNILINNAGIMATP--------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTA-RESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~--------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~~~~~ii~isS~~~~~  175 (319)
                      +||++|.+|||||+....        ...+.|++.+.+++|+.|+|++++...-.|.++- .+.++.|.||+..|.+++-
T Consensus        80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            999999999999986431        1346689999999999999999999999887653 2345778899999998886


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH-HH-HHHHh-
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS-GL-VGLLG-  252 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~-~~-~~~~~-  252 (319)
                                     |..++.+|++||.++.+|+--+++.++..|  ||+++|.||.++||+....+..- .+ .+.++ 
T Consensus       160 ---------------gq~gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllsslpekv~~fla~~ipf  222 (260)
T KOG1199|consen  160 ---------------GQTGQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPF  222 (260)
T ss_pred             ---------------CccchhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhhhHHHHHHHHHhCCC
Confidence                           455789999999999999999999999999  99999999999999988774321 22 22222 


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCccccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQA  291 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~  291 (319)
                      ..++..|.|.+..+-..+.   -.++||+.|.-+|...+
T Consensus       223 psrlg~p~eyahlvqaiie---np~lngevir~dgalrm  258 (260)
T KOG1199|consen  223 PSRLGHPHEYAHLVQAIIE---NPYLNGEVIRFDGALRM  258 (260)
T ss_pred             chhcCChHHHHHHHHHHHh---CcccCCeEEEecceecC
Confidence            2345789999988777773   56889999986665443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-29  Score=223.58  Aligned_cols=216  Identities=27%  Similarity=0.306  Sum_probs=176.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .|++|||||+||||++++++|+++|++|++++|+++..+...+..     +.++.++++|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999987666544332     346889999999999999999999888889


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||....  ..+.+.+.+++.+++|+.+++.+++.++|+|++.     ..++||++||..+..+.|        
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~--------  143 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-----GGGRIVQVSSEGGQIAYP--------  143 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcCcccccCCC--------
Confidence            9999999998654  2345667899999999999999999999999764     367999999988765443        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----------HHHHHHHHhh--
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----------FSGLVGLLGK--  253 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----------~~~~~~~~~~--  253 (319)
                             +...|++||++++.+++.++.++.+.|  |+++.++||.+.|++......           ...+.+.+..  
T Consensus       144 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (276)
T PRK06482        144 -------GFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS  214 (276)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc
Confidence                   367899999999999999999999888  999999999999987543210           0111111111  


Q ss_pred             -hhcCCHHHHHHHHHHHhc
Q 020927          254 -YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       254 -~~~~~~~~va~~i~~l~~  271 (319)
                       ....+|++++++++..+.
T Consensus       215 ~~~~~d~~~~~~a~~~~~~  233 (276)
T PRK06482        215 FAIPGDPQKMVQAMIASAD  233 (276)
T ss_pred             CCCCCCHHHHHHHHHHHHc
Confidence             112589999999999984

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=3.3e-29  Score=221.15  Aligned_cols=235  Identities=27%  Similarity=0.270  Sum_probs=189.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.+...  +.++.++.+|+++.+++..+++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999999999988777776666543  457899999999999999999999988889


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++|||+|....  ..+.+.+++++++++|+.+++.+++.+++.|.+.     ..+++|++||..+..+.|        
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~~v~~ss~~~~~~~~--------  145 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-----GWGRIINIASAHGLVASP--------  145 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCeEEEEEcchhhcCCCC--------
Confidence            9999999997644  2245667889999999999999999999998764     356999999987776433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----------hHHH----HHHHHh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----------FFSG----LVGLLG  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----------~~~~----~~~~~~  252 (319)
                             .+..|+.+|++++.+++.++.++...+  |+++.++||.+.|++.....          ....    +....+
T Consensus       146 -------~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T TIGR01963       146 -------FKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQP  216 (255)
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCc
Confidence                   367899999999999999999998888  99999999999998643210          0000    001112


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+.+++|+|+++++++. +.....+|+++. ++|.
T Consensus       217 ~~~~~~~~d~a~~~~~~~~-~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       217 TKRFVTVDEVAETALFLAS-DAAAGITGQAIVLDGGW  252 (255)
T ss_pred             cccCcCHHHHHHHHHHHcC-ccccCccceEEEEcCcc
Confidence            2335789999999999994 445567888766 4443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-29  Score=252.54  Aligned_cols=216  Identities=29%  Similarity=0.275  Sum_probs=184.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||++++++|+++|++|++++|+++.+++..+.+...  +.++.++.+|+++.++++++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998888887777554  55799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC--ccc--CcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGLPLNILINNAGIMATP--FML--SKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~--~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++|++|||||+....  ...  +.++++.++++|+.+++.+++.++|.|++.     ..++||++||.++..+.|  
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  517 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-----RFGHVVNVSSIGVQTNAP--  517 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEECChhhcCCCC--
Confidence            999999999999975331  111  236789999999999999999999999864     367999999998887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   .+..|++||+++++|+++++.++++.|  |+||+|+||+++|++.......       ......+|+
T Consensus       518 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~~~~~-------~~~~~~~~~  575 (657)
T PRK07201        518 -------------RFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAPTKRY-------NNVPTISPE  575 (657)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCccccc-------cCCCCCCHH
Confidence                         367899999999999999999999988  9999999999999987643111       122346899


Q ss_pred             HHHHHHHHHhc
Q 020927          261 QGAATTCYVAL  271 (319)
Q Consensus       261 ~va~~i~~l~~  271 (319)
                      ++|+.++..+.
T Consensus       576 ~~a~~i~~~~~  586 (657)
T PRK07201        576 EAADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHHH
Confidence            99999999874

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=9.2e-29  Score=217.40  Aligned_cols=234  Identities=21%  Similarity=0.221  Sum_probs=182.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++++|||||+++||++++++|+++|++|++++|+ .+..+...+.+.... +..+.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999985 444555444443332 34688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||||....  ..+.+.++++.++++|+.+++.+++++.|.+.+.      .+.+++++|..+..+      
T Consensus        82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~------  149 (249)
T PRK09135         82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAERP------  149 (249)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcCC------
Confidence            99999999999997544  2234567889999999999999999999998653      578888887665543      


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-h-HHHHHHHHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-F-FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-~-~~~~~~~~~~~~~~~~  259 (319)
                               ..+...|+.||++++.+++.++.++.+ +  ++++++.||++.|++.... . . ........+.....++
T Consensus       150 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (249)
T PRK09135        150 ---------LKGYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTP  217 (249)
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCH
Confidence                     234678999999999999999999865 5  9999999999999975432 1 1 1111122222334689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      +|+++++.+++. + ....+|+.+..+
T Consensus       218 ~d~a~~~~~~~~-~-~~~~~g~~~~i~  242 (249)
T PRK09135        218 EDIAEAVRFLLA-D-ASFITGQILAVD  242 (249)
T ss_pred             HHHHHHHHHHcC-c-cccccCcEEEEC
Confidence            999999998884 3 445689877633

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1.7e-29  Score=220.16  Aligned_cols=213  Identities=27%  Similarity=0.320  Sum_probs=180.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+-.|++++|||||.|||++.|++||++|++|++++|++++++.+.+++.+.+. ..++++.+|+++.+.+-+-+.+...
T Consensus        45 ~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~  123 (312)
T KOG1014|consen   45 KEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLA  123 (312)
T ss_pred             HHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhc
Confidence            334569999999999999999999999999999999999999999999999885 8899999999999873333322222


Q ss_pred             cCCCccEEEEccccCCCC----cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGLPLNILINNAGIMATP----FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      . ..+-+||||+|.....    .+.+.+.++..+.+|..+...+++.++|.|.+.     ++|-||++||.++..+.|. 
T Consensus       124 ~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-----~~G~IvnigS~ag~~p~p~-  196 (312)
T KOG1014|consen  124 G-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-----KKGIIVNIGSFAGLIPTPL-  196 (312)
T ss_pred             C-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-----CCceEEEeccccccccChh-
Confidence            1 2688899999987642    134445789999999999999999999999874     6899999999999998775 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                    ++.|+++|+.++.|+++|+.|+..+|  |.|-++.|++|.|+|.....         +..+..+|+
T Consensus       197 --------------~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~~---------~sl~~ps~~  251 (312)
T KOG1014|consen  197 --------------LSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYRK---------PSLFVPSPE  251 (312)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccCC---------CCCcCcCHH
Confidence                          89999999999999999999999999  99999999999999866441         344456888


Q ss_pred             HHHHHHHHHh
Q 020927          261 QGAATTCYVA  270 (319)
Q Consensus       261 ~va~~i~~l~  270 (319)
                      .-|...+.-+
T Consensus       252 tfaksal~ti  261 (312)
T KOG1014|consen  252 TFAKSALNTI  261 (312)
T ss_pred             HHHHHHHhhc
Confidence            8888777766

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-29  Score=219.16  Aligned_cols=217  Identities=23%  Similarity=0.262  Sum_probs=173.5

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEE
Q 020927           33 IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNIL  112 (319)
Q Consensus        33 lItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~l  112 (319)
                      |||||++|||++++++|+++|++|++++|+++..+...+.+..   +.+++++.+|+++++++.+++++    .+++|+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999998877766665542   45788999999999999998876    3689999


Q ss_pred             EEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          113 INNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       113 v~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      |||+|....  ..+.+.+++++++++|+.+++.+++  .+.+.       +.++||++||..+..+.|            
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~-------~~g~iv~~ss~~~~~~~~------------  132 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA-------PGGSLTFVSGFAAVRPSA------------  132 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc-------CCeEEEEECchhhcCCCC------------
Confidence            999998544  2345678899999999999999999  44443       267999999999887544            


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch------hHHHHHHHHhhhhcCCHHHHHH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS------FFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~va~  264 (319)
                         +...|+++|++++++++.++.++..    |++++++||+++|++.....      .........+..+...|+|+|+
T Consensus       133 ---~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  205 (230)
T PRK07041        133 ---SGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVAN  205 (230)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               3678999999999999999999874    99999999999998865321      1111222233445568999999


Q ss_pred             HHHHHhcCCCccCCCccccc-CCc
Q 020927          265 TTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       265 ~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+++++. .  .+++|+.+. ++|
T Consensus       206 ~~~~l~~-~--~~~~G~~~~v~gg  226 (230)
T PRK07041        206 AILFLAA-N--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHHhc-C--CCcCCcEEEeCCC
Confidence            9999994 2  468898766 444

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.4e-30  Score=212.42  Aligned_cols=183  Identities=26%  Similarity=0.314  Sum_probs=162.0

Q ss_pred             CCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-c
Q 020927           28 SGLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-S  105 (319)
Q Consensus        28 ~~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-~  105 (319)
                      ..|.|||||++ ||||.+++++|+++|+.|+.+.|+.+....+..       ..++..+++|++++++|.++..+++. .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~-------~~gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI-------QFGLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH-------hhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence            45789999888 899999999999999999999998776554432       23588999999999999999999988 7


Q ss_pred             CCCccEEEEccccC--CCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+|+||||..  .+..+.+.+..++.|.+|++|++++++++...+.+.      +|.||+++|..++.+.|.    
T Consensus        79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika------KGtIVnvgSl~~~vpfpf----  148 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA------KGTIVNVGSLAGVVPFPF----  148 (289)
T ss_pred             CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc------cceEEEecceeEEeccch----
Confidence            89999999999975  334467788999999999999999999999777663      899999999999998764    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                                 .+.|++||+|++.+++.|+.|+++.|  |+|..+.||-|.|++...
T Consensus       149 -----------~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  149 -----------GSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             -----------hhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence                       57899999999999999999999999  999999999999998665

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=5.1e-29  Score=248.53  Aligned_cols=237  Identities=26%  Similarity=0.298  Sum_probs=196.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+.||++|||||+||||++++++|+++|++|++++|+.+.++...+.+...   .++.++.+|+++++++.++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998887776665432   47889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|++|||||+...  ..+.+.+.|+..+++|+.+++.+++.+++.|+++.    ..++||++||..+..+.|     
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~----~~g~iV~vsS~~~~~~~~-----  566 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG----LGGSIVFIASKNAVNPGP-----  566 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCcEEEEECCccccCCCC-----
Confidence            9999999999998654  33567789999999999999999999999998641    247999999998877544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc--cCCcccCchh----------HH----HH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI--TTNLFRNISF----------FS----GL  247 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v--~t~~~~~~~~----------~~----~~  247 (319)
                                ++..|+++|++++.+++.++.++++.|  |+||.|+||.+  .|++......          ..    .+
T Consensus       567 ----------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~  634 (681)
T PRK08324        567 ----------NFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFY  634 (681)
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHH
Confidence                      367899999999999999999999999  99999999999  8876543200          00    11


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ....+......++|+|+++++++ ++.....+|+.+. ++|
T Consensus       635 ~~~~~l~~~v~~~DvA~a~~~l~-s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        635 RARNLLKREVTPEDVAEAVVFLA-SGLLSKTTGAIITVDGG  674 (681)
T ss_pred             HhcCCcCCccCHHHHHHHHHHHh-CccccCCcCCEEEECCC
Confidence            11223334578999999999998 4667788999877 444

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=215.11  Aligned_cols=195  Identities=18%  Similarity=0.183  Sum_probs=161.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +++|||||++|||++++++|+++ ++|++++|+..                   .+++|+++++++++++++    .+++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            37999999999999999999999 99999999742                   367999999999998875    4689


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||||....  ..+.+.++|.+.+++|+.+++++++.++|+|.+       .++|+++||..+..+.|         
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~~~~---------  120 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDEPIP---------  120 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCCCCC---------
Confidence            999999997543  234677889999999999999999999999964       57999999988876544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            ++..|+++|+++++|++.++.|+ ++|  |+||+|+||+++|++....       ...+.....+|+++|+.++
T Consensus       121 ------~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~a~~~~  184 (199)
T PRK07578        121 ------GGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEKYG-------PFFPGFEPVPAARVALAYV  184 (199)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhhhh-------hcCCCCCCCCHHHHHHHHH
Confidence                  36789999999999999999999 888  9999999999999864211       1122233568999999999


Q ss_pred             HHhcCCCccCCCccccc
Q 020927          268 YVALHPHVKGLTGSYFA  284 (319)
Q Consensus       268 ~l~~s~~~~~~~G~~~~  284 (319)
                      .++.    ...+|+.|.
T Consensus       185 ~~~~----~~~~g~~~~  197 (199)
T PRK07578        185 RSVE----GAQTGEVYK  197 (199)
T ss_pred             HHhc----cceeeEEec
Confidence            9983    246787654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-28  Score=214.77  Aligned_cols=223  Identities=22%  Similarity=0.251  Sum_probs=184.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.+.+++++||||+|+||++++++|+++|++|++++|+++..++..+.+...   .+++++.+|+++++++.++++++.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998887777766432   5688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|++|||+|....  ..+.+.+.+++.+++|+.+++.+++++++.+.+      ..++||++||..+..+.     
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~iv~~ss~~~~~~~-----  147 (237)
T PRK07326         79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR------GGGYIINISSLAGTNFF-----  147 (237)
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH------CCeEEEEECChhhccCC-----
Confidence            88999999999997543  234667889999999999999999999999843      25799999998876532     


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                .+...|+.+|++++.+++.++.++...|  +++++|+||.+.|++........       .....+++++
T Consensus       148 ----------~~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~-------~~~~~~~~d~  208 (237)
T PRK07326        148 ----------AGGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGHTPSEK-------DAWKIQPEDI  208 (237)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCcccccccchh-------hhccCCHHHH
Confidence                      2367899999999999999999999888  99999999999998765432110       1113589999


Q ss_pred             HHHHHHHhcCCCccCCCcc
Q 020927          263 AATTCYVALHPHVKGLTGS  281 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~  281 (319)
                      ++.+++++. .....+.++
T Consensus       209 a~~~~~~l~-~~~~~~~~~  226 (237)
T PRK07326        209 AQLVLDLLK-MPPRTLPSK  226 (237)
T ss_pred             HHHHHHHHh-CCccccccc
Confidence            999999995 444444444

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-29  Score=218.92  Aligned_cols=201  Identities=25%  Similarity=0.282  Sum_probs=167.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++++||||++|||++++++|+++|++|++++|+++.+++..+.      ..++.++.+|++++++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            7899999999999999999999999999999998766554332      34688899999999999999887642   57


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |++|||||....  ....+.++|++++++|+.+++.+++.++|+|.+       .++||++||..+..+.|         
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~~---------  136 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASELALP---------  136 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhccCCC---------
Confidence            999999996432  223567889999999999999999999999854       46899999988877544         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            ++..|+++|++++++++.++.++.+.|  |++++|+||++.|++.....+.        .....+|+++|+.++
T Consensus       137 ------~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~~~~--------~~~~~~~~~~a~~i~  200 (240)
T PRK06101        137 ------RAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKNTFA--------MPMIITVEQASQEIR  200 (240)
T ss_pred             ------CCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCCCCC--------CCcccCHHHHHHHHH
Confidence                  367899999999999999999999999  9999999999999986543211        112358999999999


Q ss_pred             HHhc
Q 020927          268 YVAL  271 (319)
Q Consensus       268 ~l~~  271 (319)
                      ..+.
T Consensus       201 ~~i~  204 (240)
T PRK06101        201 AQLA  204 (240)
T ss_pred             HHHh
Confidence            9885

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=1.2e-28  Score=215.30  Aligned_cols=229  Identities=29%  Similarity=0.366  Sum_probs=186.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|+++++++++++.++.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999998875 4444444555433  45688999999999999999999998889999


Q ss_pred             EEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          111 ILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       111 ~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      ++|||+|....  ..+.+.+.+++.+++|+.+.+.+++.+.+.+.+.     ..+++|++||.++..+.|          
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~g~~----------  143 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-----RSGRIINISSVVGLMGNA----------  143 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCeEEEEECCccccCCCC----------
Confidence            99999998643  2345668899999999999999999999998653     367999999988776533          


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCHHHHHHHH
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                           ++..|+.+|++++.+++.++.++...|  ++++.++||++.|++......  ...+....+..+..+++++++.+
T Consensus       144 -----~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  216 (239)
T TIGR01830       144 -----GQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAV  216 (239)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence                 367899999999999999999998888  999999999999987554321  11222233444567999999999


Q ss_pred             HHHhcCCCccCCCcccccC
Q 020927          267 CYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~  285 (319)
                      ++++ ++...+.+|+++..
T Consensus       217 ~~~~-~~~~~~~~g~~~~~  234 (239)
T TIGR01830       217 AFLA-SDEASYITGQVIHV  234 (239)
T ss_pred             HHHh-CcccCCcCCCEEEe
Confidence            9998 46666789987763

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.7e-29  Score=217.69  Aligned_cols=217  Identities=24%  Similarity=0.291  Sum_probs=170.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH-HHhcC--
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE-FKSSG--  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~-i~~~~--  106 (319)
                      +++|||||++|||++++++|+++|++|++++|+.+..  .   . . ..+.++.++++|+++.+++++++.+ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---A-A-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---h-h-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3799999999999999999999999999999986531  1   1 1 1255789999999999999998776 54433  


Q ss_pred             -CCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          107 -LPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       107 -~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                       +++|++|||+|....   ..+.+.+++++.+++|+.+++.+++.+++.|.+.     ..++||++||..+..+.+    
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~----  145 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-----AERRILHISSGAARNAYA----  145 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-----CCCEEEEEeChhhcCCCC----
Confidence             479999999997543   2345678899999999999999999999999763     367999999988876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (319)
                                 ++..|+++|++++++++.++.+ ...|  |++++|+||+++|++....        .....+....+..
T Consensus       146 -----------~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (243)
T PRK07023        146 -----------GWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASG  211 (243)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcC
Confidence                       4788999999999999999999 7777  9999999999999875422        1111223334455


Q ss_pred             hcCCHHHHHHHHHHHhcCCCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVK  276 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~  276 (319)
                      +..+|+++|+.++.++.++...
T Consensus       212 ~~~~~~~va~~~~~~l~~~~~~  233 (243)
T PRK07023        212 ALSTPEDAARRLIAYLLSDDFG  233 (243)
T ss_pred             CCCCHHHHHHHHHHHHhccccC
Confidence            6779999999766655455543

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.9e-28  Score=210.84  Aligned_cols=199  Identities=25%  Similarity=0.284  Sum_probs=163.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+++||||++|||++++++|+++|++|++++|+++..+...+       ..++.++.+|++++++++++++++.+  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            789999999999999999999999999999998766543311       22577888999999999999998854  479


Q ss_pred             cEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          110 NILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       110 d~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      |++|||||+...    ..+.+.+++...+++|+.+++.+++.+++.+...      .+++++++|..+..+.+.      
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~iv~~ss~~g~~~~~~------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG------QGVLAFMSSQLGSVELPD------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc------CCEEEEEccCccccccCC------
Confidence            999999998633    2345678899999999999999999999998652      578999999776543221      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                            ...+..|+++|++++.|++.++.++.+.+  |+||+|+||+++|++.....             -.++++.++.
T Consensus       141 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~~~-------------~~~~~~~~~~  199 (225)
T PRK08177        141 ------GGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGDNA-------------PLDVETSVKG  199 (225)
T ss_pred             ------CCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCCCC-------------CCCHHHHHHH
Confidence                  22467899999999999999999999988  99999999999999865431             1367788888


Q ss_pred             HHHHh
Q 020927          266 TCYVA  270 (319)
Q Consensus       266 i~~l~  270 (319)
                      ++..+
T Consensus       200 ~~~~~  204 (225)
T PRK08177        200 LVEQI  204 (225)
T ss_pred             HHHHH
Confidence            88887

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=4e-28  Score=200.77  Aligned_cols=161  Identities=40%  Similarity=0.497  Sum_probs=144.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC--HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRN--MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~--~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..++..+.+...  +.++.++++|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7899999999999999999999976 78999999  77777887777755  6889999999999999999999999889


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|++|||+|+...  ..+.+.+.|+++|++|+.+++.+.+.++|   +      ..++||++||..+..+.|.     
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~------~~g~iv~~sS~~~~~~~~~-----  144 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q------GGGKIVNISSIAGVRGSPG-----  144 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H------TTEEEEEEEEGGGTSSSTT-----
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee---c------cccceEEecchhhccCCCC-----
Confidence            999999999998764  23456789999999999999999999999   2      3789999999999987664     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHh
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRL  216 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~  216 (319)
                                +..|+++|+|+.+|+++|+.|+
T Consensus       145 ----------~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  145 ----------MSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHhc
Confidence                      7899999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.96  E-value=1.2e-27  Score=201.25  Aligned_cols=274  Identities=26%  Similarity=0.320  Sum_probs=211.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-----EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-----HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-----~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..|++||||++||||.+|+++|++...     +|++++|+.++++++.+.+...+|  ..++.++.+|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            468999999999999999999998753     588889999999999999999988  4578899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCCCc-----------------------------ccCcccccchhhhhhhHHHHHHHHHHHH
Q 020927          101 EFKSSGLPLNILINNAGIMATPF-----------------------------MLSKDNIELQFATNHIGHFLLTNLLLET  151 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~-----------------------------~~~~~~~~~~~~vn~~~~~~l~~~~~~~  151 (319)
                      +++++|.++|.+..|||++..+.                             ..+.|++...|+.|++|++.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            99999999999999999764210                             1466889999999999999999999999


Q ss_pred             HhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 020927          152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG  231 (319)
Q Consensus       152 l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG  231 (319)
                      +...     +++.+|++||..+..   .+++++|++..+|.   ..|+.||.+.+.+.-++-+.+.+.|  +..++++||
T Consensus       162 l~~~-----~~~~lvwtSS~~a~k---k~lsleD~q~~kg~---~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~pg  228 (341)
T KOG1478|consen  162 LCHS-----DNPQLVWTSSRMARK---KNLSLEDFQHSKGK---EPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQPG  228 (341)
T ss_pred             hhcC-----CCCeEEEEeeccccc---ccCCHHHHhhhcCC---CCcchhHHHHHHHHHHHhccccccc--hhhhcccCc
Confidence            8764     466999999977664   78889999988866   5689999999999999999999999  999999999


Q ss_pred             cccCCcccCc-hhHHH---HHH-----HHhhhh-cCCHHHHHHHHHHHhcCCCccCC-----CcccccCCcccccChhcc
Q 020927          232 AITTNLFRNI-SFFSG---LVG-----LLGKYV-IKNVEQGAATTCYVALHPHVKGL-----TGSYFADSNVAQASSQAV  296 (319)
Q Consensus       232 ~v~t~~~~~~-~~~~~---~~~-----~~~~~~-~~~~~~va~~i~~l~~s~~~~~~-----~G~~~~~~g~~~~~~~~~  296 (319)
                      ...|.+.... +++.-   ...     .+.... .-+|-..|++.+|+.. ....+.     -|+-....|..-.-....
T Consensus       229 ~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l-~~p~~~~q~iKygsAttrfG~~yi~tq~i  307 (341)
T KOG1478|consen  229 IFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL-ANPNFEKQDIKYGSATTRFGMPYIKTQEI  307 (341)
T ss_pred             eeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh-cCcccccccchhhhccccCCchhhccccC
Confidence            9999987654 11111   111     111111 1367789999999863 333332     344333333322223334


Q ss_pred             CHHHHHHHHHHHHHHHHHh
Q 020927          297 NTELAQKLWDFSSDLIYRC  315 (319)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~  315 (319)
                      |+..++...+|.++.--+|
T Consensus       308 dpt~~~~~~~y~~k~k~ew  326 (341)
T KOG1478|consen  308 DPTGMSDVFAYIQKKKLEW  326 (341)
T ss_pred             CchHHHHHHHHHHHHHHHH
Confidence            4566666777766665555

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.2e-27  Score=207.52  Aligned_cols=215  Identities=23%  Similarity=0.247  Sum_probs=169.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+.+..++..+.....  +.++.++.+|+++++++.+++.      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            689999999999999999999999999999999987776665555443  4468899999999998877653      38


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||+...  ..+.+.+.++..+++|+.+++.+.+.+++.+.+.     ..++||++||..+..+.|        
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~SS~~~~~~~~--------  140 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-----GKGKVVFTSSMAGLITGP--------  140 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEcChhhccCCC--------
Confidence            9999999997643  3356678899999999999999999999998764     357999999988776433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-H-------HHHHHH---Hhhhh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-F-------SGLVGL---LGKYV  255 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-~-------~~~~~~---~~~~~  255 (319)
                             +...|++||++++.+++.++.++.+.|  |++++|+||++.|++...... .       ......   .....
T Consensus       141 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (257)
T PRK09291        141 -------FTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLE  211 (257)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcccc
Confidence                   357899999999999999999999889  999999999999987543210 0       000100   00111


Q ss_pred             cCCHHHHHHHHHHHhcCC
Q 020927          256 IKNVEQGAATTCYVALHP  273 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~  273 (319)
                      ..+++++++.++.++.++
T Consensus       212 ~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        212 QFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             CCCHHHHHHHHHHHhcCC
Confidence            257899999999888533

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=9.4e-27  Score=203.64  Aligned_cols=201  Identities=28%  Similarity=0.362  Sum_probs=170.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |++.++++|||||+|+||++++++|+++|+ +|++++|+.++.++         .+.++.++.+|+++.+++.++++.  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh--
Confidence            678899999999999999999999999999 99999999866543         155789999999999999888775  


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                        ++++|++|||+|....   ..+.+.+.+.+.+++|+.+++.+++.++|.+.+.     ..+++|++||..+..+.+  
T Consensus        71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~~v~~sS~~~~~~~~--  141 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-----GGGAIVNVLSVLSWVNFP--  141 (238)
T ss_pred             --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcChhhccCCC--
Confidence              3579999999998332   3356778899999999999999999999998764     367999999988876433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   ++..|+.+|++++.+++.++.++.+.|  ++++++.||.++|++.....           ....+++
T Consensus       142 -------------~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~~~-----------~~~~~~~  195 (238)
T PRK08264        142 -------------NLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAGLD-----------APKASPA  195 (238)
T ss_pred             -------------CchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCcccccccccCC-----------cCCCCHH
Confidence                         367899999999999999999999888  99999999999999855431           1136789


Q ss_pred             HHHHHHHHHhc
Q 020927          261 QGAATTCYVAL  271 (319)
Q Consensus       261 ~va~~i~~l~~  271 (319)
                      ++++.++..+.
T Consensus       196 ~~a~~~~~~~~  206 (238)
T PRK08264        196 DVARQILDALE  206 (238)
T ss_pred             HHHHHHHHHHh
Confidence            99999998884

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=2.2e-28  Score=203.21  Aligned_cols=232  Identities=17%  Similarity=0.133  Sum_probs=184.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+|++|+||++.|||..+++.+.+++......++++...+  .+.+...++ ........|++...-..++++..+.+++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            5788999999999999999999988866555544443333  222222332 4566677888888888899999999999


Q ss_pred             CccEEEEccccCCCC---c--ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          108 PLNILINNAGIMATP---F--MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       108 ~id~lv~nag~~~~~---~--~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +.|++|||||...+.   .  .-+.+.|.+.|++|+++.+.+.+.++|.+++..    -.+.+|++||.++..+++    
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p----~~~~vVnvSS~aav~p~~----  153 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP----VNGNVVNVSSLAAVRPFS----  153 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC----ccCeEEEecchhhhcccc----
Confidence            999999999987762   2  356688999999999999999999999998742    268999999999998754    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (319)
                                 .|..||++|+|+++|.+.||.|-- ++  |++.++.||.++|+|...+        .....+.+.....
T Consensus       154 -----------~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~  219 (253)
T KOG1204|consen  154 -----------SWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESG  219 (253)
T ss_pred             -----------HHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcC
Confidence                       599999999999999999998854 66  9999999999999997654        1222344445667


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+.+|...|+.+..|+..  ..+++|++++..
T Consensus       220 ~ll~~~~~a~~l~~L~e~--~~f~sG~~vdy~  249 (253)
T KOG1204|consen  220 QLLDPQVTAKVLAKLLEK--GDFVSGQHVDYY  249 (253)
T ss_pred             CcCChhhHHHHHHHHHHh--cCcccccccccc
Confidence            788999999999999852  229999998743

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=204.26  Aligned_cols=198  Identities=17%  Similarity=0.115  Sum_probs=147.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|+++||||++|||++++++|+++|++|++++|+.....+   .. ..  . ...++.+|+++.+++.+       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHHHHHH-------
Confidence            45789999999999999999999999999999999998632111   11 11  1 23678899999987764       


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .++++|+||||||+... .+.+.++|++.+++|+.+++.+++.++|.|.++..  ...+.+++.+|.++..+ +      
T Consensus        76 ~~~~iDilVnnAG~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~g~~iiv~ss~a~~~~-~------  145 (245)
T PRK12367         76 QLASLDVLILNHGINPG-GRQDPENINKALEINALSSWRLLELFEDIALNNNS--QIPKEIWVNTSEAEIQP-A------  145 (245)
T ss_pred             hcCCCCEEEECCccCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--CCCeEEEEEecccccCC-C------
Confidence            34689999999997432 34567899999999999999999999999975310  11234555555554432 1      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHH---HHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHT---SELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~---~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (319)
                               ....|++||+|+..+.   +.++.++.+.+  ++|+.++||+++|++...              ...+|++
T Consensus       146 ---------~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~~~--------------~~~~~~~  200 (245)
T PRK12367        146 ---------LSPSYEISKRLIGQLVSLKKNLLDKNERKK--LIIRKLILGPFRSELNPI--------------GIMSADF  200 (245)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHHhhcccc--cEEEEecCCCcccccCcc--------------CCCCHHH
Confidence                     2467999999986543   44444556677  999999999999986321              1368999


Q ss_pred             HHHHHHHHhc
Q 020927          262 GAATTCYVAL  271 (319)
Q Consensus       262 va~~i~~l~~  271 (319)
                      +|+.+++.+.
T Consensus       201 vA~~i~~~~~  210 (245)
T PRK12367        201 VAKQILDQAN  210 (245)
T ss_pred             HHHHHHHHHh
Confidence            9999999995

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=9.6e-27  Score=202.59  Aligned_cols=221  Identities=23%  Similarity=0.202  Sum_probs=188.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +.++|||+++|||+++|+.+..+|++|.++.|+.++++++.+.+........+.+..+|+.+.+++..++++++..++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999998776544458899999999999999999999999999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |.+|||||...+  +.+.+.+.++..+++|+.++++.+++.++.|++..    ..|+|++++|.++..+..         
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~----~~g~I~~vsS~~a~~~i~---------  180 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE----HLGRIILVSSQLAMLGIY---------  180 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc----cCcEEEEehhhhhhcCcc---------
Confidence            999999998766  45778899999999999999999999999998741    245999999999998644         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH-HHH-hhhhcCCHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV-GLL-GKYVIKNVEQGAAT  265 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~-~~~~~~~~~~va~~  265 (319)
                            +++.|+++|+|+.+++..++.|+.+.|  |.|....|+.+.||.+..-+...... ..+ ......++|++|.+
T Consensus       181 ------GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~  252 (331)
T KOG1210|consen  181 ------GYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKA  252 (331)
T ss_pred             ------cccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHH
Confidence                  589999999999999999999999999  99999999999999776542111111 111 11223689999999


Q ss_pred             HHHHhc
Q 020927          266 TCYVAL  271 (319)
Q Consensus       266 i~~l~~  271 (319)
                      ++.-+.
T Consensus       253 ~~~~~~  258 (331)
T KOG1210|consen  253 IVKGMK  258 (331)
T ss_pred             HHhHHh
Confidence            988774

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=3.3e-26  Score=202.24  Aligned_cols=214  Identities=30%  Similarity=0.312  Sum_probs=172.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc-CC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS-GL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~-~~  107 (319)
                      .|+++||||+|+||+++++.|+++|++|++++|+.+..+...    .    ..+.++.+|+++.+++..+++.+... .+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999999987665432    1    24778899999999999999988764 46


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|++|||+|....  ..+.+.+.+++.+++|+.|++.+.+.+++.+.+.     ..++||++||..+..+.+       
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~~~~~~~~-------  141 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSVMGLISTP-------  141 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCcccccCCC-------
Confidence            89999999997543  3345778899999999999999999999999764     357999999988776433       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH---HH-HHHHhhhhcCCHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS---GL-VGLLGKYVIKNVEQ  261 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~~~~~~  261 (319)
                              +...|+++|++++.+++.++.++...+  +++++|+||.+.|++........   .. ........+.+|+|
T Consensus       142 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  211 (256)
T PRK08017        142 --------GRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEA  211 (256)
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHH
Confidence                    367899999999999999999999888  99999999999998765431111   00 01112233578999


Q ss_pred             HHHHHHHHhcC
Q 020927          262 GAATTCYVALH  272 (319)
Q Consensus       262 va~~i~~l~~s  272 (319)
                      +++.++.++..
T Consensus       212 ~a~~~~~~~~~  222 (256)
T PRK08017        212 VVPKLRHALES  222 (256)
T ss_pred             HHHHHHHHHhC
Confidence            99999999953

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.9e-26  Score=197.27  Aligned_cols=209  Identities=23%  Similarity=0.264  Sum_probs=167.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||+++||++++++|+++|++|++++|+.+..++...        ..+.++.+|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA--------LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh--------ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            689999999999999999999999999999999876554321        1356889999999999998877642  479


Q ss_pred             cEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          110 NILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       110 d~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      |++|||+|....    ..+.+.++++..+++|+.+++.+++.++|+|.+.      .+++|+++|..+..+.+.      
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA------GGVLAVLSSRMGSIGDAT------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc------CCeEEEEcCccccccccc------
Confidence            999999998632    2245778999999999999999999999998652      578999999877653211      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                            ......|+++|++++.+++.++.++.  +  +++|+|+||+++|++.....             ..++++.++.
T Consensus       140 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~~~-------------~~~~~~~~~~  196 (222)
T PRK06953        140 ------GTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGAQA-------------ALDPAQSVAG  196 (222)
T ss_pred             ------CCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCCCC-------------CCCHHHHHHH
Confidence                  11123699999999999999998863  5  99999999999999865321             2378999999


Q ss_pred             HHHHhcCCCccCCCccccc
Q 020927          266 TCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       266 i~~l~~s~~~~~~~G~~~~  284 (319)
                      +..++. ......+|.++.
T Consensus       197 ~~~~~~-~~~~~~~~~~~~  214 (222)
T PRK06953        197 MRRVIA-QATRRDNGRFFQ  214 (222)
T ss_pred             HHHHHH-hcCcccCceEEe
Confidence            999885 445677888886

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=5.5e-27  Score=205.89  Aligned_cols=211  Identities=24%  Similarity=0.223  Sum_probs=160.5

Q ss_pred             HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCcc
Q 020927           45 TARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM  124 (319)
Q Consensus        45 ia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~  124 (319)
                      +|++|+++|++|++++|+.+..+             ...++++|+++.++++++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            57899999999999999876532             12367899999999999998874   58999999999742    


Q ss_pred             cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC---------cCcC---CCCCCCC
Q 020927          125 LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI---------RFDR---INDQSGY  192 (319)
Q Consensus       125 ~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~---------~~~~---~~~~~~~  192 (319)
                        .+.++..+++|+.+++.+++.++|+|.+       .|+||++||.+++...+...         ++++   .....+.
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV  131 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence              2468899999999999999999999853       47999999998874211000         0000   0001234


Q ss_pred             CccccchhhHHHHHHHHHHHH-HHhccCCCcEEEEEeeCCcccCCcccCchhH--HHHH--HHHhhhhcCCHHHHHHHHH
Q 020927          193 NRFSAYGQSKLANVLHTSELA-RRLKEDGVDITANSVHPGAITTNLFRNISFF--SGLV--GLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       193 ~~~~~Y~~sK~a~~~~~~~la-~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~--~~~~--~~~~~~~~~~~~~va~~i~  267 (319)
                      .++..|++||++++++++.++ .+++++|  |+||+|+||.+.|+|.......  ....  ...+..++.+|+++|+.++
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~  209 (241)
T PRK12428        132 ALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLV  209 (241)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHH
Confidence            456789999999999999999 9999989  9999999999999987643110  1111  1123445679999999999


Q ss_pred             HHhcCCCccCCCcccccCCc
Q 020927          268 YVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       268 ~l~~s~~~~~~~G~~~~~~g  287 (319)
                      |++ ++...+++|+.+..+|
T Consensus       210 ~l~-s~~~~~~~G~~i~vdg  228 (241)
T PRK12428        210 FLC-SDAARWINGVNLPVDG  228 (241)
T ss_pred             HHc-ChhhcCccCcEEEecC
Confidence            998 6888899999877443

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.5e-25  Score=189.95  Aligned_cols=207  Identities=23%  Similarity=0.276  Sum_probs=165.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .|++|||||+++||++++++|+++ ++|++++|+.+..++..+.      ...+.++.+|+++++++.++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE------LPGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH------hccceEEecCCCCHHHHHHHHHhc----CC
Confidence            579999999999999999999999 9999999998765544322      124788999999999998887754    47


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|++||++|....  ..+.+.+++.+.+++|+.+.+.+.+.+++.+.+.      .+++|++||..+..+.+        
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~~~~--------  137 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLRANP--------  137 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcCcCC--------
Confidence            9999999998543  2345668899999999999999999999998763      57999999988876433        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                             +...|+.+|++++.+++.++.++...   +++++|+||.+.|++........  ....+...+.+++|+|+.+
T Consensus       138 -------~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~  205 (227)
T PRK08219        138 -------GWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQRGLVAQE--GGEYDPERYLRPETVAKAV  205 (227)
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhhhhhhhh--ccccCCCCCCCHHHHHHHH
Confidence                   36789999999999999998887643   99999999999987644321110  1112233457899999999


Q ss_pred             HHHhcC
Q 020927          267 CYVALH  272 (319)
Q Consensus       267 ~~l~~s  272 (319)
                      ++++..
T Consensus       206 ~~~l~~  211 (227)
T PRK08219        206 RFAVDA  211 (227)
T ss_pred             HHHHcC
Confidence            999953

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.93  E-value=1.4e-24  Score=202.22  Aligned_cols=199  Identities=21%  Similarity=0.166  Sum_probs=149.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||+++||||+||||++++++|+++|++|++++|+.+.+++..   ...  ...+..+.+|+++++++.+.+   
T Consensus       172 ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~l---  243 (406)
T PRK07424        172 TALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAELL---  243 (406)
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHHh---
Confidence            346788999999999999999999999999999999999876554322   111  234678899999998876543   


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                          +++|++|||||+... .+.+.+++++++++|+.|++.+++.++|.|+++.. ...++.+|++|+ ++..+ +    
T Consensus       244 ----~~IDiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~-~~~~~iiVn~Ss-a~~~~-~----  311 (406)
T PRK07424        244 ----EKVDILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRD-KATKEVWVNTSE-AEVNP-A----  311 (406)
T ss_pred             ----CCCCEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCeEEEEEcc-ccccC-C----
Confidence                479999999997543 34667889999999999999999999999976421 011234566654 33221 1    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 ..+.|++||+|+..++. +.++.  .+  +.+..+.||+++|++...              ...+||++
T Consensus       312 -----------~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~~~--------------~~~spe~v  361 (406)
T PRK07424        312 -----------FSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLNPI--------------GVMSADWV  361 (406)
T ss_pred             -----------CchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCCcC--------------CCCCHHHH
Confidence                       24679999999999974 44443  34  556678899999986421              13589999


Q ss_pred             HHHHHHHhc
Q 020927          263 AATTCYVAL  271 (319)
Q Consensus       263 a~~i~~l~~  271 (319)
                      |+.+++++.
T Consensus       362 A~~il~~i~  370 (406)
T PRK07424        362 AKQILKLAK  370 (406)
T ss_pred             HHHHHHHHH
Confidence            999999995

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.90  E-value=1.8e-21  Score=177.19  Aligned_cols=255  Identities=13%  Similarity=0.069  Sum_probs=177.3

Q ss_pred             CCCCEEEEeCCCCchhHH--HHHHHHHCCCEEEEEeCCHHHHH------------HHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           27 GSGLTAIVTGASSGIGTE--TARVLALRGVHVVMAVRNMAACR------------EVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        27 l~~k~vlItGas~gIG~a--ia~~La~~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      -.||++|||||++|||++  +|+.| +.|++|+++++..+..+            .+.+.+...  +..+..+.+|++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence            457999999999999999  89999 99999888885332211            223333322  45678899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCc-----------------------ccCcc-------------cccchhhh
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMATPF-----------------------MLSKD-------------NIELQFAT  136 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~~~-----------------------~~~~~-------------~~~~~~~v  136 (319)
                      ++++++++++.+.+|++|+||||+|......                       +.+.+             ++..  .+
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~--Tv  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD--TV  193 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH--HH
Confidence            9999999999999999999999999752211                       00001             1111  11


Q ss_pred             hhhHH-----HHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHH
Q 020927          137 NHIGH-----FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSE  211 (319)
Q Consensus       137 n~~~~-----~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  211 (319)
                      .+.|.     |.=.+...+.|.       ..+++|..|..++....|.            |+ ....+.+|++++.-++.
T Consensus       194 ~vMggedw~~Wi~al~~a~lla-------~g~~~va~TY~G~~~t~p~------------Y~-~g~mG~AKa~LE~~~r~  253 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLA-------EGAKTVAYSYIGPELTHPI------------YW-DGTIGKAKKDLDRTALA  253 (398)
T ss_pred             HhhccchHHHHHHHHHhccccc-------CCcEEEEEecCCcceeecc------------cC-CchHHHHHHHHHHHHHH
Confidence            22222     222344444453       3689999999998887654            11 13568999999999999


Q ss_pred             HHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH---HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcc--cccCC
Q 020927          212 LARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG---LLGKYVIKNVEQGAATTCYVALHPHVKGLTGS--YFADS  286 (319)
Q Consensus       212 la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~--~~~~~  286 (319)
                      |+.++++.|  +|+|++.+|.+.|.....++.+.-+..   .+++.. ..-|.+.+.+.-|.. ..-.. .|.  .+++.
T Consensus       254 La~~L~~~g--iran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~~-g~he~~ieq~~rl~~-~~ly~-~~~~~~~d~~  328 (398)
T PRK13656        254 LNEKLAAKG--GDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKEK-GTHEGCIEQIYRLFS-ERLYR-DGAIPEVDEE  328 (398)
T ss_pred             HHHHhhhcC--CEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHhc-CCCCChHHHHHHHHH-Hhccc-CCCCCCcCCc
Confidence            999999999  999999999999998777754443332   223322 245667777777763 22221 232  26788


Q ss_pred             cccccChhccCHHHHHHHHHHHHHH
Q 020927          287 NVAQASSQAVNTELAQKLWDFSSDL  311 (319)
Q Consensus       287 g~~~~~~~~~~~~~~~~~~~~~~~~  311 (319)
                      |...+++|+.++++|+++-+.-+++
T Consensus       329 ~r~r~d~~el~~~vq~~v~~~~~~~  353 (398)
T PRK13656        329 GRLRLDDWELRPDVQAAVRELWPQV  353 (398)
T ss_pred             CCcccchhhcCHHHHHHHHHHHHHh
Confidence            9999999999999888665544443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.89  E-value=1.7e-22  Score=220.21  Aligned_cols=181  Identities=19%  Similarity=0.140  Sum_probs=151.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCH-------------------------------------------
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNM-------------------------------------------   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~-------------------------------------------   63 (319)
                      +|+++|||||++|||.++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 58999999982                                           


Q ss_pred             ----HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhh
Q 020927           64 ----AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATN  137 (319)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn  137 (319)
                          .....+.+.+...  +.++.++.+|++|.+++.++++++.+. +++|+||||||+...  ..+.+.++|++.|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                1111222233222  567899999999999999999999876 589999999998654  3467889999999999


Q ss_pred             hhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc
Q 020927          138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       138 ~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                      +.|.+++++++.+.+         .++||++||.++..+.+               ++..|+++|++++.+++.++.++.
T Consensus      2153 v~G~~~Ll~al~~~~---------~~~IV~~SSvag~~G~~---------------gqs~YaaAkaaL~~la~~la~~~~ 2208 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN---------IKLLALFSSAAGFYGNT---------------GQSDYAMSNDILNKAALQLKALNP 2208 (2582)
T ss_pred             HHHHHHHHHHHHHhC---------CCeEEEEechhhcCCCC---------------CcHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999987754         34899999999988544               478999999999999999998864


Q ss_pred             cCCCcEEEEEeeCCcccCCccc
Q 020927          218 EDGVDITANSVHPGAITTNLFR  239 (319)
Q Consensus       218 ~~g~~i~v~~v~PG~v~t~~~~  239 (319)
                        +  ++|++|+||+++|+|..
T Consensus      2209 --~--irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2209 --S--AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             --C--cEEEEEECCeecCCccc
Confidence              3  89999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=5e-21  Score=175.29  Aligned_cols=203  Identities=16%  Similarity=0.147  Sum_probs=151.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++||++|||||+|+||++++++|+++|  .+|++++|+........+.+    +..++.++.+|+++.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            468999999999999999999999987  68999998865543322222    23468899999999999888765    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|++||+||......  ......+.+++|+.+++++++++.+.         ..++||++||.....         
T Consensus        74 ---~iD~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~aa~~~---------~~~~iV~~SS~~~~~---------  130 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVPA--AEYNPFECIRTNINGAQNVIDAAIDN---------GVKRVVALSTDKAAN---------  130 (324)
T ss_pred             ---cCCEEEECcccCCCch--hhcCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeCCCCCC---------
Confidence               5899999999753221  12233578999999999999998763         145999999965432         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----Hh------hh
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----LG------KY  254 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~------~~  254 (319)
                               +...|++||++.+.+++.++.+++..|  ++++++.||.+.++...-++.+......    ++      ..
T Consensus       131 ---------p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r  199 (324)
T TIGR03589       131 ---------PINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTR  199 (324)
T ss_pred             ---------CCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceE
Confidence                     246799999999999999988888888  9999999999988642212222222111    11      11


Q ss_pred             hcCCHHHHHHHHHHHhc
Q 020927          255 VIKNVEQGAATTCYVAL  271 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~  271 (319)
                      .+..++|++++++.++.
T Consensus       200 ~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       200 FWITLEQGVNFVLKSLE  216 (324)
T ss_pred             eeEEHHHHHHHHHHHHh
Confidence            24689999999999984

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=4e-21  Score=183.48  Aligned_cols=212  Identities=15%  Similarity=0.082  Sum_probs=155.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----C--CCCceEEEEcCCCCHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-----I--PNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~--~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .+||++|||||+|+||++++++|+++|++|++++|+.+.++.+.+.+...     .  ...++.++.+|+++.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            47899999999999999999999999999999999998887766655331     0  1235889999999998876543


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-CCC
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-SYP  178 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~~p  178 (319)
                             +++|+||||+|....    ...++...+++|+.+..++++++.+.         ..++||++||.++.. ..+
T Consensus       158 -------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a---------gVgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        158 -------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA---------KVNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             -------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh---------CCCEEEEEccchhcccCcc
Confidence                   479999999996432    11246778899999999999888653         246999999987642 111


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhc
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVI  256 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (319)
                                      ...|. +|.++..+.+.+..++...|  |+++.|+||++.|++....  .............+.
T Consensus       218 ----------------~~~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~  278 (576)
T PLN03209        218 ----------------AAILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQ  278 (576)
T ss_pred             ----------------ccchh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccccccccceeeccccccCCCc
Confidence                            11233 77777778888888888888  9999999999988754311  000000111223445


Q ss_pred             CCHHHHHHHHHHHhcCCCccC
Q 020927          257 KNVEQGAATTCYVALHPHVKG  277 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~  277 (319)
                      .+.+|||+.+++++.++...+
T Consensus       279 isreDVA~vVvfLasd~~as~  299 (576)
T PLN03209        279 VSNLQVAELMACMAKNRRLSY  299 (576)
T ss_pred             cCHHHHHHHHHHHHcCchhcc
Confidence            689999999999995454443

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=1.8e-21  Score=161.35  Aligned_cols=173  Identities=23%  Similarity=0.234  Sum_probs=139.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHH---HHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREV---KKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~---~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |+++||||++|||++++++|+++|. .|++++|+.+..+..   .+.+...  +.++.++.+|++++++++++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876543322   2333332  567889999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|++|||+|+...  ....+.++++..+++|+.+++.+.+.+.+.         ..+++|++||..+..+.+     
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~ii~~ss~~~~~~~~-----  144 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL---------PLDFFVLFSSVAGVLGNP-----  144 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC---------CcceEEEEccHHHhcCCC-----
Confidence            8999999999997643  235667889999999999999999988331         257999999988876533     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT  234 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~  234 (319)
                                .+..|+++|+++..+++.++    ..+  +++..+.||+++
T Consensus       145 ----------~~~~y~~sk~~~~~~~~~~~----~~~--~~~~~~~~g~~~  179 (180)
T smart00822      145 ----------GQANYAAANAFLDALAAHRR----ARG--LPATSINWGAWA  179 (180)
T ss_pred             ----------CchhhHHHHHHHHHHHHHHH----hcC--CceEEEeecccc
Confidence                      36789999999999886654    456  778899999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=8.7e-20  Score=167.08  Aligned_cols=224  Identities=17%  Similarity=0.130  Sum_probs=155.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .||++|||||+|+||++++++|+++|++|++++|+....+.............++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999988876544432222111112468899999999999888775       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC-cCcCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI-RFDRI  186 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~-~~~~~  186 (319)
                      ++|++|||||....  ..+.+.+.+.+++|+.+++++++++.+.+.        .++||++||.+++...+... ....+
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS--------VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecchhheecCCccCCCCCcc
Confidence            58999999996432  233456788999999999999999987531        45999999987765321100 00012


Q ss_pred             CCCCCCCc------cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHhh------
Q 020927          187 NDQSGYNR------FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLGK------  253 (319)
Q Consensus       187 ~~~~~~~~------~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~------  253 (319)
                      ++.....+      ...|+.||.+.+.+++.+++++   |  +.++.+.|+.+-++..... .+...+...+..      
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~  221 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFN  221 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCC
Confidence            22222211      2569999999999988876654   5  8888899999988764321 111111111110      


Q ss_pred             ---hhcCCHHHHHHHHHHHhcCC
Q 020927          254 ---YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 ---~~~~~~~~va~~i~~l~~s~  273 (319)
                         ..+..++|+|++++.++..+
T Consensus       222 ~~~r~~i~v~Dva~a~~~~l~~~  244 (325)
T PLN02989        222 TTHHRFVDVRDVALAHVKALETP  244 (325)
T ss_pred             CcCcCeeEHHHHHHHHHHHhcCc
Confidence               12345899999999998543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.85  E-value=8.4e-20  Score=162.45  Aligned_cols=235  Identities=19%  Similarity=0.158  Sum_probs=167.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+++|+||||+|.||..|+++|+++|+.|+.+.|+++..+.+.....-+....+...+..|+.++++++.+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            7899999999999999999999999999999999998754432222223335679999999999999999988       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-CCCC-----
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-PEGI-----  181 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-p~~~-----  181 (319)
                      ++|+|+|.|..+....   .+.-.+.++.++.|+.++++++...-        .=.|||++||.++.... +...     
T Consensus        78 gcdgVfH~Asp~~~~~---~~~e~~li~pav~Gt~nVL~ac~~~~--------sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDL---EDPEKELIDPAVKGTKNVLEACKKTK--------SVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             CCCEEEEeCccCCCCC---CCcHHhhhhHHHHHHHHHHHHHhccC--------CcceEEEeccHHHhccCCcCCCCCccc
Confidence            7999999999654321   11233788999999999999997642        13499999999988754 2111     


Q ss_pred             ---cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hh-HHHHHHHHh----
Q 020927          182 ---RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SF-FSGLVGLLG----  252 (319)
Q Consensus       182 ---~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~----  252 (319)
                         +|+|.+.+....  ..|+.||...+..+..++.+-   |  +...+|+||.|-.|..... +. .....+.+.    
T Consensus       147 dE~~wsd~~~~~~~~--~~Y~~sK~lAEkaAw~fa~e~---~--~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~  219 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKK--LWYALSKTLAEKAAWEFAKEN---G--LDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAE  219 (327)
T ss_pred             ccccCCcHHHHHhhH--HHHHHHHHHHHHHHHHHHHhC---C--ccEEEecCCceECCCcccccchhHHHHHHHHhcccc
Confidence               244443332222  468889988776665555543   4  8888899999999877652 11 111111111    


Q ss_pred             -----hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccc
Q 020927          253 -----KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       253 -----~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~  290 (319)
                           ...++...|+|.+.+.++..+.+.   |+|++......
T Consensus       220 ~~~n~~~~~VdVrDVA~AHv~a~E~~~a~---GRyic~~~~~~  259 (327)
T KOG1502|consen  220 TYPNFWLAFVDVRDVALAHVLALEKPSAK---GRYICVGEVVS  259 (327)
T ss_pred             cCCCCceeeEeHHHHHHHHHHHHcCcccC---ceEEEecCccc
Confidence                 122478999999999999655544   89998665543

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=1.1e-19  Score=168.00  Aligned_cols=222  Identities=17%  Similarity=0.097  Sum_probs=157.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++||++|||||+|+||.++++.|+++|++|++++|+..........+..   ..++.++.+|+++.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            4689999999999999999999999999999999977644333332221   336778999999999999988864    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+|||+|+....  ..+.+++...+++|+.+++.+++++... .       ..+++|++||...+......   ..+
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~-------~~~~iv~~SS~~vyg~~~~~---~~~  140 (349)
T TIGR02622        75 -KPEIVFHLAAQPLV--RKSYADPLETFETNVMGTVNLLEAIRAI-G-------SVKAVVNVTSDKCYRNDEWV---WGY  140 (349)
T ss_pred             -CCCEEEECCccccc--ccchhCHHHHHHHhHHHHHHHHHHHHhc-C-------CCCEEEEEechhhhCCCCCC---CCC
Confidence             68999999995322  2344567789999999999999987431 1       14599999997765421100   012


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHh---------
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKE----DGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLG---------  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------  252 (319)
                      .+.....+...|+.||.+.+.+++.++.++..    .+  ++++++.|+.+-++..... .+...+.....         
T Consensus       141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~--i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~  218 (349)
T TIGR02622       141 RETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG--IKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRN  218 (349)
T ss_pred             ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCC--CcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECC
Confidence            22333445678999999999999999888755    36  9999999999987642111 11122222111         


Q ss_pred             ---hhhcCCHHHHHHHHHHHhc
Q 020927          253 ---KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ---~~~~~~~~~va~~i~~l~~  271 (319)
                         ..-+...+|++++++.++.
T Consensus       219 g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       219 PDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             CCcccceeeHHHHHHHHHHHHH
Confidence               1123467899999887763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=2.4e-19  Score=167.93  Aligned_cols=222  Identities=16%  Similarity=0.165  Sum_probs=186.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++||++|||||+|.||.++++++++.+. ++++++|++.+......+++..+|..++.++-+|+.|.+.+..++++.   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            6999999999999999999999999986 799999999999999999999888889999999999999999998865   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        ++|+++|.|+.-+.+.  -.....+.+.+|++|+.++++++...-.+         ++|.+|+..+..|         
T Consensus       325 --kvd~VfHAAA~KHVPl--~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV~P---------  382 (588)
T COG1086         325 --KVDIVFHAAALKHVPL--VEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAVNP---------  382 (588)
T ss_pred             --CCceEEEhhhhccCcc--hhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCcccCC---------
Confidence              7999999999865542  23566788999999999999999887543         9999999888864         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH---------Hhhhhc
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL---------LGKYVI  256 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~  256 (319)
                               ...||+||...+.++++++......+  -++.+|.-|.|-..-..-++.|.+.++.         -..+++
T Consensus       383 ---------tNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyf  451 (588)
T COG1086         383 ---------TNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFF  451 (588)
T ss_pred             ---------chHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEE
Confidence                     67899999999999999988777655  8899999999988766666766665543         123556


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|.++.+++...    ...+|+.+. +.|+
T Consensus       452 MTI~EAv~LVlqA~a----~~~gGeifvldMGe  480 (588)
T COG1086         452 MTIPEAVQLVLQAGA----IAKGGEIFVLDMGE  480 (588)
T ss_pred             EEHHHHHHHHHHHHh----hcCCCcEEEEcCCC
Confidence            789999999999874    345677666 6654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=6.1e-19  Score=161.31  Aligned_cols=225  Identities=21%  Similarity=0.206  Sum_probs=151.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ...||+||||||+|+||.+++++|+++|++|+++.|+....+.............++.++.+|+++++++.++++     
T Consensus         2 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          2 NGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----
Confidence            356899999999999999999999999999999998876544332222111113468899999999998888776     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-CCCCCCcCc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-SYPEGIRFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~~p~~~~~~  184 (319)
                        .+|++||+|+.....   ..+...+.+++|+.++.++++++....        .-++||++||.+++. ..+....-.
T Consensus        77 --~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 --GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP--------SVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             --CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC--------CccEEEEecchhheecCCccCCCCC
Confidence              589999999964221   123345678999999999998875421        135999999987642 111100000


Q ss_pred             CCCCCCCC------CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHH-HHh----
Q 020927          185 RINDQSGY------NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVG-LLG----  252 (319)
Q Consensus       185 ~~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~-~~~----  252 (319)
                      .++++...      .+...|+.||.+.+.+++.+.+++   |  +.++++.|+.+-++..... .+...... ...    
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~  218 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL  218 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC
Confidence            01111100      123569999999998888776654   5  8899999999998864321 11111111 111    


Q ss_pred             ----hhhcCCHHHHHHHHHHHhcCC
Q 020927          253 ----KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       253 ----~~~~~~~~~va~~i~~l~~s~  273 (319)
                          ...+..++|+|++++.++..+
T Consensus       219 ~~~~~~~~v~v~Dva~a~~~al~~~  243 (322)
T PLN02986        219 FNNRFYRFVDVRDVALAHIKALETP  243 (322)
T ss_pred             CCCcCcceeEHHHHHHHHHHHhcCc
Confidence                113568999999999998644

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.82  E-value=4.9e-19  Score=163.16  Aligned_cols=232  Identities=16%  Similarity=0.082  Sum_probs=153.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHh--hCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVK--EIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+..  ...+.++.++.+|+++.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999998654211 11111111  01134688999999999999998886


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +     .+|+|||+|+.....  ...+.....+++|+.++.++++++.+.+.+.    ++..++|++||...+...+.  
T Consensus        82 ~-----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~----~~~~~~v~~Ss~~vyg~~~~--  148 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQET----GRQIKYYQAGSSEMYGSTPP--  148 (340)
T ss_pred             c-----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcccc----ccceeEEEeccHHHhCCCCC--
Confidence            5     689999999975432  2224456778999999999999998876431    01237888988765543221  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCC-CcEEEEEeeCCcccCCcccCchh-HHHHHHH----H--h-
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDG-VDITANSVHPGAITTNLFRNISF-FSGLVGL----L--G-  252 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g-~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~----~--~-  252 (319)
                         .+.+.....+...|+.||.+.+.+++.++.+++-.- ..+.+|.+.||...+.+...+.. ...+...    +  . 
T Consensus       149 ---~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  225 (340)
T PLN02653        149 ---PQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGN  225 (340)
T ss_pred             ---CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCC
Confidence               223334455677899999999999999988765311 01445555676433211111100 1111110    0  0 


Q ss_pred             ---hhhcCCHHHHHHHHHHHhcC
Q 020927          253 ---KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 ---~~~~~~~~~va~~i~~l~~s  272 (319)
                         ..-+...+|+|++++.++..
T Consensus       226 g~~~rd~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        226 LDASRDWGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             CcceecceeHHHHHHHHHHHHhc
Confidence               11235789999999998853

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.2e-18  Score=157.57  Aligned_cols=231  Identities=14%  Similarity=0.052  Sum_probs=152.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA--CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      =++|+||||||+|+||++++++|+++|++|+++.|+.+.  .......+...  +.++.++.+|+++.+++.+++.    
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc----
Confidence            357899999999999999999999999999999986432  22222222111  3468889999999988876654    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC-CCCcC
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP-EGIRF  183 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p-~~~~~  183 (319)
                         .+|.++|.++....   . ...+++.+++|+.+++++++++.+.+.        .++||++||.++....+ ...+.
T Consensus        78 ---~~d~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~~~  142 (297)
T PLN02583         78 ---GCSGLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNISTQ  142 (297)
T ss_pred             ---CCCEEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCCCC
Confidence               67889887654221   1 124678999999999999999987541        35999999988764221 10010


Q ss_pred             cCCCCCCCCC------ccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHH--hhh
Q 020927          184 DRINDQSGYN------RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLL--GKY  254 (319)
Q Consensus       184 ~~~~~~~~~~------~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~--~~~  254 (319)
                      ..+++.....      ....|+.||...+.++..+++.   .|  +.+++|+|+.+-++..... ..........  ...
T Consensus       143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~g--i~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  217 (297)
T PLN02583        143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RG--VNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVL  217 (297)
T ss_pred             CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hC--CcEEEEcCCcccCCCCCCchhhhcCCcccCcccCc
Confidence            0111111100      0126999999999988777654   36  9999999999988764321 1111100011  112


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+..++|+|++++.++..+.   ..|.|+...
T Consensus       218 ~~v~V~Dva~a~~~al~~~~---~~~r~~~~~  246 (297)
T PLN02583        218 VTVDVNFLVDAHIRAFEDVS---SYGRYLCFN  246 (297)
T ss_pred             ceEEHHHHHHHHHHHhcCcc---cCCcEEEec
Confidence            35789999999999995332   245666643

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=1e-18  Score=144.71  Aligned_cols=147  Identities=20%  Similarity=0.222  Sum_probs=118.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||+++||||++|||+++++.|+++|++|++++|+.+..+++.+++...  +.++.++.+|+++.+++.++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999988877777777643  44677889999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc--CCCCCeEEEeCCccccc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE--SSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~--~~~~~~ii~isS~~~~~  175 (319)
                      .++++|++|||||+...  ......+..+.  .+|+.+.+..++.+.+++.++.++  ....||+-.||+.+...
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQENDSN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhHhh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999999999998653  22221222233  667778899999999998766432  24688999999877554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.81  E-value=1.5e-19  Score=159.41  Aligned_cols=218  Identities=19%  Similarity=0.209  Sum_probs=155.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceE----EEEcCCCCHHHHHHHHHHHHhcC
Q 020927           32 AIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQ----AMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~----~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ||||||+|.||.+++++|++.+. +|++++|++..+-....++....++.++.    .+.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999995 79999999999999999887766554443    4588999999999988865    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+++|.|+.-+.+.  -.+...+.+++|++|+.++++++..+-         -.++|+||+.-+..|          
T Consensus        77 -~pdiVfHaAA~KhVpl--~E~~p~eav~tNv~GT~nv~~aa~~~~---------v~~~v~ISTDKAv~P----------  134 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPL--MEDNPFEAVKTNVLGTQNVAEAAIEHG---------VERFVFISTDKAVNP----------  134 (293)
T ss_dssp             -T-SEEEE------HHH--HCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGCSS-----------
T ss_pred             -CCCEEEEChhcCCCCh--HHhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEccccccCCC----------
Confidence             8999999999865532  224668889999999999999998764         349999999887763          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH---------HhhhhcC
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL---------LGKYVIK  257 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~  257 (319)
                              ...||+||...+.++.+++......+  .++.+|.-|.|-..-..-++.+...++.         -..++++
T Consensus       135 --------tnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffm  204 (293)
T PF02719_consen  135 --------TNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFM  204 (293)
T ss_dssp             ---------SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE
T ss_pred             --------CcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEe
Confidence                    57899999999999999888876666  8999999999987654545555444432         1235567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +++|.++.++..+.    ....|+.+. +.|..
T Consensus       205 ti~EAv~Lvl~a~~----~~~~geifvl~mg~~  233 (293)
T PF02719_consen  205 TIEEAVQLVLQAAA----LAKGGEIFVLDMGEP  233 (293)
T ss_dssp             -HHHHHHHHHHHHH----H--TTEEEEE---TC
T ss_pred             cHHHHHHHHHHHHh----hCCCCcEEEecCCCC
Confidence            99999999999874    233576555 55443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.81  E-value=5.7e-18  Score=156.78  Aligned_cols=223  Identities=19%  Similarity=0.077  Sum_probs=151.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      -..|+||||||+|+||.+++++|+++|++|++++|+.+................++.++.+|+++.+.+.++++      
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            35789999999999999999999999999999999876554433222111112368899999999988887765      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC---cC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI---RF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~---~~  183 (319)
                       .+|++||+|+.....   ..+.....+++|+.++.++++++.+...        .++||++||...+...+...   +.
T Consensus        77 -~~d~ViH~A~~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 -GCTGVFHVATPMDFE---SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             -CCCEEEEeCCCCCCC---CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCccCc
Confidence             589999999864211   1233457899999999999999876431        24899999986554322110   00


Q ss_pred             cC---CCCC-CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHH------
Q 020927          184 DR---INDQ-SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGL------  250 (319)
Q Consensus       184 ~~---~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~------  250 (319)
                      ++   .+.. ....+...|+.||.+.+.+++.++.++   |  ++++.+.|+.+-++.....   .+...+...      
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  219 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH  219 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc
Confidence            00   0000 001123479999999999998887653   5  8999999999988754321   111111100      


Q ss_pred             ---HhhhhcCCHHHHHHHHHHHhcC
Q 020927          251 ---LGKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       251 ---~~~~~~~~~~~va~~i~~l~~s  272 (319)
                         .....+..++|++++++.++..
T Consensus       220 ~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        220 YSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cCcCCCcceeeHHHHHHHHHHHhcC
Confidence               0113457899999999999853

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.81  E-value=2.9e-19  Score=149.98  Aligned_cols=171  Identities=22%  Similarity=0.258  Sum_probs=129.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRNM---AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...+...+.++..  +.++.++.+|+++++++.++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            799999999999999999999996 899999983   2344566677665  7799999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      ++++.+||+||....  ..+.+.+.++..+...+.+.++|.+.+.+.         ....+|+.||.++..+.|      
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~---------~l~~~i~~SSis~~~G~~------  144 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR---------PLDFFILFSSISSLLGGP------  144 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT---------TTSEEEEEEEHHHHTT-T------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC---------CCCeEEEECChhHhccCc------
Confidence            999999999998654  446788899999999999999999888652         245999999999998654      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI  233 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v  233 (319)
                               ++..|+++.+.++.|++....    .|  ..+.+|+-|..
T Consensus       145 ---------gq~~YaaAN~~lda~a~~~~~----~g--~~~~sI~wg~W  178 (181)
T PF08659_consen  145 ---------GQSAYAAANAFLDALARQRRS----RG--LPAVSINWGAW  178 (181)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHH----TT--SEEEEEEE-EB
T ss_pred             ---------chHhHHHHHHHHHHHHHHHHh----CC--CCEEEEEcccc
Confidence                     488999999999988765433    45  55666776654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02214 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.3e-17  Score=153.97  Aligned_cols=225  Identities=18%  Similarity=0.167  Sum_probs=152.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV-KKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..... ...+..  ...++.++.+|+++.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-----
Confidence            5788999999999999999999999999999999986543221 122211  12468889999999998888776     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        ++|+|||+|+..       .++..+.+++|+.++.++++++....         .++||++||..+....+....-..
T Consensus        81 --~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~~---------v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 --GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEAK---------VKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             --cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhcC---------CCEEEEeccceeeeccCCCCCCcc
Confidence              689999999953       13467889999999999999886531         349999999765543222100000


Q ss_pred             CCCCC------CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHh-----
Q 020927          186 INDQS------GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLG-----  252 (319)
Q Consensus       186 ~~~~~------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-----  252 (319)
                      ++++.      ...+...|+.||.+.+.+++.++.++   |  +.+..+.|+.+-.+.....  .....+.....     
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~  217 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT  217 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc
Confidence            11111      11234579999999999988776654   5  8888999999987753311  11111111110     


Q ss_pred             ----hhhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          253 ----KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       253 ----~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                          ..-+..++|+|++++.++..+.   ..|.|+.
T Consensus       218 ~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~  250 (342)
T PLN02214        218 YANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLL  250 (342)
T ss_pred             CCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEE
Confidence                1124579999999999985332   2355544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.79  E-value=2.1e-17  Score=153.13  Aligned_cols=222  Identities=18%  Similarity=0.145  Sum_probs=149.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..+++||||||+|+||.+++++|+++|++|++++|+.+..+.+...+..   +.++.++.+|+++.+++.++++      
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc------
Confidence            4678999999999999999999999999999999987655544333321   3568899999999998887765      


Q ss_pred             CCccEEEEccccCCCCcccCccccc-----chhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIE-----LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~-----~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                       .+|+|||+|+........+.++..     ..+++|+.+..++++++.+..        ..++||++||.+.+...+...
T Consensus        79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--------~~~~~v~~SS~~vyg~~~~~~  149 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--------TVKRVVFTSSISTLTAKDSNG  149 (353)
T ss_pred             -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--------CccEEEEEechhhccccccCC
Confidence             589999999975443211222222     345666789999998886542        135999999987765332111


Q ss_pred             cC-cCCCCC--C-------CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-ch-hHHHHHH
Q 020927          182 RF-DRINDQ--S-------GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-IS-FFSGLVG  249 (319)
Q Consensus       182 ~~-~~~~~~--~-------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~~-~~~~~~~  249 (319)
                      .+ ..+++.  .       ...+...|+.||.+.+.+++.+++++   |  +.+.++.|+.+-++.... ++ ....+..
T Consensus       150 ~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~~~~~  224 (353)
T PLN02896        150 RWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLTPSVPSSIQVLLS  224 (353)
T ss_pred             CCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcCCCCCchHHHHHH
Confidence            11 011111  0       01123479999999999988777654   5  889999998888775321 11 1111111


Q ss_pred             HH----h-------------hhhcCCHHHHHHHHHHHhc
Q 020927          250 LL----G-------------KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       250 ~~----~-------------~~~~~~~~~va~~i~~l~~  271 (319)
                      .+    .             ..-+..++|+|++++.++.
T Consensus       225 ~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        225 PITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             HhcCCccccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence            00    0             0124689999999999985

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.79  E-value=2.6e-17  Score=152.54  Aligned_cols=226  Identities=15%  Similarity=0.076  Sum_probs=148.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |+||||||+|+||+++++.|+++|+. |++++|.... ... ..+....++.++.++.+|+++.+++++++++.     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            57999999999999999999999986 4455554321 111 11111112346888999999999998888752     6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+||....  ..+.+.+...+++|+.++.++++++.+.+..-........++|++||.+.+.......  ..+.+
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~--~~~~E  150 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD--DFFTE  150 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC--CCcCC
Confidence            9999999996532  2234567889999999999999999876421100001134899999976553211100  11333


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHH--Hh-------hhh
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGL--LG-------KYV  255 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~--~~-------~~~  255 (319)
                      .....+...|+.||.+.+.+++.++++++     +.+..+.|+.+-.+......+.    ......  ++       ..-
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  225 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRD  225 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeC
Confidence            34445667899999999999999887753     5566677877766543211111    111110  11       122


Q ss_pred             cCCHHHHHHHHHHHhc
Q 020927          256 IKNVEQGAATTCYVAL  271 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~  271 (319)
                      +..++|+++++..++.
T Consensus       226 ~i~v~D~a~a~~~~~~  241 (355)
T PRK10217        226 WLYVEDHARALYCVAT  241 (355)
T ss_pred             cCcHHHHHHHHHHHHh
Confidence            4688999999998884

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=1.5e-17  Score=151.97  Aligned_cols=222  Identities=16%  Similarity=0.117  Sum_probs=147.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||+|+||+.++++|+++|++|++++|+..................++.++.+|+++++++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            5789999999999999999999999999999998765433222111111112478899999999988877765       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc--cCCCCCCcCcC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ--FSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~--~~~p~~~~~~~  185 (319)
                      ++|++||+|+.....   ..+.....+++|+.++.++++++....        ...+||++||.++.  ...+...+ ..
T Consensus        76 ~~d~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~v~~SS~~~~~y~~~~~~~~-~~  143 (322)
T PLN02662         76 GCEGVFHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVP--------SVKRVVVTSSMAAVAYNGKPLTPD-VV  143 (322)
T ss_pred             CCCEEEEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCC--------CCCEEEEccCHHHhcCCCcCCCCC-Cc
Confidence            689999999964321   112234788999999999999986532        13499999998653  21111000 01


Q ss_pred             CCCCCCCCc------cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhH-HHHHHHH------
Q 020927          186 INDQSGYNR------FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFF-SGLVGLL------  251 (319)
Q Consensus       186 ~~~~~~~~~------~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~------  251 (319)
                      ++++....+      ...|+.+|.+.+.+++.+.+++   +  +++..+.|+.+-++..... ... ..+...+      
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  218 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF  218 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC
Confidence            222211111      2469999999998887766543   5  8888999999988764321 111 1111111      


Q ss_pred             --hhhhcCCHHHHHHHHHHHhcCC
Q 020927          252 --GKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       252 --~~~~~~~~~~va~~i~~l~~s~  273 (319)
                        ....+..++|+|++++.++..+
T Consensus       219 ~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        219 PNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             CCCCcCeEEHHHHHHHHHHHhcCc
Confidence              1123568899999999998543

>PLN02240 UDP-glucose 4-epimerase

Probab=99.78  E-value=6.4e-17  Score=149.62  Aligned_cols=185  Identities=19%  Similarity=0.142  Sum_probs=130.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI--PNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      |.|++|++|||||+|+||.+++++|+++|++|++++|...........+....  ...++.++.+|+++++++.+++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            56789999999999999999999999999999999875332222112222111  1346888999999999998887753


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           .+|+|||+|+.....  .+.+.....+++|+.++.++++++...         +.+++|++||...+.. +.   
T Consensus        81 -----~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~vyg~-~~---  140 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMAKH---------GCKKLVFSSSATVYGQ-PE---  140 (352)
T ss_pred             -----CCCEEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhCC-CC---
Confidence                 799999999975321  233566788999999999998866431         1358999999754432 11   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI  233 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v  233 (319)
                      ...++++....+...|+.||.+.+.+++.++...  .+  +.+..+.|+.+
T Consensus       141 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~~~R~~~v  187 (352)
T PLN02240        141 EVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PE--WKIILLRYFNP  187 (352)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CCEEEEeecCc
Confidence            1123344455567789999999999998877542  23  55555555433

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=2.3e-17  Score=152.31  Aligned_cols=226  Identities=17%  Similarity=0.101  Sum_probs=144.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhh---CCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVKE---IPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~-~~~~~~~~~---~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |+||||||+|+||++++++|+++|++|++++|+.+... .....+...   ..+.++.++.+|+++.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            68999999999999999999999999999998753210 111111111   01246889999999999999988865   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        ++|++||+|+......  ..+.-...+++|+.++.++++++.+.-.+      +..++|++||...+.....    ..
T Consensus        78 --~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt~~ll~a~~~~~~~------~~~~~v~~SS~~vyg~~~~----~~  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGTLRLLEAVRTLGLI------KSVKFYQASTSELYGKVQE----IP  143 (343)
T ss_pred             --CCCEEEECCcccccch--hhhChHHHHHHHHHHHHHHHHHHHHhCCC------cCeeEEEeccHHhhCCCCC----CC
Confidence              6899999999754321  22233567788999999999998774211      1248999999876543211    11


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCc-EEEEEeeCCcccCCcccCch-hHHHHHHH------H----hh
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVD-ITANSVHPGAITTNLFRNIS-FFSGLVGL------L----GK  253 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~-i~v~~v~PG~v~t~~~~~~~-~~~~~~~~------~----~~  253 (319)
                      +.++....+...|+.||.+.+.+++.++.++.-.... +.+|...|+.-..-+...+. ....+...      +    ..
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  223 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAK  223 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccc
Confidence            3334455567789999999999999988876432200 23344445432111111110 11111100      0    11


Q ss_pred             hhcCCHHHHHHHHHHHhcC
Q 020927          254 YVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s  272 (319)
                      .-+..++|++++++.++..
T Consensus       224 rd~i~V~D~a~a~~~~~~~  242 (343)
T TIGR01472       224 RDWGHAKDYVEAMWLMLQQ  242 (343)
T ss_pred             cCceeHHHHHHHHHHHHhc
Confidence            2235789999999988853

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.77  E-value=2.6e-17  Score=156.58  Aligned_cols=195  Identities=15%  Similarity=0.136  Sum_probs=135.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH---H----H---------HHHHHHHHhhCCCCceEEEEc
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA---A----C---------REVKKAIVKEIPNAKVQAMEL   87 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~---~----~---------~~~~~~~~~~~~~~~v~~~~~   87 (319)
                      ..++++|+||||||+|+||++++++|+++|++|+++++...   .    .         ....+.+... .+.++.++.+
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~  120 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVG  120 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEEC
Confidence            35678999999999999999999999999999999874211   0    0         0111111111 1346889999


Q ss_pred             CCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEE
Q 020927           88 DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIV  166 (319)
Q Consensus        88 Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii  166 (319)
                      |+++.+.+.++++++     ++|+|||+|+...... ..+.+.+...+++|+.+++++++++...-        ...++|
T Consensus       121 Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--------v~~~~V  187 (442)
T PLN02572        121 DICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--------PDCHLV  187 (442)
T ss_pred             CCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--------CCccEE
Confidence            999999999988864     7999999997643322 23344566778999999999999886642        124899


Q ss_pred             EeCCcccccCCCCCCcCcCCC------CC---CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          167 NVSSRRHQFSYPEGIRFDRIN------DQ---SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       167 ~isS~~~~~~~p~~~~~~~~~------~~---~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      ++||...+...+...+.+.+.      ++   ....+...|+.||.+.+.+++.++..+   |  +.+..+.|+.+-.+.
T Consensus       188 ~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~~v~lR~~~vyGp~  262 (442)
T PLN02572        188 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVR  262 (442)
T ss_pred             EEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CCEEEEecccccCCC
Confidence            999987665321111111110      11   123445689999999998887766653   5  888889998887764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.75  E-value=9.3e-17  Score=147.89  Aligned_cols=222  Identities=15%  Similarity=0.096  Sum_probs=147.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++++++|||||+|+||+.++++|+++|++|++++|+.+....... +.......++.++.+|+++.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            458999999999999999999999999999988887543322211 1111001258899999999988887765      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC---C--C
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE---G--I  181 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~---~--~  181 (319)
                       ++|++||+|+....   ...+.+...+++|+.+..++++++....        ..++||++||.+.+...+.   .  .
T Consensus        80 -~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~--------~~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 -GCDLVFHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK--------SVKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             -cCCEEEEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeecceeeeccCCCCCCcee
Confidence             68999999995311   1123345678999999999999986632        1359999999876653210   0  0


Q ss_pred             cCc---CCC-CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-ch----hHHHHHH--H
Q 020927          182 RFD---RIN-DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-IS----FFSGLVG--L  250 (319)
Q Consensus       182 ~~~---~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~~----~~~~~~~--~  250 (319)
                      +.+   ... ......+...|+.||.+.+.+++.++.++   |  +.+..+.|+.+-++.... ..    .......  .
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNE  222 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCc
Confidence            000   000 00112345679999999999888876653   5  888889999998874221 11    0111110  0


Q ss_pred             H--------h----hhhcCCHHHHHHHHHHHhcC
Q 020927          251 L--------G----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       251 ~--------~----~~~~~~~~~va~~i~~l~~s  272 (319)
                      +        +    ..-+..++|++++++.++..
T Consensus       223 ~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        223 FLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            0        0    02357899999999999853

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.75  E-value=2.6e-16  Score=142.96  Aligned_cols=214  Identities=15%  Similarity=0.072  Sum_probs=145.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHH--HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRG--VHVVMAVRNMA--ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +||||||+|+||.+++++|+++|  .+|++++|...  ..+. .+.+.   ...++.++.+|+++++++.++++..    
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLEN-LADLE---DNPRYRFVKGDIGDRELVSRLFTEH----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhh-hhhhc---cCCCcEEEEcCCcCHHHHHHHHhhc----
Confidence            48999999999999999999987  68988876321  1111 11111   1236788999999999999888753    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+|||+|+....  ..+.+.....+++|+.++..+++.+...+.        ..++|++||...+.......   ..
T Consensus        73 -~~d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~~~~~~---~~  138 (317)
T TIGR01181        73 -QPDAVVHFAAESHV--DRSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGDLEKGD---AF  138 (317)
T ss_pred             -CCCEEEEcccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCCCCCCC---Cc
Confidence             69999999997532  223345677899999999999988766532        34899999976554321110   12


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-------------
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-------------  253 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------  253 (319)
                      .+.....+...|+.+|.+.+.+++.++.++   +  +.+..+.|+.+-.+......+...+......             
T Consensus       139 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (317)
T TIGR01181       139 TETTPLAPSSPYSASKAASDHLVRAYHRTY---G--LPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQV  213 (317)
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceE
Confidence            222233455689999999999999887764   4  7778889998876643222222222211111             


Q ss_pred             hhcCCHHHHHHHHHHHhc
Q 020927          254 YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~  271 (319)
                      ..+..++|+++++..++.
T Consensus       214 ~~~i~v~D~a~~~~~~~~  231 (317)
T TIGR01181       214 RDWLYVEDHCRAIYLVLE  231 (317)
T ss_pred             EeeEEHHHHHHHHHHHHc
Confidence            123468999999998884

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.74  E-value=6.7e-16  Score=142.92  Aligned_cols=225  Identities=13%  Similarity=0.081  Sum_probs=145.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGVH-VVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +||||||+|+||.+++++|+++|.+ |+.+++..  ...+..    ....++.++.++.+|+++.+++.+++++.     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL----ADVSDSERYVFEHADICDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH----HhcccCCceEEEEecCCCHHHHHHHHHhc-----
Confidence            6999999999999999999999975 55555532  111111    11112346788999999999999988753     


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC--CCC----
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP--EGI----  181 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p--~~~----  181 (319)
                      .+|+|||+|+.....  .+.+.....+++|+.++.++++++.++|...........++|++||...+...+  ...    
T Consensus        73 ~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         73 QPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             CCCEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            799999999964321  122345778999999999999999987642210001134899999976554211  110    


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH------Hh---
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL------LG---  252 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~------~~---  252 (319)
                      ....+.+.....+...|+.||.+.+.+++.++.++.     +.+..+.|+.+-.+......+...+...      +.   
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeC
Confidence            001123444556677899999999999999887754     4444566766655542111111111111      01   


Q ss_pred             ----hhhcCCHHHHHHHHHHHhc
Q 020927          253 ----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ----~~~~~~~~~va~~i~~l~~  271 (319)
                          ..-+..++|+++++..++.
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~  248 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVT  248 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHh
Confidence                1124578999999988874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.73  E-value=6.3e-16  Score=142.98  Aligned_cols=222  Identities=12%  Similarity=0.053  Sum_probs=149.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---CCCceEEEEcCCCCHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI---PNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      -.+-+++|+||||||+|.||..++++|+++|++|++++|................   ...++.++.+|+.+.+.+.+++
T Consensus         9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181          9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            3466788999999999999999999999999999999985432222222221110   1236889999999988877776


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +       .+|+|||.|+......  ..++....+++|+.++.++++++...         .-.++|++||...+...+.
T Consensus        89 ~-------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~---------~~~~~v~~SS~~vyg~~~~  150 (348)
T PRK15181         89 K-------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA---------HVSSFTYAASSSTYGDHPD  150 (348)
T ss_pred             h-------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeechHhhCCCCC
Confidence            5       5899999999754322  22334567999999999999887542         1348999999876643222


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHH----
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLL----  251 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~----  251 (319)
                      ..    +.++....+...|+.||.+.+.+++.++..+   +  +++..+.|+.+-.+.....    .+...+....    
T Consensus       151 ~~----~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~  221 (348)
T PRK15181        151 LP----KIEERIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDE  221 (348)
T ss_pred             CC----CCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCC
Confidence            11    1122233455689999999999887766543   5  7888899998877643211    1112221111    


Q ss_pred             -----h----hhhcCCHHHHHHHHHHHhc
Q 020927          252 -----G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 -----~----~~~~~~~~~va~~i~~l~~  271 (319)
                           .    ..-+...+|+|++++.++.
T Consensus       222 ~i~~~g~g~~~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        222 PIYINGDGSTSRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             CcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence                 0    1123568999999987763

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=1.8e-16  Score=139.96  Aligned_cols=207  Identities=16%  Similarity=0.113  Sum_probs=131.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~  105 (319)
                      ..++++|||||+|+||++++++|+++|++|+++.|+.+.......    .  +.++.++.+|+++. +++   .+.+.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~~~l---~~~~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGSDKL---VEAIG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCHHHH---HHHhh--
Confidence            456899999999999999999999999999999999876443211    1  33688999999983 333   22221  


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                       .++|++|+|+|.....      +....+++|+.+...+++++..    .     +.++||++||...+....+      
T Consensus        84 -~~~d~vi~~~g~~~~~------~~~~~~~~n~~~~~~ll~a~~~----~-----~~~~iV~iSS~~v~g~~~~------  141 (251)
T PLN00141         84 -DDSDAVICATGFRRSF------DPFAPWKVDNFGTVNLVEACRK----A-----GVTRFILVSSILVNGAAMG------  141 (251)
T ss_pred             -cCCCEEEECCCCCcCC------CCCCceeeehHHHHHHHHHHHH----c-----CCCEEEEEccccccCCCcc------
Confidence             2699999999863211      1122357888898888888742    1     2569999999875432111      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHH-HHHHHH-hccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHT-SELARR-LKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~-~~la~~-~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                            ......|...|.....+. +..+.+ +...|  ++++.|.||++.++.....-...  ..........+++++|
T Consensus       142 ------~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~~~~~~~~--~~~~~~~~~i~~~dvA  211 (251)
T PLN00141        142 ------QILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPPTGNIVME--PEDTLYEGSISRDQVA  211 (251)
T ss_pred             ------cccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCCCceEEEC--CCCccccCcccHHHHH
Confidence                  111234555554433322 222222 35567  99999999999876432110000  0000111246899999


Q ss_pred             HHHHHHhcCCCcc
Q 020927          264 ATTCYVALHPHVK  276 (319)
Q Consensus       264 ~~i~~l~~s~~~~  276 (319)
                      +.++.++.++...
T Consensus       212 ~~~~~~~~~~~~~  224 (251)
T PLN00141        212 EVAVEALLCPESS  224 (251)
T ss_pred             HHHHHHhcChhhc
Confidence            9999999655543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.73  E-value=1.7e-15  Score=141.10  Aligned_cols=228  Identities=15%  Similarity=0.084  Sum_probs=149.2

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC----CCCceEEEEcCCCCHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI----PNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~   96 (319)
                      .....+.++|+||||||+|+||.+++++|+++|++|+++.|+.+..+.+ ..+....    ....+.++.+|+++.+++.
T Consensus        45 ~~~~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         45 GDAGADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             cccccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHH
Confidence            3344567899999999999999999999999999999988887655443 2221110    0135788999999999988


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc-cc
Q 020927           97 KFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH-QF  175 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~-~~  175 (319)
                      ++++       .+|.+||.|+...+....  .......++|+.+..++++++...-        .-.++|++||..+ ..
T Consensus       124 ~~i~-------~~d~V~hlA~~~~~~~~~--~~~~~~~~~nv~gt~~llea~~~~~--------~v~r~V~~SS~~~~vy  186 (367)
T PLN02686        124 EAFD-------GCAGVFHTSAFVDPAGLS--GYTKSMAELEAKASENVIEACVRTE--------SVRKCVFTSSLLACVW  186 (367)
T ss_pred             HHHH-------hccEEEecCeeecccccc--cccchhhhhhHHHHHHHHHHHHhcC--------CccEEEEeccHHHhcc
Confidence            8876       468999999875332111  1113456788999999888875421        1348999999742 21


Q ss_pred             CC--CCC----CcCcCCC-CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHH
Q 020927          176 SY--PEG----IRFDRIN-DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSG  246 (319)
Q Consensus       176 ~~--p~~----~~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~  246 (319)
                      ..  +..    ++.+... ......+...|+.||.+.+.+++.++.+   .|  ++++++.|+.+-++.....  .....
T Consensus       187 g~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--l~~v~lRp~~vyGp~~~~~~~~~~~~  261 (367)
T PLN02686        187 RQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KG--LKLATICPALVTGPGFFRRNSTATIA  261 (367)
T ss_pred             cccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cC--ceEEEEcCCceECCCCCCCCChhHHH
Confidence            11  111    1111100 0111223457999999999999877665   46  9999999999998853211  10111


Q ss_pred             HH----HHHh--hhhcCCHHHHHHHHHHHhc
Q 020927          247 LV----GLLG--KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       247 ~~----~~~~--~~~~~~~~~va~~i~~l~~  271 (319)
                      ..    ..+.  ...+..++|++++++.++.
T Consensus       262 ~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        262 YLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            11    0111  1125689999999999884

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.72  E-value=2.7e-16  Score=140.85  Aligned_cols=225  Identities=18%  Similarity=0.144  Sum_probs=150.4

Q ss_pred             EEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           33 IVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        33 lItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      |||||+|.||..|+++|+++|  .+|.++++.+.....  ..+..   -....++.+|+++.+++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  689999887654221  11111   1223399999999999999887       789


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||.|++.....   ....+..+++|+.|+-++++++...-         -.++|++||.+.........++-..++..
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~~---------VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKAG---------VKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999754422   34567899999999999999887542         44999999999877532222222112222


Q ss_pred             CC--CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHH------Hh----hhhcC
Q 020927          191 GY--NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGL------LG----KYVIK  257 (319)
Q Consensus       191 ~~--~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~------~~----~~~~~  257 (319)
                      .+  .....|+.||+..+.++......-...|..+...+|.|..|-.+.-... +......+.      +.    ..-+.
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~v  216 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFV  216 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcE
Confidence            22  2456899999999988865443112233459999999999887754332 111111111      11    11134


Q ss_pred             CHHHHHHHHHHHhc--CCC--ccCCCcc
Q 020927          258 NVEQGAATTCYVAL--HPH--VKGLTGS  281 (319)
Q Consensus       258 ~~~~va~~i~~l~~--s~~--~~~~~G~  281 (319)
                      .++++|.+++..+.  ...  .....|+
T Consensus       217 yV~NvA~ahvlA~~~L~~~~~~~~~~G~  244 (280)
T PF01073_consen  217 YVENVAHAHVLAAQALLEPGKPERVAGQ  244 (280)
T ss_pred             eHHHHHHHHHHHHHHhccccccccCCCc
Confidence            68999999987642  112  3456787

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.70  E-value=1.2e-15  Score=139.39  Aligned_cols=206  Identities=22%  Similarity=0.190  Sum_probs=142.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++++||||+|+||..+++.|+++|++|++++|+++.....        ....+.++.+|+++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL--------EGLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc--------ccCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            4799999999999999999999999999999986543211        12358899999999998888775       68


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|+....    ..+.....+++|+.++..+++++...         ..+++|++||...+...+...   ..++.
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~---~~~e~  129 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA---------GVERVVYTSSVATLGVRGDGT---PADET  129 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEechhhcCcCCCCC---CcCcc
Confidence            999999985321    22346778999999999999887643         145999999987765322111   11222


Q ss_pred             CCCC---ccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH-HHH----h-----hhhc
Q 020927          190 SGYN---RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV-GLL----G-----KYVI  256 (319)
Q Consensus       190 ~~~~---~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~----~-----~~~~  256 (319)
                      ....   ....|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+-++..........+. ...    +     ...+
T Consensus       130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (328)
T TIGR03466       130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNL  204 (328)
T ss_pred             CCCCcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcce
Confidence            2221   13579999999999988876653   5  77888999888665422111111111 100    0     1123


Q ss_pred             CCHHHHHHHHHHHhc
Q 020927          257 KNVEQGAATTCYVAL  271 (319)
Q Consensus       257 ~~~~~va~~i~~l~~  271 (319)
                      ..++|+|++++.++.
T Consensus       205 i~v~D~a~a~~~~~~  219 (328)
T TIGR03466       205 VHVDDVAEGHLLALE  219 (328)
T ss_pred             EEHHHHHHHHHHHHh
Confidence            479999999998884

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.69  E-value=3.6e-15  Score=137.20  Aligned_cols=178  Identities=20%  Similarity=0.142  Sum_probs=121.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++|||||+|+||++++++|+++|++|++++|...........+.. .++.++.++.+|+++.+++.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH-hcCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            699999999999999999999999999987643222222222222 1234678889999999998887764     2799


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      +|||+|+......  ..+.....+++|+.++.++++++...         +.+++|++||...+...+.    ..+++..
T Consensus        76 ~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~yg~~~~----~~~~E~~  140 (338)
T PRK10675         76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNLIFSSSATVYGDQPK----IPYVESF  140 (338)
T ss_pred             EEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHhhCCCCC----Ccccccc
Confidence            9999999753221  12334567899999999988765432         2458999999765542111    1122222


Q ss_pred             CC-CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 020927          191 GY-NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI  233 (319)
Q Consensus       191 ~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v  233 (319)
                      .. .+...|+.+|.+.+.+++.++++..  +  +++..+.|+.+
T Consensus       141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~--~~~~ilR~~~v  180 (338)
T PRK10675        141 PTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNP  180 (338)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhcC--C--CcEEEEEeeee
Confidence            22 3467899999999999988876542  2  45555554433

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1e-14  Score=126.65  Aligned_cols=225  Identities=20%  Similarity=0.177  Sum_probs=159.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeC-----CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVR-----NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r-----~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +++|||||+|.||..+++.+.++..  +|+.++.     +.+.+..+..       ..++.|++.|+.|.+.+.+++++.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-------~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-------SPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-------CCCceEEeccccCHHHHHHHHHhc
Confidence            5799999999999999999999874  4777764     4433322211       458999999999999999998865


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           .+|+++|-|+=.+  .+.+.++-...+++|+.|++.|++++..+..        ..|++.||..--+...+..  
T Consensus        74 -----~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~--------~frf~HISTDEVYG~l~~~--  136 (340)
T COG1088          74 -----QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWG--------KFRFHHISTDEVYGDLGLD--  136 (340)
T ss_pred             -----CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhcc--------cceEEEeccccccccccCC--
Confidence                 7999999998543  3455677788899999999999999988753        2489999987766533221  


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHH-----hh----
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL-----GK----  253 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~-----~~----  253 (319)
                      -+.+.+.+.+.+.+.|++|||+.++|++++.+.|+     +.+....+-.--.|.    .+.+.++...     ..    
T Consensus       137 ~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYg-----lp~~ItrcSNNYGPy----qfpEKlIP~~I~nal~g~~lp  207 (340)
T COG1088         137 DDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYG-----LPATITRCSNNYGPY----QFPEKLIPLMIINALLGKPLP  207 (340)
T ss_pred             CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC-----CceEEecCCCCcCCC----cCchhhhHHHHHHHHcCCCCc
Confidence            11467888999999999999999999999999876     445445554333332    2222222111     00    


Q ss_pred             --------hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCccccc
Q 020927          254 --------YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQA  291 (319)
Q Consensus       254 --------~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~  291 (319)
                              +-+.-++|=++++-.++.    .+.-|+.+.-+|..+.
T Consensus       208 vYGdG~~iRDWl~VeDh~~ai~~Vl~----kg~~GE~YNIgg~~E~  249 (340)
T COG1088         208 VYGDGLQIRDWLYVEDHCRAIDLVLT----KGKIGETYNIGGGNER  249 (340)
T ss_pred             eecCCcceeeeEEeHhHHHHHHHHHh----cCcCCceEEeCCCccc
Confidence                    011256888888888874    2334777666555444

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.68  E-value=3.5e-15  Score=129.85  Aligned_cols=211  Identities=21%  Similarity=0.194  Sum_probs=153.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      ||||||+|.||.+++++|.++|..|+.+.|+.........       ..++.++.+|+.+.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK-------KLNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH-------HTTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc-------cceEEEEEeecccccccccccccc-----CceE
Confidence            7999999999999999999999998888876554322211       127899999999999999999986     8999


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      +||+|+...  ...+.+.....++.|+.+..++++.+...-         ..++|++||...+... .   -..++++..
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~sS~~~y~~~-~---~~~~~e~~~  133 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLEAAREAG---------VKRFIFLSSASVYGDP-D---GEPIDEDSP  133 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHHHHHHHT---------TSEEEEEEEGGGGTSS-S---SSSBETTSG
T ss_pred             EEEeecccc--cccccccccccccccccccccccccccccc---------cccccccccccccccc-c---ccccccccc
Confidence            999999753  112225667788889888888888887542         3599999996655432 1   112333444


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc---ccCchhHHHHHHHHhh-------------hh
Q 020927          192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL---FRNISFFSGLVGLLGK-------------YV  255 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~---~~~~~~~~~~~~~~~~-------------~~  255 (319)
                      ..+...|+.+|...+.+.+.+..+.   +  +++..+.|+.+-.+.   .....+...+......             .-
T Consensus       134 ~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (236)
T PF01370_consen  134 INPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRD  208 (236)
T ss_dssp             CCHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEE
T ss_pred             ccccccccccccccccccccccccc---c--cccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccc
Confidence            4566779999999999998887765   4  888899999998877   2222333333333221             11


Q ss_pred             cCCHHHHHHHHHHHhcCCC
Q 020927          256 IKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~  274 (319)
                      +...+|+|++++.++.++.
T Consensus       209 ~i~v~D~a~~~~~~~~~~~  227 (236)
T PF01370_consen  209 FIHVDDLAEAIVAALENPK  227 (236)
T ss_dssp             EEEHHHHHHHHHHHHHHSC
T ss_pred             eEEHHHHHHHHHHHHhCCC
Confidence            2467999999999996544

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.67  E-value=1.5e-14  Score=133.83  Aligned_cols=215  Identities=18%  Similarity=0.147  Sum_probs=137.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHH---HHHHHHHHhhCC-----C-CceEEEEcCCCCHH------
Q 020927           31 TAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAAC---REVKKAIVKEIP-----N-AKVQAMELDLSSLA------   93 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~---~~~~~~~~~~~~-----~-~~v~~~~~Dl~~~~------   93 (319)
                      +||||||||+||++++++|+++|  .+|+++.|+.+..   +...+.+.....     . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6899999975522   222222221100     1 47899999998652      


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           94 SVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        94 ~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ....+.       ..+|++||||+.....     ..+...+.+|+.++..+++.+...         +..++|++||.+.
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~---------~~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG---------RAKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC---------CCceEEEEccccc
Confidence            332222       3789999999975321     235667789999999988877542         1346999999877


Q ss_pred             ccCCCCCC-cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC----chhHHHHH
Q 020927          174 QFSYPEGI-RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN----ISFFSGLV  248 (319)
Q Consensus       174 ~~~~p~~~-~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~----~~~~~~~~  248 (319)
                      +...+... ..++............|+.+|.+.+.+++.++.    .|  ++++.+.||.+.++....    ..+...+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~  213 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG--LPVTIVRPGRILGNSYTGAINSSDILWRMV  213 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC--CCEEEECCCceeecCCCCCCCchhHHHHHH
Confidence            65321110 111100011112245799999999988766443    36  899999999998752211    12222222


Q ss_pred             HH------Hh-----hhhcCCHHHHHHHHHHHhcC
Q 020927          249 GL------LG-----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       249 ~~------~~-----~~~~~~~~~va~~i~~l~~s  272 (319)
                      ..      .+     ..-+.++++++++++.++..
T Consensus       214 ~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~  248 (367)
T TIGR01746       214 KGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQ  248 (367)
T ss_pred             HHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhC
Confidence            11      11     11256889999999999853

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.66  E-value=1.6e-14  Score=131.68  Aligned_cols=179  Identities=21%  Similarity=0.208  Sum_probs=126.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++|||||+|+||.+++++|+++|++|++++|...........+..   ..++.++.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            489999999999999999999999998887643322222222211   12578889999999999888774     3799


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++|||||.....  .+.+...+.+..|+.+...+++.+...         +..++|++||...+.. +..   ....+..
T Consensus        73 ~vv~~ag~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~ss~~~~g~-~~~---~~~~e~~  137 (328)
T TIGR01179        73 AVIHFAGLIAVG--ESVQDPLKYYRNNVVNTLNLLEAMQQT---------GVKKFIFSSSAAVYGE-PSS---IPISEDS  137 (328)
T ss_pred             EEEECccccCcc--hhhcCchhhhhhhHHHHHHHHHHHHhc---------CCCEEEEecchhhcCC-CCC---CCccccC
Confidence            999999975332  223445677899999999998876432         1358999998765432 111   1122333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      ...+...|+.+|++.+.+++.++++.  .+  +++..+.|+.+-.+
T Consensus       138 ~~~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~  179 (328)
T TIGR01179       138 PLGPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCC
Confidence            34456789999999999998887652  34  77888888777665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.65  E-value=2.7e-14  Score=133.98  Aligned_cols=220  Identities=11%  Similarity=0.057  Sum_probs=139.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++.++||||||+|.||+.++++|+++ |++|++++|+.+............. ..++.++.+|+++.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh-----
Confidence            35578999999999999999999998 5899999987654432211100001 2368999999999988877765     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC-cCc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI-RFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~-~~~  184 (319)
                        .+|+|||+|+...+.. .. +.-.+.+..|+.+..++++++...          ..++|++||...+...++.. +.+
T Consensus        86 --~~d~ViHlAa~~~~~~-~~-~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~vYg~~~~~~~~e~  151 (386)
T PLN02427         86 --MADLTINLAAICTPAD-YN-TRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEVYGKTIGSFLPKD  151 (386)
T ss_pred             --cCCEEEEcccccChhh-hh-hChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeeeeCCCcCCCCCcc
Confidence              5799999999754321 11 122345678999999888776432          24899999987554321100 000


Q ss_pred             C-C---------CCCCC-------CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-------
Q 020927          185 R-I---------NDQSG-------YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-------  240 (319)
Q Consensus       185 ~-~---------~~~~~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-------  240 (319)
                      . +         .+...       ..+...|+.||.+.+.++..++..   .|  +.+..+.|+.+-.+....       
T Consensus       152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~~~~~~~~~~  226 (386)
T PLN02427        152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRMDFIPGIDGP  226 (386)
T ss_pred             cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCCCcccccccc
Confidence            0 0         00000       012346999999999888765543   35  788889999888764210       


Q ss_pred             ---c-hhHHHHHHHH---------h----hhhcCCHHHHHHHHHHHhc
Q 020927          241 ---I-SFFSGLVGLL---------G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       241 ---~-~~~~~~~~~~---------~----~~~~~~~~~va~~i~~l~~  271 (319)
                         . .....+....         .    ..-+..++|+|++++.++.
T Consensus       227 ~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~  274 (386)
T PLN02427        227 SEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIE  274 (386)
T ss_pred             ccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHh
Confidence               0 1111111111         0    1124579999999999884

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.63  E-value=7.5e-14  Score=129.06  Aligned_cols=212  Identities=9%  Similarity=0.039  Sum_probs=137.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC-CHHHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS-SLASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~~i~~~~~  107 (319)
                      ++||||||+|.||+.++++|+++ |++|++++|+.......       .+...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL-------VNHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh-------ccCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            47999999999999999999987 68999999876432211       11346889999998 6666555443       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC-CcCcCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG-IRFDRI  186 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~-~~~~~~  186 (319)
                      ++|+|||+|+...+..  ..++-...+++|+.+..++++++...          +.++|++||...+...+.. .+.++.
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~vyg~~~~~~~~ee~~  135 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMCPDEEFDPEAS  135 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecceeeccCCCcCcCcccc
Confidence            6899999999754321  12344577899999999888877532          2499999998765432221 111110


Q ss_pred             CC--CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--------chhHHHHHHHH-----
Q 020927          187 ND--QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--------ISFFSGLVGLL-----  251 (319)
Q Consensus       187 ~~--~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~-----  251 (319)
                      ..  .....+...|+.||.+.+.+++.++...   +  +.+..+.|+.+-.+....        ..+...+...+     
T Consensus       136 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~  210 (347)
T PRK11908        136 PLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEP  210 (347)
T ss_pred             ccccCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCc
Confidence            00  0011234579999999999888776543   4  556667887775553211        11121222111     


Q ss_pred             --------hhhhcCCHHHHHHHHHHHhcC
Q 020927          252 --------GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 --------~~~~~~~~~~va~~i~~l~~s  272 (319)
                              ...-+...+|++++++.++..
T Consensus       211 ~~~~~~g~~~r~~i~v~D~a~a~~~~~~~  239 (347)
T PRK11908        211 ISLVDGGSQKRAFTDIDDGIDALMKIIEN  239 (347)
T ss_pred             eEEecCCceeeccccHHHHHHHHHHHHhC
Confidence                    112256899999999999854

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.63  E-value=7.9e-15  Score=127.84  Aligned_cols=161  Identities=21%  Similarity=0.225  Sum_probs=126.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|-||..++++|++.|++|++++.-.....+....+       .+.++..|+.|.+-+++++++.     +|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            47999999999999999999999999999987443333332221       1689999999999999999876     89


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |.+||.||....+  .+.+.-.+.++.|+.+++.|++++...-.         .++||-|| ++....|..   ..+.+.
T Consensus        69 daViHFAa~~~Vg--ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv---------~~~vFSSt-AavYG~p~~---~PI~E~  133 (329)
T COG1087          69 DAVVHFAASISVG--ESVQNPLKYYDNNVVGTLNLIEAMLQTGV---------KKFIFSST-AAVYGEPTT---SPISET  133 (329)
T ss_pred             CEEEECccccccc--hhhhCHHHHHhhchHhHHHHHHHHHHhCC---------CEEEEecc-hhhcCCCCC---cccCCC
Confidence            9999999975444  34567789999999999999998877642         36666555 555544543   345566


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhc
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                      ....+...|+.||.+.+.+.+.+++...
T Consensus       134 ~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         134 SPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            6666788999999999999999888765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.59  E-value=1.4e-13  Score=137.93  Aligned_cols=220  Identities=14%  Similarity=0.028  Sum_probs=144.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR--GVHVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++|+||||||+|.||+.++++|+++  |++|+.++|..  +....    +.......++.++.+|+++.+.+..++.. 
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHhh-
Confidence            46789999999999999999999998  57899888753  11111    11111134688999999999887766542 


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                          .++|+|||+|+......  ..+...+.+++|+.++..+++++...-        ...++|++||...+........
T Consensus        79 ----~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~vkr~I~~SS~~vyg~~~~~~~  144 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVTG--------QIRRFIHVSTDEVYGETDEDAD  144 (668)
T ss_pred             ----cCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEEcchHHhCCCccccc
Confidence                27999999999753321  122335678999999999988875421        1359999999876543221110


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh----------
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG----------  252 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----------  252 (319)
                       .+..+.....+...|+.+|.+.+.+++.+..++   +  +.+..+.|+.+-.+..........+.....          
T Consensus       145 -~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~  218 (668)
T PLN02260        145 -VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGD  218 (668)
T ss_pred             -cCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecC
Confidence             011222233355689999999999998776654   4  777788998887654221111111111110          


Q ss_pred             ---hhhcCCHHHHHHHHHHHhc
Q 020927          253 ---KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ---~~~~~~~~~va~~i~~l~~  271 (319)
                         ..-+...+|+|++++.++.
T Consensus       219 g~~~r~~ihV~Dva~a~~~~l~  240 (668)
T PLN02260        219 GSNVRSYLYCEDVAEAFEVVLH  240 (668)
T ss_pred             CCceEeeEEHHHHHHHHHHHHh
Confidence               1123578999999998874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.57  E-value=1.3e-13  Score=128.50  Aligned_cols=214  Identities=15%  Similarity=0.075  Sum_probs=139.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|+||||||+|.||+++++.|.++|++|++++|......   .   ..  ...+.++.+|+++.+.+.+++.       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~---~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---S---ED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---c---cc--cccceEEECCCCCHHHHHHHHh-------
Confidence            6799999999999999999999999999999998643210   0   00  1125678899999887766654       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+|||.|+...... .........+..|+.++.++++++...         .-.++|++||...+........--.+.
T Consensus        85 ~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~---------~vk~~V~~SS~~vYg~~~~~~~~~~~~  154 (370)
T PLN02695         85 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN---------GVKRFFYASSACIYPEFKQLETNVSLK  154 (370)
T ss_pred             CCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh---------CCCEEEEeCchhhcCCccccCcCCCcC
Confidence            6899999998643211 111223455778999999998877532         134999999977554221100000111


Q ss_pred             CCC--CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-------c-hhHHHHHHH---H---
Q 020927          188 DQS--GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-------I-SFFSGLVGL---L---  251 (319)
Q Consensus       188 ~~~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-------~-~~~~~~~~~---~---  251 (319)
                      +..  ...+...|+.+|.+.+.+++.++..+   |  +.+..+.|+.+-.+....       . .+.......   +   
T Consensus       155 E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  229 (370)
T PLN02695        155 ESDAWPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMW  229 (370)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEe
Confidence            111  34456789999999999888776543   5  778888998887764210       0 122222111   0   


Q ss_pred             h----hhhcCCHHHHHHHHHHHhc
Q 020927          252 G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 ~----~~~~~~~~~va~~i~~l~~  271 (319)
                      .    ..-+...+|++++++.++.
T Consensus       230 g~g~~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        230 GDGKQTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             CCCCeEEeEEeHHHHHHHHHHHHh
Confidence            0    1223578999999998874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.57  E-value=1.5e-13  Score=124.70  Aligned_cols=211  Identities=20%  Similarity=0.131  Sum_probs=142.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .||||||+|.||..++++|.++|++|+.++|.........         ..+.++.+|+++.+.+.++++..     . |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-C
Confidence            3999999999999999999999999999999765433211         35788999999986655555522     2 9


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC-
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ-  189 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~-  189 (319)
                      .+||+|+.......... .....+.+|+.++.++++++...         ...++|+.||.+........   ..+.++ 
T Consensus        67 ~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~~---------~~~~~v~~ss~~~~~~~~~~---~~~~E~~  133 (314)
T COG0451          67 AVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARAA---------GVKRFVFASSVSVVYGDPPP---LPIDEDL  133 (314)
T ss_pred             EEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCCCceECCCCCC---CCccccc
Confidence            99999997654332222 44568999999999999999771         25589996665655432111   012222 


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHH----HHHHHh--hh------
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSG----LVGLLG--KY------  254 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~----~~~~~~--~~------  254 (319)
                      ....+...|+.+|.+.+.++.....   ..|  +.+..+.|+.+-.+.....   .....    .....+  ..      
T Consensus       134 ~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (314)
T COG0451         134 GPPRPLNPYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ  208 (314)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCce
Confidence            2333344799999999999988777   445  7788888887765543321   11111    111111  00      


Q ss_pred             --hcCCHHHHHHHHHHHhcCCC
Q 020927          255 --VIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       255 --~~~~~~~va~~i~~l~~s~~  274 (319)
                        .+...+|++++++.++..+.
T Consensus       209 ~~~~i~v~D~a~~~~~~~~~~~  230 (314)
T COG0451         209 TRDFVYVDDVADALLLALENPD  230 (314)
T ss_pred             eEeeEeHHHHHHHHHHHHhCCC
Confidence              13458999999999995433

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.56  E-value=2.9e-13  Score=121.64  Aligned_cols=188  Identities=20%  Similarity=0.196  Sum_probs=130.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++|||||+|.||.+++++|+++|++|++++|+                       .+|+.+.+++.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            38999999999999999999999999999885                       36999999998887753     689


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||+|+.....  .........+++|+.++.++++++...          +.++|++||...+.....    ..+++..
T Consensus        53 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~~~~----~~~~E~~  116 (287)
T TIGR01214        53 AVVNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDGEGK----RPYREDD  116 (287)
T ss_pred             EEEECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecCCCC----CCCCCCC
Confidence            999999964321  112335567899999999999887532          238999999765532111    1122222


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh-----------hhhcCCH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG-----------KYVIKNV  259 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-----------~~~~~~~  259 (319)
                      ...+...|+.+|.+.+.+++.+       +  ..+..+.|+.+-.+... ..+...+.....           ...+...
T Consensus       117 ~~~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  186 (287)
T TIGR01214       117 ATNPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGGGG-RNFVRTMLRLAGRGEELRVVDDQIGSPTYA  186 (287)
T ss_pred             CCCCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCCCC-CCHHHHHHHHhhcCCCceEecCCCcCCcCH
Confidence            3344568999999999877654       3  45667889988766521 111222221111           1112457


Q ss_pred             HHHHHHHHHHhcC
Q 020927          260 EQGAATTCYVALH  272 (319)
Q Consensus       260 ~~va~~i~~l~~s  272 (319)
                      +|++++++.++..
T Consensus       187 ~Dva~a~~~~~~~  199 (287)
T TIGR01214       187 KDLARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999999853

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.55  E-value=1.6e-13  Score=128.70  Aligned_cols=196  Identities=19%  Similarity=0.133  Sum_probs=133.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHH--HHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACRE--VKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++++|||||+|+||++++++|+++|++|++++|+.+....  ....+...  ..++.++.+|+++++++.++++.+  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh--
Confidence            467899999999999999999999999999999998765431  11111111  236889999999999999888754  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                       ..++|+||||++....       .....+++|+.+..++++++...         +.+++|++||.....         
T Consensus       134 -~~~~D~Vi~~aa~~~~-------~~~~~~~vn~~~~~~ll~aa~~~---------gv~r~V~iSS~~v~~---------  187 (390)
T PLN02657        134 -GDPVDVVVSCLASRTG-------GVKDSWKIDYQATKNSLDAGREV---------GAKHFVLLSAICVQK---------  187 (390)
T ss_pred             -CCCCcEEEECCccCCC-------CCccchhhHHHHHHHHHHHHHHc---------CCCEEEEEeeccccC---------
Confidence             1269999999985221       12345678888888877776432         245899999976543         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH-----HHhhh-----
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG-----LLGKY-----  254 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~-----  254 (319)
                               +...|..+|...+...+.     ...+  +....|.|+.+-.++..   .......     .+..+     
T Consensus       188 ---------p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~~~~---~~~~~~~g~~~~~~GdG~~~~~  248 (390)
T PLN02657        188 ---------PLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKSLGG---QVEIVKDGGPYVMFGDGKLCAC  248 (390)
T ss_pred             ---------cchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcccHH---HHHhhccCCceEEecCCccccc
Confidence                     234678899888876543     2345  88888999776543211   1111110     01111     


Q ss_pred             hcCCHHHHHHHHHHHhc
Q 020927          255 VIKNVEQGAATTCYVAL  271 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~  271 (319)
                      .....+|+|+.++.++.
T Consensus       249 ~~I~v~DlA~~i~~~~~  265 (390)
T PLN02657        249 KPISEADLASFIADCVL  265 (390)
T ss_pred             CceeHHHHHHHHHHHHh
Confidence            12467899999999884

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.54  E-value=1.6e-13  Score=137.05  Aligned_cols=211  Identities=12%  Similarity=0.061  Sum_probs=140.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHH-HHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLAS-VRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~i~~  104 (319)
                      -++++||||||+|.||..++++|+++ |++|+.++|........       .+..++.++.+|+++... ++++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcHHHHHHHhc----
Confidence            46789999999999999999999986 68999999976432211       113368889999998655 343333    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|++||+|+...+..  ..+.....+++|+.++.++++++...          ..++|++||...+......    
T Consensus       382 ---~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~----------~~~~V~~SS~~vyg~~~~~----  442 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY----------NKRIIFPSTSEVYGMCTDK----  442 (660)
T ss_pred             ---CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc----------CCeEEEEcchhhcCCCCCC----
Confidence               6899999999755421  11233467899999999999887642          2489999998665432111    


Q ss_pred             CCCCCC------C-CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--------chhHHHHHH
Q 020927          185 RINDQS------G-YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--------ISFFSGLVG  249 (319)
Q Consensus       185 ~~~~~~------~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~  249 (319)
                      .++++.      . ..+...|+.||.+.+.+++.+++.+   |  +++..+.|+.+-.+....        ......+..
T Consensus       443 ~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~  517 (660)
T PRK08125        443 YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_pred             CcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence            011111      1 1233579999999999998876654   4  777788898887664221        011111111


Q ss_pred             HH---------h----hhhcCCHHHHHHHHHHHhcC
Q 020927          250 LL---------G----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       250 ~~---------~----~~~~~~~~~va~~i~~l~~s  272 (319)
                      ..         .    ..-+..++|++++++.++..
T Consensus       518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~  553 (660)
T PRK08125        518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN  553 (660)
T ss_pred             HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence            11         0    11245789999999988853

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.52  E-value=1.5e-12  Score=123.80  Aligned_cols=217  Identities=15%  Similarity=0.099  Sum_probs=136.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+.-++++||||||+|.||+.++++|+++|++|++++|......+.   +.......++.++..|+.+..     +   
T Consensus       113 ~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l---  181 (442)
T PLN02206        113 LGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L---  181 (442)
T ss_pred             cccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h---
Confidence            33555789999999999999999999999999999998753221111   111112346788889987652     1   


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC-C
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG-I  181 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~-~  181 (319)
                          ..+|+|||+|+...+..  ..++..+.+++|+.++.++++++...          +.++|++||...+...... .
T Consensus       182 ----~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        182 ----LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             ----cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChHHhCCCCCCCC
Confidence                15899999999654321  11234578899999999999888542          2389999998766421110 0


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc--CchhHHHHHHHH--------
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR--NISFFSGLVGLL--------  251 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~--------  251 (319)
                      +.+.........+...|+.+|.+.+.++..+.+.+   +  +.+..+.|+.+-.+...  .......+....        
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i  320 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV  320 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEE
Confidence            00000011122334679999999998887765543   4  66666777766554321  111111111111        


Q ss_pred             -h----hhhcCCHHHHHHHHHHHhc
Q 020927          252 -G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 -~----~~~~~~~~~va~~i~~l~~  271 (319)
                       .    ..-+..++|+|++++.++.
T Consensus       321 ~g~G~~~rdfi~V~Dva~ai~~a~e  345 (442)
T PLN02206        321 YGDGKQTRSFQFVSDLVEGLMRLME  345 (442)
T ss_pred             eCCCCEEEeEEeHHHHHHHHHHHHh
Confidence             0    1124578999999998874

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.52  E-value=1.7e-12  Score=117.98  Aligned_cols=206  Identities=12%  Similarity=0.022  Sum_probs=131.2

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           32 AIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ||||||+|.||.++++.|+++|+ .|++++|..... .. ..+     .  ...+..|+.+.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-----~--~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-----A--DLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-----h--heeeeccCcchhHHHHHHhh---ccCCCC
Confidence            69999999999999999999998 788887654321 11 111     1  13466788887776665542   345899


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||+|+....    +.++....+++|+.+..++++++...          ..++|++||...+......     +.++.
T Consensus        69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~vy~~~~~~-----~~e~~  129 (314)
T TIGR02197        69 AIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAATYGDGEAG-----FREGR  129 (314)
T ss_pred             EEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHhcCCCCCC-----ccccc
Confidence            99999996422    23455778899999999999887642          2389999997755422111     11111


Q ss_pred             C-CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC---c-hhHHHHHHHHh-------------
Q 020927          191 G-YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN---I-SFFSGLVGLLG-------------  252 (319)
Q Consensus       191 ~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~---~-~~~~~~~~~~~-------------  252 (319)
                      . ..+...|+.+|.+.+.+++....... .+  +.+..+.|+.+-.+....   . .....+.....             
T Consensus       130 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (314)
T TIGR02197       130 ELERPLNVYGYSKFLFDQYVRRRVLPEA-LS--AQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEG  206 (314)
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHhHhhc-cC--CceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccc
Confidence            1 23566899999999988875332211 12  566667777766553211   0 11112111110             


Q ss_pred             ------hhhcCCHHHHHHHHHHHhc
Q 020927          253 ------KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ------~~~~~~~~~va~~i~~l~~  271 (319)
                            ..-+...+|++++++.++.
T Consensus       207 ~~~g~~~~~~i~v~D~a~~i~~~~~  231 (314)
T TIGR02197       207 FKDGEQLRDFVYVKDVVDVNLWLLE  231 (314)
T ss_pred             cCCCCceeeeEEHHHHHHHHHHHHh
Confidence                  0124578999999999984

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.52  E-value=3.4e-13  Score=118.77  Aligned_cols=170  Identities=21%  Similarity=0.200  Sum_probs=127.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+++||||||+|-||.+.+.+|.++|+.|++++.-........+.+++... +..+.++..|+.|.+.+++++++.    
T Consensus         1 ~~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----   76 (343)
T KOG1371|consen    1 GGKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----   76 (343)
T ss_pred             CCcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc----
Confidence            368999999999999999999999999999998533322333333333321 578999999999999999999987    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|.|+|-|+.....+  +.+...+.+++|+.|+++++..+..+-         -..+|+.||..-+. .|..+-+.  
T Consensus        77 -~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssatvYG-~p~~ip~t--  141 (343)
T KOG1371|consen   77 -KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSATVYG-LPTKVPIT--  141 (343)
T ss_pred             -CCceEEeehhhhccch--hhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEecceeeec-Ccceeecc--
Confidence             7999999999765443  335558899999999999998876653         34788888866554 34433222  


Q ss_pred             CCCCCC-CccccchhhHHHHHHHHHHHHHHhc
Q 020927          187 NDQSGY-NRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       187 ~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                       +.... .+.+.|+.+|.+++..+..+...+.
T Consensus       142 -e~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  142 -EEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             -CcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence             22222 3678899999999999988877655

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.50  E-value=4e-13  Score=122.07  Aligned_cols=205  Identities=17%  Similarity=0.114  Sum_probs=130.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh--cCCCc
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS--SGLPL  109 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~--~~~~i  109 (319)
                      ||||||+|.||+.++++|+++|++++++.|+.......            ..+..+|+.+..+.+.+++.+.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766665543221110            01233577766666666555532  34589


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+|+..... ..   +-...++.|+.++.++++++...          +.++|++||...+.....    ...++.
T Consensus        70 d~Vih~A~~~~~~-~~---~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg~~~~----~~~~E~  131 (308)
T PRK11150         70 EAIFHEGACSSTT-EW---DGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTD----DFIEER  131 (308)
T ss_pred             cEEEECceecCCc-CC---ChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhCcCCC----CCCccC
Confidence            9999999864332 11   12357899999999998887532          237999999876643211    112233


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHh-------------
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLG-------------  252 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-------------  252 (319)
                      ....+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+-.+.....    .....+...+.             
T Consensus       132 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~  206 (308)
T PRK11150        132 EYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSEN  206 (308)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCc
Confidence            334456789999999998887765542   4  7777788887766542211    11111111110             


Q ss_pred             -hhhcCCHHHHHHHHHHHhc
Q 020927          253 -KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 -~~~~~~~~~va~~i~~l~~  271 (319)
                       ..-+..++|++++++.++.
T Consensus       207 ~~r~~i~v~D~a~a~~~~~~  226 (308)
T PRK11150        207 FKRDFVYVGDVAAVNLWFWE  226 (308)
T ss_pred             eeeeeeeHHHHHHHHHHHHh
Confidence             1123578999999988874

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.49  E-value=1.1e-12  Score=119.81  Aligned_cols=183  Identities=14%  Similarity=0.081  Sum_probs=122.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +|+||||||.||+.++++|+++|++|++++|+.+......        ...+.++.+|+++++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~--------~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK--------EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh--------hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            6999999999999999999999999999999875432211        2258899999999998877765       689


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||+++...       .+....+++|+.+..++++++...-         -.++|++||..+..               
T Consensus        67 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~g---------vkr~I~~Ss~~~~~---------------  115 (317)
T CHL00194         67 AIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAAK---------IKRFIFFSILNAEQ---------------  115 (317)
T ss_pred             EEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHcC---------CCEEEEeccccccc---------------
Confidence            9999876421       1234567788888888887775431         34999999864331               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----H----hhhhcCCHHHH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----L----GKYVIKNVEQG  262 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~----~~~~~~~~~~v  262 (319)
                       + +...|..+|...+.+.+       ..+  +....+.|+.+-.++....  .......    +    ....+...+|+
T Consensus       116 -~-~~~~~~~~K~~~e~~l~-------~~~--l~~tilRp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~Dv  182 (317)
T CHL00194        116 -Y-PYIPLMKLKSDIEQKLK-------KSG--IPYTIFRLAGFFQGLISQY--AIPILEKQPIWITNESTPISYIDTQDA  182 (317)
T ss_pred             -c-CCChHHHHHHHHHHHHH-------HcC--CCeEEEeecHHhhhhhhhh--hhhhccCCceEecCCCCccCccCHHHH
Confidence             0 12457788888776543       235  6666788875432221110  0000000    0    01122467999


Q ss_pred             HHHHHHHhcC
Q 020927          263 AATTCYVALH  272 (319)
Q Consensus       263 a~~i~~l~~s  272 (319)
                      |+.++.++..
T Consensus       183 a~~~~~~l~~  192 (317)
T CHL00194        183 AKFCLKSLSL  192 (317)
T ss_pred             HHHHHHHhcC
Confidence            9999998843

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.48  E-value=6.7e-13  Score=120.25  Aligned_cols=142  Identities=17%  Similarity=0.156  Sum_probs=103.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|.||++++++|+++| +|+.++|...                   .+..|++|.+.+.++++..     ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            369999999999999999999999 7888887521                   2357999999998888753     68


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|+......  ..+.-...+.+|+.++.++++++...          +.++|++||..-+.....    ....+.
T Consensus        56 D~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy~~~~~----~p~~E~  119 (299)
T PRK09987         56 DVIVNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVFPGTGD----IPWQET  119 (299)
T ss_pred             CEEEECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEECCCCC----CCcCCC
Confidence            99999999754321  12233566789999999999887642          238999998765532211    112233


Q ss_pred             CCCCccccchhhHHHHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSEL  212 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~l  212 (319)
                      ....+...|+.+|.+.+.+++.+
T Consensus       120 ~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987        120 DATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHh
Confidence            34456678999999999887654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.45  E-value=4e-12  Score=120.71  Aligned_cols=216  Identities=15%  Similarity=0.103  Sum_probs=136.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.-+.++||||||+|.||+.++++|+++|++|++++|...........+   ....++.++..|+.+..     +    
T Consensus       115 ~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~---~~~~~~~~~~~Di~~~~-----~----  182 (436)
T PLN02166        115 GIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL---FGNPRFELIRHDVVEPI-----L----  182 (436)
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh---ccCCceEEEECcccccc-----c----
Confidence            34456789999999999999999999999999999997532211111111   11336788888987642     1    


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC-Cc
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG-IR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~-~~  182 (319)
                         .++|+|||+|+...+...  ..+-...+++|+.++.++++++...          ..++|++||...+...... .+
T Consensus       183 ---~~~D~ViHlAa~~~~~~~--~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~VYg~~~~~p~~  247 (436)
T PLN02166        183 ---LEVDQIYHLACPASPVHY--KYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEVYGDPLEHPQK  247 (436)
T ss_pred             ---cCCCEEEECceeccchhh--ccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHHhCCCCCCCCC
Confidence               268999999986543211  1234578899999999999887643          2389999997765421110 00


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc--Cc----hhHHHHHHH-----H
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR--NI----SFFSGLVGL-----L  251 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~--~~----~~~~~~~~~-----~  251 (319)
                      .+.........+...|+.+|.+.+.+++.+.+.+   +  +.+..+.|+.+-.+...  ..    .+...+...     .
T Consensus       248 E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~  322 (436)
T PLN02166        248 ETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY  322 (436)
T ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence            0100111233345679999999999888776653   4  66666777766655321  11    111122111     0


Q ss_pred             h----hhhcCCHHHHHHHHHHHhc
Q 020927          252 G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 ~----~~~~~~~~~va~~i~~l~~  271 (319)
                      .    ..-+...+|++++++.++.
T Consensus       323 g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        323 GDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHh
Confidence            1    1224578999999988874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.42  E-value=5.2e-12  Score=105.84  Aligned_cols=182  Identities=23%  Similarity=0.202  Sum_probs=124.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.+.          ..++..+.+|+.+++++.+.+.       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            7999999999999999999999999999999987665          4579999999999988888777       7899


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      +|+++|....      +             ...++.+++.+++.     ...++|++|+.......+...  .    ...
T Consensus        64 vi~~~~~~~~------~-------------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~~~--~----~~~  113 (183)
T PF13460_consen   64 VIHAAGPPPK------D-------------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPGLF--S----DED  113 (183)
T ss_dssp             EEECCHSTTT------H-------------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTSEE--E----GGT
T ss_pred             hhhhhhhhcc------c-------------cccccccccccccc-----ccccceeeeccccCCCCCccc--c----ccc
Confidence            9999985222      0             44556666666554     255999999888665333210  0    000


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhc
Q 020927          192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~  271 (319)
                      ...+..|...|...+.+.       ...+  ++...+.||.+-.+..........  .........+.+|+|+.++.++.
T Consensus       114 ~~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  114 KPIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSRSYRLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             CGGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSSSEEEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCcceeEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            111234555665544333       2346  888889999988775332211111  11112244689999999999873

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.42  E-value=2.5e-11  Score=121.50  Aligned_cols=176  Identities=20%  Similarity=0.172  Sum_probs=116.7

Q ss_pred             EEEEeCCCCchhHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH--HHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLA--LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASV--RKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La--~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v--~~~~~~i~~~~  106 (319)
                      +||||||+|.||++++++|+  +.|++|++++|+... ... ..+.......++.++.+|+++++..  ...++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  578999999996532 111 1222222225789999999985310  1112222    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      .++|++||+|+.....     ......+++|+.++..+++.+...         ...++|++||...+...++..+.++.
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~~SS~~v~g~~~~~~~e~~~  141 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL---------QAATFHHVSSIAVAGDYEGVFREDDF  141 (657)
T ss_pred             cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc---------CCCeEEEEeccccccCccCccccccc
Confidence            3799999999964321     223557788999998888876532         24589999998766533322111111


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      .  ........|+.+|...+.+++.      ..|  +.+..+.|+.+-.+
T Consensus       142 ~--~~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~  181 (657)
T PRK07201        142 D--EGQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGD  181 (657)
T ss_pred             h--hhcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeec
Confidence            1  1122235799999999987742      235  78888999988664

>PLN02996 fatty acyl-CoA reductase

Probab=99.42  E-value=1e-11  Score=119.75  Aligned_cols=218  Identities=14%  Similarity=0.143  Sum_probs=137.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHHH---------HhhCC-------CCceEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMA---ACREVKKAI---------VKEIP-------NAKVQA   84 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~~~~-------~~~v~~   84 (319)
                      ++||+|+||||||.||..++++|++.+.   +|+++.|...   ..+....++         .+..+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6899999999999999999999998642   6888888542   111211111         11111       157899


Q ss_pred             EEcCCCC-------HHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccc
Q 020927           85 MELDLSS-------LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTAR  157 (319)
Q Consensus        85 ~~~Dl~~-------~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~  157 (319)
                      +.+|+++       .+.++.+++       .+|++||+|+.....     +.....+++|+.|+.++++.+...-     
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~-----  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKCV-----  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            9999984       333444443       689999999975421     3567789999999999998876531     


Q ss_pred             cCCCCCeEEEeCCcccccCCCCCCc---Cc-----------CCCC-------------------------------CC--
Q 020927          158 ESSKEGRIVNVSSRRHQFSYPEGIR---FD-----------RIND-------------------------------QS--  190 (319)
Q Consensus       158 ~~~~~~~ii~isS~~~~~~~p~~~~---~~-----------~~~~-------------------------------~~--  190 (319)
                         ...++|++||...+....+.+.   +.           |+++                               ..  
T Consensus       152 ---~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        152 ---KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             ---CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence               1348999999876643221100   00           0000                               00  


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhH------HHHHHHHh-----------
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFF------SGLVGLLG-----------  252 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~------~~~~~~~~-----------  252 (319)
                      .......|+.||++.+.+++..    + .+  +.+..+.|..|-.+...+. ++.      ..+.....           
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~----~-~~--lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg  301 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNF----K-EN--LPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADP  301 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHh----c-CC--CCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCC
Confidence            1112246999999999988543    2 25  8888899999977653322 111      11111000           


Q ss_pred             --hhhcCCHHHHHHHHHHHhc
Q 020927          253 --KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 --~~~~~~~~~va~~i~~l~~  271 (319)
                        ..-+.++++++++++.++.
T Consensus       302 ~~~~D~v~Vddvv~a~l~a~~  322 (491)
T PLN02996        302 NSVLDVIPADMVVNAMIVAMA  322 (491)
T ss_pred             CeecceecccHHHHHHHHHHH
Confidence              1223578999999988874

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=1.1e-12  Score=115.73  Aligned_cols=177  Identities=21%  Similarity=0.192  Sum_probs=102.5

Q ss_pred             EeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHH---HHHHHHHHHhhC--------CCCceEEEEcCCCCHH------H
Q 020927           34 VTGASSGIGTETARVLALRGV--HVVMAVRNMAA---CREVKKAIVKEI--------PNAKVQAMELDLSSLA------S   94 (319)
Q Consensus        34 ItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~---~~~~~~~~~~~~--------~~~~v~~~~~Dl~~~~------~   94 (319)
                      ||||||.||..++++|++++.  +|+++.|..+.   .++..+.+.+..        ...+++++.+|++++.      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999996532   223322222110        1568999999999853      3


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927           95 VRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...+.+       .+|++||||+.....     ..+.+.+++|+.|+..+++.+...         +..++++|||....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-----~~~~~~~~~NV~gt~~ll~la~~~---------~~~~~~~iSTa~v~  139 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-----APYSELRAVNVDGTRNLLRLAAQG---------KRKRFHYISTAYVA  139 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSS---------S---EEEEEEGGGT
T ss_pred             hhcccc-------ccceeeecchhhhhc-----ccchhhhhhHHHHHHHHHHHHHhc---------cCcceEEecccccc
Confidence            444433       679999999965332     245668899999999999888621         23399999993222


Q ss_pred             cCCCCCCc-----CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          175 FSYPEGIR-----FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       175 ~~~p~~~~-----~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      ...++...     .+.............|..||...+.+++..+.+   .|  +.+..+.||.+-..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g--~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  140 GSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HG--LPVTIYRPGIIVGD  201 (249)
T ss_dssp             TS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H-----EEEEEE-EEE-S
T ss_pred             CCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CC--ceEEEEecCccccc
Confidence            22111110     112223333444568999999999988776654   24  77888999998763

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.40  E-value=3.4e-12  Score=115.59  Aligned_cols=193  Identities=15%  Similarity=0.095  Sum_probs=128.1

Q ss_pred             EEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEE
Q 020927           33 IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNIL  112 (319)
Q Consensus        33 lItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~l  112 (319)
                      |||||+|.||..+++.|+++|++|+++.+.                      ..+|+++.+++.++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987766432                      137999999988887753     68999


Q ss_pred             EEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC--
Q 020927          113 INNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS--  190 (319)
Q Consensus       113 v~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~--  190 (319)
                      ||+|+....... ..+.....+++|+.++..+++++...         .-.++|++||..-+.+.+.    ..++++.  
T Consensus        54 ih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~---------~~~~~i~~SS~~vyg~~~~----~~~~E~~~~  119 (306)
T PLN02725         54 ILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRH---------GVKKLLFLGSSCIYPKFAP----QPIPETALL  119 (306)
T ss_pred             EEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHc---------CCCeEEEeCceeecCCCCC----CCCCHHHhc
Confidence            999997432111 11233467889999999999888653         1358999999765442211    1111111  


Q ss_pred             --CCCcc-ccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC----chhHHHHHHH------------H
Q 020927          191 --GYNRF-SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN----ISFFSGLVGL------------L  251 (319)
Q Consensus       191 --~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~------------~  251 (319)
                        ...+. ..|+.||.+.+.+++.+..++   +  +++..+.|+.+-.+....    ......+...            +
T Consensus       120 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (306)
T PLN02725        120 TGPPEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVV  194 (306)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEE
Confidence              12222 349999999998887776554   4  778889998887664210    0111111110            0


Q ss_pred             --h----hhhcCCHHHHHHHHHHHhc
Q 020927          252 --G----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 --~----~~~~~~~~~va~~i~~l~~  271 (319)
                        .    ...+..++|++++++.++.
T Consensus       195 ~~~~g~~~~~~i~v~Dv~~~~~~~~~  220 (306)
T PLN02725        195 VWGSGSPLREFLHVDDLADAVVFLMR  220 (306)
T ss_pred             EcCCCCeeeccccHHHHHHHHHHHHh
Confidence              0    1134678999999999984

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.36  E-value=6e-12  Score=113.24  Aligned_cols=187  Identities=22%  Similarity=0.216  Sum_probs=121.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +++|||||+|-||.++++.|.++|+.|+.++|+                       .+|+++.+++.+++++.     ++
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CC
Confidence            379999999999999999999999999999887                       57999999999999987     79


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|++...  +.-...-+..+.+|+.++..+++.+...          +.++|++||..-+.+..+    ....++
T Consensus        53 d~Vin~aa~~~~--~~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~~~----~~y~E~  116 (286)
T PF04321_consen   53 DVVINCAAYTNV--DACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGDKG----GPYTED  116 (286)
T ss_dssp             SEEEE------H--HHHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SSTS----SSB-TT
T ss_pred             CeEeccceeecH--HhhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCCcc----cccccC
Confidence            999999997422  1112345678999999999999988642          569999999765432211    112233


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhh-----------hcCC
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKY-----------VIKN  258 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~  258 (319)
                      ....+...|+-+|...+.+++.    ..+.     ...+.++.+-.+-  ..++...+.......           ....
T Consensus       117 d~~~P~~~YG~~K~~~E~~v~~----~~~~-----~~IlR~~~~~g~~--~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~  185 (286)
T PF04321_consen  117 DPPNPLNVYGRSKLEGEQAVRA----ACPN-----ALILRTSWVYGPS--GRNFLRWLLRRLRQGEPIKLFDDQYRSPTY  185 (286)
T ss_dssp             S----SSHHHHHHHHHHHHHHH----H-SS-----EEEEEE-SEESSS--SSSHHHHHHHHHHCTSEEEEESSCEE--EE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH----hcCC-----EEEEecceecccC--CCchhhhHHHHHhcCCeeEeeCCceeCCEE
Confidence            3445678999999999987755    2221     2235666665552  223344444333211           1135


Q ss_pred             HHHHHHHHHHHhc
Q 020927          259 VEQGAATTCYVAL  271 (319)
Q Consensus       259 ~~~va~~i~~l~~  271 (319)
                      .+++|+.++.++.
T Consensus       186 ~~dlA~~i~~l~~  198 (286)
T PF04321_consen  186 VDDLARVILELIE  198 (286)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7899999999985

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.2e-10  Score=97.06  Aligned_cols=173  Identities=14%  Similarity=0.150  Sum_probs=122.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++++||||+ |+|.++++.|+++|++|++++|+++..+.....+..   ..++.++.+|+++++++.++++.+.+.++++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            469999998 777889999999999999999998776665544421   3478889999999999999999998888999


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++|+.+-..                    ++-.+..++-..-.+     .+..+++.+-+..+..  |           
T Consensus        77 d~lv~~vh~~--------------------~~~~~~~~~~~~gv~-----~~~~~~~h~~gs~~~~--~-----------  118 (177)
T PRK08309         77 DLAVAWIHSS--------------------AKDALSVVCRELDGS-----SETYRLFHVLGSAASD--P-----------  118 (177)
T ss_pred             eEEEEecccc--------------------chhhHHHHHHHHccC-----CCCceEEEEeCCcCCc--h-----------
Confidence            9999877642                    223344444433322     1244677665433321  0           


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYV  269 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l  269 (319)
                                          +.....++...  +.-.-|..|++..+-...+               .+=+|+++.++..
T Consensus       119 --------------------~~~~~~~~~~~--~~~~~i~lgf~~~~~~~rw---------------lt~~ei~~gv~~~  161 (177)
T PRK08309        119 --------------------RIPSEKIGPAR--CSYRRVILGFVLEDTYSRW---------------LTHEEISDGVIKA  161 (177)
T ss_pred             --------------------hhhhhhhhhcC--CceEEEEEeEEEeCCcccc---------------CchHHHHHHHHHH
Confidence                                11122233334  5555678999988765544               5889999999999


Q ss_pred             hcCCCccCCCcc
Q 020927          270 ALHPHVKGLTGS  281 (319)
Q Consensus       270 ~~s~~~~~~~G~  281 (319)
                      +.++....+-|+
T Consensus       162 ~~~~~~~~~~g~  173 (177)
T PRK08309        162 IESDADEHVVGT  173 (177)
T ss_pred             HhcCCCeEEEEE
Confidence            987777776665

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.29  E-value=3.3e-10  Score=102.39  Aligned_cols=181  Identities=22%  Similarity=0.252  Sum_probs=122.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHH---HHHHHHHHHH-----hhCCCCceEEEEcCCCC------HHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMA---ACREVKKAIV-----KEIPNAKVQAMELDLSS------LAS   94 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~---~~~~~~~~~~-----~~~~~~~v~~~~~Dl~~------~~~   94 (319)
                      +++|+|||||.+|.-++.+|+.+- ++|+.+.|-.+   ..+++.+.+.     ++....+++.+..|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999876 48999987433   2333333333     12235689999999994      333


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927           95 VRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+.+.+       .+|.+|||++..+...     .+.+....|+.|+..+++.+...         +...+.+|||++-.
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~-----pYs~L~~~NVlGT~evlrLa~~g---------k~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF-----PYSELRGANVLGTAEVLRLAATG---------KPKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC-----cHHHhcCcchHhHHHHHHHHhcC---------CCceeEEEeeeeec
Confidence            444443       6899999999865532     35677888999999999887642         23359999988754


Q ss_pred             cCC-CC--CCcCcC--CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          175 FSY-PE--GIRFDR--INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       175 ~~~-p~--~~~~~~--~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      ... +.  ..++++  .+...+......|+-||.+.+.+++    +-...|  +.+..+.||++-.+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr----~A~~rG--Lpv~I~Rpg~I~gds  201 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVR----EAGDRG--LPVTIFRPGYITGDS  201 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHH----HHhhcC--CCeEEEecCeeeccC
Confidence            321 11  112221  1222333345679999999887664    455557  778889999996543

>PLN02778 3,5-epimerase/4-reductase

Probab=99.27  E-value=1.5e-10  Score=104.88  Aligned_cols=143  Identities=15%  Similarity=0.098  Sum_probs=91.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+++|||||+|.||..++++|+++|.+|++..                          .|+.+.+.+...++..     +
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----K   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----C
Confidence            46799999999999999999999999886432                          2345555555555432     7


Q ss_pred             ccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC---CCCCCcCc
Q 020927          109 LNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS---YPEGIRFD  184 (319)
Q Consensus       109 id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~---~p~~~~~~  184 (319)
                      +|++||+||...... +...+.-...+++|+.++.++++++...          +-+.+++||...+..   .|.. +-.
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----------gv~~v~~sS~~vy~~~~~~p~~-~~~  126 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----------GLVLTNYATGCIFEYDDAHPLG-SGI  126 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCCEEEEecceEeCCCCCCCcc-cCC
Confidence            899999999754321 1122344678999999999999998653          113455555432211   0100 000


Q ss_pred             CCCCC-CCCCccccchhhHHHHHHHHHHHH
Q 020927          185 RINDQ-SGYNRFSAYGQSKLANVLHTSELA  213 (319)
Q Consensus       185 ~~~~~-~~~~~~~~Y~~sK~a~~~~~~~la  213 (319)
                      .+.++ ....+...|+.||.+.+.+++.++
T Consensus       127 ~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        127 GFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            11211 122233579999999999887754

>PRK05865 hypothetical protein; Provisional

Probab=99.27  E-value=9.2e-11  Score=118.23  Aligned_cols=164  Identities=20%  Similarity=0.152  Sum_probs=116.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++++||||+|+||++++++|+++|++|++++|+....      .     ..++.++.+|+++.+++.++++       .+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CC
Confidence            3699999999999999999999999999999975321      0     2257889999999999888776       58


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|+...+           .+++|+.++.++++++..    .     ..++||++||..                 
T Consensus        63 D~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~~----~-----gvkr~V~iSS~~-----------------  105 (854)
T PRK05865         63 DVVAHCAWVRGR-----------NDHINIDGTANVLKAMAE----T-----GTGRIVFTSSGH-----------------  105 (854)
T ss_pred             CEEEECCCcccc-----------hHHHHHHHHHHHHHHHHH----c-----CCCeEEEECCcH-----------------
Confidence            999999985321           468899998887766543    2     245899999821                 


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH--Hh------hhhcCCHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL--LG------KYVIKNVEQ  261 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~------~~~~~~~~~  261 (319)
                                  |.+.+.+++    +   .+  +.+..+.|+.+-.+....  +...+...  ..      ...+..++|
T Consensus       106 ------------K~aaE~ll~----~---~g--l~~vILRp~~VYGP~~~~--~i~~ll~~~v~~~G~~~~~~dfIhVdD  162 (854)
T PRK05865        106 ------------QPRVEQMLA----D---CG--LEWVAVRCALIFGRNVDN--WVQRLFALPVLPAGYADRVVQVVHSDD  162 (854)
T ss_pred             ------------HHHHHHHHH----H---cC--CCEEEEEeceEeCCChHH--HHHHHhcCceeccCCCCceEeeeeHHH
Confidence                        777666553    2   35  777788898887663221  12111110  11      112457899


Q ss_pred             HHHHHHHHhc
Q 020927          262 GAATTCYVAL  271 (319)
Q Consensus       262 va~~i~~l~~  271 (319)
                      ++++++.++.
T Consensus       163 VA~Ai~~aL~  172 (854)
T PRK05865        163 AQRLLVRALL  172 (854)
T ss_pred             HHHHHHHHHh
Confidence            9999998874

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=1.4e-10  Score=102.11  Aligned_cols=184  Identities=22%  Similarity=0.224  Sum_probs=128.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      +||||++|-+|.+|++.|. .+..|+.++|..                       +|+++++.+.+++++.     +||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            9999999999999999999 667999998874                       7999999999999987     8999


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      +||+|++....  ....+-+..|.+|..++.++++++-..          ..++|++|+..-+-+..+    ..-.++..
T Consensus        54 VIn~AAyt~vD--~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~~----~~Y~E~D~  117 (281)
T COG1091          54 VINAAAYTAVD--KAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEKG----GPYKETDT  117 (281)
T ss_pred             EEECccccccc--cccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCCC----CCCCCCCC
Confidence            99999974332  223446788999999999999998654          558999998764432111    01122334


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------hhcCCHH
Q 020927          192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------YVIKNVE  260 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~~  260 (319)
                      -++...||.||.+-+..++...    ++.  +   .+...++-.....+  |...+.+....           +.-...+
T Consensus       118 ~~P~nvYG~sKl~GE~~v~~~~----~~~--~---I~Rtswv~g~~g~n--Fv~tml~la~~~~~l~vv~Dq~gsPt~~~  186 (281)
T COG1091         118 PNPLNVYGRSKLAGEEAVRAAG----PRH--L---ILRTSWVYGEYGNN--FVKTMLRLAKEGKELKVVDDQYGSPTYTE  186 (281)
T ss_pred             CCChhhhhHHHHHHHHHHHHhC----CCE--E---EEEeeeeecCCCCC--HHHHHHHHhhcCCceEEECCeeeCCccHH
Confidence            4567899999999998775533    332  1   13334443333222  22222222111           1113678


Q ss_pred             HHHHHHHHHhc
Q 020927          261 QGAATTCYVAL  271 (319)
Q Consensus       261 ~va~~i~~l~~  271 (319)
                      ++|+.+..++.
T Consensus       187 dlA~~i~~ll~  197 (281)
T COG1091         187 DLADAILELLE  197 (281)
T ss_pred             HHHHHHHHHHh
Confidence            99999999884

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.24  E-value=1.6e-10  Score=105.21  Aligned_cols=187  Identities=16%  Similarity=0.141  Sum_probs=127.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++.++|||||+|.+|+.++++|.+++  .+|.+++..+..-. ..++.... ...++.++.+|+.+..++.+.+.    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGF-RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcc-cCCceeEEecchhhhhhhhhhcc----
Confidence            357899999999999999999999999  58999988664111 01111000 15679999999999988888766    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++ .+||+|....+..  -..+-+..+++|+.|+.+++..+...-         -.++|++||..-..+... +...
T Consensus        76 ---~~-~Vvh~aa~~~~~~--~~~~~~~~~~vNV~gT~nvi~~c~~~~---------v~~lIYtSs~~Vvf~g~~-~~n~  139 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPDF--VENDRDLAMRVNVNGTLNVIEACKELG---------VKRLIYTSSAYVVFGGEP-IING  139 (361)
T ss_pred             ---Cc-eEEEeccccCccc--cccchhhheeecchhHHHHHHHHHHhC---------CCEEEEecCceEEeCCee-cccC
Confidence               56 6666665433322  122567889999999999998887764         349999999886654222 1111


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                      +-+..-.......|+.||+-.+.+++..+.   ..+  ....++.|-.|-.+.-+.
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~--l~T~aLR~~~IYGpgd~~  190 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANG---SDD--LYTCALRPPGIYGPGDKR  190 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcC---CCC--eeEEEEccccccCCCCcc
Confidence            111111122346899999999988865443   334  888899998887665443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.21  E-value=3.1e-10  Score=101.89  Aligned_cols=204  Identities=11%  Similarity=0.004  Sum_probs=111.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      ||||||+|.||..+++.|+++|++|++++|+.+......        .  ..+  .|+.. ...       .+....+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~~--~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EGY--KPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--eee--ecccc-cch-------hhhcCCCCE
Confidence            689999999999999999999999999999875432110        0  011  12221 111       123347999


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      |||+||........+.+.....+++|+.++..+++++...-.       +...+|+.|+...+.....    ..+.+...
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-------~~~~~i~~S~~~~yg~~~~----~~~~E~~~  129 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ-------KPKVFISASAVGYYGTSED----RVFTEEDS  129 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC-------CceEEEEeeeEEEeCCCCC----CCcCcccC
Confidence            999999643221222234456788899998888887754310       0123444444333321111    11112211


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH-----Hh----hhhcCCHHHH
Q 020927          192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL-----LG----KYVIKNVEQG  262 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~~----~~~~~~~~~v  262 (319)
                      ..+...|+..+...+....    .+...+  +.+..+.|+.+-.+..............     +.    ..-+...+|+
T Consensus       130 ~~~~~~~~~~~~~~e~~~~----~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dv  203 (292)
T TIGR01777       130 PAGDDFLAELCRDWEEAAQ----AAEDLG--TRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDL  203 (292)
T ss_pred             CCCCChHHHHHHHHHHHhh----hchhcC--CceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHH
Confidence            1122233333433333322    223345  8888999999977632111111111110     11    1234688999


Q ss_pred             HHHHHHHhcC
Q 020927          263 AATTCYVALH  272 (319)
Q Consensus       263 a~~i~~l~~s  272 (319)
                      |+.++.++..
T Consensus       204 a~~i~~~l~~  213 (292)
T TIGR01777       204 VQLILFALEN  213 (292)
T ss_pred             HHHHHHHhcC
Confidence            9999999853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.18  E-value=3.4e-09  Score=84.46  Aligned_cols=216  Identities=15%  Similarity=0.056  Sum_probs=149.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC-
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG-  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~-  106 (319)
                      +-.+|+|-||-+.+|.+++..|-.+++-|.-++-++..-            ...-+.+..|-+=.++-+.+.+++-+.. 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            446799999999999999999999999888877654210            1123445555554555556666665532 


Q ss_pred             -CCccEEEEccccCCCCcccCc---ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          107 -LPLNILINNAGIMATPFMLSK---DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       107 -~~id~lv~nag~~~~~~~~~~---~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                       .++|.++|-||-+......+.   ...+.++...+.....-.+....+++.       .|-+-..+.-.+..+.|    
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------GGLL~LtGAkaAl~gTP----  138 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------GGLLQLTGAKAALGGTP----  138 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------CceeeecccccccCCCC----
Confidence             479999999997655332222   345667777777777777777777753       44555555555666555    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 ++..|+.+|+|++.++++|+.+-..-.+.-.+.+|-|-..+|||.+.+-...++.      .+.+.+.+
T Consensus       139 -----------gMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs------sWTPL~fi  201 (236)
T KOG4022|consen  139 -----------GMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS------SWTPLSFI  201 (236)
T ss_pred             -----------cccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc------CcccHHHH
Confidence                       4788999999999999999987544323377888999999999998772222222      23466788


Q ss_pred             HHHHHHHhcCCCccCCCccccc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ++..+.+.. +....-+|..+-
T Consensus       202 ~e~flkWtt-~~~RPssGsLlq  222 (236)
T KOG4022|consen  202 SEHFLKWTT-ETSRPSSGSLLQ  222 (236)
T ss_pred             HHHHHHHhc-cCCCCCCCceEE
Confidence            999998884 555666776543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.17  E-value=3.5e-09  Score=114.60  Aligned_cols=222  Identities=21%  Similarity=0.142  Sum_probs=135.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC----CEEEEEeCCHHHHH---HHHHHHHhhC-----CCCceEEEEcCCCCHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG----VHVVMAVRNMAACR---EVKKAIVKEI-----PNAKVQAMELDLSSLASV   95 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G----~~Vv~~~r~~~~~~---~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~v   95 (319)
                      ..++|+||||+|.||..++++|++++    .+|+.+.|+.....   ...+......     ...++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            45899999999999999999999987    68888888743322   2221111100     013789999999864200


Q ss_pred             --HHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           96 --RKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        96 --~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                        ...+.++.   ..+|++||||+.....     ..+......|+.|+..+++.+...         +..+++++||.+.
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~---------~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAEG---------KAKQFSFVSSTSA 1112 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHhC---------CCceEEEEeCeee
Confidence              11122222   2689999999975321     223445567999999998877432         2348999999876


Q ss_pred             ccCCCC-------------CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          174 QFSYPE-------------GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       174 ~~~~p~-------------~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                      +.....             .+..++............|+.||.+.+.++...+    ..|  +.+..+.||.+-.+....
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~----~~g--~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG----KRG--LRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH----hCC--CCEEEECCCccccCCCcC
Confidence            532110             0000000001111123569999999998886543    246  888899999997653222


Q ss_pred             c----hhHHHHHHHH------h----hhhcCCHHHHHHHHHHHhcC
Q 020927          241 I----SFFSGLVGLL------G----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       241 ~----~~~~~~~~~~------~----~~~~~~~~~va~~i~~l~~s  272 (319)
                      .    .+...+....      +    ..-+.++++++++++.++..
T Consensus      1187 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~ 1232 (1389)
T TIGR03443      1187 ATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALN 1232 (1389)
T ss_pred             CCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhC
Confidence            1    2222222111      1    12245789999999999853

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.17  E-value=2.5e-10  Score=98.85  Aligned_cols=184  Identities=17%  Similarity=0.148  Sum_probs=135.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK--EIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++|++||||-||--|.-+|+.|+++|+.|+.+.|..+......-.+..  ...+.+++++.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            479999999999999999999999999999998764332211001111  111456899999999999999999988   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        .+|-+.|-++..+..  .+.+.-..+.+++..|+++|+.++.-.-.       ++.|+..-||.--+.-    ..--.
T Consensus        78 --~PdEIYNLaAQS~V~--vSFe~P~~T~~~~~iGtlrlLEaiR~~~~-------~~~rfYQAStSE~fG~----v~~~p  142 (345)
T COG1089          78 --QPDEIYNLAAQSHVG--VSFEQPEYTADVDAIGTLRLLEAIRILGE-------KKTRFYQASTSELYGL----VQEIP  142 (345)
T ss_pred             --Cchhheecccccccc--ccccCcceeeeechhHHHHHHHHHHHhCC-------cccEEEecccHHhhcC----cccCc
Confidence              889999998865433  45567778899999999999988765432       2446666666443321    11223


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcc---CCCcEEEEEeeCC
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKE---DGVDITANSVHPG  231 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~---~g~~i~v~~v~PG  231 (319)
                      ..+.+++.+.+.|+++|.....++......|.-   .|  |-+|+=+|.
T Consensus       143 q~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnG--ILFNHESP~  189 (345)
T COG1089         143 QKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNG--ILFNHESPL  189 (345)
T ss_pred             cccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecc--eeecCCCCC
Confidence            567778888999999999999888888777654   35  777765654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.15  E-value=1.3e-09  Score=96.87  Aligned_cols=183  Identities=18%  Similarity=0.160  Sum_probs=139.4

Q ss_pred             CCEEEEeCC-CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGA-SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGa-s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ..+|||.|. +..|++.+|..|-++|+-|+++..+.+..+...    .+. ...+..+..|..++.++...+.++.+...
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve----~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVE----SED-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHH----hcc-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            467899995 799999999999999999999999976544433    222 44588888999888888888777766443


Q ss_pred             C--------------ccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC-
Q 020927          108 P--------------LNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS-  169 (319)
Q Consensus       108 ~--------------id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is-  169 (319)
                      .              +..+|.......+   ....+.+.|.+.++.|+..++..++.++|+++...   ..+.+||+++ 
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~---~~~~~iil~~P  154 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS---NQKSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCceEEEEeC
Confidence            2              3445554443332   33567789999999999999999999999998732   1255666655 


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      |+.+....|.               .+.-.....++.+|...|++|+.+.+  |.|..++.|.++-.
T Consensus       155 si~ssl~~Pf---------------hspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSLNPPF---------------HSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhccCCCc---------------cCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            6655554342               45567788999999999999999988  99999999988765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.15  E-value=1.3e-09  Score=106.61  Aligned_cols=129  Identities=13%  Similarity=0.138  Sum_probs=91.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHHHH---------HhhCC-------CCceEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMA---ACREVKKAI---------VKEIP-------NAKVQA   84 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~~~~-------~~~v~~   84 (319)
                      ++||+||||||||.||..++++|++.+.   +|+++.|..+   ..+...+++         ++..+       ..+++.
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4899999999999999999999998753   6888888432   222222222         22222       247899


Q ss_pred             EEcCCCCH------HHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc
Q 020927           85 MELDLSSL------ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE  158 (319)
Q Consensus        85 ~~~Dl~~~------~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~  158 (319)
                      +..|++++      +..+.+.+       .+|++||+|+....     .+..+..+++|+.++.++++.+...-      
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~------  258 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK------  258 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC------
Confidence            99999987      23333332       68999999997532     14577889999999999998876531      


Q ss_pred             CCCCCeEEEeCCccccc
Q 020927          159 SSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       159 ~~~~~~ii~isS~~~~~  175 (319)
                        ...++|++||...+.
T Consensus       259 --~lk~fV~vSTayVyG  273 (605)
T PLN02503        259 --KLKLFLQVSTAYVNG  273 (605)
T ss_pred             --CCCeEEEccCceeec
Confidence              134789998876554

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.11  E-value=3.2e-09  Score=92.04  Aligned_cols=245  Identities=14%  Similarity=0.050  Sum_probs=158.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeC---CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG--VHVVMAVR---NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r---~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.++||||+|.||...+..++..=  .+.+..+-   ...  ...++++..   ..+..++..|+.+...+..++..  
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n---~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRN---SPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhcc---CCCceEeeccccchHHHHhhhcc--
Confidence            3899999999999999999999873  34444321   111  111222211   45789999999999888777663  


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                         .++|.|+|-|...+..  .+.-+--...+.|++++..|++...-...        -.++|.||+..-++..    +.
T Consensus        79 ---~~id~vihfaa~t~vd--~s~~~~~~~~~nnil~t~~Lle~~~~sg~--------i~~fvhvSTdeVYGds----~~  141 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVD--RSFGDSFEFTKNNILSTHVLLEAVRVSGN--------IRRFVHVSTDEVYGDS----DE  141 (331)
T ss_pred             ---CchhhhhhhHhhhhhh--hhcCchHHHhcCCchhhhhHHHHHHhccC--------eeEEEEecccceecCc----cc
Confidence               3899999999864432  11122345678899999999999887653        3489999997766521    11


Q ss_pred             cCCC-CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH------------
Q 020927          184 DRIN-DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL------------  250 (319)
Q Consensus       184 ~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~------------  250 (319)
                      +... +.+-..+...|+++|+|.+++.+++.+.|+     +.+..+.-+.|-.|-.-.......++..            
T Consensus       142 ~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~  216 (331)
T KOG0747|consen  142 DAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGD  216 (331)
T ss_pred             cccccccccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecC
Confidence            1111 344455677899999999999999999875     6666677777766643333222222221            


Q ss_pred             -HhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccccChhccCHHHHHHHHHHHHHHHHH
Q 020927          251 -LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLIYR  314 (319)
Q Consensus       251 -~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (319)
                       .......-++|+++++-..+. .   +..|+++.-+        ..++.....+.++..+++.+
T Consensus       217 g~~~rs~l~veD~~ea~~~v~~-K---g~~geIYNIg--------td~e~~~~~l~k~i~eli~~  269 (331)
T KOG0747|consen  217 GLQTRSYLYVEDVSEAFKAVLE-K---GELGEIYNIG--------TDDEMRVIDLAKDICELFEK  269 (331)
T ss_pred             cccceeeEeHHHHHHHHHHHHh-c---CCccceeecc--------CcchhhHHHHHHHHHHHHHH
Confidence             122334578999999998884 2   2246654422        23344455566666655554

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.10  E-value=3.5e-09  Score=106.32  Aligned_cols=155  Identities=15%  Similarity=0.093  Sum_probs=101.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ..++||||||+|.||+++++.|.++|++|...                          ..|+++.+.+..++.+.     
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----
Confidence            44679999999999999999999999887311                          13678888887777654     


Q ss_pred             CccEEEEccccCCCC-cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC---CCCCcC
Q 020927          108 PLNILINNAGIMATP-FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY---PEGIRF  183 (319)
Q Consensus       108 ~id~lv~nag~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~---p~~~~~  183 (319)
                      ++|+|||+|+..... .+...+.-...+++|+.++.++++++...          +.++|++||...+...   |... -
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~-~  496 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGS-G  496 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCccccccc-C
Confidence            799999999975432 22223455788999999999999998753          2256666664432210   1000 0


Q ss_pred             cCCCCC-CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 020927          184 DRINDQ-SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVH  229 (319)
Q Consensus       184 ~~~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~  229 (319)
                      ..+.++ ........|+.||.+.+.+++.+..   ...  +++..+.
T Consensus       497 ~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~--~r~~~~~  538 (668)
T PLN02260        497 IGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCT--LRVRMPI  538 (668)
T ss_pred             CCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heE--EEEEEec
Confidence            011121 1122236899999999998876532   123  5665554

>PLN00016 RNA-binding protein; Provisional

Probab=99.05  E-value=1.5e-08  Score=94.89  Aligned_cols=194  Identities=16%  Similarity=0.085  Sum_probs=115.0

Q ss_pred             cCCCCCCCEEEEe----CCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------HHHHhhCCCCceEEEEcCCCC
Q 020927           23 QGIDGSGLTAIVT----GASSGIGTETARVLALRGVHVVMAVRNMAACREVK-------KAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        23 ~~~~l~~k~vlIt----Gas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      .......++||||    ||+|.||..++++|+++|++|++++|+........       ..+.    ...+.++.+|+.+
T Consensus        46 ~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d  121 (378)
T PLN00016         46 AAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD  121 (378)
T ss_pred             hhcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH
Confidence            3344566889999    99999999999999999999999999865432211       1111    2247888899876


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                         +.+++.     ...+|++||+++..                  ..+.    +.++..+++.     .-.++|++||.
T Consensus       122 ---~~~~~~-----~~~~d~Vi~~~~~~------------------~~~~----~~ll~aa~~~-----gvkr~V~~SS~  166 (378)
T PLN00016        122 ---VKSKVA-----GAGFDVVYDNNGKD------------------LDEV----EPVADWAKSP-----GLKQFLFCSSA  166 (378)
T ss_pred             ---HHhhhc-----cCCccEEEeCCCCC------------------HHHH----HHHHHHHHHc-----CCCEEEEEccH
Confidence               333332     13789999987620                  1122    2333333332     24589999998


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--h-hHHHHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--S-FFSGLV  248 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~-~~~~~~  248 (319)
                      ..+.......    ..+....   ..+. +|...+.+.+       ..+  +.+..+.|+.+-.+.....  . +...+.
T Consensus       167 ~vyg~~~~~p----~~E~~~~---~p~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~~~~~~~~~~~~~~  229 (378)
T PLN00016        167 GVYKKSDEPP----HVEGDAV---KPKA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGNNKDCEEWFFDRLV  229 (378)
T ss_pred             hhcCCCCCCC----CCCCCcC---CCcc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCCCCchHHHHHHHHH
Confidence            7654321100    1111111   1122 7888776543       235  7788899998887643221  1 111111


Q ss_pred             HH--H--h-----hhhcCCHHHHHHHHHHHhcC
Q 020927          249 GL--L--G-----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       249 ~~--~--~-----~~~~~~~~~va~~i~~l~~s  272 (319)
                      ..  +  +     ...+..++|+|++++.++..
T Consensus       230 ~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        230 RGRPVPIPGSGIQLTQLGHVKDLASMFALVVGN  262 (378)
T ss_pred             cCCceeecCCCCeeeceecHHHHHHHHHHHhcC
Confidence            10  0  0     01134689999999999854

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.02  E-value=3.8e-09  Score=94.90  Aligned_cols=176  Identities=14%  Similarity=0.098  Sum_probs=108.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC-c
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP-L  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~-i  109 (319)
                      +||||||||.||+.++++|+++|++|.+++|++++..           ...+..+.+|+.|++++.++++.. +.... +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            4899999999999999999999999999999976432           124566789999999999888653 22335 8


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |.++++++...       +.            ....+.+++.+++.     .-.+||++||......             
T Consensus        69 d~v~~~~~~~~-------~~------------~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~~-------------  111 (285)
T TIGR03649        69 SAVYLVAPPIP-------DL------------APPMIKFIDFARSK-----GVRRFVLLSASIIEKG-------------  111 (285)
T ss_pred             eEEEEeCCCCC-------Ch------------hHHHHHHHHHHHHc-----CCCEEEEeeccccCCC-------------
Confidence            99999887321       00            01123344444443     2458999998543321             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHH--HHHHH--HhhhhcCCHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFS--GLVGL--LGKYVIKNVEQG  262 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~--~~~~~--~~~~~~~~~~~v  262 (319)
                               ...+...+.+.+.      ..|  +....+.|+++..++....   ....  .+...  -....+.+++|+
T Consensus       112 ---------~~~~~~~~~~l~~------~~g--i~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dv  174 (285)
T TIGR03649       112 ---------GPAMGQVHAHLDS------LGG--VEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDI  174 (285)
T ss_pred             ---------CchHHHHHHHHHh------ccC--CCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHH
Confidence                     0122222222211      136  7777899997765542211   0000  00000  112335689999


Q ss_pred             HHHHHHHhcC
Q 020927          263 AATTCYVALH  272 (319)
Q Consensus       263 a~~i~~l~~s  272 (319)
                      |+.+..++..
T Consensus       175 a~~~~~~l~~  184 (285)
T TIGR03649       175 ARVAYRALTD  184 (285)
T ss_pred             HHHHHHHhcC
Confidence            9999999853

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.01  E-value=6.3e-10  Score=96.48  Aligned_cols=100  Identities=13%  Similarity=0.200  Sum_probs=72.7

Q ss_pred             CEEEEeCC-CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGA-SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGa-s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+=.||.. +||||+++|++|+++|++|+++++... +       . .  .   ....+|+++.+++.++++++.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~-~--~---~~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------K-P--E---PHPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------c-c--c---cCCcceeecHHHHHHHHHHHHHHcCC
Confidence            44556665 579999999999999999999986311 1       0 0  0   02458999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHH
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTN  146 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~  146 (319)
                      +|+||||||+...  ..+.+.++|++++.   .+.+.+.+
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9999999997543  33456677776643   34444443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=6.6e-09  Score=99.50  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=108.4

Q ss_pred             EeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEEE
Q 020927           34 VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILI  113 (319)
Q Consensus        34 ItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv  113 (319)
                      |+||++|+|.+++..|...|+.|+.+.+......        .....++..+.+|.+..+....                
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~----------------   98 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITDPAD----------------   98 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCCHHH----------------
Confidence            7788899999999999999999998876543100        0001122223333333222221                


Q ss_pred             EccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCC
Q 020927          114 NNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN  193 (319)
Q Consensus       114 ~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~  193 (319)
                                              +.+.+.+++..++.|..       .|+||+++|......                 
T Consensus        99 ------------------------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~~~-----------------  130 (450)
T PRK08261         99 ------------------------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEAAA-----------------  130 (450)
T ss_pred             ------------------------HHHHHHHHHHHHHhccC-------CCEEEEEccccccCC-----------------
Confidence                                    22344567777777743       679999999766431                 


Q ss_pred             ccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCC
Q 020927          194 RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       194 ~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~  273 (319)
                       ...|+++|+++.+++++++.|+ +.+  ++++.|.|+.                        ..++++++.+.|++ ++
T Consensus       131 -~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~------------------------~~~~~~~~~~~~l~-s~  181 (450)
T PRK08261        131 -DPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP------------------------GAEAGLESTLRFFL-SP  181 (450)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC------------------------CCHHHHHHHHHHhc-CC
Confidence             3469999999999999999999 778  9999999885                        25788888998988 68


Q ss_pred             CccCCCcccccCCc
Q 020927          274 HVKGLTGSYFADSN  287 (319)
Q Consensus       274 ~~~~~~G~~~~~~g  287 (319)
                      ...+++|+.+...+
T Consensus       182 ~~a~~~g~~i~~~~  195 (450)
T PRK08261        182 RSAYVSGQVVRVGA  195 (450)
T ss_pred             ccCCccCcEEEecC
Confidence            88889998777433

>PRK12320 hypothetical protein; Provisional

Probab=98.92  E-value=6.7e-08  Score=95.84  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=77.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||||+|.||+.++++|.++|++|++++|.....         .  ...+.++.+|+++.. +.+++.       ++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            699999999999999999999999999999875321         0  235788999999973 433332       689


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++||+|+....          ....+|+.+..++++++...          +.++|++||..
T Consensus        63 ~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA~~~----------GvRiV~~SS~~  104 (699)
T PRK12320         63 AVIHLAPVDTS----------APGGVGITGLAHVANAAARA----------GARLLFVSQAA  104 (699)
T ss_pred             EEEEcCccCcc----------chhhHHHHHHHHHHHHHHHc----------CCeEEEEECCC
Confidence            99999986311          11257888888888877431          33899998764

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.91  E-value=1.3e-08  Score=88.33  Aligned_cols=199  Identities=13%  Similarity=0.118  Sum_probs=112.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      |+||||||-||++++.+|.+.|.+|++++|++.+.+...            ...   +...+.+    ++...  ..+|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~------------~~~---v~~~~~~----~~~~~--~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL------------HPN---VTLWEGL----ADALT--LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc------------Ccc---ccccchh----hhccc--CCCCE
Confidence            689999999999999999999999999999987654311            111   0111111    11111  17999


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      +||-||........+.+.-+..    ..|.+..++.+.+...+.    .+++++..-+|..++++.....-+   ++.. 
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i----~~SRi~~T~~L~e~I~~~----~~~P~~~isaSAvGyYG~~~~~~~---tE~~-  127 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEI----RQSRINTTEKLVELIAAS----ETKPKVLISASAVGYYGHSGDRVV---TEES-  127 (297)
T ss_pred             EEECCCCccccccCCHHHHHHH----HHHHhHHHHHHHHHHHhc----cCCCcEEEecceEEEecCCCceee---ecCC-
Confidence            9999995322111222222222    446677778887777643    246667666777777653321111   1111 


Q ss_pred             CCccccchhhHHHHHHHHHHHH---HHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH-----Hhh----hhcCCH
Q 020927          192 YNRFSAYGQSKLANVLHTSELA---RRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL-----LGK----YVIKNV  259 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la---~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~~~----~~~~~~  259 (319)
                        +..     .-.+..+++.+-   ......|  +||..+.-|.|-.+-.--...+....+.     +..    ..+...
T Consensus       128 --~~g-----~~Fla~lc~~WE~~a~~a~~~g--tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhi  198 (297)
T COG1090         128 --PPG-----DDFLAQLCQDWEEEALQAQQLG--TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHI  198 (297)
T ss_pred             --CCC-----CChHHHHHHHHHHHHhhhhhcC--ceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeH
Confidence              111     112223333332   2233346  9999999999976432222211111111     111    123478


Q ss_pred             HHHHHHHHHHhcC
Q 020927          260 EQGAATTCYVALH  272 (319)
Q Consensus       260 ~~va~~i~~l~~s  272 (319)
                      ||..+.|.|++.+
T Consensus       199 eD~v~~I~fll~~  211 (297)
T COG1090         199 EDLVNAILFLLEN  211 (297)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999954

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.90  E-value=1.8e-07  Score=88.92  Aligned_cols=229  Identities=16%  Similarity=0.108  Sum_probs=143.6

Q ss_pred             ccCCCCCCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhC--CCCceEEEEcCCCCHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEI--PNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      .......++++|||||+ +.||-+++.+|++-|++||++..+-+ ...++.+.+...+  ++..+..+.+++.+..+|++
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45677899999999999 78999999999999999999875443 3445666665543  35678889999999999999


Q ss_pred             HHHHHHhcC----C----------CccEEEEccccCCCCcccCcccc--cchhhhhhhHHHHHHHHHHHHHhcccccCCC
Q 020927           98 FASEFKSSG----L----------PLNILINNAGIMATPFMLSKDNI--ELQFATNHIGHFLLTNLLLETMGKTARESSK  161 (319)
Q Consensus        98 ~~~~i~~~~----~----------~id~lv~nag~~~~~~~~~~~~~--~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~  161 (319)
                      +++.|-.+-    |          .++.+|--|.+.... +.+..+-  +-.+.+-+.+...++-.+.++-.....  ..
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G-~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v--~~  545 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG-ELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGV--DT  545 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccC-ccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCc--cc
Confidence            999995421    1          257777666653332 2221111  122333333444444333332211110  11


Q ss_pred             CCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccc-CCcc
Q 020927          162 EGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARR--LKEDGVDITANSVHPGAIT-TNLF  238 (319)
Q Consensus       162 ~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~g~~i~v~~v~PG~v~-t~~~  238 (319)
                      .-.||.-+|...-.                +.+...|+-+|++++.+..-+..|  ++.+   +.+..-.-|+++ |.++
T Consensus       546 R~hVVLPgSPNrG~----------------FGgDGaYgEsK~aldav~~RW~sEs~Wa~~---vsl~~A~IGWtrGTGLM  606 (866)
T COG4982         546 RLHVVLPGSPNRGM----------------FGGDGAYGESKLALDAVVNRWHSESSWAAR---VSLAHALIGWTRGTGLM  606 (866)
T ss_pred             ceEEEecCCCCCCc----------------cCCCcchhhHHHHHHHHHHHhhccchhhHH---HHHhhhheeeecccccc
Confidence            24567666655322                335678999999999876555444  3332   666666778887 5555


Q ss_pred             cCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCC
Q 020927          239 RNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~  274 (319)
                      ...+..-..++...- +.-+++|+|..++-|+ +++
T Consensus       607 g~Ndiiv~aiEk~GV-~tyS~~EmA~~LLgL~-sae  640 (866)
T COG4982         607 GHNDIIVAAIEKAGV-RTYSTDEMAFNLLGLA-SAE  640 (866)
T ss_pred             CCcchhHHHHHHhCc-eecCHHHHHHHHHhhc-cHH
Confidence            544433333333222 2348899999999998 344

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.80  E-value=3.8e-07  Score=79.34  Aligned_cols=164  Identities=15%  Similarity=0.110  Sum_probs=104.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+.+++|+||||+|.||..|+..|..+|..|++++--...-..   .+.......++..+.-|+..+     ++.    
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~---n~~~~~~~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKE---NLEHWIGHPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchh---hcchhccCcceeEEEeechhH-----HHH----
Confidence            44678999999999999999999999999999999853322111   111111133455555565544     444    


Q ss_pred             cCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          105 SGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                         .+|.++|-|....+ .+..   .-.+++..|+++..+++..+...          +.|++..|+..-+. .|...-.
T Consensus        91 ---evD~IyhLAapasp~~y~~---npvktIktN~igtln~lglakrv----------~aR~l~aSTseVYg-dp~~hpq  153 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYKY---NPVKTIKTNVIGTLNMLGLAKRV----------GARFLLASTSEVYG-DPLVHPQ  153 (350)
T ss_pred             ---HhhhhhhhccCCCCccccc---CccceeeecchhhHHHHHHHHHh----------CceEEEeecccccC-CcccCCC
Confidence               56889999988766 3322   23567888999999998877654          34777777655443 2221100


Q ss_pred             cCCC--CCCCCCccccchhhHHHHHHHHHHHHHHhc
Q 020927          184 DRIN--DQSGYNRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       184 ~~~~--~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                      -+..  ....-.+.+.|...|.+.+.|+....++.+
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~g  189 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEG  189 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhcccC
Confidence            0000  111122356799999999988877666543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=6e-08  Score=87.33  Aligned_cols=85  Identities=20%  Similarity=0.242  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCH---HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNM---AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      .++++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+.+....  ..+....+|+.+.+++.+.++
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc
Confidence            4578999999999 69999999999999985 99999986   66677666664442  345566788888777665544


Q ss_pred             HHHhcCCCccEEEEccccC
Q 020927          101 EFKSSGLPLNILINNAGIM  119 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~  119 (319)
                             ..|+||||..+.
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   569999999753

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.72  E-value=4.7e-08  Score=91.41  Aligned_cols=80  Identities=21%  Similarity=0.230  Sum_probs=62.3

Q ss_pred             CCCCCEEEEeCC---------------C-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           26 DGSGLTAIVTGA---------------S-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        26 ~l~~k~vlItGa---------------s-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      +++||++|||||               + |++|+++|++|+++|++|++++++.+ .+         . ...  ...+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~~--~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PAG--VKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CCC--cEEEcc
Confidence            479999999999               4 55999999999999999999998752 11         0 111  346799


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMAT  121 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~  121 (319)
                      ++.+++.+.+.   +.++++|++|||||+...
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            99888766665   457789999999998543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.66  E-value=6.4e-07  Score=78.00  Aligned_cols=195  Identities=17%  Similarity=0.125  Sum_probs=114.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+.++  ...+.+...    .++.+.+|+.+++++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCce
Confidence            7999999999999999999999999999998743  222333322    35677999999999988887       8899


Q ss_pred             EEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCC
Q 020927          112 LINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSG  191 (319)
Q Consensus       112 lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~  191 (319)
                      +|++.+...+              .-......+++++...-         -.++| .||.........           +
T Consensus        68 v~~~~~~~~~--------------~~~~~~~~li~Aa~~ag---------Vk~~v-~ss~~~~~~~~~-----------~  112 (233)
T PF05368_consen   68 VFSVTPPSHP--------------SELEQQKNLIDAAKAAG---------VKHFV-PSSFGADYDESS-----------G  112 (233)
T ss_dssp             EEEESSCSCC--------------CHHHHHHHHHHHHHHHT----------SEEE-ESEESSGTTTTT-----------T
T ss_pred             EEeecCcchh--------------hhhhhhhhHHHhhhccc---------cceEE-EEEecccccccc-----------c
Confidence            9999986431              11223334555555432         22666 455443321110           0


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH---------HH-HhhhhcC-CHH
Q 020927          192 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV---------GL-LGKYVIK-NVE  260 (319)
Q Consensus       192 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~---------~~-~~~~~~~-~~~  260 (319)
                      ..+...+-..|..++.+.+..       +  +....|.||+................         .. -...... +.+
T Consensus       113 ~~p~~~~~~~k~~ie~~l~~~-------~--i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (233)
T PF05368_consen  113 SEPEIPHFDQKAEIEEYLRES-------G--IPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTR  183 (233)
T ss_dssp             STTHHHHHHHHHHHHHHHHHC-------T--SEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHH
T ss_pred             ccccchhhhhhhhhhhhhhhc-------c--ccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHH
Confidence            111122334666666544332       5  77778899987655433221100000         00 0112233 789


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      |+|+.+..++..| .....|.++.
T Consensus       184 Dvg~~va~il~~p-~~~~~~~~~~  206 (233)
T PF05368_consen  184 DVGRAVAAILLDP-EKHNNGKTIF  206 (233)
T ss_dssp             HHHHHHHHHHHSG-GGTTEEEEEE
T ss_pred             HHHHHHHHHHcCh-HHhcCCEEEE
Confidence            9999999999643 2332455544

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.65  E-value=3e-07  Score=77.95  Aligned_cols=85  Identities=20%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..++++++++|.||+|++|+++++.|++.|.+|++++|+.++++...+.+....   ......+|+.+.+++.+.+.   
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~---   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK---   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh---
Confidence            357899999999999999999999999999999999999988888777765432   23355678888888777665   


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                          ..|++|++...
T Consensus        97 ----~~diVi~at~~  107 (194)
T cd01078          97 ----GADVVFAAGAA  107 (194)
T ss_pred             ----cCCEEEECCCC
Confidence                57888887764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.58  E-value=2.2e-06  Score=72.26  Aligned_cols=161  Identities=17%  Similarity=0.117  Sum_probs=100.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|||||++|=+|.||.+.+.++|.   +.++.+..                       .+|+++..+.+++++..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc----
Confidence            6899999999999999999999986   34444433                       26999999999999876    


Q ss_pred             CCccEEEEccccCCCCc---ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-CCCCc
Q 020927          107 LPLNILINNAGIMATPF---MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-PEGIR  182 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~---~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-p~~~~  182 (319)
                       ++.++||.|+..+...   ..+.+    .+.+|+.=.-++++.+.++..+         ++++..|.+-+.-. |..+|
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynld----F~r~Nl~indNVlhsa~e~gv~---------K~vsclStCIfPdkt~yPId  120 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLD----FIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCIFPDKTSYPID  120 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchH----HHhhcceechhHHHHHHHhchh---------hhhhhcceeecCCCCCCCCC
Confidence             7889999998655422   22223    3344444444566666665432         66666665533210 11111


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      ...+-.--..+..-.|+.+|..+.-..+.++.+++..     ..++.|-.+-.|
T Consensus       121 Etmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~-----~tsviPtNvfGp  169 (315)
T KOG1431|consen  121 ETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD-----YTSVIPTNVFGP  169 (315)
T ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCc-----eeeeccccccCC
Confidence            1111111112224468999998887778888776643     334555544443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.58  E-value=1.5e-06  Score=75.74  Aligned_cols=211  Identities=19%  Similarity=0.088  Sum_probs=134.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -+.+|-++-|-||||.+|+-++.+|++.|-+|++-.|-.+.--   ..++....-+++.+...|+.|+++|+++++    
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHH----
Confidence            3468889999999999999999999999999999998653322   222222223579999999999999999988    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         .-+++||-.|.-.+-..      -...++|+.+.-.+++.+-+...+         ++|.+|+..+....       
T Consensus       130 ---~sNVVINLIGrd~eTkn------f~f~Dvn~~~aerlAricke~GVe---------rfIhvS~Lganv~s-------  184 (391)
T KOG2865|consen  130 ---HSNVVINLIGRDYETKN------FSFEDVNVHIAERLARICKEAGVE---------RFIHVSCLGANVKS-------  184 (391)
T ss_pred             ---hCcEEEEeeccccccCC------cccccccchHHHHHHHHHHhhChh---------heeehhhccccccC-------
Confidence               56899999995322111      234567888888888877665433         89999997755432       


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH---Hhhhhc-----
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL---LGKYVI-----  256 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~~~~~-----  256 (319)
                                -+-|--+|++-+-.++    +--++.     ..+.|.-+-..--+-++....+.+.   ++....     
T Consensus       185 ----------~Sr~LrsK~~gE~aVr----dafPeA-----tIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~  245 (391)
T KOG2865|consen  185 ----------PSRMLRSKAAGEEAVR----DAFPEA-----TIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTV  245 (391)
T ss_pred             ----------hHHHHHhhhhhHHHHH----hhCCcc-----eeechhhhcccchhHHHHHHHHHHhcCceeeecCCccee
Confidence                      2346667777665442    222332     2356765544322222222222221   111110     


Q ss_pred             ---CCHHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          257 ---KNVEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       257 ---~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                         .-+-|||++|+..+..|.+.   |..+.-.|+.
T Consensus       246 K~PVyV~DVaa~IvnAvkDp~s~---Gktye~vGP~  278 (391)
T KOG2865|consen  246 KQPVYVVDVAAAIVNAVKDPDSM---GKTYEFVGPD  278 (391)
T ss_pred             eccEEEehHHHHHHHhccCcccc---CceeeecCCc
Confidence               13468999999999766444   5544444433

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.47  E-value=4.8e-07  Score=84.38  Aligned_cols=108  Identities=17%  Similarity=0.226  Sum_probs=73.0

Q ss_pred             CCCCCEEEEeCC---------------CCc-hhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           26 DGSGLTAIVTGA---------------SSG-IGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        26 ~l~~k~vlItGa---------------s~g-IG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      +++||++|||||               |+| +|.++|++|+.+|++|+++++.....          . ...  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEe
Confidence            488999999999               667 99999999999999999988764311          1 222  245799


Q ss_pred             CCHHHH-HHHHHHHHhcCCCccEEEEccccCCC-CcccCccccc---chhhhhhhHHHHHHHHHH
Q 020927           90 SSLASV-RKFASEFKSSGLPLNILINNAGIMAT-PFMLSKDNIE---LQFATNHIGHFLLTNLLL  149 (319)
Q Consensus        90 ~~~~~v-~~~~~~i~~~~~~id~lv~nag~~~~-~~~~~~~~~~---~~~~vn~~~~~~l~~~~~  149 (319)
                      ++.+++ +++++++   ++++|++|+|||+... +.+.....+.   ..+.+|+...--+++.+.
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            998888 5555443   4679999999998644 2121111122   234556555555555544

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.45  E-value=4.1e-06  Score=78.90  Aligned_cols=186  Identities=20%  Similarity=0.258  Sum_probs=120.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--C-EEEEEeCCH---HHHH--------HHHHHHHhhCCC--CceEEEEcCCC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRG--V-HVVMAVRNM---AACR--------EVKKAIVKEIPN--AKVQAMELDLS   90 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G--~-~Vv~~~r~~---~~~~--------~~~~~~~~~~~~--~~v~~~~~Dl~   90 (319)
                      ++||+++||||||++|+-++..|++.-  . +|+++-|..   +.-+        .+.+.+++..|.  .++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            589999999999999999999999874  2 677776632   1111        222333333333  57888899988


Q ss_pred             CHH------HHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCe
Q 020927           91 SLA------SVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGR  164 (319)
Q Consensus        91 ~~~------~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~  164 (319)
                      +++      +.+.+.+       .+|++||+|+...-     .|.++....+|.+|+.++++.+.....-        ..
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l--------~~  149 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKL--------KA  149 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhh--------he
Confidence            753      3332333       78999999996422     2567788999999999999999887643        37


Q ss_pred             EEEeCCccccc--------CCCCCC--cCcC------------C-----CCCCCCCccccchhhHHHHHHHHHHHHHHhc
Q 020927          165 IVNVSSRRHQF--------SYPEGI--RFDR------------I-----NDQSGYNRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       165 ii~isS~~~~~--------~~p~~~--~~~~------------~-----~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                      .+.+|...+..        ++|...  +.+.            +     ....++  ...|.-+|+..+.+...    .+
T Consensus       150 ~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~--PNTYtfTKal~E~~i~~----~~  223 (467)
T KOG1221|consen  150 LVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGW--PNTYTFTKALAEMVIQK----EA  223 (467)
T ss_pred             EEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCC--CCceeehHhhHHHHHHh----hc
Confidence            78888766552        111111  1110            0     111111  34688899988876643    22


Q ss_pred             cCCCcEEEEEeeCCcccCCcccCc
Q 020927          218 EDGVDITANSVHPGAITTNLFRNI  241 (319)
Q Consensus       218 ~~g~~i~v~~v~PG~v~t~~~~~~  241 (319)
                       ++  +-+..+.|..|-+....+.
T Consensus       224 -~~--lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  224 -EN--LPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             -cC--CCeEEEcCCceeccccCCC
Confidence             22  6677789988877654443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.43  E-value=3e-06  Score=72.35  Aligned_cols=184  Identities=16%  Similarity=0.148  Sum_probs=120.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHh---hCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK-KAIVK---EIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~-~~~~~---~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .|++||||-+|-=|.-++.-|+.+|+.|+..-|..+.+.... +.+-.   ...+........|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            469999999999999999999999999999987555443221 11111   111456788899999999999999988  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         +++-+.|.|+..+...  +-+--+-+-+|...|++.|+.++..+-...      +-|+--.| .+...+   ....-
T Consensus       106 ---kPtEiYnLaAQSHVkv--SFdlpeYTAeVdavGtLRlLdAi~~c~l~~------~VrfYQAs-tSElyG---kv~e~  170 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKV--SFDLPEYTAEVDAVGTLRLLDAIRACRLTE------KVRFYQAS-TSELYG---KVQEI  170 (376)
T ss_pred             ---CchhhhhhhhhcceEE--EeecccceeeccchhhhhHHHHHHhcCccc------ceeEEecc-cHhhcc---cccCC
Confidence               7788888887654432  223334455677889999998887765442      22333333 232221   11111


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCC
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLK---EDGVDITANSVHPG  231 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~g~~i~v~~v~PG  231 (319)
                      ...+.+++.+-+.|+++|.+-..++-.++..|.   -.|  |-+|.=+|.
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNG--ILFNHESPR  218 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNG--ILFNHESPR  218 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeecc--EeecCCCCc
Confidence            133556677778999999886655544444433   345  777766663

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.43  E-value=1.4e-05  Score=74.21  Aligned_cols=211  Identities=17%  Similarity=0.083  Sum_probs=122.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -..+-.+|+|+||+|++|+-+++.|.++|+.|.++-|+.++.+.... +...  .....-+..|...+.++.....+...
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~~  151 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAVP  151 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhcc
Confidence            44577899999999999999999999999999999999988776655 1111  22344455566555444333332211


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                        -...+++.++|......     +..--++|.+.|..++..++....         -.++|+++++.+...++.     
T Consensus       152 --~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aG---------vk~~vlv~si~~~~~~~~-----  210 (411)
T KOG1203|consen  152 --KGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAG---------VKRVVLVGSIGGTKFNQP-----  210 (411)
T ss_pred             --ccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhC---------CceEEEEEeecCcccCCC-----
Confidence              13456777776432221     344556677889999999885443         339999999887754322     


Q ss_pred             CCCCCCCCCccccc-----hhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhh--h
Q 020927          185 RINDQSGYNRFSAY-----GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKY--V  255 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y-----~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~--~  255 (319)
                               .+..+     ..+|..       ....++..|  +.-..|.||....+.....  .....-.......  .
T Consensus       211 ---------~~~~~~~~~~~~~k~~-------~e~~~~~Sg--l~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (411)
T KOG1203|consen  211 ---------PNILLLNGLVLKAKLK-------AEKFLQDSG--LPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAY  272 (411)
T ss_pred             ---------chhhhhhhhhhHHHHh-------HHHHHHhcC--CCcEEEeccccccCCCCcceecccCccccccccccce
Confidence                     11111     122222       233444566  6666688887765432211  1000000000111  1


Q ss_pred             cCCHHHHHHHHHHHhcCCCccC
Q 020927          256 IKNVEQGAATTCYVALHPHVKG  277 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~  277 (319)
                      ..+-.++|+.++.++..+...+
T Consensus       273 ~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  273 SISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             eeehhhHHHHHHHHHhhhhhcc
Confidence            3456677777777775544443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.41  E-value=9.6e-07  Score=89.11  Aligned_cols=169  Identities=18%  Similarity=0.117  Sum_probs=126.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhh-CCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..|+++|+||-||.|++++.+|..+|+ ++|+++|+.-+.-.-...++.. -.+..+..-..|++.....+.++++.. +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            468999999999999999999999999 6999999875544333333332 115667777788888888888888764 4


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      .+.+-.++|-|.+...  ..+.+++.+.+.-+..+.++.+|-+.-.+.-..       -..+|..||.++-..       
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~-------LdyFv~FSSvscGRG------- 1911 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE-------LDYFVVFSSVSCGRG------- 1911 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc-------cceEEEEEeecccCC-------
Confidence            5688899999988765  456788899999999999999887666554332       237788888776663       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDG  220 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g  220 (319)
                              ..++..|+.+..+++.++.- +++.+-.|
T Consensus      1912 --------N~GQtNYG~aNS~MERiceq-Rr~~GfPG 1939 (2376)
T KOG1202|consen 1912 --------NAGQTNYGLANSAMERICEQ-RRHEGFPG 1939 (2376)
T ss_pred             --------CCcccccchhhHHHHHHHHH-hhhcCCCc
Confidence                    44689999999999998854 33334444

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.36  E-value=1.2e-06  Score=76.09  Aligned_cols=97  Identities=15%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             EEEEeCCCCc-hhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSG-IGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~g-IG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +-.||+.++| ||+++|++|+++|++|++++|.....         ..+..++.++.++     +..++.+.+.+.++.+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            6678877765 99999999999999999998764210         0012245555542     2333333343444578


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHH
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGH  141 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~  141 (319)
                      |++|||||+...  ....+.+.+..++++|.+..
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            999999998652  22345677888887776554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.33  E-value=2.9e-06  Score=78.41  Aligned_cols=77  Identities=27%  Similarity=0.486  Sum_probs=67.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +.+||.|| |+||+.+|..|+++| .+|.+.+|+.+++.++....     ..++.++++|+.+.+.+.++++       .
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~-------~   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIK-------D   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHh-------c
Confidence            57899999 999999999999999 69999999998888776654     4489999999999999988888       3


Q ss_pred             ccEEEEccccC
Q 020927          109 LNILINNAGIM  119 (319)
Q Consensus       109 id~lv~nag~~  119 (319)
                      .|++|+++...
T Consensus        69 ~d~VIn~~p~~   79 (389)
T COG1748          69 FDLVINAAPPF   79 (389)
T ss_pred             CCEEEEeCCch
Confidence            49999999753

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.33  E-value=1.4e-05  Score=70.96  Aligned_cols=131  Identities=21%  Similarity=0.119  Sum_probs=93.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +.+|||||||.+|.+++++|.++|.+|++..|+.+.+....         ..+.+...|+.++.++...++       +.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cc
Confidence            36999999999999999999999999999999998776543         358888999999999988877       77


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      +.+++..+... ..     .  ........+.....+...    .      ....++.+|...+...             
T Consensus        65 ~~~~~i~~~~~-~~-----~--~~~~~~~~~~~~~a~~a~----~------~~~~~~~~s~~~~~~~-------------  113 (275)
T COG0702          65 DGVLLISGLLD-GS-----D--AFRAVQVTAVVRAAEAAG----A------GVKHGVSLSVLGADAA-------------  113 (275)
T ss_pred             cEEEEEecccc-cc-----c--chhHHHHHHHHHHHHHhc----C------CceEEEEeccCCCCCC-------------
Confidence            88888888643 11     1  122233344444444433    1      1336777776554432             


Q ss_pred             CCCCccccchhhHHHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSE  211 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~  211 (319)
                          ....|..+|...+...+.
T Consensus       114 ----~~~~~~~~~~~~e~~l~~  131 (275)
T COG0702         114 ----SPSALARAKAAVEAALRS  131 (275)
T ss_pred             ----CccHHHHHHHHHHHHHHh
Confidence                235788899998876644

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.29  E-value=4.2e-06  Score=70.99  Aligned_cols=174  Identities=16%  Similarity=0.171  Sum_probs=114.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALR-GV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.+...+||||+-|-+|.++|+-|-.+ |. .|++-+.-..... ..+       .  --++..|+-|.+.+++++-.  
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~~-------~--GPyIy~DILD~K~L~eIVVn--  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VTD-------V--GPYIYLDILDQKSLEEIVVN--  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hcc-------c--CCchhhhhhccccHHHhhcc--
Confidence            456788999999999999999988765 65 4666554322211 110       1  22455788888887776543  


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                         .+||.|||-.+....   ..........+||+.|..++++....+          +-++.+-|.+++..+...+..-
T Consensus       109 ---~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~----------kL~iFVPSTIGAFGPtSPRNPT  172 (366)
T KOG2774|consen  109 ---KRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKH----------KLKVFVPSTIGAFGPTSPRNPT  172 (366)
T ss_pred             ---cccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHc----------CeeEeecccccccCCCCCCCCC
Confidence               389999998876433   233556778899999999999888665          3366666777777653221100


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEe-eCCcccC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSV-HPGAITT  235 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v-~PG~v~t  235 (319)
                      -+   ..-..+-..|+.||.-.+.+.+.+...++-     .+.+. .||.+..
T Consensus       173 Pd---ltIQRPRTIYGVSKVHAEL~GEy~~hrFg~-----dfr~~rfPg~is~  217 (366)
T KOG2774|consen  173 PD---LTIQRPRTIYGVSKVHAELLGEYFNHRFGV-----DFRSMRFPGIISA  217 (366)
T ss_pred             CC---eeeecCceeechhHHHHHHHHHHHHhhcCc-----cceecccCccccc
Confidence            00   011224568999999999999988887754     23333 3776653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.24  E-value=2.1e-05  Score=63.97  Aligned_cols=191  Identities=16%  Similarity=0.087  Sum_probs=118.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-C-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-V-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.|+++.++|.||||-.|..+.+.+++.+ + +|+++.|.+.....+         +..+.....|+...++...-    
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~~----   80 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLATN----   80 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHhh----
Confidence            66899999999999999999999999998 3 799998875322221         45677778888876554333    


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                         +.++|+++|+-|.-..     ..+.+..+.+..--.+.+++..-+.         ....++.+||..+..+      
T Consensus        81 ---~qg~dV~FcaLgTTRg-----kaGadgfykvDhDyvl~~A~~AKe~---------Gck~fvLvSS~GAd~s------  137 (238)
T KOG4039|consen   81 ---EQGPDVLFCALGTTRG-----KAGADGFYKVDHDYVLQLAQAAKEK---------GCKTFVLVSSAGADPS------  137 (238)
T ss_pred             ---hcCCceEEEeeccccc-----ccccCceEeechHHHHHHHHHHHhC---------CCeEEEEEeccCCCcc------
Confidence               3489999999996322     2334444555444444455444322         3558999999877653      


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--chhHHH-----HHHHHhhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--ISFFSG-----LVGLLGKYV  255 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--~~~~~~-----~~~~~~~~~  255 (319)
                                 ..-.|--.|.-++.=+    .++.-+    ++....||++..+-...  ..|...     +.....+..
T Consensus       138 -----------SrFlY~k~KGEvE~~v----~eL~F~----~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~  198 (238)
T KOG4039|consen  138 -----------SRFLYMKMKGEVERDV----IELDFK----HIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLL  198 (238)
T ss_pred             -----------cceeeeeccchhhhhh----hhcccc----EEEEecCcceecccccccccchhhheehhhhhhHHHhcc
Confidence                       1245777777766433    233332    34458999996553322  122221     122233334


Q ss_pred             cCCHHHHHHHHHHHh
Q 020927          256 IKNVEQGAATTCYVA  270 (319)
Q Consensus       256 ~~~~~~va~~i~~l~  270 (319)
                      ..++--++.+.+..+
T Consensus       199 s~pv~~~~~amvn~~  213 (238)
T KOG4039|consen  199 SYPVYGDEVAMVNVL  213 (238)
T ss_pred             CCchhhhhHhHhhcc
Confidence            445556666666644

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.23  E-value=1.3e-05  Score=63.79  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++++++|.|| ||.|++++..|++.|+ +|.++.|+.++++++.+.+    ++..+.++..+  +   +.+...   
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~~~--~---~~~~~~---   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF----GGVNIEAIPLE--D---LEEALQ---   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH----TGCSEEEEEGG--G---HCHHHH---
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc----CccccceeeHH--H---HHHHHh---
Confidence            3789999999998 8999999999999998 5999999999988887776    23445555443  2   223333   


Q ss_pred             hcCCCccEEEEccccCCC
Q 020927          104 SSGLPLNILINNAGIMAT  121 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~  121 (319)
                          ..|++|++.+....
T Consensus        75 ----~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ----EADIVINATPSGMP   88 (135)
T ss_dssp             ----TESEEEE-SSTTST
T ss_pred             ----hCCeEEEecCCCCc
Confidence                68999999986433

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.21  E-value=7e-05  Score=61.46  Aligned_cols=195  Identities=16%  Similarity=0.044  Sum_probs=119.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +.|.|.||||-+|..|+++...+|..|+.+.||+++....          ..+..++.|+.+++++.+.+.       +.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CC
Confidence            3588999999999999999999999999999999876532          357788999999998866655       78


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++|..-|...+..    +  .        -...-.+.+...++..     ...|+++|+..++....|+..-.+-.++.
T Consensus        64 DaVIsA~~~~~~~~----~--~--------~~~k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~g~rLvD~p~fP  124 (211)
T COG2910          64 DAVISAFGAGASDN----D--E--------LHSKSIEALIEALKGA-----GVPRLLVVGGAGSLEIDEGTRLVDTPDFP  124 (211)
T ss_pred             ceEEEeccCCCCCh----h--H--------HHHHHHHHHHHHHhhc-----CCeeEEEEcCccceEEcCCceeecCCCCc
Confidence            99999988643211    0  0        0111245555555543     36799999998888766652212211222


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH--H-HHHHHhhhhcCCHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS--G-LVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~--~-~~~~~~~~~~~~~~~va~~i  266 (319)
                           -..|..+++..+. .+.|..+-   .  +.-.-|+|..+-.|.-+...+.-  + +..--.....-+.+|.|-++
T Consensus       125 -----~ey~~~A~~~ae~-L~~Lr~~~---~--l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~  193 (211)
T COG2910         125 -----AEYKPEALAQAEF-LDSLRAEK---S--LDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAV  193 (211)
T ss_pred             -----hhHHHHHHHHHHH-HHHHhhcc---C--cceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHH
Confidence                 2234455555443 34454442   2  44444778766555322221000  0 00000111123788888888


Q ss_pred             HHHhc
Q 020927          267 CYVAL  271 (319)
Q Consensus       267 ~~l~~  271 (319)
                      +.-+.
T Consensus       194 lDe~E  198 (211)
T COG2910         194 LDELE  198 (211)
T ss_pred             HHHHh
Confidence            88874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.13  E-value=1.2e-05  Score=75.53  Aligned_cols=76  Identities=29%  Similarity=0.459  Sum_probs=61.0

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           32 AIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+|.|| |.+|+++++.|++++.  +|++.+|+.+++++..+.+    ...++.++.+|+.|.+++.++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            789999 9999999999999984  7999999999988877654    26789999999999999888877       56


Q ss_pred             cEEEEccccC
Q 020927          110 NILINNAGIM  119 (319)
Q Consensus       110 d~lv~nag~~  119 (319)
                      |++||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999964

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.11  E-value=1.1e-05  Score=77.24  Aligned_cols=78  Identities=14%  Similarity=0.197  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.+++..+++...    .+.++..|..+.           
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~-----------   64 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE-----------   64 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh-----------
Confidence            368899999999888 99999999999999999999975 3444444444322    356777887761           


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                       ..+.+|+||+++|+.
T Consensus        65 -~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 -FLEGVDLVVVSPGVP   79 (450)
T ss_pred             -HhhcCCEEEECCCCC
Confidence             124789999999974

>PLN00106 malate dehydrogenase

Probab=98.09  E-value=1.4e-05  Score=72.85  Aligned_cols=161  Identities=14%  Similarity=0.103  Sum_probs=99.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -.+++|+||||+|.||..++..|+.++.  .++++++++  ++.....+.+..+  ..  ...++++.+++.+.++    
T Consensus        16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~--~~--~i~~~~~~~d~~~~l~----   85 (323)
T PLN00106         16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT--PA--QVRGFLGDDQLGDALK----   85 (323)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc--Cc--eEEEEeCCCCHHHHcC----
Confidence            3457899999999999999999998774  799999987  2222223322211  11  2224334333444333    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc----ccCCCCC
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH----QFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~----~~~~p~~  180 (319)
                         ..|++|+.||....+    ...+.+.+..|+-....+.+.+.++-        ..+.|+++|...-    ....   
T Consensus        86 ---~aDiVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~~i~~~~--------p~aivivvSNPvD~~~~i~t~---  147 (323)
T PLN00106         86 ---GADLVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCEAVAKHC--------PNALVNIISNPVNSTVPIAAE---  147 (323)
T ss_pred             ---CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEeCCCccccHHHHHH---
Confidence               789999999975332    23467777777776655555554442        2446666666553    1110   


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED  219 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  219 (319)
                          -+....++++...|+.++.-...|...++.++.-.
T Consensus       148 ----~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        148 ----VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             ----HHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence                01122345556789998866667888888887754

>PRK09620 hypothetical protein; Provisional

Probab=98.08  E-value=3.7e-06  Score=72.91  Aligned_cols=83  Identities=17%  Similarity=0.174  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           27 GSGLTAIVTGAS----------------SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        27 l~~k~vlItGas----------------~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      |+||+||||+|.                |.+|.++|++|+++|++|+++++.......   ..   .++..+..+..|..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGIID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecHHH
Confidence            579999999886                899999999999999999988763211000   00   00122333333222


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMA  120 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~  120 (319)
                      ..+.+.+++.    . .++|++||+|++..
T Consensus        75 ~~~~l~~~~~----~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         75 LQDKMKSIIT----H-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHhc----c-cCCCEEEECccccc
Confidence            2222332222    1 26899999999853

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.02  E-value=3.2e-05  Score=70.68  Aligned_cols=75  Identities=24%  Similarity=0.294  Sum_probs=54.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALR-GV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++++|+|+||||+|.||..++++|+++ |. +|+++.|+.+.+.....++.           ..|+.   ++.+.    
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-----------~~~i~---~l~~~----  212 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-----------GGKIL---SLEEA----  212 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-----------cccHH---hHHHH----
Confidence            3689999999999999999999999865 64 89999999887766554331           11222   22222    


Q ss_pred             HhcCCCccEEEEccccCC
Q 020927          103 KSSGLPLNILINNAGIMA  120 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~  120 (319)
                         ....|++|+.++...
T Consensus       213 ---l~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 ---LPEADIVVWVASMPK  227 (340)
T ss_pred             ---HccCCEEEECCcCCc
Confidence               236899999999643

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.90  E-value=5.8e-05  Score=67.94  Aligned_cols=83  Identities=19%  Similarity=0.232  Sum_probs=71.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHH----CCCEEEEEeCCHHHHHHHHHHHHhhCCC--CceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLAL----RGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -++|-||+|.-|.-++.++..    .|..+.+.+||++++++.++.+.+..+.  .....+.+|.+|++++.+++++   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            589999999999999999999    6778999999999999999999876532  2233888999999999999884   


Q ss_pred             cCCCccEEEEccccCC
Q 020927          105 SGLPLNILINNAGIMA  120 (319)
Q Consensus       105 ~~~~id~lv~nag~~~  120 (319)
                          ..++|||+|...
T Consensus        84 ----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 ----ARVIVNCVGPYR   95 (423)
T ss_pred             ----hEEEEeccccce
Confidence                579999999753

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.87  E-value=5.9e-05  Score=68.72  Aligned_cols=160  Identities=16%  Similarity=0.077  Sum_probs=91.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +.++|+|+|++|.||..++..|+.++  .++++++++.  ++.....+.+..+  .  +...+.+++.+..+.++     
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~--~~v~~~td~~~~~~~l~-----   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--P--AKVTGYADGELWEKALR-----   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--C--ceEEEecCCCchHHHhC-----
Confidence            44589999999999999999999766  4799999932  2222223333221  2  22345555444333333     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC-cccccCCCCCCcCc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS-RRHQFSYPEGIRFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS-~~~~~~~p~~~~~~  184 (319)
                        ..|++|+++|....+    .+.+.+.+..|+...-.+.+.+.++-         ..++|+++| ...... +-  ...
T Consensus        76 --gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~i~~~~---------~~~iviv~SNPvdv~~-~~--~~~  137 (321)
T PTZ00325         76 --GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAAVASSA---------PKAIVGIVSNPVNSTV-PI--AAE  137 (321)
T ss_pred             --CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC---------CCeEEEEecCcHHHHH-HH--HHh
Confidence              789999999974322    23466777777766666665555442         335655555 332211 00  000


Q ss_pred             CCCCCCCCCccccchhhHHHHHH--HHHHHHHHhcc
Q 020927          185 RINDQSGYNRFSAYGQSKLANVL--HTSELARRLKE  218 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~--~~~~la~~~~~  218 (319)
                      -+....++++...|+.+ . ++.  |-..++..+.-
T Consensus       138 ~~~~~sg~p~~~viG~g-~-LDs~R~r~~la~~l~v  171 (321)
T PTZ00325        138 TLKKAGVYDPRKLFGVT-T-LDVVRARKFVAEALGM  171 (321)
T ss_pred             hhhhccCCChhheeech-h-HHHHHHHHHHHHHhCc
Confidence            01123345566678886 3 653  55566666543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.73  E-value=0.00092  Score=60.27  Aligned_cols=79  Identities=15%  Similarity=0.289  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|++++|+|+++++|.++++.+...|.+|++++++.+..+... .+     +..   ..+|..+.+..+.+.+...  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAATA--GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence            6899999999999999999999999999999999876655432 11     221   1234455444444433221  23


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++++++|
T Consensus       213 ~~d~vi~~~~  222 (325)
T cd08253         213 GVDVIIEVLA  222 (325)
T ss_pred             ceEEEEECCc
Confidence            6999999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.72  E-value=0.00021  Score=65.40  Aligned_cols=120  Identities=13%  Similarity=0.043  Sum_probs=68.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC-------CEEEEEeCCHHH--HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRG-------VHVVMAVRNMAA--CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G-------~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      -+|+||||+|.||..++..|+..+       ..|+++++++..  ++.....+....    . ....|+....+..+   
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~----~-~~~~~~~~~~~~~~---   74 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA----F-PLLKSVVATTDPEE---   74 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc----c-cccCCceecCCHHH---
Confidence            469999999999999999999855       489999996531  221111111000    0 00113322222222   


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                          .+...|++||.||......    +.-.+.++.|+    .+++.+.+.+.+..   ...+.+|++|...
T Consensus        75 ----~l~~aDiVI~tAG~~~~~~----~~R~~l~~~N~----~i~~~i~~~i~~~~---~~~~iiivvsNPv  131 (325)
T cd01336          75 ----AFKDVDVAILVGAMPRKEG----MERKDLLKANV----KIFKEQGEALDKYA---KKNVKVLVVGNPA  131 (325)
T ss_pred             ----HhCCCCEEEEeCCcCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEecCcH
Confidence                2337999999999753321    12244555554    45555555555432   1256788888744

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.66  E-value=0.00032  Score=56.87  Aligned_cols=77  Identities=18%  Similarity=0.303  Sum_probs=56.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++++++|+|+ |++|.++++.|++.| .+|++++|+.+..++..+.+...       .+..+..+..+.        
T Consensus        15 ~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--------   78 (155)
T cd01065          15 IELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-------GIAIAYLDLEEL--------   78 (155)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------ccceeecchhhc--------
Confidence            4577899999998 899999999999996 68999999988877766655321       022233333222        


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                        ....|++|++++..
T Consensus        79 --~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 --LAEADLIINTTPVG   92 (155)
T ss_pred             --cccCCEEEeCcCCC
Confidence              23789999999864

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.65  E-value=0.00041  Score=63.82  Aligned_cols=83  Identities=14%  Similarity=0.305  Sum_probs=65.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---------------------HHHHHHHHHHHhhCCCCceE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM---------------------AACREVKKAIVKEIPNAKVQ   83 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~   83 (319)
                      ++++++|+|.|+ ||+|..+++.|+..|. ++.+++++.                     .+++.+.+.+.+.+|..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            578899999996 7899999999999998 899998753                     45667778888888888888


Q ss_pred             EEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           84 AMELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        84 ~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .+..|++. +.+.++++       ..|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHhc-------CCCEEEEcCC
Confidence            88888863 34444433       6788888765

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.60  E-value=0.0002  Score=64.17  Aligned_cols=49  Identities=20%  Similarity=0.283  Sum_probs=43.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIV   74 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~   74 (319)
                      .++++|+++|+|+ ||+|++++..|++.| .+|++++|+.++++++.+.+.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            4688999999997 899999999999999 589999999988887776653

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.57  E-value=0.00059  Score=58.14  Aligned_cols=83  Identities=13%  Similarity=0.256  Sum_probs=63.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+++.+.+.+.+.+|..++..+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            57889999998 67999999999999998 89999865                   35667777778777777777777


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..++.. +.+.++++       ..|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHHh-------CCCEEEECCC
Confidence            666644 33433333       6788888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.57  E-value=0.0019  Score=58.73  Aligned_cols=79  Identities=22%  Similarity=0.355  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+++++|+|+++++|.+++..+...|++|++++++++..+.+ ..+     +..   ..+|..+.+....+.+....  +
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL-----GAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---eEEecCChHHHHHHHHHhCC--C
Confidence            578999999999999999999999999999999988765543 111     211   12466666665555443322  3


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999998

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.54  E-value=0.00056  Score=61.01  Aligned_cols=76  Identities=18%  Similarity=0.290  Sum_probs=55.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..++|+++|+|+ ||+|++++..|++.|.+|.+++|+.++.+++.+.+...  + .+.....|     +   .      .
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--~-~~~~~~~~-----~---~------~  175 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--G-EIQAFSMD-----E---L------P  175 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--C-ceEEechh-----h---h------c
Confidence            356899999999 59999999999999999999999998888777766432  1 12222111     1   0      1


Q ss_pred             CCCccEEEEccccC
Q 020927          106 GLPLNILINNAGIM  119 (319)
Q Consensus       106 ~~~id~lv~nag~~  119 (319)
                      ....|++|++++..
T Consensus       176 ~~~~DivInatp~g  189 (270)
T TIGR00507       176 LHRVDLIINATSAG  189 (270)
T ss_pred             ccCccEEEECCCCC
Confidence            23689999999863

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.53  E-value=0.00041  Score=67.75  Aligned_cols=49  Identities=31%  Similarity=0.404  Sum_probs=42.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~   73 (319)
                      ..++++|+++|+|| ||+|++++..|++.|++|++++|+.++++.+.+.+
T Consensus       374 ~~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        374 GSPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             ccCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            45678999999999 59999999999999999999999988777765544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.52  E-value=0.00012  Score=70.06  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=54.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++||+++|||+++ +|.++|+.|++.|++|++.+++........+.+...  +  +.+...+..  ..+   ..    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~~~--~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGSHP--LEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCCCC--HHH---hc----
Confidence            457899999999986 999999999999999999998654433333444332  2  333222211  111   11    


Q ss_pred             cCCCccEEEEccccCCC
Q 020927          105 SGLPLNILINNAGIMAT  121 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~  121 (319)
                        ..+|++|+++|+...
T Consensus        67 --~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 --EDFDLMVKNPGIPYT   81 (447)
T ss_pred             --CcCCEEEECCCCCCC
Confidence              148999999998543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.51  E-value=0.0016  Score=52.10  Aligned_cols=116  Identities=16%  Similarity=0.180  Sum_probs=75.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCC--ceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.|+||+|.+|..++..|+..+.  ++++++++++.++.....+....+..  ......   .+.+.           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            589999999999999999999985  79999999988887777776542222  233333   22221           2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...|++|..+|....+.    +.-.+.++.|    ..+++.+.+.+.+..    .++.++++|...
T Consensus        68 ~~aDivvitag~~~~~g----~sR~~ll~~N----~~i~~~~~~~i~~~~----p~~~vivvtNPv  121 (141)
T PF00056_consen   68 KDADIVVITAGVPRKPG----MSRLDLLEAN----AKIVKEIAKKIAKYA----PDAIVIVVTNPV  121 (141)
T ss_dssp             TTESEEEETTSTSSSTT----SSHHHHHHHH----HHHHHHHHHHHHHHS----TTSEEEE-SSSH
T ss_pred             ccccEEEEecccccccc----ccHHHHHHHh----HhHHHHHHHHHHHhC----CccEEEEeCCcH
Confidence            36899999999743321    1233344444    445555555555542    467888887643

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.51  E-value=0.003  Score=56.05  Aligned_cols=143  Identities=19%  Similarity=0.193  Sum_probs=84.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .|++.+|+|.|+ ||+|.++|+.|++.|. ++.+++.+.                   .+.+...+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            368888999975 6999999999999996 788887431                   2344555555566666666655


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeE
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRI  165 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~i  165 (319)
                      . +.-+++.+.+++.      ..+|++|.+...                   +.....+.+.+...          +-.+
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD~-------------------~~~k~~L~~~c~~~----------~ip~  149 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAIDS-------------------VRPKAALIAYCRRN----------KIPL  149 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCCC-------------------HHHHHHHHHHHHHc----------CCCE
Confidence            3 2223444444331      256777777662                   11222333333221          3356


Q ss_pred             EEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CC
Q 020927          166 VNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DG  220 (319)
Q Consensus       166 i~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g  220 (319)
                      |..++.++. ..|..+...|              .+|...+-|++.+++++.+ .|
T Consensus       150 I~~gGag~k-~dp~~~~~~d--------------i~~t~~~pla~~~R~~lr~~~~  190 (268)
T PRK15116        150 VTTGGAGGQ-IDPTQIQVVD--------------LAKTIQDPLAAKLRERLKSDFG  190 (268)
T ss_pred             EEECCcccC-CCCCeEEEEe--------------eecccCChHHHHHHHHHHHhhC
Confidence            666554433 3454433333              3455556678888888887 45

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.45  E-value=0.0032  Score=54.70  Aligned_cols=142  Identities=17%  Similarity=0.193  Sum_probs=86.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |++.+|+|.|. ||+|.++++.|+..|. ++++++.+.                   .+.+...+.+.+.+|..++..+.
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            67788999975 6999999999999997 799887432                   34555566666677777777766


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEE
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIV  166 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii  166 (319)
                      ..+.. +....++.      ..+|++|.+..-                   +.....+.+.+...          +-.+|
T Consensus        88 ~~i~~-~~~~~l~~------~~~D~VvdaiD~-------------------~~~k~~L~~~c~~~----------~ip~I  131 (231)
T cd00755          88 EFLTP-DNSEDLLG------GDPDFVVDAIDS-------------------IRAKVALIAYCRKR----------KIPVI  131 (231)
T ss_pred             eecCH-hHHHHHhc------CCCCEEEEcCCC-------------------HHHHHHHHHHHHHh----------CCCEE
Confidence            55553 33333321      257888777542                   12223333444321          22455


Q ss_pred             EeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCC
Q 020927          167 NVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDG  220 (319)
Q Consensus       167 ~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g  220 (319)
                      ...+.++. ..|..+...|              .+|.-.+-+++.+++++.++|
T Consensus       132 ~s~g~g~~-~dp~~i~i~d--------------i~~t~~~pla~~~R~~Lrk~~  170 (231)
T cd00755         132 SSMGAGGK-LDPTRIRVAD--------------ISKTSGDPLARKVRKRLRKRG  170 (231)
T ss_pred             EEeCCcCC-CCCCeEEEcc--------------EeccccCcHHHHHHHHHHHcC
Confidence            55444433 3344333333              344445567888999998887

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.44  E-value=0.0011  Score=61.10  Aligned_cols=83  Identities=19%  Similarity=0.364  Sum_probs=61.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---------------------HHHHHHHHHHHhhCCCCceE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM---------------------AACREVKKAIVKEIPNAKVQ   83 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~   83 (319)
                      +|++++|+|.|+ ||+|..+++.|+..|. +|.+++.+.                     .+.+.+.+.+.+.+|..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            578899999998 7999999999999998 899998752                     34555566666667777777


Q ss_pred             EEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           84 AMELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        84 ~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .+..|++. +.+.++++       ..|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVTA-EELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEeccCCH-HHHHHHHc-------CCCEEEEcCC
Confidence            87777753 34444433       5688887754

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.42  E-value=0.0012  Score=57.41  Aligned_cols=83  Identities=14%  Similarity=0.286  Sum_probs=63.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC-------------------CHHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVR-------------------NMAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.| .||+|.++++.|+..|. ++++++.                   ...+.+.+.+.+.+.+|..++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            47789999998 67999999999999998 7888742                   235677778888888888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..+++ .+.+.+++.       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            77774 344444443       6799998876

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.41  E-value=0.032  Score=49.30  Aligned_cols=250  Identities=16%  Similarity=0.125  Sum_probs=135.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEe--C-----C--------HHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLAL-RGVHVVMAV--R-----N--------MAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~--r-----~--------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      -.|.|||.||++|.|++.--..+= -|++-+.+.  |     .        ...+.+..+   +.  +.-..-+..|.-+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~---~k--GlyAksingDaFS  114 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAK---QK--GLYAKSINGDAFS  114 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHH---hc--Cceeeecccchhh
Confidence            458999999999999875333221 245433331  1     1        112222221   11  5556778889999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--C---------------------cccCcc-------------cccchhh
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--P---------------------FMLSKD-------------NIELQFA  135 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~---------------------~~~~~~-------------~~~~~~~  135 (319)
                      .+.-+.+++.|+..+|.+|.+|+.-+....  +                     .+.+.+             .+..+..
T Consensus       115 ~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~  194 (398)
T COG3007         115 DEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA  194 (398)
T ss_pred             HHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH
Confidence            999999999999999999999987652211  0                     001111             1222221


Q ss_pred             hhhhHHHH-HHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHH
Q 020927          136 TNHIGHFL-LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELAR  214 (319)
Q Consensus       136 vn~~~~~~-l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  214 (319)
                      |.=---|. .+.+++..-.-     ....+-|-.|-.+....+|=  .           ....-+.+|.=++.-+..+..
T Consensus       195 VMGGeDWq~WidaLl~advl-----aeg~kTiAfsYiG~~iT~~I--Y-----------w~GtiG~AK~DLd~~~~~ine  256 (398)
T COG3007         195 VMGGEDWQMWIDALLEADVL-----AEGAKTIAFSYIGEKITHPI--Y-----------WDGTIGRAKKDLDQKSLAINE  256 (398)
T ss_pred             hhCcchHHHHHHHHHhcccc-----ccCceEEEEEecCCccccce--e-----------eccccchhhhcHHHHHHHHHH
Confidence            11111111 22333321110     12334555554444443221  1           123567899999998889999


Q ss_pred             HhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcc--cccCCccc
Q 020927          215 RLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGS--YFADSNVA  289 (319)
Q Consensus       215 ~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~--~~~~~g~~  289 (319)
                      .++..|..-+|..  .=.+-|....-+   +....+.-.+++.. .+-|-+.+.+--+.. +.-..  |+  -+++.|..
T Consensus       257 kLa~~gG~A~vsV--lKavVTqASsaIP~~plYla~lfkvMKek-g~HEgcIeQi~rlfs-e~ly~--g~~~~~D~e~rl  330 (398)
T COG3007         257 KLAALGGGARVSV--LKAVVTQASSAIPMMPLYLAILFKVMKEK-GTHEGCIEQIDRLFS-EKLYS--GSKIQLDDEGRL  330 (398)
T ss_pred             HHHhcCCCeeeee--hHHHHhhhhhccccccHHHHHHHHHHHHc-CcchhHHHHHHHHHH-HHhhC--CCCCCcCccccc
Confidence            9988775444422  222333322222   22222222233332 356777777777763 33332  44  45577889


Q ss_pred             ccChhccCHHHHHHHHH
Q 020927          290 QASSQAVNTELAQKLWD  306 (319)
Q Consensus       290 ~~~~~~~~~~~~~~~~~  306 (319)
                      .+++|..+++++.++=+
T Consensus       331 R~Dd~El~~dvQ~~v~~  347 (398)
T COG3007         331 RMDDWELRPDVQDQVRE  347 (398)
T ss_pred             ccchhhcCHHHHHHHHH
Confidence            99999999988775433

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.38  E-value=0.0018  Score=56.87  Aligned_cols=83  Identities=13%  Similarity=0.301  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            478899999998 9999999999999997 78887532                   14566667777777777788777


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...+.. +.+.+++.       ..|++|.+..
T Consensus       108 ~~~i~~-~~~~~~~~-------~~DiVi~~~D  131 (245)
T PRK05690        108 NARLDD-DELAALIA-------GHDLVLDCTD  131 (245)
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEecCC
Confidence            766653 33334333       6788888765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.37  E-value=0.003  Score=57.91  Aligned_cols=101  Identities=20%  Similarity=0.340  Sum_probs=65.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc-CC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS-GL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~-~~  107 (319)
                      |.++||+||+||+|...+.-....|++++++..+.++.+ .+..+     +....   .|..+++    +.+++++. .+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~v---i~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADHV---INYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCEE---EcCCccc----HHHHHHHHcCC
Confidence            899999999999999988888888987777766665555 44433     32222   2344433    33333332 22


Q ss_pred             -CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 -PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 -~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                       .+|+++...|..                        .+...+..+..       .|+++.++...+
T Consensus       210 ~gvDvv~D~vG~~------------------------~~~~~l~~l~~-------~G~lv~ig~~~g  245 (326)
T COG0604         210 KGVDVVLDTVGGD------------------------TFAASLAALAP-------GGRLVSIGALSG  245 (326)
T ss_pred             CCceEEEECCCHH------------------------HHHHHHHHhcc-------CCEEEEEecCCC
Confidence             699999999841                        22223444443       689999998775

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.35  E-value=0.0034  Score=57.67  Aligned_cols=80  Identities=19%  Similarity=0.259  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+||+|++|..++..+...|++|+.+++++++.+.+.+.+     +... +  +|..+.++..+.+.+..  .+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~--~~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFDD-A--FNYKEEPDLDAALKRYF--PN  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCce-e--EEcCCcccHHHHHHHhC--CC
Confidence            6899999999999999999888888999999999887665544322     3211 1  23222223333333332  14


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            7899998887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06849 hypothetical protein; Provisional

Probab=97.34  E-value=0.0017  Score=61.03  Aligned_cols=83  Identities=16%  Similarity=0.139  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +.|+|||||++.++|+.+++.|.+.|.+|++++.++.......+.+      .+...+...-.+++...+.+.++.++. 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999998875543322222      122223223334444444444454444 


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|....
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899998776

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.34  E-value=0.0013  Score=59.08  Aligned_cols=78  Identities=18%  Similarity=0.178  Sum_probs=56.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|+++|.|+ ||.|++++..|+..|. +|++++|+.++++...+.+....+.  +.....+     ++.+.      
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~--~~~~~~~-----~~~~~------  189 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA--ARATAGS-----DLAAA------  189 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC--eEEEecc-----chHhh------
Confidence            567899999997 6799999999999998 7999999999999888877655433  2222211     11111      


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                       ....|++|++...
T Consensus       190 -~~~aDiVInaTp~  202 (284)
T PRK12549        190 -LAAADGLVHATPT  202 (284)
T ss_pred             -hCCCCEEEECCcC
Confidence             1368999999643

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.33  E-value=0.0015  Score=61.08  Aligned_cols=83  Identities=18%  Similarity=0.318  Sum_probs=62.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++++++++                   ..+.+.+.+.+.+.+|..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            368888999965 7999999999999998 79999876                   45677777788777777777666


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...+.. +.+.++++       ..|++|.+..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            655543 33444433       5788888876

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.31  E-value=0.0039  Score=56.91  Aligned_cols=79  Identities=19%  Similarity=0.293  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+||+|++|..++..+...|++|+.+++++++.+.+ ..+     +....   .|..+.+...+.+....  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~v---i~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDVA---FNYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCEE---EeccccccHHHHHHHhC--CC
Confidence            588999999999999999888888899999999988765544 222     32211   23333223444444332  23


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.30  E-value=0.0043  Score=57.43  Aligned_cols=80  Identities=18%  Similarity=0.252  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+||+|++|..++..+...|++|+.+++++++.+.+.+.+     +... .  .|..+.++..+.+.+..  .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~-v--i~~~~~~~~~~~i~~~~--~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE-A--FNYKEEPDLDAALKRYF--PE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE-E--EECCCcccHHHHHHHHC--CC
Confidence            5899999999999999998888888999999998887655443222     3221 1  23322223333333332  23


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.++|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6899999888

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.29  E-value=0.00082  Score=56.30  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             CCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           27 GSGLTAIVTGAS----------------SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        27 l~~k~vlItGas----------------~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      |+||+||||+|.                |-.|.+||+.++.+|++|+++..... +..          ...+..+  ++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i--~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVI--RVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEE--E-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEE--Eec
Confidence            579999999874                58999999999999999999987632 110          2245443  455


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCC
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMAT  121 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~  121 (319)
                      +.+++.+.+.+.   ....|++|++|++..-
T Consensus        68 sa~em~~~~~~~---~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   68 SAEEMLEAVKEL---LPSADIIIMAAAVSDF   95 (185)
T ss_dssp             SHHHHHHHHHHH---GGGGSEEEE-SB--SE
T ss_pred             chhhhhhhhccc---cCcceeEEEecchhhe
Confidence            555555555544   3355999999998643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.27  E-value=0.0026  Score=57.04  Aligned_cols=80  Identities=16%  Similarity=0.265  Sum_probs=56.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|+++|.|| ||-|++++..|++.|. +|.++.|+.++.+++.+.+....+...+.  ..|..   +.....     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~---~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDAR---GIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHh---HHHHHH-----
Confidence            467899999997 8999999999999997 79999999999888877765433222121  12321   111111     


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                        ...|++||+..+
T Consensus       193 --~~~divINaTp~  204 (283)
T PRK14027        193 --AAADGVVNATPM  204 (283)
T ss_pred             --hhcCEEEEcCCC
Confidence              257999998875

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.27  E-value=0.00035  Score=59.43  Aligned_cols=47  Identities=23%  Similarity=0.218  Sum_probs=41.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++++.++...+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            567899999999996 89999999999999999999999877666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.26  E-value=0.0022  Score=55.09  Aligned_cols=82  Identities=16%  Similarity=0.269  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH------------------HHHHHHHHHHHhhCCCCceEEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM------------------AACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      ++++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                  .+.+.+.+.+.+.+|..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            468889999985 8999999999999998 699988652                  34555566666666666666666


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNA  116 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~na  116 (319)
                      ..++.. .+.++++       ..|++|.+.
T Consensus       104 ~~i~~~-~~~~~~~-------~~DvVI~a~  125 (212)
T PRK08644        104 EKIDED-NIEELFK-------DCDIVVEAF  125 (212)
T ss_pred             eecCHH-HHHHHHc-------CCCEEEECC
Confidence            665542 3333332       567777664

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.26  E-value=0.0024  Score=59.29  Aligned_cols=83  Identities=18%  Similarity=0.246  Sum_probs=62.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            478899999987 8999999999999998 788887532                   5677788888888888888887


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..+++.+ ...++++       ..|++|.+..
T Consensus       104 ~~~i~~~-~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        104 VRRLTWS-NALDELR-------DADVILDGSD  127 (355)
T ss_pred             EeecCHH-HHHHHHh-------CCCEEEECCC
Confidence            7666542 3333332       5677766653

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.24  E-value=0.0016  Score=58.47  Aligned_cols=79  Identities=18%  Similarity=0.177  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|+++|.|+ ||.|++++..|++.|. +|.++.|+.++++++.+.+...   ..+.  .  +...++...       
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~--~--~~~~~~~~~-------  186 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT--R--LEGDSGGLA-------  186 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce--e--ccchhhhhh-------
Confidence            467899999976 8999999999999997 7999999998888877665321   1111  1  111111211       


Q ss_pred             cCCCccEEEEccccC
Q 020927          105 SGLPLNILINNAGIM  119 (319)
Q Consensus       105 ~~~~id~lv~nag~~  119 (319)
                      .....|++||+....
T Consensus       187 ~~~~~DiVInaTp~g  201 (282)
T TIGR01809       187 IEKAAEVLVSTVPAD  201 (282)
T ss_pred             cccCCCEEEECCCCC
Confidence            123689999998863

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.24  E-value=0.0098  Score=50.54  Aligned_cols=36  Identities=22%  Similarity=0.356  Sum_probs=32.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN   62 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~   62 (319)
                      +|+.++|+|.|+ ||+|..+++.|++.|. +|++++.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467889999998 7899999999999998 79999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00704 MDH Malate dehydrogenase

Probab=97.24  E-value=0.0022  Score=58.68  Aligned_cols=115  Identities=14%  Similarity=0.091  Sum_probs=70.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH--H--H
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASV--R--K   97 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v--~--~   97 (319)
                      +|.||||+|.||..++..|+..|.       .++++++++  +.+                .....|+.+....  .  .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~----------------~g~~~Dl~d~~~~~~~~~~   65 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL----------------EGVVMELQDCAFPLLKGVV   65 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc----------------ceeeeehhhhcccccCCcE
Confidence            589999999999999999998763       499999986  322                2333444443100  0  0


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      +.....+.+...|++|+.||....+.    +.-.+.+..|    ..+++.+.+.+.+.+   ++.+.+|++|...
T Consensus        66 i~~~~~~~~~~aDiVVitAG~~~~~g----~tR~dll~~N----~~i~~~i~~~i~~~~---~~~~iiivvsNPv  129 (323)
T cd00704          66 ITTDPEEAFKDVDVAILVGAFPRKPG----MERADLLRKN----AKIFKEQGEALNKVA---KPTVKVLVVGNPA  129 (323)
T ss_pred             EecChHHHhCCCCEEEEeCCCCCCcC----CcHHHHHHHh----HHHHHHHHHHHHHhC---CCCeEEEEeCCcH
Confidence            00111223347899999999743321    2223344434    456777777776541   1366888887644

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.22  E-value=0.0018  Score=61.23  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=56.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++.|++++|.|+ ||+|+++++.|++.|. +|.++.|+.++++.+.+.+.    ..  ..+     ..++....     
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~--~~~-----~~~~l~~~-----  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA--SAH-----YLSELPQL-----  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC--eEe-----cHHHHHHH-----
Confidence            3588999999998 9999999999999996 79999999887776655431    11  111     11223222     


Q ss_pred             hcCCCccEEEEccccCCC
Q 020927          104 SSGLPLNILINNAGIMAT  121 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~  121 (319)
                        ....|++|++.+...+
T Consensus       240 --l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        240 --IKKADIIIAAVNVLEY  255 (414)
T ss_pred             --hccCCEEEECcCCCCe
Confidence              2368999999996544

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.19  E-value=0.0015  Score=58.52  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=63.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ...++|-||+|-.|.-++++|+.+|.+.++.+||..++..+...+     +.....+  ++-+++.+++++.       .
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~--p~~~p~~~~~~~~-------~   71 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVF--PLGVPAALEAMAS-------R   71 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----Ccccccc--CCCCHHHHHHHHh-------c
Confidence            457899999999999999999999999999999999999888777     4344443  4444777776666       6


Q ss_pred             ccEEEEccccCCC
Q 020927          109 LNILINNAGIMAT  121 (319)
Q Consensus       109 id~lv~nag~~~~  121 (319)
                      .++|+||+|....
T Consensus        72 ~~VVlncvGPyt~   84 (382)
T COG3268          72 TQVVLNCVGPYTR   84 (382)
T ss_pred             ceEEEeccccccc
Confidence            7899999996543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.18  E-value=0.0021  Score=58.87  Aligned_cols=117  Identities=14%  Similarity=0.073  Sum_probs=71.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHH--HH--
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-------HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRK--FA--   99 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~--~~--   99 (319)
                      +|.|+||+|.+|..++..|+..+.       .+++.+++++.              ........|+.+......  ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            478999999999999999998664       49999996532              112334455555431100  00  


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ....+.+...|++|+.||.....    .+.+.+.+..|    ..+++.+.+.+.+.+   .+.+.+|++|...
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N----~~i~k~i~~~i~~~~---~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKN----VKIFKEQGRALDKLA---KKDCKVLVVGNPA  128 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHhhC---CCCeEEEEeCCcH
Confidence            01122344789999999974321    12345555545    456666667666541   1357888888654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.14  E-value=0.0053  Score=57.33  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=56.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+.+++++|.|+ |.+|+..++.+...|++|++++|+.++++......     +..   +..+..+.+.+.+.+.    
T Consensus       163 ~~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l~----  229 (370)
T TIGR00518       163 PGVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAVK----  229 (370)
T ss_pred             CCCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHHc----
Confidence            3467788999988 78999999999999999999999987765543322     211   2234555555544443    


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                         ..|++|+++++
T Consensus       230 ---~aDvVI~a~~~  240 (370)
T TIGR00518       230 ---RADLLIGAVLI  240 (370)
T ss_pred             ---cCCEEEEcccc
Confidence               67999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.12  E-value=0.008  Score=55.20  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=52.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      |.++||+||+|++|.+++..+...|+ +|+.+++++++.+.+.+++     +....   .|..+. ++.+.+.++.  .+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~v---i~~~~~-~~~~~i~~~~--~~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDAA---INYKTD-NVAERLRELC--PE  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcEE---EECCCC-CHHHHHHHHC--CC
Confidence            38999999999999999888778898 7999999887665544433     32211   222222 2333333332  24


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.++|
T Consensus       224 gvd~vid~~g  233 (345)
T cd08293         224 GVDVYFDNVG  233 (345)
T ss_pred             CceEEEECCC
Confidence            6999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.11  E-value=0.0089  Score=67.99  Aligned_cols=186  Identities=16%  Similarity=0.117  Sum_probs=112.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+.++.++|++.+++++.+++.+|.++|..|+++.....    +.......  +..+-.+.+.-.+..++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPL--ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----cccccccc--ccccccccccccchHHHHHHHHhhhcc
Confidence            356888999988999999999999999998887742211    00000000  223334456666777888888888777


Q ss_pred             CCCccEEEEccccCCCCcc-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          106 GLPLNILINNAGIMATPFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .+.++.+||..+....... .+...+...-...+...|.++|.+.+.+...     ..+.++.++...|..+.-+..   
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-----~~~~~~~vsr~~G~~g~~~~~--- 1897 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-----ARASFVTVSRIDGGFGYSNGD--- 1897 (2582)
T ss_pred             ccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-----CCeEEEEEEecCCccccCCcc---
Confidence            7889999998775422110 0001111111223444577777776655432     356788888877665321100   


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG  231 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG  231 (319)
                         ...+..+ .--....+++.+|+|+++.|+-.--  +|...+.|.
T Consensus      1898 ---~~~~~~~-~~~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~ 1938 (2582)
T TIGR02813      1898 ---ADSGTQQ-VKAELNQAALAGLTKTLNHEWNAVF--CRALDLAPK 1938 (2582)
T ss_pred             ---ccccccc-cccchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCC
Confidence               0000000 0012357899999999999997655  888888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.10  E-value=0.0062  Score=55.38  Aligned_cols=118  Identities=14%  Similarity=0.151  Sum_probs=76.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +.|.|.|+ |++|.+++..|+..|  .+|++++++++.++.....+.....  +..+....   .+.+.       +   
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-------l---   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-------C---   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-------h---
Confidence            36888996 899999999999999  4799999999888877777755421  12222222   22211       1   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                       ...|++|+++|....+.    +.-.+.++.|    ..+++...+.+.+..    ..+.||++|.....
T Consensus        67 -~~aDIVIitag~~~~~g----~~R~dll~~N----~~i~~~~~~~i~~~~----~~~~vivvsNP~d~  122 (306)
T cd05291          67 -KDADIVVITAGAPQKPG----ETRLDLLEKN----AKIMKSIVPKIKASG----FDGIFLVASNPVDV  122 (306)
T ss_pred             -CCCCEEEEccCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEecChHHH
Confidence             37899999999743321    1122333333    456666666666542    46788888875543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.09  E-value=0.01  Score=52.00  Aligned_cols=104  Identities=21%  Similarity=0.242  Sum_probs=67.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..|.+++|+|+++ +|++++..+...|.+|++++++++..+.. +..     +..   ..+|..+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD---HVIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc---eeccCCcCCHHHHHH---HhcC
Confidence            4688999999999 99999999888999999999987665443 221     211   112444433333333   2233


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +.+|++|+++|..                       ...+..+..+..       .|+++.++....
T Consensus       200 ~~~d~vi~~~~~~-----------------------~~~~~~~~~l~~-------~G~~v~~~~~~~  236 (271)
T cd05188         200 GGADVVIDAVGGP-----------------------ETLAQALRLLRP-------GGRIVVVGGTSG  236 (271)
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHhccc-------CCEEEEEccCCC
Confidence            4799999998831                       133444455543       789998887543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.08  E-value=0.013  Score=53.38  Aligned_cols=123  Identities=12%  Similarity=0.165  Sum_probs=80.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ++-.+++|.|+|+ |++|..++..|+..|.  .+++++++++.++.....+....+- .++....   .+.       ++
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~-------~~   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY-------SD   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH-------HH
Confidence            4456789999998 9999999999999996  7999999998888777777665322 1222221   121       11


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                          +...|++|..||....+.    ..-.+.++.|    ..+++.+.+.+.+.+    ..+.+|++|.....
T Consensus        71 ----~~~adivIitag~~~k~g----~~R~dll~~N----~~i~~~i~~~i~~~~----~~~~vivvsNP~d~  127 (315)
T PRK00066         71 ----CKDADLVVITAGAPQKPG----ETRLDLVEKN----LKIFKSIVGEVMASG----FDGIFLVASNPVDI  127 (315)
T ss_pred             ----hCCCCEEEEecCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEccCcHHH
Confidence                227899999999743321    1122334444    345556566665542    36788888875543

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.04  E-value=0.0066  Score=48.06  Aligned_cols=80  Identities=19%  Similarity=0.379  Sum_probs=61.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC-------------------CHHHHHHHHHHHHhhCCCCceEEEEcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVR-------------------NMAACREVKKAIVKEIPNAKVQAMELD   88 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~D   88 (319)
                      +++|+|.| .|++|..+++.|+..|. ++++++.                   ...+.+...+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            56788887 47899999999999998 7988753                   224677788888888889999999888


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           89 LSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        89 l~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 4445555553       6799988765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.02  E-value=0.014  Score=53.28  Aligned_cols=73  Identities=21%  Similarity=0.260  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++++|+|++ |+|.-.++.....|++|++++|++++.+.+.+.      +.....   |.++++..+.+-+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l------GAd~~i---~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL------GADHVI---NSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh------CCcEEE---EcCCchhhHHhHh-------
Confidence            58999999999 999988887777999999999999887655432      333332   3334444444333       


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      .+|++|..++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2799999888

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.01  E-value=0.0075  Score=51.20  Aligned_cols=84  Identities=18%  Similarity=0.319  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---------------------HHHHHHHHHHHhhCCCCceE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM---------------------AACREVKKAIVKEIPNAKVQ   83 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~   83 (319)
                      .+++.+|+|.|+++ +|.++++.|+..|. ++.+++.+.                     .+++.+.+.+++.+|..+++
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            36788899997765 99999999999998 688886431                     24455566677777777777


Q ss_pred             EEEcCCCC-HHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           84 AMELDLSS-LASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        84 ~~~~Dl~~-~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .+..++.+ .+....++.       ..|++|.+..
T Consensus        95 ~~~~~~~~~~~~~~~~~~-------~~dvVi~~~d  122 (198)
T cd01485          95 IVEEDSLSNDSNIEEYLQ-------KFTLVIATEE  122 (198)
T ss_pred             EEecccccchhhHHHHHh-------CCCEEEECCC
Confidence            77666653 233333333       5677776643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.01  E-value=0.0059  Score=50.70  Aligned_cols=77  Identities=18%  Similarity=0.355  Sum_probs=49.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH------------------HHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRNM------------------AACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      +|+|.|+ ||+|.++++.|+..|. ++++++.+.                  .+.+...+.+.+.+|..++..+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            3778874 8999999999999998 699998754                  3344445555555555566555555443


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNA  116 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~na  116 (319)
                       +.+.++++       ..|++|.+.
T Consensus        80 -~~~~~~l~-------~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLFG-------DCDIVVEAF   96 (174)
T ss_pred             -hhHHHHhc-------CCCEEEECC
Confidence             22222222       456666663

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.99  E-value=0.0059  Score=51.77  Aligned_cols=82  Identities=18%  Similarity=0.272  Sum_probs=58.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .+++++|+|.|+ +|+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999975 5599999999999998 68888632                   23566677777888888888877


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...+.+  ...++++       ..|++|.+..
T Consensus        97 ~~~~~~--~~~~~~~-------~~dvVi~~~~  119 (197)
T cd01492          97 TDDISE--KPEEFFS-------QFDVVVATEL  119 (197)
T ss_pred             ecCccc--cHHHHHh-------CCCEEEECCC
Confidence            766652  1223332       6788887644

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14968 putative methyltransferase; Provisional

Probab=96.99  E-value=0.014  Score=48.56  Aligned_cols=80  Identities=24%  Similarity=0.211  Sum_probs=56.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCc-eEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK-VQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+++++|-.|++.|.   ++..|++++.+|+.++++++.++.+.+.+.......+ +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            467889999988766   5666666688999999999888777666654422222 88888887542         111 


Q ss_pred             CCCccEEEEccccCC
Q 020927          106 GLPLNILINNAGIMA  120 (319)
Q Consensus       106 ~~~id~lv~nag~~~  120 (319)
                       ..+|.++.|.....
T Consensus        89 -~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 -DKFDVILFNPPYLP  102 (188)
T ss_pred             -cCceEEEECCCcCC
Confidence             26899999987643

>PRK08328 hypothetical protein; Provisional

Probab=96.98  E-value=0.0075  Score=52.48  Aligned_cols=36  Identities=25%  Similarity=0.377  Sum_probs=30.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN   62 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~   62 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467888999975 5999999999999998 79898754

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.93  E-value=0.0064  Score=54.74  Aligned_cols=84  Identities=20%  Similarity=0.285  Sum_probs=53.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM---AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ..++++|+++|.|| ||-+++++..|+..|. +|.++.|+.   ++++.+.+.+.... +..+.+.  ++.+.+.+..  
T Consensus       119 ~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~-~~~~~~~--~~~~~~~l~~--  192 (288)
T PRK12749        119 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVT--DLADQQAFAE--  192 (288)
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhcc-CceEEEe--chhhhhhhhh--
Confidence            35678999999997 5559999999999997 799999985   46666655543321 1112222  2211111111  


Q ss_pred             HHHHhcCCCccEEEEcccc
Q 020927          100 SEFKSSGLPLNILINNAGI  118 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~  118 (319)
                           ...+.|+|||+..+
T Consensus       193 -----~~~~aDivINaTp~  206 (288)
T PRK12749        193 -----ALASADILTNGTKV  206 (288)
T ss_pred             -----hcccCCEEEECCCC
Confidence                 22368999998865

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.93  E-value=0.0021  Score=56.69  Aligned_cols=75  Identities=13%  Similarity=0.255  Sum_probs=55.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++|||+|||+- |+.++++|.++|++|++..++....+...        ......+..+..+.+++.+++.+.     ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~--------~~g~~~v~~g~l~~~~l~~~l~~~-----~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP--------IHQALTVHTGALDPQELREFLKRH-----SI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc--------ccCCceEEECCCCHHHHHHHHHhc-----CC
Confidence            46999999998 99999999999999999988875433221        111233446777777777777653     79


Q ss_pred             cEEEEcccc
Q 020927          110 NILINNAGI  118 (319)
Q Consensus       110 d~lv~nag~  118 (319)
                      |++|..+..
T Consensus        67 ~~VIDAtHP   75 (256)
T TIGR00715        67 DILVDATHP   75 (256)
T ss_pred             CEEEEcCCH
Confidence            999999874

This enzyme was found to be a monomer by gel filtration.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.93  E-value=0.0066  Score=54.53  Aligned_cols=80  Identities=16%  Similarity=0.340  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++.+++|+|+++++|++++..+...|++|++++++.+..+.+ ..+     +..   ..+|..+.+....+.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence            678999999999999999999999999999999987665543 222     221   123444443333333322 1 23


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|+++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999983

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.92  E-value=0.0065  Score=54.67  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=38.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACRE   68 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~   68 (319)
                      .++.|++++|.|+ |++|+++++.|...|++|++++|++++.+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4789999999999 669999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.90  E-value=0.0082  Score=55.97  Aligned_cols=83  Identities=16%  Similarity=0.302  Sum_probs=60.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            367888999976 6999999999999997 79998753                   35667777777777777777777


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...++ ++.+.++++       ..|++|.+..
T Consensus       117 ~~~i~-~~~~~~~~~-------~~DlVid~~D  140 (370)
T PRK05600        117 RERLT-AENAVELLN-------GVDLVLDGSD  140 (370)
T ss_pred             eeecC-HHHHHHHHh-------CCCEEEECCC
Confidence            66665 333434333       5677776654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.90  E-value=0.0086  Score=52.43  Aligned_cols=83  Identities=16%  Similarity=0.315  Sum_probs=56.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            578889999975 6999999999999997 788876532                   3445555666666666666666


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...+.. +.+.++++       ..|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~~-------~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALIA-------EHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHhh-------cCCEEEEcCC
Confidence            554433 23333332       5677776665

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.88  E-value=0.015  Score=51.83  Aligned_cols=106  Identities=16%  Similarity=0.217  Sum_probs=73.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.|++|++|+|.+|.-.. ++|+ +|.+||.+.-++++..-+.+++     +-..   .+|-..+ ++.+.+.+..  -
T Consensus       150 ~GetvvVSaAaGaVGsvvg-QiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD~---~idyk~~-d~~~~L~~a~--P  217 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVG-QIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFDA---GIDYKAE-DFAQALKEAC--P  217 (340)
T ss_pred             CCCEEEEEecccccchHHH-HHHHhhCCeEEEecCCHHHHHHHHHhc-----CCce---eeecCcc-cHHHHHHHHC--C
Confidence            5899999999999997544 4554 6889999999988877665544     2111   1244444 2333333221  2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ..||+.+-|.|-                        .++.++++.|..       .+||+..+-++.+..
T Consensus       218 ~GIDvyfeNVGg------------------------~v~DAv~~~ln~-------~aRi~~CG~IS~YN~  256 (340)
T COG2130         218 KGIDVYFENVGG------------------------EVLDAVLPLLNL-------FARIPVCGAISQYNA  256 (340)
T ss_pred             CCeEEEEEcCCc------------------------hHHHHHHHhhcc-------ccceeeeeehhhcCC
Confidence            479999999994                        256677787765       679999998888764

>PRK08223 hypothetical protein; Validated

Probab=96.87  E-value=0.0058  Score=54.57  Aligned_cols=64  Identities=14%  Similarity=0.209  Sum_probs=45.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +|++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            478899999976 5999999999999998 788886432                   3444455555555555556555


Q ss_pred             EcCCC
Q 020927           86 ELDLS   90 (319)
Q Consensus        86 ~~Dl~   90 (319)
                      ...++
T Consensus       103 ~~~l~  107 (287)
T PRK08223        103 PEGIG  107 (287)
T ss_pred             ecccC
Confidence            55554

>PRK05086 malate dehydrogenase; Provisional

Probab=96.86  E-value=0.0051  Score=56.05  Aligned_cols=118  Identities=17%  Similarity=0.125  Sum_probs=63.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHH-CC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLAL-RG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~-~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.++|.||+|+||.+++..|.. .+  ..+++.+|++. .+.....+.+.  +.......++-.+   +.+.       .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~i~~~~~~d---~~~~-------l   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGED---PTPA-------L   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCceEEEeCCCC---HHHH-------c
Confidence            4689999999999999998865 33  46888888743 21111111110  1011111111111   1111       2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...|++|.++|....+.    ..-...+..|.-    +++.+.+.|.+..    .++.|+++|...
T Consensus        68 ~~~DiVIitaG~~~~~~----~~R~dll~~N~~----i~~~ii~~i~~~~----~~~ivivvsNP~  121 (312)
T PRK05086         68 EGADVVLISAGVARKPG----MDRSDLFNVNAG----IVKNLVEKVAKTC----PKACIGIITNPV  121 (312)
T ss_pred             CCCCEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhC----CCeEEEEccCch
Confidence            36899999999754321    122344555554    4444455554431    244666666655

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.85  E-value=0.0043  Score=56.74  Aligned_cols=165  Identities=12%  Similarity=0.024  Sum_probs=98.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCHHH--HHHHHHHHHhhC-CC-CceEEEEcCCCCHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNMAA--CREVKKAIVKEI-PN-AKVQAMELDLSSLASVRK   97 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~~~--~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~v~~   97 (319)
                      .+.|.|+||+|.||..++..|+..|.       .+++.+++++.  ++.....+.+.. +- .++.. ..  .+      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~~--~~------   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-TD--DP------   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-ec--Cc------
Confidence            46899999999999999999998884       69999985432  444444443321 11 11111 10  11      


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                       .+    .....|++|.+||....+. .   .-.+.+..|    ..+++.+.+.+.+.+.   +.+.+|++|...-...+
T Consensus        73 -~~----~~~daDivvitaG~~~k~g-~---tR~dll~~N----~~i~~~i~~~i~~~~~---~~~iiivvsNPvD~~t~  136 (322)
T cd01338          73 -NV----AFKDADWALLVGAKPRGPG-M---ERADLLKAN----GKIFTAQGKALNDVAS---RDVKVLVVGNPCNTNAL  136 (322)
T ss_pred             -HH----HhCCCCEEEEeCCCCCCCC-C---cHHHHHHHH----HHHHHHHHHHHHhhCC---CCeEEEEecCcHHHHHH
Confidence             11    1237899999999743321 1   122334433    4577777777766521   26788888865422210


Q ss_pred             CCCCcCcCCCCCC-CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEE
Q 020927          178 PEGIRFDRINDQS-GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITA  225 (319)
Q Consensus       178 p~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v  225 (319)
                      -       ..... +++....|+.++.--..|...+++.+.-.-..|+.
T Consensus       137 ~-------~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         137 I-------AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             H-------HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence            0       00111 24445689999988888999999888765433554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.84  E-value=0.013  Score=46.92  Aligned_cols=78  Identities=19%  Similarity=0.271  Sum_probs=54.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3788886 8999999999999998 78888643                   2455666667777777777777766665


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .... ..+       +.+.|++|.+..
T Consensus        80 ~~~~-~~~-------~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-DDF-------LDGVDLVIDAID   98 (143)
T ss_pred             hhhH-HHH-------hcCCCEEEECCC
Confidence            4322 121       236788887766

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.81  E-value=0.0085  Score=54.35  Aligned_cols=79  Identities=23%  Similarity=0.361  Sum_probs=52.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      +|||.|+ ||+|-++++.|+..|. ++.++|.+                   ..+++.+.+.+.+.+|..++..+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3788886 8999999999999998 78887632                   2445556666666666677777777766


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      +.....++++       ..|++|.+..
T Consensus        80 ~~~~~~~f~~-------~~DvVv~a~D   99 (312)
T cd01489          80 DPDFNVEFFK-------QFDLVFNALD   99 (312)
T ss_pred             CccchHHHHh-------cCCEEEECCC
Confidence            5322222222       4566665543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.77  E-value=0.0074  Score=53.94  Aligned_cols=79  Identities=23%  Similarity=0.313  Sum_probs=57.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.+|++++|.|| ||-+++++..|++.|. +|+++.|+.++++++.+.+....+  .+..  .++.+.+...       
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~~--~~~~~~~~~~-------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVEA--AALADLEGLE-------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--cccc--cccccccccc-------
Confidence            4567899999986 6789999999999996 799999999999988887755421  1111  2222221111       


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                          ..|++||+....
T Consensus       190 ----~~dliINaTp~G  201 (283)
T COG0169         190 ----EADLLINATPVG  201 (283)
T ss_pred             ----ccCEEEECCCCC
Confidence                469999999763

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.77  E-value=0.0088  Score=54.33  Aligned_cols=41  Identities=27%  Similarity=0.428  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACRE   68 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~   68 (319)
                      .+.+++|+||++++|+++++.+...|.+|+.++++.+..+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999988765444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.75  E-value=0.046  Score=49.43  Aligned_cols=42  Identities=29%  Similarity=0.330  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      .++.|++++|.|+ |++|+.+++.|...|++|++++|+++..+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            5678999999997 67999999999999999999999976543

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.74  E-value=0.0088  Score=55.25  Aligned_cols=80  Identities=19%  Similarity=0.277  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      -+|+.+||.||+||+|.+.+.-....|+..+++.++.+..+ ..+.+     +..   ...|..+++-++.+.+..   .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GAd---~vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GAD---EVVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CCc---EeecCCCHHHHHHHHhhc---C
Confidence            36889999999999999998888888865555555554433 22322     322   224677744433333321   4


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|+++-|.|-
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            589999999995

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.73  E-value=0.0091  Score=56.81  Aligned_cols=75  Identities=25%  Similarity=0.382  Sum_probs=54.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++.+++++|.|+ |.+|..+++.|...|. +|++++|+.+.++...+.+     +.       +....++..+.+     
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~-------~~~~~~~~~~~l-----  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GG-------EAIPLDELPEAL-----  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CC-------cEeeHHHHHHHh-----
Confidence            578999999987 9999999999999997 7999999988776655543     21       111223333322     


Q ss_pred             cCCCccEEEEccccCC
Q 020927          105 SGLPLNILINNAGIMA  120 (319)
Q Consensus       105 ~~~~id~lv~nag~~~  120 (319)
                        ...|++|.+.|...
T Consensus       241 --~~aDvVI~aT~s~~  254 (423)
T PRK00045        241 --AEADIVISSTGAPH  254 (423)
T ss_pred             --ccCCEEEECCCCCC
Confidence              26799999988543

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.72  E-value=0.012  Score=52.66  Aligned_cols=77  Identities=16%  Similarity=0.193  Sum_probs=54.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC-CHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS-SLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~~i  102 (319)
                      .+. .|+++.|+|++| ||.--++.--+.|++|++.+++..+-++..+.+     +.....   |.+ +++.++++.+. 
T Consensus       178 g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~fv---~~~~d~d~~~~~~~~-  246 (360)
T KOG0023|consen  178 GLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVFV---DSTEDPDIMKAIMKT-  246 (360)
T ss_pred             CCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----CcceeE---EecCCHHHHHHHHHh-
Confidence            344 799999999998 997666665567999999999987777777665     434433   666 77777766663 


Q ss_pred             HhcCCCccEEEEccc
Q 020927          103 KSSGLPLNILINNAG  117 (319)
Q Consensus       103 ~~~~~~id~lv~nag  117 (319)
                            .|.+++.+.
T Consensus       247 ------~dg~~~~v~  255 (360)
T KOG0023|consen  247 ------TDGGIDTVS  255 (360)
T ss_pred             ------hcCcceeee
Confidence                  355555544

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.69  E-value=0.011  Score=53.87  Aligned_cols=73  Identities=25%  Similarity=0.439  Sum_probs=53.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++.+++++|.|+ |.+|..+++.|...|. +|++++|+.++.+++.+.+     +.  ..+     +.+++.+.+.    
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~----  237 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN----  237 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh----
Confidence            368999999987 9999999999999875 7999999988777665554     22  121     2233333333    


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                         ..|++|.+.+.
T Consensus       238 ---~aDvVi~at~~  248 (311)
T cd05213         238 ---EADVVISATGA  248 (311)
T ss_pred             ---cCCEEEECCCC
Confidence               57999999985

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.68  E-value=0.0064  Score=50.64  Aligned_cols=46  Identities=26%  Similarity=0.210  Sum_probs=38.0

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      .....++.|+++.|.|. |.||+++|+.|...|++|+.++|+.....
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            34456789999999975 89999999999999999999999887544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.65  E-value=0.053  Score=52.57  Aligned_cols=113  Identities=19%  Similarity=0.219  Sum_probs=72.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-------------
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-------------   92 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-------------   92 (319)
                      ...+.+|+|+|+ |.+|+..+..+...|+.|+++++++++.+.... +     +..  ++..|..+.             
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~  232 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSE  232 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcch
Confidence            456899999986 689999999999999999999999887664432 2     433  333333221             


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +..+...+.+.+..+..|++|.++|+.....                 +..+.+..+..|+.       .++||.++..
T Consensus       233 ~~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp-------GgvIVdvg~~  287 (509)
T PRK09424        233 EFIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP-------GSVIVDLAAE  287 (509)
T ss_pred             hHHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC-------CCEEEEEccC
Confidence            1112222222333357999999999743211                 11234666777754       6788888763

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.013  Score=56.11  Aligned_cols=79  Identities=18%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++.+|+++|+|++ ++|.++|+.|+++|++|++.+.+....  ..+.+...  ...+.+.......  .   ..     
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~--~~gi~~~~g~~~~--~---~~-----   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM--FDGLVFYTGRLKD--A---LD-----   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc--cCCcEEEeCCCCH--H---HH-----
Confidence            34679999999986 999999999999999999998765421  12223221  1234444333221  1   11     


Q ss_pred             cCCCccEEEEccccCC
Q 020927          105 SGLPLNILINNAGIMA  120 (319)
Q Consensus       105 ~~~~id~lv~nag~~~  120 (319)
                        ...|.+|.+.|+..
T Consensus        66 --~~~d~vv~spgi~~   79 (445)
T PRK04308         66 --NGFDILALSPGISE   79 (445)
T ss_pred             --hCCCEEEECCCCCC
Confidence              26799999999863

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.64  E-value=0.012  Score=55.95  Aligned_cols=75  Identities=20%  Similarity=0.396  Sum_probs=54.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++++...+.+     +..  .+.     .++..+.+.    
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~--~i~-----~~~l~~~l~----  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGE--AVK-----FEDLEEYLA----  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCe--Eee-----HHHHHHHHh----
Confidence            588999999997 999999999999999 58999999988766555433     211  221     123333333    


Q ss_pred             cCCCccEEEEccccCC
Q 020927          105 SGLPLNILINNAGIMA  120 (319)
Q Consensus       105 ~~~~id~lv~nag~~~  120 (319)
                         ..|++|.+.+...
T Consensus       240 ---~aDvVi~aT~s~~  252 (417)
T TIGR01035       240 ---EADIVISSTGAPH  252 (417)
T ss_pred             ---hCCEEEECCCCCC
Confidence               6799999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.63  E-value=0.0093  Score=57.15  Aligned_cols=73  Identities=19%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .++|.|+ |.+|+.+++.|.++|..|++++++++..+...+       ...+.++.+|.++...++++      ...+.|
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~-------~~~~~~~~gd~~~~~~l~~~------~~~~a~   67 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD-------RLDVRTVVGNGSSPDVLREA------GAEDAD   67 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-------hcCEEEEEeCCCCHHHHHHc------CCCcCC
Confidence            6888887 999999999999999999999999887665433       12466777788776655443      112566


Q ss_pred             EEEEccc
Q 020927          111 ILINNAG  117 (319)
Q Consensus       111 ~lv~nag  117 (319)
                      .+|.+.+
T Consensus        68 ~vi~~~~   74 (453)
T PRK09496         68 LLIAVTD   74 (453)
T ss_pred             EEEEecC
Confidence            6666554

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.60  E-value=0.022  Score=51.80  Aligned_cols=79  Identities=19%  Similarity=0.325  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+++|.|+++++|.+++..+...|.+|+.++++.+..+...+.+     +.. .+  .|..+.+..+.+. +..  .+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~--~~~~~~~~~~~v~-~~~--~~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AA--INYKTPDLAEALK-EAA--PD  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eE--EecCChhHHHHHH-Hhc--cC
Confidence            5789999999999999999999999999999999887655432212     211 11  1223333222222 222  14


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.++|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            7999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.58  E-value=0.015  Score=53.00  Aligned_cols=121  Identities=20%  Similarity=0.238  Sum_probs=69.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++|.|+||+|.+|..++..|+..|.  .|++++|++  +.++.....+........... .+..+.  +... +      
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~~~-l------   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DLSD-V------   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CHHH-h------
Confidence            4689999999999999999999986  599999954  444444433332211100000 111111  1111 2      


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                       ...|++|.++|....+.    ..-.+.++.|.    .+++.+.+.+.+..    .++.||++++...
T Consensus        71 -~~aDiViitag~p~~~~----~~r~dl~~~n~----~i~~~~~~~i~~~~----~~~~viv~~npvd  125 (309)
T cd05294          71 -AGSDIVIITAGVPRKEG----MSRLDLAKKNA----KIVKKYAKQIAEFA----PDTKILVVTNPVD  125 (309)
T ss_pred             -CCCCEEEEecCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEeCCchH
Confidence             27899999999743211    11123334343    44555555554432    3678888888653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK04148 hypothetical protein; Provisional

Probab=96.55  E-value=0.0077  Score=47.47  Aligned_cols=57  Identities=23%  Similarity=0.200  Sum_probs=46.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA   93 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   93 (319)
                      .+++.+++.|.+  .|.++|..|++.|.+|++++.++...+.+.+.        .+.++..|+.+++
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            356889999988  88889999999999999999999876654332        4678888988753

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.54  E-value=0.039  Score=53.35  Aligned_cols=85  Identities=18%  Similarity=0.146  Sum_probs=58.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-------------H
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-------------L   92 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-------------~   92 (319)
                      ...+.+++|.|+ |.+|...+..+...|+.|++++++.+..+.... +     +  ..++..|..+             .
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----G--a~~v~v~~~e~g~~~~gYa~~~s~  231 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----G--AEFLELDFKEEGGSGDGYAKVMSE  231 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----C--CeEEeccccccccccccceeecCH
Confidence            456789999995 899999999999999999999999876553332 2     2  3344455422             2


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccC
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIM  119 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~  119 (319)
                      +..++..+.+.+.....|++|+++-+.
T Consensus       232 ~~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       232 EFIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECcccC
Confidence            334444444555556799999999543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.53  E-value=0.016  Score=51.48  Aligned_cols=119  Identities=14%  Similarity=0.104  Sum_probs=73.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC----CEEEEEeCCHHHHHHHHHHHHhhCCCC-ceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           32 AIVTGASSGIGTETARVLALRG----VHVVMAVRNMAACREVKKAIVKEIPNA-KVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.|+||+|.+|..++..|+..|    .+|++.+++++.++.....+++..... ......   ++  +..+.+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~---~~--d~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI---TD--DPYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE---CC--chHHHh-------
Confidence            4789998899999999999999    689999999888777777765542111 111111   11  122222       


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|..+|......   ... ...    +.....+.+.+.+.+.+..    +++.+|++|.....
T Consensus        69 ~~aDiVv~t~~~~~~~g---~~r-~~~----~~~n~~i~~~i~~~i~~~~----p~a~~i~~tNP~d~  124 (263)
T cd00650          69 KDADVVIITAGVGRKPG---MGR-LDL----LKRNVPIVKEIGDNIEKYS----PDAWIIVVSNPVDI  124 (263)
T ss_pred             CCCCEEEECCCCCCCcC---CCH-HHH----HHHHHHHHHHHHHHHHHHC----CCeEEEEecCcHHH
Confidence            26899999999643321   111 112    2234445666666665542    46788888765533

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.53  E-value=0.035  Score=47.83  Aligned_cols=42  Identities=21%  Similarity=0.321  Sum_probs=37.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      +|.|.||+|.+|.++++.|++.|++|++.+|+++..+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998887665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.53  E-value=0.015  Score=44.55  Aligned_cols=71  Identities=18%  Similarity=0.246  Sum_probs=53.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccE
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNI  111 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~  111 (319)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+...+.        .+.++.+|.++++.++++--      .+.+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a~i------~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERAGI------EKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHTTG------GCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhcCc------cccCE
Confidence            567777 5799999999999777999999999876655432        37789999999988777621      26788


Q ss_pred             EEEccc
Q 020927          112 LINNAG  117 (319)
Q Consensus       112 lv~nag  117 (319)
                      +|...+
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            887766

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.49  E-value=0.012  Score=51.07  Aligned_cols=74  Identities=18%  Similarity=0.271  Sum_probs=58.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH-HHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF-ASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~-~~~i~~~~~~  108 (319)
                      +.++|.| .|-+|+.+|+.|.++|++|++++++++.+++....      ....+.+.+|-++++.++++ +.       .
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~agi~-------~   66 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAGID-------D   66 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcCCC-------c
Confidence            3466666 46799999999999999999999999887764432      23578889999999887776 33       6


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|++|...|
T Consensus        67 aD~vva~t~   75 (225)
T COG0569          67 ADAVVAATG   75 (225)
T ss_pred             CCEEEEeeC
Confidence            799998887

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.48  E-value=0.027  Score=53.30  Aligned_cols=43  Identities=19%  Similarity=0.233  Sum_probs=37.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      ...+.|++++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            44579999999997 68999999999999999999999886543

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.47  E-value=0.034  Score=52.43  Aligned_cols=45  Identities=20%  Similarity=0.293  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      ...+.|++|+|.|++ .||+.+++.+...|++|+++++++.+++..
T Consensus       197 ~~~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         197 DVMIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            345789999999986 799999999999999999999998766543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.46  E-value=0.025  Score=49.28  Aligned_cols=78  Identities=22%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           32 AIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      |+|.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            67777 67999999999999998 788886422                   3445555556666666667666666654


Q ss_pred             HHHH-HHHHHHHHhcCCCccEEEEccc
Q 020927           92 LASV-RKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        92 ~~~v-~~~~~~i~~~~~~id~lv~nag  117 (319)
                      +.+. ..++       ..+|++|.+..
T Consensus        81 ~~~~~~~f~-------~~~DvVi~a~D  100 (234)
T cd01484          81 EQDFNDTFF-------EQFHIIVNALD  100 (234)
T ss_pred             hhhchHHHH-------hCCCEEEECCC
Confidence            3221 1122       25677776543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.46  E-value=0.024  Score=50.97  Aligned_cols=79  Identities=22%  Similarity=0.410  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++++|+|+++++|.+++..+...|++|+++.++++..+.. ..+     +...   ..+..+.+....+.... . ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~~-~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI---AINYREEDFVEVVKAET-G-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCchhHHHHHHHHc-C-CC
Confidence            588999999999999999999999999999999987765432 221     2211   12333333333332221 1 13


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|+++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            6999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.45  E-value=0.0036  Score=43.70  Aligned_cols=35  Identities=26%  Similarity=0.339  Sum_probs=23.3

Q ss_pred             CC-CEEEEeCCCCchhHH--HHHHHHHCCCEEEEEeCCH
Q 020927           28 SG-LTAIVTGASSGIGTE--TARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~-k~vlItGas~gIG~a--ia~~La~~G~~Vv~~~r~~   63 (319)
                      +| |+|||+|+|+|.|+|  |+..| ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            45 899999999999999  55555 6677877776543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.45  E-value=0.0084  Score=49.44  Aligned_cols=39  Identities=28%  Similarity=0.352  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            578999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.012  Score=52.81  Aligned_cols=39  Identities=26%  Similarity=0.312  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~   62 (319)
                      ..+++||.++|.|+++-+|++++..|+++|++|.++.|.
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            467899999999999999999999999999999998874

>PRK14851 hypothetical protein; Provisional

Probab=96.43  E-value=0.023  Score=57.08  Aligned_cols=83  Identities=10%  Similarity=0.185  Sum_probs=62.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC-------------------CHHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVR-------------------NMAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++.+|+|.| .||+|..+++.|+..|. ++++++-                   ...+.+.+.+.+.+.+|..++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            46889999998 67999999999999998 7888752                   124566667777777888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...++ .+.+.++++       .+|+||.+.-
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence            88776 345555554       5677775554

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.42  E-value=0.016  Score=52.68  Aligned_cols=78  Identities=15%  Similarity=0.284  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+||++++|.+++..+...|++|+.+++++++.+.+.+ +     +....   .|..+++..++ +.+..  .+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~~v---i~~~~~~~~~~-v~~~~--~~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFDAV---FNYKTVSLEEA-LKEAA--PD  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCEE---EeCCCccHHHH-HHHHC--CC
Confidence            67999999999999999988888889999999998876554432 2     32211   23333322222 22222  14


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            6899998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.41  E-value=0.0088  Score=57.77  Aligned_cols=48  Identities=21%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      ..++++++++|+|+ ||+|++++..|++.|++|++++|+.++.+...+.
T Consensus       327 ~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        327 NIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            34678999999996 6999999999999999999999998877665543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.35  E-value=0.012  Score=56.29  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=54.2

Q ss_pred             CCCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           26 DGSGLTAIVTGAS----------------SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        26 ~l~~k~vlItGas----------------~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      +|+||.||||+|.                |-.|++||++++.+|++|.+++-... +         . +...+..+.+  
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---------~-~p~~v~~i~V--  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L---------A-DPQGVKVIHV--  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C---------C-CCCCceEEEe--
Confidence            5899999999884                47999999999999999999874321 0         0 1334555433  


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMAT  121 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~  121 (319)
                      ..   ..++.+.+.+.+ +.|++|++|++...
T Consensus       320 ~t---a~eM~~av~~~~-~~Di~I~aAAVaDy  347 (475)
T PRK13982        320 ES---ARQMLAAVEAAL-PADIAIFAAAVADW  347 (475)
T ss_pred             cC---HHHHHHHHHhhC-CCCEEEEeccccce
Confidence            33   344444444444 36999999998543

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.32  E-value=0.11  Score=47.91  Aligned_cols=41  Identities=24%  Similarity=0.250  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.+++|.|+ |++|..++..+...|.+|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999998888999999999998776544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK07411 hypothetical protein; Validated

Probab=96.31  E-value=0.024  Score=53.31  Aligned_cols=83  Identities=18%  Similarity=0.298  Sum_probs=60.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +++..+|+|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+++.+.+.+.+.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            477889999975 5999999999999998 78887531                   24566777888888888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...++.. ...+++.       ..|++|.+..
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~d  137 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGTD  137 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECCC
Confidence            7777653 3333333       5677776653

>PLN00203 glutamyl-tRNA reductase

Probab=96.31  E-value=0.021  Score=55.57  Aligned_cols=79  Identities=14%  Similarity=0.268  Sum_probs=56.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++.+++++|.|+ |++|..+++.|...|. +|+++.|+.+.++.+.+.+    ++..+.+  .++   ++....+.    
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~----~g~~i~~--~~~---~dl~~al~----  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF----PDVEIIY--KPL---DEMLACAA----  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh----CCCceEe--ecH---hhHHHHHh----
Confidence            488999999999 9999999999999997 7999999998877765543    1222222  122   22333333    


Q ss_pred             cCCCccEEEEccccCCC
Q 020927          105 SGLPLNILINNAGIMAT  121 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~  121 (319)
                         ..|++|.+.+...+
T Consensus       329 ---~aDVVIsAT~s~~p  342 (519)
T PLN00203        329 ---EADVVFTSTSSETP  342 (519)
T ss_pred             ---cCCEEEEccCCCCC
Confidence               67999998875433

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.29  E-value=0.029  Score=51.67  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..|++++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +....   .|..+. ++.+    +.+.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~-~~~~----~~~~  232 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADKL---VNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcEE---ecCCcc-cHHH----Hhcc
Confidence            36899999986 8999999988888898 6889999987765432 22     32221   243332 2222    2222


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      .+.+|++|.++|
T Consensus       233 ~g~~D~vid~~G  244 (343)
T PRK09880        233 KGYFDVSFEVSG  244 (343)
T ss_pred             CCCCCEEEECCC
Confidence            346999999998

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.28  E-value=0.053  Score=52.50  Aligned_cols=79  Identities=15%  Similarity=0.099  Sum_probs=53.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ...+++++|+|.|+ |++|.++|+.|+++|++|++++++.. ......+.++..  +  +.++..+-..           
T Consensus        11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~-----------   74 (480)
T PRK01438         11 HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT-----------   74 (480)
T ss_pred             ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc-----------
Confidence            34578999999997 67999999999999999999986543 333333444332  2  4443332211           


Q ss_pred             HhcCCCccEEEEccccCC
Q 020927          103 KSSGLPLNILINNAGIMA  120 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~  120 (319)
                        ....+|.+|.++|+..
T Consensus        75 --~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 --LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             --ccCCCCEEEECCCcCC
Confidence              0126899999999753

>PLN02602 lactate dehydrogenase

Probab=96.27  E-value=0.08  Score=48.99  Aligned_cols=119  Identities=13%  Similarity=0.098  Sum_probs=75.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCC-ceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNA-KVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.|.|+|+ |.+|.++|..|+..+.  .+++++.+++.++.....+....+-. .. -+..+ .+.       ++    .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy-------~~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDY-------AV----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCH-------HH----h
Confidence            68999996 9999999999999885  69999999888777777766543211 12 22211 121       11    2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|..||....+. .+   -.+.+..    ...+++.+.+.+.+..    .++.+|+++.....
T Consensus       104 ~daDiVVitAG~~~k~g-~t---R~dll~~----N~~I~~~i~~~I~~~~----p~~ivivvtNPvdv  159 (350)
T PLN02602        104 AGSDLCIVTAGARQIPG-ES---RLNLLQR----NVALFRKIIPELAKYS----PDTILLIVSNPVDV  159 (350)
T ss_pred             CCCCEEEECCCCCCCcC-CC---HHHHHHH----HHHHHHHHHHHHHHHC----CCeEEEEecCchHH
Confidence            26899999999743321 11   1223333    3456666666666542    46788888875533

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.26  E-value=0.029  Score=47.72  Aligned_cols=40  Identities=23%  Similarity=0.298  Sum_probs=35.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      -.++++||.+||.|| |.+|...++.|.+.|++|++++++.
T Consensus         4 l~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          4 LMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            457899999999998 8899999999999999999998754

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.24  E-value=0.03  Score=52.69  Aligned_cols=81  Identities=21%  Similarity=0.321  Sum_probs=56.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+.+.+|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            57888999975 6999999999999998 78887531                   145666677777777777777776


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNA  116 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~na  116 (319)
                      ..+... ...++++       ..|++|.+.
T Consensus       119 ~~i~~~-~~~~~~~-------~~D~Vvd~~  140 (392)
T PRK07878        119 FRLDPS-NAVELFS-------QYDLILDGT  140 (392)
T ss_pred             ccCChh-HHHHHHh-------cCCEEEECC
Confidence            666542 2333332       456666544

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.21  E-value=0.031  Score=52.43  Aligned_cols=77  Identities=19%  Similarity=0.290  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++++||.|| |-+|.-+|++|+++|. +|+++.|+.++++++.+.+     +       ++....+++...+.   
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~-----~-------~~~~~l~el~~~l~---  237 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL-----G-------AEAVALEELLEALA---  237 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh-----C-------CeeecHHHHHHhhh---
Confidence            3489999999997 4699999999999996 7999999999998888766     2       23333334444444   


Q ss_pred             hcCCCccEEEEccccCCC
Q 020927          104 SSGLPLNILINNAGIMAT  121 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~  121 (319)
                          ..|++|.+.|...+
T Consensus       238 ----~~DvVissTsa~~~  251 (414)
T COG0373         238 ----EADVVISSTSAPHP  251 (414)
T ss_pred             ----hCCEEEEecCCCcc
Confidence                67999999986544

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.20  E-value=0.033  Score=50.17  Aligned_cols=79  Identities=18%  Similarity=0.302  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++++++|+|+++++|.+++..+...|.+|+.++++.+..+.+ ...     +.. .++  |.........+.. ... ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~~~~~~~~~-~~~-~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GAA-HVI--VTDEEDLVAEVLR-ITG-GK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EEE--ecCCccHHHHHHH-HhC-CC
Confidence            578999999999999999999999999999999987665544 221     211 222  2222222222222 211 22


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      .+|++++++|
T Consensus       213 ~~d~vi~~~~  222 (328)
T cd08268         213 GVDVVFDPVG  222 (328)
T ss_pred             CceEEEECCc
Confidence            6999999888

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02494 adenosylhomocysteinase

Probab=96.19  E-value=0.036  Score=52.86  Aligned_cols=41  Identities=17%  Similarity=0.302  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAAC   66 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~   66 (319)
                      ..+.||+++|.|.+ .||+.+|+.+...|++|+++++++...
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            44789999999977 899999999999999999999987653

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.18  E-value=0.038  Score=49.61  Aligned_cols=77  Identities=21%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC-------------------CHHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVR-------------------NMAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      +|||.| .||+|-++++.|+..|. ++.++|.                   ...+++.+.+.+.+.+|+.++..+..++.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            367777 67999999999999998 7888752                   22456666777777778888888877776


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      +.+  .+++       ..+|++|.+..
T Consensus        80 ~~~--~~f~-------~~fdvVi~alD   97 (291)
T cd01488          80 DKD--EEFY-------RQFNIIICGLD   97 (291)
T ss_pred             chh--HHHh-------cCCCEEEECCC
Confidence            532  2222       36788877543

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.17  E-value=0.02  Score=52.12  Aligned_cols=118  Identities=15%  Similarity=0.180  Sum_probs=70.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|.|+||+|.||.++|..|+..+.  .++++++++  ++.....+....+..++.....|    ++.       .+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~----~~~-------~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGE----EGL-------ENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCC----Cch-------HHHcCC
Confidence            378999999999999999999885  699999986  22222222221101111110000    011       112347


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .|++|..||....+.    ..-.+.+..|+-    +++...+.+.+..    .++.||++|...-
T Consensus        68 aDivvitaG~~~~~g----~~R~dll~~N~~----I~~~i~~~i~~~~----p~~iiivvsNPvD  120 (312)
T TIGR01772        68 ADVVVIPAGVPRKPG----MTRDDLFNVNAG----IVKDLVAAVAESC----PKAMILVITNPVN  120 (312)
T ss_pred             CCEEEEeCCCCCCCC----ccHHHHHHHhHH----HHHHHHHHHHHhC----CCeEEEEecCchh
Confidence            899999999743321    223344555554    6666666665542    4778899988774

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.13  E-value=0.3  Score=42.67  Aligned_cols=156  Identities=17%  Similarity=0.264  Sum_probs=95.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|-+|||--|.||+|..++..+-..|++++.+..+.++.+.+.+.      +.   .+.+|.+.++-++++.+ +- ...
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken------G~---~h~I~y~~eD~v~~V~k-iT-ngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN------GA---EHPIDYSTEDYVDEVKK-IT-NGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc------CC---cceeeccchhHHHHHHh-cc-CCC
Confidence            689999999999999999999999999999998887765544321      21   23356666655544332 21 123


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC--
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR--  185 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~--  185 (319)
                      ++|++.-..|.         +.+.               .-+..++       +.|.+|..+..++...   .+.|++  
T Consensus       215 GVd~vyDsvG~---------dt~~---------------~sl~~Lk-------~~G~mVSfG~asgl~~---p~~l~~ls  260 (336)
T KOG1197|consen  215 GVDAVYDSVGK---------DTFA---------------KSLAALK-------PMGKMVSFGNASGLID---PIPLNQLS  260 (336)
T ss_pred             Cceeeeccccc---------hhhH---------------HHHHHhc-------cCceEEEeccccCCCC---CeehhhcC
Confidence            68988888774         1111               1122333       2678888776665542   222222  


Q ss_pred             ---CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 020927          186 ---INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHP  230 (319)
Q Consensus       186 ---~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~P  230 (319)
                         +++.+.  ....|-....-+..+...+-..+.....+++++.+.|
T Consensus       261 ~k~l~lvrp--sl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp  306 (336)
T KOG1197|consen  261 PKALQLVRP--SLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP  306 (336)
T ss_pred             hhhhhhccH--hhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence               233322  2445666666666666555555555555677776665

>PRK14852 hypothetical protein; Provisional

Probab=96.12  E-value=0.033  Score=57.52  Aligned_cols=83  Identities=12%  Similarity=0.201  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC-------------------CHHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVR-------------------NMAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r-------------------~~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +|++.+|+|.| .||+|..+++.|+..|. ++.+++-                   ...+++...+.+.+.+|..++..+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            46788999998 67999999999999997 7888752                   224666777777778888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...++. +.+.++++       ++|++|.+..
T Consensus       408 ~~~I~~-en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        408 PEGVAA-ETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             ecCCCH-HHHHHHhh-------CCCEEEECCC
Confidence            777643 45555544       5677776443

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.10  E-value=0.027  Score=58.82  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=61.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-E-------------EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-H-------------VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~-------------Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      -+.|.|+|.|| |.||+.+++.|++... .             |++++++.+.++++.+..      .++..+.+|++|.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~  639 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDS  639 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCH
Confidence            35778999997 9999999999998642 3             888899987776655432      2467889999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~  118 (319)
                      +++.++++       .+|+||++...
T Consensus       640 e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        640 ESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHHhhc-------CCCEEEECCCc
Confidence            88777666       58999999875

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.10  E-value=0.095  Score=47.63  Aligned_cols=118  Identities=15%  Similarity=0.139  Sum_probs=77.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--C-CceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           32 AIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--N-AKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~-~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |.|.|+ |.+|..+|..|+.++.  .+++++.+++.++.....+....+  . .++.....|          .+++    
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~----------y~~~----   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD----------YDDC----   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC----------HHHh----
Confidence            678898 9999999999999885  699999998887777777765432  1 233333333          1222    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|..||....+. .+.+ -.+.++.    ...+++.+.+.+.+.+    .++.+|++|...-.
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~----N~~I~~~i~~~i~~~~----p~~i~ivvsNPvDv  124 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQT----NAKIIREIMGNITKVT----KEAVIILITNPLDI  124 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHH----HHHHHHHHHHHHHHhC----CCeEEEEecCcHHH
Confidence            36799999999743321 1110 1233333    3557777778777653    46788888876544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.10  E-value=0.068  Score=48.89  Aligned_cols=121  Identities=12%  Similarity=0.044  Sum_probs=72.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.++|.|+|| |.+|..++..++..| ..|++++++++.++.....+....+  +..... .. -.+   .+ .+     
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~-~~d---~~-~l-----   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LG-TNN---YE-DI-----   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-Ee-CCC---HH-Hh-----
Confidence            5678999997 889999999999999 5899999987665432222222111  111111 11 112   22 11     


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                        ...|++|.++|....+.    ..-.+.+..|.    .+.+.+.+.+.+..    +++.+|++|.....
T Consensus        72 --~~ADiVVitag~~~~~g----~~r~dll~~n~----~i~~~i~~~i~~~~----p~a~vivvsNP~di  127 (319)
T PTZ00117         72 --KDSDVVVITAGVQRKEE----MTREDLLTING----KIMKSVAESVKKYC----PNAFVICVTNPLDC  127 (319)
T ss_pred             --CCCCEEEECCCCCCCCC----CCHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecChHHH
Confidence              26799999999643321    11234444554    46666666666542    35668888876533

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.07  E-value=0.037  Score=52.99  Aligned_cols=78  Identities=14%  Similarity=0.123  Sum_probs=59.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...+.      ...+.++..|.++++.++++-      .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE------LPNTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcC------C
Confidence            45688999998 9999999999999999999999998776654432      234667889999987765441      2


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      .+.|.+|...+
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            36788876655

>PRK07877 hypothetical protein; Provisional

Probab=95.98  E-value=0.042  Score=55.43  Aligned_cols=82  Identities=21%  Similarity=0.255  Sum_probs=63.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeC------------------CHHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVR------------------NMAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r------------------~~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      .|++.+|+|.|+ | +|..++..|+..|.  ++++++.                  ...+.+.+.+.+.+.+|..++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            378899999999 4 99999999999994  7888763                  224667777788888888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...++ ++.+.+++.       .+|++|.+.-
T Consensus       182 ~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             eccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            88887 456666654       5688876653

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.98  E-value=0.056  Score=49.12  Aligned_cols=117  Identities=19%  Similarity=0.154  Sum_probs=69.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|.|+|++|.+|.++|..|+.+|.  .+++++.+  .++.....+.+..+...+.....    .+++       .+.+..
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~----~~~~-------y~~~~d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLG----PEEL-------KKALKG   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecC----CCch-------HHhcCC
Confidence            689999999999999999999984  79999998  33433333333211111111101    0111       112337


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .|++|.+||....+.    +.-.+.++.|.-    +++...+.+.+..    .++.+|++|...
T Consensus        69 aDivvitaG~~~k~g----~tR~dll~~N~~----i~~~i~~~i~~~~----p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRKPG----MTRDDLFNINAG----IVRDLATAVAKAC----PKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhC----CCeEEEEccCch
Confidence            899999999743321    223344555544    4455555554432    467899998876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.94  E-value=0.083  Score=50.52  Aligned_cols=39  Identities=28%  Similarity=0.456  Sum_probs=34.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      ++.|.||+|++|.++++.|.+.|.+|++++|+++...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999998765443

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.94  E-value=0.083  Score=47.04  Aligned_cols=162  Identities=18%  Similarity=0.178  Sum_probs=98.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +|+|++|+||+|.+|. ++=+||+ .|.+||...-+.++..-+..+.    +...    ..|.-++.++.++++....  
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~----G~d~----afNYK~e~~~~~aL~r~~P--  221 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKF----GFDD----AFNYKEESDLSAALKRCFP--  221 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhcc----CCcc----ceeccCccCHHHHHHHhCC--
Confidence            6799999999999997 5556666 4789998888887765544332    1111    2244455455555555322  


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      ..||+.+-|.|-                        .++.+.+..|+.       +|||+.-+-++.+.. +.       
T Consensus       222 ~GIDiYfeNVGG------------------------~~lDavl~nM~~-------~gri~~CG~ISqYN~-~~-------  262 (343)
T KOG1196|consen  222 EGIDIYFENVGG------------------------KMLDAVLLNMNL-------HGRIAVCGMISQYNL-EN-------  262 (343)
T ss_pred             CcceEEEeccCc------------------------HHHHHHHHhhhh-------ccceEeeeeehhccc-cC-------
Confidence            279999999994                        366777777865       789999887665531 11       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-hHHHHHHHHhhhhcCCHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                             +   +...         .+....-+ .  +++    -|+.-++.....+ +++.+.+++..+...-.|++++.
T Consensus       263 -------~---~~~~---------~l~~ii~K-r--~~i----qgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~G  316 (343)
T KOG1196|consen  263 -------P---EGLH---------NLSTIIYK-R--IRI----QGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADG  316 (343)
T ss_pred             -------C---cccc---------chhhheee-e--EEe----eeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHH
Confidence                   0   1110         11111111 1  444    3466666555553 34556666777766667777766

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.93  E-value=0.041  Score=42.89  Aligned_cols=76  Identities=17%  Similarity=0.210  Sum_probs=54.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHH-CCCEEEE-EeCCH----------------------HHHHHHHHHHHhhCCCCceEEEE
Q 020927           31 TAIVTGASSGIGTETARVLAL-RGVHVVM-AVRNM----------------------AACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~-~G~~Vv~-~~r~~----------------------~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      +|+|.|++|-+|+++++.+.+ .+.+++. ++|+.                      +.+++..+.          .=+.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----------~DVv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----------ADVV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----------CCEE
Confidence            589999999999999999999 5667554 46665                      223332221          1156


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEcccc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~  118 (319)
                      +|++.++.+...++...+.  ++.+++-..|.
T Consensus        72 IDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            7999999999998888776  78899999995

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.85  E-value=0.035  Score=52.20  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=55.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++-+|||.|| ||||-++.|.|+..|+ +|++++-+.-.+..+         +-++.|-+-|+.+.....  ..++..+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNL---------NRQFLFrkkhVgqsKA~v--A~~~v~~   77 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNL---------NRQFLFRKKHVGQSKATV--AAKAVKQ   77 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccch---------hhhheeehhhcCchHHHH--HHHHHHH
Confidence            35677899986 6899999999999998 699998655333322         223556666776665533  3333334


Q ss_pred             C-CCccEEEEccccCCC
Q 020927          106 G-LPLNILINNAGIMAT  121 (319)
Q Consensus       106 ~-~~id~lv~nag~~~~  121 (319)
                      | .+++++-.++.++.+
T Consensus        78 Fnpn~~l~~yhanI~e~   94 (603)
T KOG2013|consen   78 FNPNIKLVPYHANIKEP   94 (603)
T ss_pred             hCCCCceEeccccccCc
Confidence            3 367777777776544

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.81  E-value=0.034  Score=43.56  Aligned_cols=90  Identities=21%  Similarity=0.235  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhC---C---CCceEEEEcCCCCHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEI---P---NAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~---~---~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ...++-|.|+ |.+|.++++.|.+.|+.|..+ +|+....++....+....   .   -.+...+-+-+.|. .+..+++
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~   86 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAE   86 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHH
Confidence            3457889998 889999999999999998776 577766666555442110   0   01223333344443 7888888


Q ss_pred             HHHhc--CCCccEEEEccccC
Q 020927          101 EFKSS--GLPLNILINNAGIM  119 (319)
Q Consensus       101 ~i~~~--~~~id~lv~nag~~  119 (319)
                      ++...  ..+=.++||++|..
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS-
T ss_pred             HHHHhccCCCCcEEEECCCCC
Confidence            88765  33346899999964

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.78  E-value=0.15  Score=48.55  Aligned_cols=117  Identities=14%  Similarity=0.066  Sum_probs=77.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-------CC--EEEEEeCCHHHHHHHHHHHHhhC-CC-CceEEEEcCCCCHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALR-------GV--HVVMAVRNMAACREVKKAIVKEI-PN-AKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~-------G~--~Vv~~~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~v~~~   98 (319)
                      -.|.|+||+|.+|.+++..|+..       |.  ++++.+++++.++....++.... +- .++.. ..|  +.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--PYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--CHH-----
Confidence            45999999999999999999998       74  79999999999888777776643 21 12211 111  211     


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhc-ccccCCCCCeEEEeCCcc
Q 020927           99 ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGK-TARESSKEGRIVNVSSRR  172 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~~~~~ii~isS~~  172 (319)
                            .+...|++|..||....+.    +.-.+.++.|    ..+++...+.+.+ .    ..++.||++|...
T Consensus       173 ------~~kdaDiVVitAG~prkpG----~tR~dLl~~N----~~I~k~i~~~I~~~a----~p~~ivIVVsNPv  229 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPRGPG----MERADLLDIN----GQIFAEQGKALNEVA----SRNVKVIVVGNPC  229 (444)
T ss_pred             ------HhCcCCEEEECCCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHhc----CCCeEEEEcCCcH
Confidence                  1237899999999743221    1223344444    4466666666655 2    2477888888755

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.77  E-value=0.048  Score=52.12  Aligned_cols=42  Identities=24%  Similarity=0.280  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAAC   66 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~   66 (319)
                      ...+.||+++|.|.+ .||+++|+.|...|++|+++++++...
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            357899999999977 599999999999999999998886554

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.76  E-value=0.064  Score=48.48  Aligned_cols=79  Identities=24%  Similarity=0.341  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+.+++|+|+++++|.+++..+...|.+|+.++++.+..+.+ +.+     +... +  .|..+.+..+.+.+..  ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-~--~~~~~~~~~~~~~~~~--~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GADV-A--VDYTRPDWPDQVREAL--GGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCCE-E--EecCCccHHHHHHHHc--CCC
Confidence            578999999999999999999999999999999988765543 222     2211 1  2333433333332211  122


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999887

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.75  E-value=0.04  Score=51.56  Aligned_cols=38  Identities=26%  Similarity=0.294  Sum_probs=32.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAA   65 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~   65 (319)
                      ..++|.|.||||-+|.++++.|+++ ..+|.++.++.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            4568999999999999999999999 5689998886543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.75  E-value=0.034  Score=46.37  Aligned_cols=44  Identities=27%  Similarity=0.345  Sum_probs=37.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK   75 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~   75 (319)
                      +|.|.|| |-+|.+||..++..|++|++.+++++.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999999988877777654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.72  E-value=0.0061  Score=52.04  Aligned_cols=76  Identities=11%  Similarity=0.104  Sum_probs=51.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      -.++++||.+||.|| |.+|..-++.|++.|++|++++.+.. .++.    +..   ..++.++.-+.... .    +  
T Consensus         3 ~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~----l~~---~~~i~~~~~~~~~~-d----l--   67 (205)
T TIGR01470         3 VFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTL----LAE---QGGITWLARCFDAD-I----L--   67 (205)
T ss_pred             eEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHH----HHH---cCCEEEEeCCCCHH-H----h--
Confidence            346799999999986 56889999999999999999987543 2222    222   23677777766532 1    1  


Q ss_pred             HHhcCCCccEEEEcccc
Q 020927          102 FKSSGLPLNILINNAGI  118 (319)
Q Consensus       102 i~~~~~~id~lv~nag~  118 (319)
                           ...+.+|.+.+.
T Consensus        68 -----~~~~lVi~at~d   79 (205)
T TIGR01470        68 -----EGAFLVIAATDD   79 (205)
T ss_pred             -----CCcEEEEECCCC
Confidence                 245677766663

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.66  E-value=0.092  Score=48.23  Aligned_cols=90  Identities=13%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhhCCCCceEEEEcCCCCHHHHHHHH-H
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK---KAIVKEIPNAKVQAMELDLSSLASVRKFA-S  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~---~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~-~  100 (319)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.+|+++......   ..+........+..+.+-++..  ...++ +
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~--t~~li~~  218 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE--SYHLFDK  218 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH--HHHHHhH
Confidence            4689999999976 67999999999999999999999875433211   1222233355677777776653  22222 2


Q ss_pred             HHHhcCCCccEEEEcccc
Q 020927          101 EFKSSGLPLNILINNAGI  118 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~  118 (319)
                      ++.... +.+.++.|+|.
T Consensus       219 ~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        219 AMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHHhcC-CCCcEEEEcCC
Confidence            333222 45667777764

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.65  E-value=0.2  Score=45.79  Aligned_cols=124  Identities=15%  Similarity=0.154  Sum_probs=72.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhh--CCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKE--IPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.++|.|.|| |.+|.+++..++..|. .|++++++++.+......+...  ..+........  ++.+       .   
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~-------~---   71 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYE-------D---   71 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHH-------H---
Confidence            4578999995 7799999999999995 8999999887643222222211  11112222210  1211       1   


Q ss_pred             cCCCccEEEEccccCCCCcccCcc--cccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKD--NIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~--~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                       ....|++|.++|....+.. +.-  .-.+.+..|    ..+.+.+.+.+.+..    .++.+|++|.....
T Consensus        72 -l~~aDiVI~tag~~~~~~~-~~~~~~r~~~l~~n----~~i~~~i~~~i~~~~----p~a~~iv~sNP~di  133 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRPGK-SDKEWNRDDLLPLN----AKIMDEVAEGIKKYC----PNAFVIVITNPLDV  133 (321)
T ss_pred             -hCCCCEEEECCCCCCCCCC-CcCCCCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcHHH
Confidence             1267999999997543221 100  112333444    446677777776542    35578888876643

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.65  E-value=0.089  Score=48.19  Aligned_cols=78  Identities=21%  Similarity=0.233  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+++|+|+ |++|..++..+...|++ |+++++++++.+.+ +++     +..   ..+|..+.+ .+++. ++.. .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~---~~i~~~~~~-~~~~~-~~~~-~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD---FVINSGQDD-VQEIR-ELTS-G  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC---EEEcCCcch-HHHHH-HHhC-C
Confidence            5899999986 89999999988889997 99999988765543 322     321   123444433 33322 2211 1


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            269999999883

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.63  E-value=0.03  Score=44.63  Aligned_cols=40  Identities=23%  Similarity=0.278  Sum_probs=36.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..+++||.++|.|.+.-+|+.++..|.++|++|.++.++.
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            4679999999999999999999999999999999998654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.60  E-value=0.12  Score=48.22  Aligned_cols=79  Identities=16%  Similarity=0.146  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.++||+|+ ++||...+..+...|+ +|+.+++++++.+.+ +++     +...   .+|..+ .+++.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~---~i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD---CVNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe---EEcccccchhHHHHHHHHhC-
Confidence            5889999985 8999999888888898 799999988776644 222     3221   223332 2233333333322 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +.+|++|.++|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.60  E-value=0.17  Score=41.31  Aligned_cols=87  Identities=17%  Similarity=0.150  Sum_probs=54.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CCceEEEEcCCCCHHHHHHHHHH--H
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-----NAKVQAMELDLSSLASVRKFASE--F  102 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~v~~~~~~--i  102 (319)
                      ++|-+.|- |-+|.++++.|++.|++|++.+|++++.+++.+.-.....     -.....+-.=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35677776 7999999999999999999999999888776643110000     01234444557777778888776  5


Q ss_pred             HhcCCCccEEEEccc
Q 020927          103 KSSGLPLNILINNAG  117 (319)
Q Consensus       103 ~~~~~~id~lv~nag  117 (319)
                      .....+=.++|.+.-
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            554433344444443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.58  E-value=0.05  Score=47.18  Aligned_cols=37  Identities=22%  Similarity=0.355  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCC
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRN   62 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~   62 (319)
                      .++++++++|.|| |+.|+++++.|++.|.   +|.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4688999999998 8999999999999996   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05442 malate dehydrogenase; Provisional

Probab=95.55  E-value=0.04  Score=50.48  Aligned_cols=119  Identities=14%  Similarity=0.045  Sum_probs=70.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCHH--HHHHHHHHHHhhC-CC-CceEEEEcCCCCHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNMA--ACREVKKAIVKEI-PN-AKVQAMELDLSSLASVRK   97 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~v~~   97 (319)
                      .+.|.|+||+|.+|..++..|+..|.       .+++.++++.  .++.....+.+.. +. ..+.. ..  .+      
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~------   74 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DP------   74 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--Ch------
Confidence            35799999999999999999998773       6999998543  3443333333321 11 11111 11  11      


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                           .+.+...|++|..||....+    .+.-.+.++.|    ..+++.+.+.+.+..   ...+.+|++|...
T Consensus        75 -----y~~~~daDiVVitaG~~~k~----g~tR~dll~~N----a~i~~~i~~~i~~~~---~~~~iiivvsNPv  133 (326)
T PRK05442         75 -----NVAFKDADVALLVGARPRGP----GMERKDLLEAN----GAIFTAQGKALNEVA---ARDVKVLVVGNPA  133 (326)
T ss_pred             -----HHHhCCCCEEEEeCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHHhC---CCCeEEEEeCCch
Confidence                 11233789999999974322    12233344444    456677777766532   1367888888654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.51  E-value=0.19  Score=45.75  Aligned_cols=119  Identities=12%  Similarity=0.025  Sum_probs=75.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCc-eEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAK-VQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..|.|+|+ |.+|..+|..|+..|.  .+++++++++.++.....+....+-.. ......  .+.+       +    +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----h
Confidence            47899996 9999999999999884  699999998877777777765432111 122211  1211       1    1


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|.+||....+. .+   -.+.+..    ...+++.+.+.+.+..    .++.+|++|.....
T Consensus        70 ~~adivvitaG~~~k~g-~~---R~dll~~----N~~i~~~~~~~i~~~~----p~~~vivvsNP~d~  125 (312)
T cd05293          70 ANSKVVIVTAGARQNEG-ES---RLDLVQR----NVDIFKGIIPKLVKYS----PNAILLVVSNPVDI  125 (312)
T ss_pred             CCCCEEEECCCCCCCCC-CC---HHHHHHH----HHHHHHHHHHHHHHhC----CCcEEEEccChHHH
Confidence            26799999999753321 11   1223333    3456666666666542    47788888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.48  E-value=0.12  Score=48.15  Aligned_cols=78  Identities=14%  Similarity=0.135  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~  105 (319)
                      .|.++||.|+ ++||...+..+...|+ +|+.+++++++.+.+ +.+     +...   .+|..+. +++.+.+.++.. 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~---~i~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD---CVNPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE---EEcccccchHHHHHHHHHhC-
Confidence            5899999975 8999999999888999 699999998876543 222     3221   1344433 234444444432 


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                       +++|++|.++|
T Consensus       255 -~g~d~vid~~g  265 (368)
T cd08300         255 -GGVDYTFECIG  265 (368)
T ss_pred             -CCCcEEEECCC
Confidence             37999999888

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.47  E-value=0.073  Score=48.36  Aligned_cols=78  Identities=18%  Similarity=0.302  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.+++|.||++++|.+++......|.+|+.++++++..+.. ..+     +.. .++  |..+. +....+....  .+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v~--~~~~~-~~~~~~~~~~--~~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RPI--NYKTE-DLGEVLKKEY--PK  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eEE--eCCCc-cHHHHHHHhc--CC
Confidence            678999999999999999998888999999999887665443 222     221 122  22222 2222222222  23


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      .+|.+|++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899998877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.47  E-value=0.066  Score=38.74  Aligned_cols=36  Identities=36%  Similarity=0.469  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeC
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVR   61 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r   61 (319)
                      .++++++++|.|+ |++|+.++..|.+.+ .+|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5688999999999 999999999999995 57888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.46  E-value=0.064  Score=48.52  Aligned_cols=79  Identities=23%  Similarity=0.350  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+++|.||++++|.+++......|++|+.+.++.+..+.+.+ +     +.. .++  +..+.+..+. +.+... ..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~~~~~~~-i~~~~~-~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQPGWQDK-VREAAG-GA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCCchHHHH-HHHHhC-CC
Confidence            57899999999999999999999999999999888766544432 1     221 111  2233222222 222211 12


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.++|
T Consensus       208 ~~d~v~d~~g  217 (324)
T cd08292         208 PISVALDSVG  217 (324)
T ss_pred             CCcEEEECCC
Confidence            6999999888

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.46  E-value=0.062  Score=48.28  Aligned_cols=56  Identities=20%  Similarity=0.334  Sum_probs=38.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH---------------------HHHHHHHHHHHhhCCCCceEEEEcC
Q 020927           32 AIVTGASSGIGTETARVLALRGV-HVVMAVRNM---------------------AACREVKKAIVKEIPNAKVQAMELD   88 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~~~~v~~~~~D   88 (319)
                      |+|.|+ ||+|..+|+.|+..|. ++++++.+.                     .+++.+.+.+++.+|..++..+...
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~   79 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLS   79 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeee
Confidence            677765 6999999999999998 788876321                     2344555555566666665555443

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.42  E-value=0.1  Score=47.80  Aligned_cols=118  Identities=14%  Similarity=0.056  Sum_probs=71.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhC-CCC-ceEEEEcCCCCHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEI-PNA-KVQAMELDLSSLASVRKF   98 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~-~~~-~v~~~~~Dl~~~~~v~~~   98 (319)
                      -.|.|+||+|++|..++..|+..|.       .+++.++++  +.++.....+.+.. +.. .+. +..  .+       
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~-------   73 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DP-------   73 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--Ch-------
Confidence            4689999999999999999998884       699999965  43555555554432 111 111 110  11       


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           99 ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .+    .....|++|..||....+    .+.-.+.++.|    ..+++.+.+.+.+.+.   +++.+|++|...
T Consensus        74 ~~----~~~daDvVVitAG~~~k~----g~tR~dll~~N----a~i~~~i~~~i~~~~~---~~~iiivvsNPv  132 (323)
T TIGR01759        74 EE----AFKDVDAALLVGAFPRKP----GMERADLLSKN----GKIFKEQGKALNKVAK---KDVKVLVVGNPA  132 (323)
T ss_pred             HH----HhCCCCEEEEeCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHhhCC---CCeEEEEeCCcH
Confidence            11    123679999999974322    12223344444    4566666666665421   267888888654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.41  E-value=0.045  Score=48.94  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=35.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~   62 (319)
                      ..+++||.++|+|++.-+|+.++..|.++|++|.++.+.
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            357899999999999999999999999999999998765

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.41  E-value=0.06  Score=53.15  Aligned_cols=61  Identities=25%  Similarity=0.368  Sum_probs=46.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhCCCCceE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN----------------------MAACREVKKAIVKEIPNAKVQ   83 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~----------------------~~~~~~~~~~~~~~~~~~~v~   83 (319)
                      +++.+|||.|+ ||+|..+++.|+..|. ++++++.+                      ..+++.+.+.+++.+|+.++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            57888999985 7899999999999998 78888631                      234555666777777777777


Q ss_pred             EEEcC
Q 020927           84 AMELD   88 (319)
Q Consensus        84 ~~~~D   88 (319)
                      .+...
T Consensus       415 ~~~~~  419 (664)
T TIGR01381       415 GHRLT  419 (664)
T ss_pred             Eeeee
Confidence            66655

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.40  E-value=0.071  Score=47.81  Aligned_cols=42  Identities=24%  Similarity=0.361  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      +|.+++|+|+++++|.+++..+...|.+|+.++++.+..+..
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.40  E-value=0.1  Score=46.84  Aligned_cols=62  Identities=19%  Similarity=0.257  Sum_probs=46.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +|.+.+|||.|+ +|+|.++|+.|+..|. +|.+++.+                   ..+++.+.+.+.+.+|..++..+
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            467888999975 6999999999999998 68888632                   24556666677777777677666


Q ss_pred             EcC
Q 020927           86 ELD   88 (319)
Q Consensus        86 ~~D   88 (319)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.39  E-value=0.072  Score=49.04  Aligned_cols=39  Identities=26%  Similarity=0.229  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      ..+.||++.|.|- |.||+++|+.|...|++|++.+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            5789999999997 89999999999999999999998754

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.38  E-value=0.6  Score=38.61  Aligned_cols=76  Identities=17%  Similarity=0.166  Sum_probs=55.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+++++|=.|++.|.   ++..+++.|.+|+.++.+++.++.+.+.+...  +.++.++..|+.+..            .
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~   80 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------R   80 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------C
Confidence            456788889888774   45667777779999999998888777666543  446788888876521            1


Q ss_pred             CCccEEEEccccC
Q 020927          107 LPLNILINNAGIM  119 (319)
Q Consensus       107 ~~id~lv~nag~~  119 (319)
                      +.+|+++.|....
T Consensus        81 ~~fD~Vi~n~p~~   93 (179)
T TIGR00537        81 GKFDVILFNPPYL   93 (179)
T ss_pred             CcccEEEECCCCC
Confidence            3789999997653

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.36  E-value=0.13  Score=46.15  Aligned_cols=42  Identities=19%  Similarity=0.317  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.+++|.|+++++|.+++......|++|+.++++++..+..
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999887665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.36  E-value=0.1  Score=47.31  Aligned_cols=120  Identities=17%  Similarity=0.187  Sum_probs=74.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCC-ceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNA-KVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.|.|+|| |+||.+++..|+.++.  .+++.+++++.++.....+.+..+.. .-..+..| .+.++           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            46889999 9999999999988874  79999999776666555554432211 11222222 22111           2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|..||....+. .   .-.+.+..|.    .+.+.+.+.+.+.+    .++.++++|...-.
T Consensus        68 ~~aDiVvitAG~prKpG-m---tR~DLl~~Na----~I~~~i~~~i~~~~----~d~ivlVvtNPvD~  123 (313)
T COG0039          68 KGADIVVITAGVPRKPG-M---TRLDLLEKNA----KIVKDIAKAIAKYA----PDAIVLVVTNPVDI  123 (313)
T ss_pred             cCCCEEEEeCCCCCCCC-C---CHHHHHHhhH----HHHHHHHHHHHhhC----CCeEEEEecCcHHH
Confidence            37899999999754432 1   1233444443    35555555555442    36788888876643

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.35  E-value=0.075  Score=48.18  Aligned_cols=42  Identities=29%  Similarity=0.389  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .+.+++|.|+++++|.+++..+...|++|+.+++++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            467999999999999999999999999999999988765544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.33  E-value=0.2  Score=47.21  Aligned_cols=41  Identities=20%  Similarity=0.138  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAAC   66 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~   66 (319)
                      ..+.|++++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus       191 ~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~  231 (406)
T TIGR00936       191 LLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRA  231 (406)
T ss_pred             CCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence            458999999999 46699999999999999999999988654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02740 Alcohol dehydrogenase-like

Probab=95.29  E-value=0.12  Score=48.32  Aligned_cols=79  Identities=15%  Similarity=0.154  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~  105 (319)
                      .|.++||.|+ |+||..++..+...|+ +|+++++++++.+.+. .+     +... +  +|..+. +...+.+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~-~--i~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD-F--INPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhC-
Confidence            5889999986 8999999998888998 6999999887766542 22     3221 2  233332 123333333322 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +.+|++|.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999983

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.21  E-value=0.081  Score=47.29  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      +|.+++|.|+++++|.+++..+...|++|+.++++++..+..
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            689999999999999999999999999999999887765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.20  E-value=0.19  Score=45.62  Aligned_cols=42  Identities=17%  Similarity=0.341  Sum_probs=36.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.+++|.|+++++|.+++..+...|.+++++.++++..+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999988888887665544

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.17  E-value=0.15  Score=48.23  Aligned_cols=89  Identities=9%  Similarity=0.113  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .|.+++|.||+|++|...+..+...|.   +|+++++++++.+...+................|..+.++..+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            468999999999999998776666543   79999999887765443211000000111122344332233333333321


Q ss_pred             cCCCccEEEEccc
Q 020927          105 SGLPLNILINNAG  117 (319)
Q Consensus       105 ~~~~id~lv~nag  117 (319)
                       ...+|++|.++|
T Consensus       255 -g~g~D~vid~~g  266 (410)
T cd08238         255 -GQGFDDVFVFVP  266 (410)
T ss_pred             -CCCCCEEEEcCC
Confidence             226899998877

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.16  E-value=0.15  Score=46.00  Aligned_cols=79  Identities=23%  Similarity=0.295  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+++|.|+++++|.+++..+...|.+|+++.++.+..+.. +.+     +..   ...|..+.+...++. +.. ...
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~-~~~-~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD---EVIDSSPEDLAQRVK-EAT-GGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC---EEecccchhHHHHHH-HHh-cCC
Confidence            578999999999999999999999999999998887664433 222     211   112333322232222 221 123


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6899998887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.15  E-value=0.058  Score=48.11  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=37.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKA   72 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~   72 (319)
                      +++++|.|| ||-+++++..|++.|. +|.++.|+.++.+.+.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            578999996 8999999999999997 699999999887766553

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.14  E-value=0.045  Score=43.96  Aligned_cols=40  Identities=30%  Similarity=0.408  Sum_probs=33.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~   73 (319)
                      |+.+|+++-+|++||..|.++|.+|+++  +.+..+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5889999999999999999999999999  555555555444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.14  E-value=0.018  Score=43.37  Aligned_cols=38  Identities=24%  Similarity=0.402  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ++++||.+||.|| |.+|..=++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            6789999999998 8999999999999999999999886

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.13  E-value=0.31  Score=45.67  Aligned_cols=119  Identities=15%  Similarity=0.051  Sum_probs=74.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-E------EEEE--eCCHHHHHHHHHHHHhhC-CCC-ceEEEEcCCCCHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-H------VVMA--VRNMAACREVKKAIVKEI-PNA-KVQAMELDLSSLASVRK   97 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~------Vv~~--~r~~~~~~~~~~~~~~~~-~~~-~v~~~~~Dl~~~~~v~~   97 (319)
                      .-.|.|+||+|.+|..+|..|+..|. .      ++++  +++++.++....++.... +-. ++.. ..  .+.     
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y-----  115 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPY-----  115 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCH-----
Confidence            45799999999999999999999874 3      4444  889988887777776543 221 2211 11  111     


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                        +.    +...|++|..||....+.    +.-.+.++.|    ..+++...+.+.+..   ++.+.||++|...
T Consensus       116 --~~----~kdaDIVVitAG~prkpg----~tR~dll~~N----~~I~k~i~~~I~~~a---~~~~iviVVsNPv  173 (387)
T TIGR01757       116 --EV----FEDADWALLIGAKPRGPG----MERADLLDIN----GQIFADQGKALNAVA---SKNCKVLVVGNPC  173 (387)
T ss_pred             --HH----hCCCCEEEECCCCCCCCC----CCHHHHHHHH----HHHHHHHHHHHHHhC---CCCeEEEEcCCcH
Confidence              11    236899999999743321    1223344444    456666666665532   2467888888755

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.07  E-value=0.11  Score=43.70  Aligned_cols=39  Identities=26%  Similarity=0.133  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+++||.|+|.|-|.-+|+-++..|+++|++|.+++.+.
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~   96 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDING   96 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCc
Confidence            379999999999999999999999999999999997653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.06  E-value=0.2  Score=46.62  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~  105 (319)
                      .|.++||.|+ +++|...+..+...|+ +|+++++++++.+.+ +.+     +.. .+  .|..+. +++.+.+.++.. 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~--i~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EF--VNPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eE--EcccccchhHHHHHHHHhC-
Confidence            5889999985 8999999888888898 799999998765543 222     321 11  233321 234444444432 


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                       +.+|++|.+.|
T Consensus       256 -~~~d~vid~~G  266 (369)
T cd08301         256 -GGVDYSFECTG  266 (369)
T ss_pred             -CCCCEEEECCC
Confidence             26999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.06  E-value=0.25  Score=37.47  Aligned_cols=114  Identities=13%  Similarity=0.095  Sum_probs=66.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      |.+||--|+++|.=   +..+++.+ .+++.++.++..++-....+.......++.++..|+.+..      +.+  ..+
T Consensus         1 g~~vlD~~~G~G~~---~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~--~~~   69 (117)
T PF13659_consen    1 GDRVLDPGCGSGTF---LLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EPL--PDG   69 (117)
T ss_dssp             TEEEEEETSTTCHH---HHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HTC--TTT
T ss_pred             CCEEEEcCcchHHH---HHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hhc--cCc
Confidence            45677777776552   23333445 7999999999988877766665433457899999875431      111  235


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      ++|++|.|.-+......  ......       ....+++.+.+.++.       +|.+++++
T Consensus        70 ~~D~Iv~npP~~~~~~~--~~~~~~-------~~~~~~~~~~~~L~~-------gG~~~~~~  115 (117)
T PF13659_consen   70 KFDLIVTNPPYGPRSGD--KAALRR-------LYSRFLEAAARLLKP-------GGVLVFIT  115 (117)
T ss_dssp             -EEEEEE--STTSBTT------GGC-------HHHHHHHHHHHHEEE-------EEEEEEEE
T ss_pred             eeEEEEECCCCcccccc--chhhHH-------HHHHHHHHHHHHcCC-------CeEEEEEe
Confidence            89999999987533111  111111       333556666666654       56776654

...

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=95.00  E-value=0.14  Score=44.68  Aligned_cols=122  Identities=12%  Similarity=0.130  Sum_probs=76.0

Q ss_pred             CCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .++||=.|++ |.+|..++.+.-+  ++|+++.+.+...+-+.+.+....-..++.++..|+.+.....        .+.
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~--------~~~  114 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKAL--------VFA  114 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcc--------ccc
Confidence            6667777777 6667766665444  7999999999888877777765333568999998877643211        123


Q ss_pred             CccEEEEccccCCCCcccCccccc----chhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIE----LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~----~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                      ++|.+|+|..+.......+.+...    .+...++-.-+   +.+...++       .+|++.+|..
T Consensus       115 ~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i---~~a~~~lk-------~~G~l~~V~r  171 (248)
T COG4123         115 SFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLI---RAAAKLLK-------PGGRLAFVHR  171 (248)
T ss_pred             ccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHH---HHHHHHcc-------CCCEEEEEec
Confidence            689999999987664432333332    23333333333   33333333       2678777765

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.99  E-value=0.46  Score=43.05  Aligned_cols=117  Identities=15%  Similarity=0.140  Sum_probs=73.5

Q ss_pred             EEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           32 AIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +.|.|+ |++|.+++..|+..|  .++++++++++.++.....+....+. ........  .+.       +.    ...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~~----l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------AD----AAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------HH----hCC
Confidence            457887 579999999999999  47999999988888777777654322 11122111  111       11    126


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .|++|.++|....+.    +.-...+..    ...+++.+.+.+.+..    .++.+|++|.....
T Consensus        67 aDiVIitag~p~~~~----~~R~~l~~~----n~~i~~~~~~~i~~~~----p~~~viv~sNP~d~  120 (300)
T cd00300          67 ADIVVITAGAPRKPG----ETRLDLINR----NAPILRSVITNLKKYG----PDAIILVVSNPVDI  120 (300)
T ss_pred             CCEEEEcCCCCCCCC----CCHHHHHHH----HHHHHHHHHHHHHHhC----CCeEEEEccChHHH
Confidence            899999999743221    112233333    3456666666666542    47788888876544

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK14967 putative methyltransferase; Provisional

Probab=94.95  E-value=0.78  Score=39.48  Aligned_cols=76  Identities=17%  Similarity=0.171  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+.++|-.|++.|.   ++..++..|. +|+.++.++..++...+.+...  +.++.++..|+.+.      +     ..
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~------~-----~~   99 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA------V-----EF   99 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh------c-----cC
Confidence            46789999987654   3445556676 8999999998877666555443  34577777776541      1     12


Q ss_pred             CCccEEEEccccC
Q 020927          107 LPLNILINNAGIM  119 (319)
Q Consensus       107 ~~id~lv~nag~~  119 (319)
                      +.+|++|.|..+.
T Consensus       100 ~~fD~Vi~npPy~  112 (223)
T PRK14967        100 RPFDVVVSNPPYV  112 (223)
T ss_pred             CCeeEEEECCCCC
Confidence            4799999998753

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.91  E-value=0.32  Score=44.14  Aligned_cols=119  Identities=15%  Similarity=0.183  Sum_probs=68.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC-C-CceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIP-N-AKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|.|.|| |.+|..++..++..|. +|++++++++.++.....+..... . .... +.. -++.   +    .+    
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~---~----~~----   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY---E----DI----   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH---H----HH----
Confidence            47899998 8899999999999875 899999988766544333322210 1 1111 111 0121   1    11    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|.++|...... .   .-.+.+.    ....+.+.+.+.+.+..    .++.+|+++.....
T Consensus        69 ~~aDiVii~~~~p~~~~-~---~r~~~~~----~n~~i~~~i~~~i~~~~----~~~~viv~tNP~d~  124 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-M---SRDDLLG----INAKIMKDVAEGIKKYA----PDAIVIVVTNPVDA  124 (307)
T ss_pred             CCCCEEEECCCCCCCcC-C---CHHHHHH----HHHHHHHHHHHHHHHHC----CCeEEEEecCcHHH
Confidence            26799999999643221 1   1122223    33455555656555432    35568888765543

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=94.90  E-value=0.53  Score=39.01  Aligned_cols=111  Identities=15%  Similarity=0.138  Sum_probs=72.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+.++=.|.+||+=.+.......-+...+.++.|+.+++.+.+..+..  +.++..+.+|+.+-  +       +.  ++
T Consensus        44 ~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n--~~~~~~V~tdl~~~--l-------~~--~~  110 (209)
T KOG3191|consen   44 PEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCN--RVHIDVVRTDLLSG--L-------RN--ES  110 (209)
T ss_pred             ceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhc--CCccceeehhHHhh--h-------cc--CC
Confidence            456777999999988887777765567778899999998877776554  56678888887652  2       22  48


Q ss_pred             ccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHh
Q 020927          109 LNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMG  153 (319)
Q Consensus       109 id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~  153 (319)
                      +|+||.|.++..... +...+.+...|.=-..|. .++..++|++.
T Consensus       111 VDvLvfNPPYVpt~~~~i~~~~i~~a~aGG~~Gr-~v~d~ll~~v~  155 (209)
T KOG3191|consen  111 VDVLVFNPPYVPTSDEEIGDEGIASAWAGGKDGR-EVTDRLLPQVP  155 (209)
T ss_pred             ccEEEECCCcCcCCcccchhHHHHHHHhcCcchH-HHHHHHHhhhh
Confidence            999999999764432 222333444443222222 23455555443

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.89  E-value=0.36  Score=43.96  Aligned_cols=93  Identities=23%  Similarity=0.192  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------HHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK------AIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~------~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      -.|+||+|.|.|- |.+|+++|+.|...|.+|++..|.....+....      .+........+..+.+-  ++++ ..+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HHH
Confidence            3479999999986 789999999999999999888765333221111      12222224455555554  3333 455


Q ss_pred             H-HHHHhcCCCccEEEEccccCCC
Q 020927           99 A-SEFKSSGLPLNILINNAGIMAT  121 (319)
Q Consensus        99 ~-~~i~~~~~~id~lv~nag~~~~  121 (319)
                      + +++.....+=.+|++..|+...
T Consensus        88 ~~~eil~~MK~GaiL~f~hgfni~  111 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGFNIH  111 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCccee
Confidence            4 3454444444678888886543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.87  E-value=0.22  Score=46.42  Aligned_cols=78  Identities=19%  Similarity=0.246  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.++||.|+ ++||..++..+...|+ +|+++++++++.+.+ +.+     +..   ..+|..+++..++ +.++.  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~---~~i~~~~~~~~~~-i~~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT---ATVNAGDPNAVEQ-VRELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEeCCCchhHHHH-HHHHh--C
Confidence            5789999985 8999998888888898 699999988776543 222     321   1234444332222 22222  2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.++|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            369999999883

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02928 oxidoreductase family protein

Probab=94.86  E-value=0.084  Score=48.86  Aligned_cols=38  Identities=29%  Similarity=0.302  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..+.||++.|.|- |.||+++|+.|...|++|+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999986 8999999999999999999999863

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.83  E-value=0.043  Score=44.78  Aligned_cols=40  Identities=30%  Similarity=0.424  Sum_probs=32.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..+++||+++|.|.+.-+|+.++..|.++|+.|.++.+..
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            4579999999999999999999999999999999987654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.83  E-value=0.22  Score=45.31  Aligned_cols=79  Identities=27%  Similarity=0.376  Sum_probs=48.2

Q ss_pred             CCCEEEE-eCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIV-TGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlI-tGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+..++| +||++++|.+++......|++|+.+++++++.+.+.+ +     +... ++  |..+.+..+. +.++.. .
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~~-~i--~~~~~~~~~~-v~~~~~-~  210 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAEY-VL--NSSDPDFLED-LKELIA-K  210 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCcE-EE--ECCCccHHHH-HHHHhC-C
Confidence            4444444 5999999999988777789999999998876554432 1     3221 22  2223222222 222211 1


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      .++|++|.+.|
T Consensus       211 ~~~d~vid~~g  221 (324)
T cd08291         211 LNATIFFDAVG  221 (324)
T ss_pred             CCCcEEEECCC
Confidence            26899999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.81  E-value=0.2  Score=43.33  Aligned_cols=76  Identities=14%  Similarity=0.137  Sum_probs=55.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.|++||=.|+++|   -++..||+.|++|...+-+++.++.........  +..+.+          ....++++.+..
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~--gv~i~y----------~~~~~edl~~~~  122 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALES--GVNIDY----------RQATVEDLASAG  122 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhc--cccccc----------hhhhHHHHHhcC
Confidence            88999999999999   588999999999999999988877655433222  222222          234455665555


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      +++|+++|.==
T Consensus       123 ~~FDvV~cmEV  133 (243)
T COG2227         123 GQFDVVTCMEV  133 (243)
T ss_pred             CCccEEEEhhH
Confidence            78999988654

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.81  E-value=0.75  Score=41.84  Aligned_cols=116  Identities=17%  Similarity=0.206  Sum_probs=70.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.|.|+ |.+|..++..|+.+|  ..|++++++++.++.....+....+- .......   .+.+       .    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hC
Confidence            5889998 899999999999999  47999999987766444444432111 1111111   1211       1    23


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ..|++|.++|....+.    ....+.+.    ....+++.+.+.+.+.    ..++.+++++....
T Consensus        67 ~aDiViita~~~~~~~----~~r~dl~~----~n~~i~~~~~~~l~~~----~~~giiiv~tNP~d  120 (308)
T cd05292          67 GADVVVITAGANQKPG----ETRLDLLK----RNVAIFKEIIPQILKY----APDAILLVVTNPVD  120 (308)
T ss_pred             CCCEEEEccCCCCCCC----CCHHHHHH----HHHHHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence            7899999999743211    12222333    3445566666665554    24678888876443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.81  E-value=0.2  Score=46.41  Aligned_cols=78  Identities=18%  Similarity=0.318  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.++||.|+ +++|.+.+..+...|+ +|+.+++++++.+.+. .+     +.. .  .+|..+++..+.+ .+... .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~-~--~i~~~~~~~~~~i-~~~~~-~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT-H--TVNSSGTDPVEAI-RALTG-G  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-e--EEcCCCcCHHHHH-HHHhC-C
Confidence            5889999985 9999999888888898 4999999887655442 22     321 1  1244433322222 22211 1


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      .++|++|.++|
T Consensus       244 ~g~d~vid~~g  254 (358)
T TIGR03451       244 FGADVVIDAVG  254 (358)
T ss_pred             CCCCEEEECCC
Confidence            25899999888

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.79  E-value=0.19  Score=40.97  Aligned_cols=43  Identities=21%  Similarity=0.226  Sum_probs=32.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      .+.+.||+++|.| =|-+|+.+|+.|...|++|+++..++-.+-
T Consensus        18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   18 NLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             ceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            4668999999997 478999999999999999999999985543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.78  E-value=0.057  Score=48.59  Aligned_cols=40  Identities=25%  Similarity=0.214  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..++.||.|+|.|.++-+|+.++..|.++|++|.++.|..
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t  193 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS  193 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence            4578999999999999999999999999999999997654

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.76  E-value=0.17  Score=46.26  Aligned_cols=79  Identities=16%  Similarity=0.172  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+.++||.|+++++|.+++..+-..|.+|+.+.++++..+.+ +.+     +...   .++..+.+...++.+..  ..+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---v~~~~~~~~~~~~~~~~--~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GADA---FVDFKKSDDVEAVKELT--GGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCcE---EEcCCCccHHHHHHHHh--cCC
Confidence            578999999999999999999999999999999998665433 222     2111   12333333333332221  123


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6899998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.74  E-value=0.29  Score=45.90  Aligned_cols=42  Identities=21%  Similarity=0.330  Sum_probs=36.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.+++|+|+++++|.+++..+...|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            578999999999999999988888999988888887765543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.74  E-value=0.23  Score=45.23  Aligned_cols=42  Identities=29%  Similarity=0.456  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .+.+++|.|+++.+|.+++..+...|.+|+.++++.+..+..
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999988776554

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=94.70  E-value=0.32  Score=40.55  Aligned_cols=79  Identities=23%  Similarity=0.145  Sum_probs=61.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...++.|++|+=.|++.|+   ++...+-.|+ .|+.++.+++.++...+...+.  ..++.++.+|+++..        
T Consensus        40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l--~g~v~f~~~dv~~~~--------  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEEL--LGDVEFVVADVSDFR--------  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhh--CCceEEEEcchhhcC--------
Confidence            4467899999999998775   2333445676 7999999999988777776663  678999999998742        


Q ss_pred             HHhcCCCccEEEEccccC
Q 020927          102 FKSSGLPLNILINNAGIM  119 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~  119 (319)
                           +++|.+|.|..+.
T Consensus       107 -----~~~dtvimNPPFG  119 (198)
T COG2263         107 -----GKFDTVIMNPPFG  119 (198)
T ss_pred             -----CccceEEECCCCc
Confidence                 3788999998754

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.69  E-value=0.26  Score=45.33  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+++|.|+ +++|..++..+...|+ +|++++++.++.+.+ ..+     +...   .+|..+.+..+.+. +.. ..
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~~~~~l~-~~~-~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTEVDVVAEVR-KLT-GG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCccCHHHHHH-HHh-CC
Confidence            5789999985 7999999999999999 798898888765543 222     3221   12444433222222 221 11


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +.+|++|.++|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            259999999883

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.69  E-value=0.27  Score=45.47  Aligned_cols=40  Identities=20%  Similarity=0.263  Sum_probs=34.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACRE   68 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~   68 (319)
                      .|.++||+| ++++|.+++..+...|. +|++++++++..+.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~  217 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLEL  217 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            688999997 59999999988888899 89999988766543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=94.68  E-value=0.25  Score=46.96  Aligned_cols=80  Identities=21%  Similarity=0.298  Sum_probs=51.8

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           32 AIVTGASSGIGTETARVLALRGV------HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~------~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |+|.| .||||-++++.|+..|.      ++.+++.+                   ..+.+.+.+.+.+.+|..++..+.
T Consensus         2 VlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~   80 (435)
T cd01490           2 VFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ   80 (435)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            67777 67999999999999998      68887632                   134555666666777777777777


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNA  116 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~na  116 (319)
                      ..+..... ..+-.++   +..+|++|++.
T Consensus        81 ~~v~~~~~-~~~~~~f---~~~~DvVi~al  106 (435)
T cd01490          81 NRVGPETE-HIFNDEF---WEKLDGVANAL  106 (435)
T ss_pred             cccChhhh-hhhhHHH---hcCCCEEEECC
Confidence            66643211 1111111   23567777663

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		4e-37
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		1e-12
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		6e-11
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		7e-11
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		2e-10
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-10
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		4e-10
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		6e-10
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-10
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-10
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-09
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-09
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-08
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-08
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-08
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-08
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-08
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-08
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		5e-08
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		6e-08
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		8e-08
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		9e-08
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-07
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-07
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-07
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		2e-07
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		5e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		6e-07
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		8e-07
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		8e-07
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		8e-07
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		1e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-06
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-06
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-06
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-06
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-06
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-06
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		3e-06
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-06
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-06
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		3e-06
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		3e-06
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		5e-06
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		5e-06
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-06
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		6e-06
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		8e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		9e-06
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		9e-06
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-05
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-05
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		2e-05
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-05
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-05
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-05
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-05
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-05
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		4e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-05
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		4e-05
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		5e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		6e-05
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-05
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		6e-05
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		7e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		7e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		9e-05
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		9e-05
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-04
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-04
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-04
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-04
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		1e-04
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-04
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-04
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-04
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-04
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-04
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-04
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		3e-04
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-04
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-04
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-04
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		4e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		4e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		6e-04
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		6e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		7e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-04
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		8e-04
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		8e-04
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		8e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/288 (37%), Positives = 144/288 (50%), Gaps = 28/288 (9%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T ++TGA+SG+G  TAR LA RG  V+MAVR+        + +       +V+  ELDL 
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-----GQVEVRELDLQ 72
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
            L+SVR+FA     +    ++LINNAGIMA P+ L+ D  E Q  TNH+GHF LTNLLL 
Sbjct: 73  DLSSVRRFADGVSGA----DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP 128
Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS-GYNRFSAYGQSKLANVLHT 209
            +           R+V VSS  H   +P  I  + +N +S  Y+ + AY QSKLAN+L T
Sbjct: 129 RL---------TDRVVTVSSMAH---WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFT 176
Query: 210 SELARRLKEDGVDITANSVHPGAITTNL--FRNISFFSGLVGLLGKYVIKNVEQGAATTC 267
           SEL RRL   G  + A + HPG   TNL           L+    + V  + + GA  T 
Sbjct: 177 SELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTL 236
Query: 268 YVALH----PHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDL 311
           Y A          G    Y   +     S +A +  +A  LW  S  L
Sbjct: 237 YAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQL 284

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 61/277 (22%)
Query: 32  AIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           A+VTGA+ GIG   AR L  +    VV+  R++A  +   + +  E  + +    +LD+ 
Sbjct: 5   ALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFH--QLDID 62
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM-----ATPFMLSKDNIELQFATNHIGHFLLT 145
            L S+R      +     LN+L+NNA +        PF +     E+   TN      + 
Sbjct: 63  DLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKA---EMTLKTNFFATRNMC 119
Query: 146 NLLLETMGKTARESSKEGRIVNVSS----------------RRHQFSYPEGIRFD----- 184
           N LL  M          GR+VN+SS                R H  +  EG   D     
Sbjct: 120 NELLPIM-------KPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKF 172
Query: 185 ------RINDQSGYNRFSAYGQSKLANVLHTSELARRLKE--DGVDITANSVHPGAITTN 236
                  ++++ G+   S YG SKL   + +  LARRL E      I  N+  PG + T+
Sbjct: 173 VEDTKNEVHEREGWPN-SPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTD 231
Query: 237 LFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHP 273
           +              GK  I+ VE+GA T  Y+AL P
Sbjct: 232 MD-------------GKDSIRTVEEGAETPVYLALLP 255

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 34/214 (15%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA+VTGA+ GIG   A  LA  G  V+++  N    +    +I K     K +A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FATNHIGHF 142
           D+S   SV+   +E ++    ++IL+NNA I+  PF ++ D+++L         N  G F
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PF-VAWDDVDLDHWRKIIDVNLTGTF 116
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           ++T    + M    R + K GR+++++S       P                 +AY  +K
Sbjct: 117 IVTRAGTDQM----RAAGKAGRVISIASNTFFAGTPN---------------MAAYVAAK 157
Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
              +  T  LA  L +   +ITAN+V PG I ++
Sbjct: 158 GGVIGFTRALATELGK--YNITANAVTPGLIESD 189

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 31  TAIVTGASSGIGTETA--RVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           T ++TGAS+GIG  TA   + A  G + +++A R +    E+KK I +E PNAKV   +L
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAG-IMATPFM--LSKDNIELQFATNHIGHFLL 144
           D++    ++ F          ++IL+NNAG  + +  +  ++ ++I+  F TN      +
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINI 154
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG 180
           T  +L        ++   G IVN+ S   + +YP G
Sbjct: 155 TQAVLPIF-----QAKNSGDIVNLGSIAGRDAYPTG 185

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 60/294 (20%)
Query: 32  AIVTGASSGIGTETARVLA-LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           A+VTG + GIG    R L  L    VV+  R++   +   + +  E  + +    +LD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDID 64
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM-----ATPFMLSKDNIELQFATNHIGHFLLT 145
            L S+R      +     L++L+NNAGI       TPF +     E+   TN  G   + 
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI---QAEVTMKTNFFGTRDVC 121
Query: 146 NLLLETMGKTARESSKEGRIVNVSS----RRHQFSYPE---GIRFDRINDQS---GYNRF 195
             LL  +         +GR+VNVSS    R  +   PE     R + I ++      N+F
Sbjct: 122 TELLPLI-------KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174
Query: 196 ----------------SAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTNL 237
                           SAYG +K+   + +   AR+L E   G  I  N+  PG + T+ 
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD- 233
Query: 238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVA-LHPHVKGLTGSYFADSNVAQ 290
                       + G    K+ E+GA T  Y+A L P  +G  G + ++  V Q
Sbjct: 234 ------------MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 275

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 60/294 (20%)
Query: 32  AIVTGASSGIGTETARVLA-LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           A+VTG + GIG    R L  L    VV+  R++   +   + +  E  + +    +LD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH--QLDID 64
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM-----ATPFMLSKDNIELQFATNHIGHFLLT 145
            L S+R      +     L++L+NNAGI       TPF +     E+   TN  G   + 
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHI---QAEVTMKTNFFGTRDVX 121
Query: 146 NLLLETMGKTARESSKEGRIVNVSS----RRHQFSYPE---GIRFDRINDQS---GYNRF 195
             LL  +         +GR+VNVSS    R  +   PE     R + I ++      N+F
Sbjct: 122 TELLPLI-------KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174
Query: 196 ----------------SAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTNL 237
                           SAYG +K+   + +   AR+L E   G  I  N+  PG + T+ 
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD- 233
Query: 238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVA-LHPHVKGLTGSYFADSNVAQ 290
                       + G    K+ E+GA T  Y+A L P  +G  G + ++  V Q
Sbjct: 234 ------------MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 275

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 32  AIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           A+VTGA+ GIG    R L  +    VV+  R++A  +   K +  E  + +    +LD+ 
Sbjct: 7   ALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLDII 64
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM-----ATPFMLSKDNIELQFATNHIG-HFLL 144
            L S+R      +     L++L+NNA I       TPF +     EL   TN +G   + 
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTRNVC 121
Query: 145 TNL--LLETMGKTARESSKEG-RIVNVSSRRHQFSYPE---------GIRFDRIND-QSG 191
           T L  L++  G+    SS EG R +N  S   Q  +           G+    + D ++G
Sbjct: 122 TELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNG 181
Query: 192 YNRF-----SAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTNLFRNISFF 244
            +R      S YG +K+   + +   AR+L+E   G  I  N+  PG + T++       
Sbjct: 182 VHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMG------ 235
Query: 245 SGLVGLLGKYVIKNVEQGAATTCYVALHP-HVKGLTGSYFADSNVAQ 290
                  G    K+ E GA T  Y+AL P   +G  G +  D  V +
Sbjct: 236 -------GPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVTDKKVVE 275

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 34/214 (15%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA+VTGA+ GIG   A  LA  G  V+++  N    +    +I K     K +A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-----KARAIAA 59
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FATNHIGHF 142
           D+S   SV+   +E ++    ++IL+NNA I+  PF+ + D+++L         N  G F
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIV--PFV-AWDDVDLDHWRKIIDVNLTGTF 116
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           ++T    +      R + K GR+++++S       P                 +AY  +K
Sbjct: 117 IVTRAGTDQX----RAAGKAGRVISIASNTFFAGTPN---------------XAAYVAAK 157
Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
              +  T  LA  L +   +ITAN+V PG I ++
Sbjct: 158 GGVIGFTRALATELGK--YNITANAVTPGLIESD 189

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG +         D + L    TN  G F +T  
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 141 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 182
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 183 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 214

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           AIVTGAS GIG   A  LA  G  VV+      AA  EV   I  E    K    + D+S
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI--EAAGGKALTAQADVS 87
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFMLSKDNI-ELQFATNHIGHFLLTNLL 148
             A+VR+  +  + +   +++L+NNAGI   T    + D + +   A N  G F      
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTF------ 141
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
             T+ + A+     GRI+N S+ +    +P                +  Y  +K      
Sbjct: 142 -NTLREAAQRLRVGGRIINXSTSQVGLLHPS---------------YGIYAAAKAGVEAX 185
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLF 238
           T  L++ L+  G DIT N+V PG   T+LF
Sbjct: 186 THVLSKELR--GRDITVNAVAPGPTATDLF 213

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG +         D + L    TN  G F +T  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 145 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 187 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 218

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGAS GIG E A  LA +G  VV    + A+  + + +  KE    K + + L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENS-XKE-KGFKARGLVLNISD 65
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL--LL 149
           + S++ F +E K+  L ++IL+NNAGI       ++DN+  + + +     + TNL  + 
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 150 ETMGKTARESSKE--GRIVNVSSRRHQFSYPEGIRFDRINDQS-GYNRFSAYGQSKLANV 206
               +  R   K+  GRI+++ S       P    +        G+++  AY        
Sbjct: 119 RXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAY-------- 170
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
               E+A R      +IT N V PG I T+
Sbjct: 171 ----EVASR------NITVNVVAPGFIATD 190

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 145 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 187 FTKALGLELARTG--ITVNAVCPGWVETPMAASV 218

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 141 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 182
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 183 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 145 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGLVHAAPYSASKHGVVG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 187 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 218

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 145 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 187 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 218

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 64
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 125 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 166
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 167 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 198

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA--MELDL 89
           A+VTGA+SGIG E AR L   G+ V +  R      E  +  +KE+  A V+A     D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARG----EEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KDNIELQFA-TNHIGHFLLTNL 147
            S+  +    +       P+++L+NNAG           D + L    TN  G F +T  
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+  G   R +   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 145 VLKAGGMLERGT---GRIVNIAS---------------TGGKQGVVHAAPYSASKHGVVG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  L   L   G  IT N+V PG + T +  ++
Sbjct: 187 FTKALGLELARTG--ITVNAVCPGFVETPMAASV 218

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
Query: 27  GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
           G    A+VTGA  GIG E A++LA    HV+   R   +C     ++V EI +   ++  
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----DSVVDEIKSFGYESSG 97
Query: 87  L--DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLL 144
              D+S    + +  ++  +    ++IL+NNAGI       ++DN+ L+   +     L 
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLR 150
Query: 145 TNL--LLETMGKTARE--SSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           TNL  L       ++   +++ GRI+N+SS               I   +G    + Y  
Sbjct: 151 TNLNSLFYITQPISKRMINNRYGRIINISS---------------IVGLTGNVGQANYSS 195
Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE 260
           SK   +  T  LA+ L     +IT N++ PG I++++   IS        + K +I N+ 
Sbjct: 196 SKAGVIGFTKSLAKELASR--NITVNAIAPGFISSDMTDKIS------EQIKKNIISNIP 247
Query: 261 QGAATT 266
            G   T
Sbjct: 248 AGRMGT 253

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SGL A+VTGA  GIG +T + L   G  VV   R  +       ++ KE P   ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKECPG--IEPVCV 59
Query: 88  DLSSLASVRKFASEFKSSGL-PLNILINNAG-IMATPFM-LSKDNIELQFATNHIGHFLL 144
           DL         A+E    G+ P+++L+NNA  ++  PF+ ++K+  +  F+ N    F +
Sbjct: 60  DLGDWD-----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           + ++   M          G IVNVSS     ++P  I                Y  +K A
Sbjct: 115 SQMVARDM----INRGVPGSIVNVSSMVAHVTFPNLI---------------TYSSTKGA 155
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             + T  +A  L      I  NSV+P  + T++ + +S
Sbjct: 156 MTMLTKAMAMELGPH--KIRVNSVNPTVVLTDMGKKVS 191

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A++TG ++GIG   A   A+ G  +  A+ ++    E + AI       +V  ++ D+S 
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADI--AIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQ 65
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMA-TPF-MLSKDNIELQFATNHIGHFLLTNLLL 149
              V  F  +  S+    +IL+NNAGI    PF  L+ +  +  F  N    FL+    +
Sbjct: 66  PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125
Query: 150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHT 209
             M +        GRI+N++S  +                     ++ Y  +K AN+  T
Sbjct: 126 PGMKRNGW-----GRIINLTSTTYWLK---------------IEAYTHYISTKAANIGFT 165
Query: 210 SELARRLKEDGVDITANSVHPGAITT 235
             LA  L +DG  IT N++ P  + T
Sbjct: 166 RALASDLGKDG--ITVNAIAPSLVRT 189

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A +LA RG  V+       A  E     + +      + M L+
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI-----GTATSESGAQAISDYLGDNGKGMALN 66
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           +++  S+             ++IL+NNAGI     ++     E      TN    F L+ 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M K      ++GRI+NV S               +    G    + Y  +K   +
Sbjct: 127 AVLRGMMK-----KRQGRIINVGS---------------VVGTMGNAGQANYAAAKAGVI 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T  +AR +   GV  T N+V PGAI T++ +
Sbjct: 167 GFTKSMAREVASRGV--TVNTVAPGAIETDMTK 197

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL--DLS 90
           +VTG S GIG    R+ A +G  V +   N AA RE   A+V  I  +  +A+ +  D+ 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGV---NYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHIGHFLLTNL 147
           + A +    S        L+ L+NNAGI+  P  +   S + IE     N  G  L    
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCA-- 144
Query: 148 LLETMGKTAR-ESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             E + + +R  S + G IVNVSS                       ++  Y  SK A  
Sbjct: 145 -AEAVRRXSRLYSGQGGAIVNVSSXAAILGSA--------------TQYVDYAASKAAID 189
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNL 237
             T  LAR +  +G+ +  N+V PG I T+L
Sbjct: 190 TFTIGLAREVAAEGIRV--NAVRPGIIETDL 218

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A+VTGAS GIG   AR L   G  VV+  R++   R V++ IV      + ++   
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHAC 85
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKD-NIELQFATNHIGHFLL 144
           DLS   ++  FA+   ++    ++L+NNAG+     P    K    +   A N    +LL
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLL 145
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  M      ++K G I+N+SS   +    +G               +AY  SK  
Sbjct: 146 LRAFAPAM-----IAAKRGHIINISSLAGKNPVADG---------------AAYTASKWG 185
Query: 205 -NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV 259
            N L TS  A  L++  V ++   V PG++ T     +S     +G +    I +V
Sbjct: 186 LNGLMTSA-AEELRQHQVRVSL--VAPGSVRTEFGVGLSAKKSALGAIEPDDIADV 238

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ--AMELD 88
           +A+VTGAS GIG   A  LA  G +V +   N A  +E  +A+V+EI    V   A++ +
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 68
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL- 147
           ++    V+    E  S    L++L+NNAGI       ++DN+ ++         + TNL 
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDTNLK 121
Query: 148 -LLETMGKTARE--SSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
            +   + K   +    + G I+N+SS       P            G   + A   +K  
Sbjct: 122 GVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP------------GQANYVA---TKAG 166
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            +  T   AR L   G  IT N+V PG I +++   +S
Sbjct: 167 VIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDALS 202

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 44/233 (18%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           SG + I+TG+S+GIG   A + A  G  V +  RN     E K+ I+K  +P  K+ A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--------MATPFMLSKDNIELQFATNH 138
            D++  +      +   +    ++IL+NNAG            P  L +   +L F    
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF---- 140
Query: 139 IGHFLLTNLLLETMGKTARESSK-EGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
                    ++E   KT     K +G IVNVSS     + P+          SGY     
Sbjct: 141 -------QAVIEMTQKTKEHLIKTKGEIVNVSSI---VAGPQA--------HSGY---PY 179
Query: 198 YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL 250
           Y  +K A   +T   A  L + GV +  NSV PGA+ T        F G +GL
Sbjct: 180 YACAKAALDQYTRCTAIDLIQHGVRV--NSVSPGAVATG-------FMGAMGL 223

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A  LA RG  V+       A  E     + +   A  + + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI-----GTATSENGAQAISDYLGANGKGLMLN 59
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           ++  AS+     + ++    ++IL+NNAGI     ++   + E      TN    F L+ 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            ++  M K      + GRI+ + S               +    G    + Y  +K   +
Sbjct: 120 AVMRAMMK-----KRHGRIITIGS---------------VVGTMGNGGQANYAAAKAGLI 159
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             +  LAR +   G  IT N V PG I T++ R +S
Sbjct: 160 GFSKSLAREVASRG--ITVNVVAPGFIETDMTRALS 193

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN---AKVQAM 85
           G  ++VTG++ GIG   A  LA  G  V++         E  KA+ +EI N    K   +
Sbjct: 7   GKVSLVTGSTRGIGRAIAEKLASAGSTVIIT----GTSGERAKAVAEEIANKYGVKAHGV 62
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFL 143
           E++L S  S+ K   E  +    ++IL+NNAGI      L    ++ +     N  G FL
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFL 122
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +T   L  M K      + GRIVN+SS    F+   G    ++N          Y  +K 
Sbjct: 123 VTQNSLRKMIK-----QRWGRIVNISSVVG-FTGNVG----QVN----------YSTTKA 162
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +  T  LA+ L     ++  N+V PG I T++
Sbjct: 163 GLIGFTKSLAKELAPR--NVLVNAVAPGFIETDM 194

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTG S GIG   A+ L   G  V +  R+  AC +    +         QA+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA---YGDCQAIPA 84
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKD--NIELQFATNHIGHFLLT 145
           DLSS A  R+ A         L+IL+NNAG      + S      E     N    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             LL  + ++A  +    R++N+ S         GI    + +Q+      AYG SK A 
Sbjct: 145 QQLLPLLRRSA-SAENPARVINIGSV-------AGI--SAMGEQA-----YAYGPSKAA- 188
Query: 206 VLHTSELARRLKED--GVDITANSVHPGAITTNLFRNIS 242
            LH  +L+R L ++  G  I  N + PG   + + R+I+
Sbjct: 189 -LH--QLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA 224

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A  LA RG  V+       A  E     + +   A  + + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI-----GTATSENGAQAISDYLGANGKGLMLN 59
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           ++  AS+     + ++    ++IL+NNAGI     ++   + E      TN    F L+ 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            ++  M K      + GRI+ + S                    G   F+A   +K   +
Sbjct: 120 AVMRAMMK-----KRHGRIITIGSVVGTMG------------NGGQANFAA---AKAGLI 159
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             +  LAR +   G  IT N V PG I T++ R +S
Sbjct: 160 GFSKSLAREVASRG--ITVNVVAPGFIETDMTRALS 193

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 90/213 (42%), Gaps = 30/213 (14%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
           +G TA VTG S GIG   A+ LAL G  V +   N A   E  +A+V EI  A  +  A+
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA---ERAQAVVSEIEQAGGRAVAI 86
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFMLSK-DNIELQFATNHIGHFL 143
             D     ++ +   E   +   L+IL+N+AGI  + P   +   + +   A N    F+
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFV 146
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                   +   +R     GRI+ + S   +     GI              S Y  SK 
Sbjct: 147 -------AIRSASRHLGDGGRIITIGSNLAELVPWPGI--------------SLYSASKA 185
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           A    T  LAR L   G  IT N VHPG+  T+
Sbjct: 186 ALAGLTKGLARDLGPRG--ITVNIVHPGSTDTD 216

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME--LDLS 90
           ++TGAS GIG   AR L + G  +++  R  A      +AI  EI +A   A+   LD++
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARI----EAIATEIRDAGGTALAQVLDVT 63
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFMLSK-DNIELQFATNHIGHFLLTNLL 148
              SV  FA     +   +++L+NNAG+M  +P    K D  E     N  G       +
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M     E+ + G+I+N+ S               I   S     + Y  +K A    
Sbjct: 124 LPIM-----EAQRSGQIINIGS---------------IGALSVVPTAAVYCATKFA---- 159
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
              ++  L+++  +I    V+PG + + L   I+
Sbjct: 160 VRAISDGLRQESTNIRVTCVNPGVVESELAGTIT 193

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 87/230 (37%), Gaps = 35/230 (15%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D SG  A++TGAS+GIG + A   A  G  V +A R+  A + V   I       K   +
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPI 86
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA--TNHIGHFL 143
             D++    VR    +       ++I + NAGI++   ML     E Q    TN  G FL
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFL 146
Query: 144 LTNLLLETM------GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
                   M      G     +S  G I+N+                         + S 
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIP-----------------------QQVSH 183
Query: 198 YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL 247
           Y  SK A V  T  +A  L      I  NSV PG I T L   ++ +  L
Sbjct: 184 YCTSKAAVVHLTKAMAVELAPH--QIRVNSVSPGYIRTELVEPLADYHAL 231

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A +LA RG  V+       A  E     + +      + M L+
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI-----GTATSESGAQAISDYLGDNGKGMALN 66
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           +++  S+             ++IL+NNAGI     ++     E      TN    F L+ 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M K      ++GRI+NV S               +    G    + Y  +K   +
Sbjct: 127 AVLRGMMK-----KRQGRIINVGS---------------VVGTMGNAGQANYAAAKAGVI 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T  +AR +   GV  T N+V PG I T++ +
Sbjct: 167 GFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A +LA RG  V+       A  E     + +      + M L+
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI-----GTATSESGAQAISDYLGDNGKGMALN 66
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           +++  S+             ++IL+NNAGI     ++     E      TN    F L+ 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M K      ++GRI+NV S                   +G   F+A   +K   +
Sbjct: 127 AVLRGMMK-----KRQGRIINVGSVVGTMG------------NAGQANFAA---AKAGVI 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T  +AR +   GV  T N+V PG I T++ +
Sbjct: 167 GFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           AIVTGAS GIG   A  LA RG  V+      A    +  A  +     +   + ++ ++
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90
Query: 92  L--ASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNL 147
              A V     EF +    LN+L+NNAGI        +  D  +    TN    F L+  
Sbjct: 91  AVDALVESTLKEFGA----LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRA 146
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L  M K     ++ GRIVN++S       P      ++N          Y  +K     
Sbjct: 147 VLRPMMK-----ARGGRIVNITSVVGSAGNP-----GQVN----------YAAAKAGVAG 186
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  LAR +   G  IT N V PG I T++ + +
Sbjct: 187 MTRALAREIGSRG--ITVNCVAPGFIDTDMTKGL 218

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           +D SG    VTGA  GIG  TA      G  V              +A  +E      + 
Sbjct: 3   MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVT----------GFDQAFTQEQYPFATEV 52
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHF 142
           M  D++  A V +      +    L+ L+N AGI  M     LSK++ +  FA N  G F
Sbjct: 53  M--DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAF 110
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
              NL  +TM +  R+  + G IV V+S        +     RI         SAYG SK
Sbjct: 111 ---NLFQQTMNQFRRQ--RGGAIVTVAS--------DAAHTPRIG-------MSAYGASK 150
Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            A  L +  L+  L+  G  +  N V PG+  T++ R +
Sbjct: 151 AA--LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTL 187

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ--AMELD 88
           +A+VTGAS GIG   A  LA  G +V +   N A  +E  +A+V+EI    V   A++ +
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           ++    V+    E  S    L++L+NNAGI     +      E      TN  G F   N
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVF---N 119
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            + +   +  R+ S  G I+N+SS       P            G   + A   +K   +
Sbjct: 120 CIQKATPQXLRQRS--GAIINLSSVVGAVGNP------------GQANYVA---TKAGVI 162
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
             T   AR L   G  IT N+V PG I ++
Sbjct: 163 GLTKSAARELASRG--ITVNAVAPGFIVSD 190

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL- 87
           G  A+VTGAS GIG   A+ LA  G  V +   N    +E  +  V EI +    A  + 
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR---KEEAEETVYEIQSNGGSAFSIG 63
Query: 88  -DLSSLASVRKFASEF------KSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNH 138
            +L SL  V    S        ++     +ILINNAGI    F+   ++   +   + N 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRXVSVNA 123
Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              F +    L  +    R++S   RI+N+SS   + S P+               F AY
Sbjct: 124 KAPFFIIQQALSRL----RDNS---RIINISSAATRISLPD---------------FIAY 161
Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
             +K A    T  LA++L   G  IT N++ PG + T+
Sbjct: 162 SXTKGAINTXTFTLAKQLGARG--ITVNAILPGFVKTD 197

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIV G + G G  T R L   G  V++  RN     E   A ++E    +V A+  D
Sbjct: 8   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSD 62
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPF-MLSKDNIELQFATNHIGHFLLTN 146
           ++ L  +    +    +   +++L  NAG+    PF  +S+ + + QFA N  G F    
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            L   +    RE    G IV  SS               + D+ G+   S Y  SK A V
Sbjct: 123 RLTPLI----REG---GSIVFTSS---------------VADEGGHPGXSVYSASKAALV 160
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
              S LA  L   G+ +  NSV PG I T
Sbjct: 161 SFASVLAAELLPRGIRV--NSVSPGFIDT 187

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 31/209 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIV G + G G  T R L   G  V++  RN     E   A ++E    +V A+  D
Sbjct: 7   GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSD 61
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPF-MLSKDNIELQFATNHIGHFLLTN 146
           ++ L  +    +    +   +++L  NAG+    PF  +S+ + + QFA N  G F    
Sbjct: 62  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 121
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            L   +    RE    G IV  SS               + D+ G+   S Y  SK A V
Sbjct: 122 RLTPLI----REG---GSIVFTSS---------------VADEGGHPGXSVYSASKAALV 159
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
              S LA  L   G+ +  NSV PG I T
Sbjct: 160 SFASVLAAELLPRGIRV--NSVSPGFIDT 186

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAM 85
           +G TA+VTGA SGIG   A   A  G HV+   R      +  K +  EI +     +A+
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAV 84
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLT 145
             DL+ L      A E  ++   +++L+NNAGI+A       + + L      +   L  
Sbjct: 85  VADLADLEGAANVAEELAAT-RRVDVLVNNAGIIARA---PAEEVSLGRWREVLTVNLDA 140
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +L     TA  +   GRIV ++S     S+           Q G N  +AY  SK A 
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIAS---MLSF-----------QGGRN-VAAYAASKHAV 185
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           V  T  LA      GV +  N++ PG + T
Sbjct: 186 VGLTRALASEWAGRGVGV--NALAPGYVVT 213

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGAS GIG   AR L  +G+ VV   R +    E+            +     DLS+
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL-LE 150
              +    S  +S    ++I INNAG       L++ +  L  +T+        N+L L 
Sbjct: 95  EEDILSMFSAIRSQHSGVDICINNAG-------LARPDTLLSGSTSGWKDMFNVNVLALS 147
Query: 151 TMGKTARESSKE-----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              + A +S KE     G I+N++S       P  +             F  Y  +K A 
Sbjct: 148 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV-----------THF--YSATKYAV 194
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
              T  L + L+E    I A  + PG + T  
Sbjct: 195 TALTEGLRQELREAQTHIRATCISPGVVETQF 226

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 85/214 (39%), Gaps = 26/214 (12%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK-EIPNAKVQAMELDL 89
           TA VTG SSGIG   AR LA RG+ V    R+    + V  A+         V     D+
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARD---AKNVSAAVDGLRAAGHDVDGSSCDV 82
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNL 147
           +S   V    +       P+ IL+N+AG          D+        TN  G F +T  
Sbjct: 83  TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTRE 142
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L   G   RE+   GRIVN++S                  + G    + Y  SK   V 
Sbjct: 143 VLRAGGM--REAGW-GRIVNIAS---------------TGGKQGVMYAAPYTASKHGVVG 184
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  +   L + G  IT N+V PG + T +   +
Sbjct: 185 FTKSVGFELAKTG--ITVNAVCPGYVETPMAERV 216

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG S GIG  +A + A +G  V +   N A+       +V++I  A  QA+ +  + +
Sbjct: 29  LITGGSRGIGAASALLAARQGYAVAV---NYASNSAAADEVVRQIREAGGQALAVQ-ADV 84
Query: 93  ASVRKFASEFKSSGLP---LNILINNAGIMATPFMLSKDNIELQ-----FATNHIGHFLL 144
           A  R+  + F++       L+ L+NNAG++     +  D I L+     F  N  G FL 
Sbjct: 85  AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRV--DGITLERLQRXFEINVFGSFLC 142
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               ++    + R     G IVNVSS   +   P               ++  Y  +K A
Sbjct: 143 AREAVKRX--STRYGGSGGSIVNVSSAAARLGSP--------------GQYVDYAAAKGA 186
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
               T  LA+ +  +G+ +  N+V PG I T++
Sbjct: 187 IDTFTLGLAKEVATEGIRV--NAVRPGIIETDI 217

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA++TG++ GIG   A      G  V +A  N+ A R    A   EI  A   A+ L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AIAL 58
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  AS+ +  +E       ++IL+NNA +  +A    +++++ +  FA N  G    T
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSG----T 114
Query: 146 NLLLETMGKTARESSKEGRIVNVSSR 171
             +++ + +      + G+I+N++S+
Sbjct: 115 LFMMQAVARAMIAGGRGGKIINMASQ 140

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   ++TGA  GIG  TA   A     +V+   N     E   A  K +  AKV    +
Sbjct: 30  TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA-AKCKGL-GAKVHTFVV 87
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLT 145
           D S+   +   A + K+    ++IL+NNAG++ T   F      IE  F  N + HF  T
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M K     +  G IV V+S     S P  + +         ++F+A G  K   
Sbjct: 148 KAFLPAMTK-----NNHGHIVTVASAAGHVSVPFLLAYCS-------SKFAAVGFHKTL- 194
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
              T ELA  L+  GV  T   + P  + T   +N S
Sbjct: 195 ---TDELA-ALQITGVKTTC--LCPNFVNTGFIKNPS 225

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D SG  AIVTG S GIG   AR L   G  V +A  ++ A     +A+V  + N    A+
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA----QAVVAGLENGGF-AV 63
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFL 143
           E+D++  ASV     +   +    ++L  NAG+  M     ++ +  +  F  N  G FL
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
              +           S+ +G IVN +S   +   P                 + Y  SK 
Sbjct: 124 ANQIACRHF----LASNTKGVIVNTASLAAKVGAP---------------LLAHYSASKF 164
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           A    T  LAR +     +I  N V PG + T +
Sbjct: 165 AVFGWTQALAREMAPK--NIRVNCVCPGFVKTAM 196

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A +LA RG  V+       A  E     + +      + M L+
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI-----GTATSESGAQAISDYLGDNGKGMALN 66
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           +++  S+             ++IL+NNA I     ++     E      TN    F L+ 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M K      ++GRI+NV S               +    G    + Y  +K   +
Sbjct: 127 AVLRGMMK-----KRQGRIINVGS---------------VVGTMGNAGQANYAAAKAGVI 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T  +AR +   GV  T N+V PG I T++ +
Sbjct: 167 GFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A++TG+SSGIG   A   A  G H+V+  R +    E  +++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D+++   V       +SS    +IL+NNAG  +   ++   + + QF      H +    
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWEL--HVMAAVR 122
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           L   +    R       I N S    Q  + E I                Y  +K A ++
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPI----------------YNVTKAALMM 166
Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
            +  LA  + +D  +I  N ++PG I T
Sbjct: 167 FSKTLATEVIKD--NIRVNCINPGLILT 192

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D +G TA+VTG++ G+G   A  LA  G  V++         E    + ++  +A    +
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA--HGV 63
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFL 143
             D++   ++    S+  + G+ ++ILINNAGI     M  L  +N +    TN    FL
Sbjct: 64  AFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFL 123
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           ++    + M   AR S   G+I+N+ S   Q + P    +            +A G  K+
Sbjct: 124 VSRSAAKRM--IARNSG--GKIINIGSLTSQAARPTVAPYT-----------AAKGGIKM 168
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                 +E A+       +I  N++ PG I T++
Sbjct: 169 LTCSMAAEWAQ------FNIQTNAIGPGYILTDM 196

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A +LA RG  V+       A  E     + +      + M L+
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVI-----GTATSESGAQAISDYLGDNGKGMALN 66
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           +++  S+             ++IL+NNA I     ++     E      TN    F L+ 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 126
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M K      ++GRI+NV S               +    G    + Y  +K   +
Sbjct: 127 AVLRGMMK-----KRQGRIINVGS---------------VVGTMGNAGQANYAAAKAGVI 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T  +AR +   GV  T N+V PG I T++ +
Sbjct: 167 GFTKSMAREVASRGV--TVNTVAPGFIETDMTK 197

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI----VKE-IPNAKVQAME 86
           A+VTGA SGIG   +  LA  G  V     + AA +E  + +     KE  P     A +
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69
Query: 87  LDLSSLASVRKFASEFKSS-GLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFL 143
            D+S   + R    + ++    P +++++ AGI    F+L  S+D+ +   A N  G FL
Sbjct: 70  ADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFL 129
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +T    + +      +   G I+N+SS               I  + G    + Y  SK 
Sbjct: 130 VTQAAAQAL----VSNGCRGSIINISS---------------IVGKVGNVGQTNYAASKA 170
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             +  T   AR L   G  I  NSV PG I T + + +
Sbjct: 171 GVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQKV 206

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A++TG+SSGIG   A   A  G H+V+  R +    E  +++ KE    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAV 64
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQF 134
           D+++   V       +SS    +IL+NNAG  +   ++   + + QF
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQF 111

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA+ GIG   A V A  G HVV A+   +A   + +   K        A+ LD
Sbjct: 197 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 251
Query: 89  LSSLASVRKFASEFKS-SGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           +++  +V K +   +   G   +IL+NNAGI     + + D+       A N +    LT
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLT 311
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+           + GR++ +SS               I   +G    + Y  +K   
Sbjct: 312 EGLVGNG-----SIGEGGRVIGLSS---------------IAGIAGNRGQTNYATTKAGM 351
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
           +  T  LA  L   G  IT N+V PG I T +   I   +  VG
Sbjct: 352 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVG 393

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN--AKVQAME 86
           G  A+VTGAS GIG   A  LA +G +VV+   N A   +    +V EI    +   A+ 
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLL 144
            D+++   V     +       ++IL+NNAG+     +  + ++  +    TN  G FL 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGY--NRFSAYGQSK 202
           T  +   M +      + GRIVN++S       P          Q+ Y   +    G +K
Sbjct: 121 TKAVSRFMMR-----QRHGRIVNIASVVGVTGNP---------GQANYVAAKAGVIGLTK 166
Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            +      ELA R      +IT N++ PG I T++
Sbjct: 167 TS----AKELASR------NITVNAIAPGFIATDM 191

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA+ GIG   A V A  G HVV A+   +A   + +   K        A+ LD
Sbjct: 205 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 259
Query: 89  LSSLASVRKFASEFKS-SGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           +++  +V K +   +   G   +IL+NNAGI     + + D+       A N +    LT
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLT 319
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+           + GR++ +SS               I   +G    + Y  +K   
Sbjct: 320 EGLVGN-----GSIGEGGRVIGLSS---------------IAGIAGNRGQTNYATTKAGM 359
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
           +  T  LA  L   G  IT N+V PG I T +   I   +  VG
Sbjct: 360 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVG 401

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA+ GIG   A V A  G HVV A+   +A   + +   K        A+ LD
Sbjct: 213 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 267
Query: 89  LSSLASVRKFASEFKS-SGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           +++  +V K +   +   G   +IL+NNAGI     + + D+       A N +    LT
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLT 327
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+           + GR++ +SS               I   +G    + Y  +K   
Sbjct: 328 EGLVGN-----GSIGEGGRVIGLSS---------------IAGIAGNRGQTNYATTKAGM 367
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
           +  T  LA  L   G  IT N+V PG I T +   I   +  VG
Sbjct: 368 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVG 409

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA+ GIG   A V A  G HVV A+   +A   + +   K        A+ LD
Sbjct: 221 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 275
Query: 89  LSSLASVRKFASEFKS-SGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           +++  +V K +   +   G   +IL+NNAGI     + + D+       A N +    LT
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLT 335
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+           + GR++ +SS               I   +G    + Y  +K   
Sbjct: 336 EGLVGN-----GSIGEGGRVIGLSS---------------IAGIAGNRGQTNYATTKAGM 375
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
           +  T  LA  L   G  IT N+V PG I T +   I   +  VG
Sbjct: 376 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVG 417

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AIVTGA+ GIG   A V A  G HVV A+   +A   + +   K        A+ LD
Sbjct: 234 GKVAIVTGAARGIGATIAEVFARDGAHVV-AIDVESAAENLAETASK----VGGTALWLD 288
Query: 89  LSSLASVRKFASEFKS-SGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLT 145
           +++  +V K +   +   G   +IL+NNAGI     + + D+       A N +    LT
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLT 348
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+           + GR++ +SS               I   +G    + Y  +K   
Sbjct: 349 EGLVGN-----GSIGEGGRVIGLSS---------------IAGIAGNRGQTNYATTKAGM 388
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
           +  T  LA  L   G  IT N+V PG I T +   I   +  VG
Sbjct: 389 IGITQALAPGLAAKG--ITINAVAPGFIETQMTAAIPLATREVG 430

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 32/213 (15%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            IVTG+  GIG   A  LA  G  VV+A  N  A   V K IV +       ++ +D+S 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSD 69
Query: 92  LASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQ--FATNHIGHFLLTN 146
             S +  A    +    ++ L+NNA I   M   F+L+ D    +   + N  G    T 
Sbjct: 70  PESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR 129
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            + + M K        G IVN SS                     Y+ +  YG +K+   
Sbjct: 130 AVYKKMTKRG-----GGAIVNQSSTAAWL----------------YSNY--YGLAKVGIN 166
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T +L+R L   G +I  N++ PG I T   R
Sbjct: 167 GLTQQLSRELG--GRNIRINAIAPGPIDTEANR 197

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGAS GIG   A  LA RG  V+       A  E     + +   A  + + L+
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVI-----GTATSENGAQAISDYLGANGKGLMLN 59
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
           ++  AS+     + ++    ++IL+NNAGI     ++   + E      TN    F L+ 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            ++  M K      + GRI+ +  + +                        Y  +K   +
Sbjct: 120 AVMRAMMK-----KRHGRIITIGGQAN------------------------YAAAKAGLI 150
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
             +  LAR +   G  IT N V PG I T+
Sbjct: 151 GFSKSLAREVASRG--ITVNVVAPGFIETS 178

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 35/217 (16%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV-----QAME 86
           A VTG   GIGT   + L   G  VV      A C       VK + + K       A E
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVV------AGCGPNSPRRVKWLEDQKALGFDFYASE 69
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLL 144
            ++    S ++   + K+    +++L+NNAGI        +++++ +    TN    F +
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNV 129
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  +++ M +        GRI+N+SS               +N Q G    + Y  +K  
Sbjct: 130 TKQVIDGMVERGW-----GRIINISS---------------VNGQKGQFGQTNYSTAKAG 169
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
               T  LA+ +   GV  T N+V PG I T++ + I
Sbjct: 170 IHGFTMSLAQEVATKGV--TVNTVSPGYIGTDMVKAI 204

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 91/221 (41%), Gaps = 31/221 (14%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA---ACREVKKAIVKEIPNAKV 82
           D  G + +VTG + GIG   A V A  G +V +A R+ A   AC     A + ++ + KV
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDAC----VADLDQLGSGKV 62
Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPF-MLSKDNIELQFATNHIG 140
             ++ D+S  A     A         ++++  NAG+    P   ++ + +   FA N  G
Sbjct: 63  IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNG 122
Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            F      L+ +      +S  GR+V  SS                   +GY  +S YG 
Sbjct: 123 TFYAVQACLDAL-----IASGSGRVVLTSSITGPI--------------TGYPGWSHYGA 163
Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITT-NLFRN 240
           +K A +      A  L      IT N++ PG I T  L  N
Sbjct: 164 TKAAQLGFMRTAAIELAPH--KITVNAIMPGNIMTEGLLEN 202

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGA++G+G   A  LA  G  VV A R   A  E    I K+  NA   A+ +D
Sbjct: 9   GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR--APDETLDIIAKDGGNA--SALLID 64
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLTN 146
            +   + +     F  +G   +IL+NNAGI+  A     S+ + +     N    F  T 
Sbjct: 65  FADPLAAK---DSFTDAG--FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTT- 118
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
              +   K      + G++VN++S     S+  GI            R  +Y  +K    
Sbjct: 119 ---QAFAKELLAKGRSGKVVNIAS---LLSFQGGI------------RVPSYTAAKHGVA 160
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
             T  LA      G+++  N++ PG I TN
Sbjct: 161 GLTKLLANEWAAKGINV--NAIAPGYIETN 188

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           ID +G T+++TGASSGIG+  AR+L   G  V+++  N     E K   +K + NA    
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN-----EEK---LKSLGNALKDN 61
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLS-KD-NIELQFATNHIGHF 142
             +++ +LA+ ++  S   S    L+IL+ NAGI +    +  KD + +     N   +F
Sbjct: 62  YTIEVCNLAN-KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANF 120
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           +L    ++ M +      + GRI+N+SS               I   +G    + Y  SK
Sbjct: 121 ILNREAIKKMIQ-----KRYGRIINISS---------------IVGIAGNPGQANYCASK 160
Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
              +  T  L+  +   G  IT N+V PG I +++
Sbjct: 161 AGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDM 193

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTGA+ GIG   A  L L+G  V +   N+ A  + K A+ ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D++    +R    +       L+IL+NNAG+       ++ N E     N +     T L
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 119
Query: 148 LLETMGKTARESSKEGRIVNVSS 170
            L+ M K  +   + G I+N+SS
Sbjct: 120 GLDYMSK--QNGGEGGIIINMSS 140

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQ 83
           D  G TA+VTG+S G+G   A  LA+ G  +++   N      V +  V+E  N     +
Sbjct: 23  DLGGRTALVTGSSRGLGRAMAEGLAVAGARILI---NGTDPSRVAQT-VQEFRNVGHDAE 78
Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFL 143
           A+  D++S + + +  +     G+ ++IL+NNAGI        K  IEL+ A       +
Sbjct: 79  AVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGI-----QFRKPMIELETADWQ--RVI 131
Query: 144 LTNLLLETMGKTARESSKE------GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
            TNL    M    RE++K       G+IVN+ S   + +                   + 
Sbjct: 132 DTNLTSAFM--IGREAAKRMIPRGYGKIVNIGSLTSELARAT---------------VAP 174
Query: 198 YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           Y  +K    + T  +A    + G  I AN++ PG + T++
Sbjct: 175 YTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDM 212

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VTGASSG G   A      G  V+   R   A  +    +V   P+ + +A+ LD++  
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD----LVAAYPD-RAEAISLDVTDG 63
Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNLLLE 150
             +   A++  +    +++L+NNAG             EL+  F  +  G   LT  LL 
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL- 122
Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 210
                 RE    G +VN+SS   Q S               +  FSAY  +K A    + 
Sbjct: 123 ---PQXRERGS-GSVVNISSFGGQLS---------------FAGFSAYSATKAALEQLSE 163
Query: 211 ELARRLKEDGVDITANSVHPGAITTNLF-RNISFFS 245
            LA  +   G+ +    V PGA  TNLF +  ++FS
Sbjct: 164 GLADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYFS 197

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D S   A+VTG SSGIG  T  +L   G  V    R+    R  + A+ +  P A++ A 
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAG 117
             D+     VR FA   + +    +IL+NNAG
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAG 96

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 41/224 (18%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
           +G   ++TGAS GIG E A+ LA  G+ V +  R+ A   EV  A+  E+     K   +
Sbjct: 28  TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNA---EVADALKNELEEKGYKAAVI 84
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLT 145
           + D +S +   +       S   L+ L+NNAG++       +D + ++  T    H +  
Sbjct: 85  KFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVV-------RDKLAIKMKTEDFHHVIDN 137
Query: 146 NLLLETMGKTARES------SKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
           NL    +G   RE+      S+ G +VNV+S          I  +R N   G   +SA  
Sbjct: 138 NLTSAFIG--CREALKVMSKSRFGSVVNVAS----------IIGERGN--MGQTNYSASK 183
Query: 200 QSKLANVLHTSELARRLKEDGV--DITANSVHPGAITTNLFRNI 241
              +A       +++    +G   +I  NSV PG I T++  N+
Sbjct: 184 GGMIA-------MSKSFAYEGALRNIRFNSVTPGFIETDMNANL 220

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 30  LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           +  +VTGA++G G    R    +G  V+   R     +E+K  +   +  A     +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA-----QLDV 55
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGI---MATPFMLSKDNIELQFATNHIGHFLLTN 146
            + A++ +  +   +    ++IL+NNAG+   M      S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M +        G I+N+ S    + Y  G               + YG +K    
Sbjct: 116 AVLPGMVE-----RNHGHIINIGSTAGSWPYAGG---------------NVYGATKA--F 153
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
           +    L  R    G  +    + PG +    F N+ F
Sbjct: 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRF 190

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 119/284 (41%), Gaps = 48/284 (16%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-----AACREVKKAIVKEIPNA 80
           D  G   ++TG+S+G+G   A   A     VV+  R+      +   E+KK   + I   
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 81  KVQAMELDLSSL--ASVRKFASEFKSSGLPLNILINNAGIMATPFM---LSKDNIELQFA 135
               +E D+ +L  +++++F          L+++INNAG +A P     +S  +      
Sbjct: 64  GDVTVESDVINLVQSAIKEFGK--------LDVMINNAG-LANPVSSHEMSLSDWNKVID 114
Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
           TN  G FL +   +    K   E+  +G ++N+SS   +  +P                F
Sbjct: 115 TNLTGAFLGSREAI----KYFVENDIKGTVINMSSVHEKIPWP---------------LF 155
Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL----FRNISFFSGLVGLL 251
             Y  SK    L T  LA      G+ +  N++ PGAI T +    F +    + +  ++
Sbjct: 156 VHYAASKGGMKLMTETLALEYAPKGIRV--NNIGPGAINTPINAEKFADPEQRADVESMI 213
Query: 252 GKYVIKNVEQGAATTCYVALHP--HVKGLTGSYFADSNVAQASS 293
               I   E+ AA   ++A     +V G+T   FAD  + Q  S
Sbjct: 214 PMGYIGEPEEIAAVAAWLASSEASYVTGIT--LFADGGMTQYPS 255

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL- 87
           G  A+VTGAS GIG   A +LA RG  V+    + +  + +   +     N K  A+ + 
Sbjct: 9   GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGXALNVT 65
Query: 88  DLSSLASVRK-FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLL 144
           +  S+ +V K    EF      ++IL+NNAGI     +      E      TN    F L
Sbjct: 66  NPESIEAVLKAITDEFGG----VDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRL 121
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           +  +L    K      ++GRI+NV S               +    G    + Y  +K  
Sbjct: 122 SKAVLRGXXK-----KRQGRIINVGS---------------VVGTXGNAGQANYAAAKAG 161
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTN 236
            +  T   AR +   GV  T N+V PG I T+
Sbjct: 162 VIGFTKSXAREVASRGV--TVNTVAPGFIETD 191

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 36/213 (16%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ---AMELD 88
           AI+TGAS GIG   A  LA  G  VV+  R+     +V   I +   N  VQ    + LD
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRS--NKHVQEPIVLPLD 67
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNA-----GIMATPFMLSKDNIELQFATNHIGHFL 143
           ++          +       ++IL+N A     G ++ P     DN       N I  + 
Sbjct: 68  ITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV----DNFRKIXEINVIAQYG 123
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +   + E       +  K G I NV+SR  ++ + +G                 YG +K 
Sbjct: 124 ILKTVTEIX-----KVQKNGYIFNVASRAAKYGFADG---------------GIYGSTKF 163
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
           A +     L R L   G+ +T  ++ PG + T+
Sbjct: 164 ALLGLAESLYRELAPLGIRVT--TLCPGWVNTD 194

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP--NAKVQAME 86
           G  A+VTG+  GIG   A  L   G  VV+   N A   +  + +V EI    +   A++
Sbjct: 18  GKVALVTGSGRGIGAAVAVHLGRLGAKVVV---NYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLL 144
            D+  +  + K   +  +    L+I ++N+G+++   +  ++++  +  F+ N  G F +
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                    +  R  ++ GRIV  SS   + FS P               + S Y  SK 
Sbjct: 135 AR-------EAYRHLTEGGRIVLTSSNTSKDFSVP---------------KHSLYSGSKG 172
Query: 204 ANVLHTSELARRLKEDGVD--ITANSVHPGAITTNLFRNIS 242
           A         R   +D  D  IT N+V PG   T++F  +S
Sbjct: 173 A----VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVS 209

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 39/218 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA-KVQAMEL 87
           G TA+VTG S GIG      LA  G  V    RN    +E+   + +      KV+A   
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 64
Query: 88  DLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKD----NIELQFATNHI 139
           DLSS +  ++     A+ F      LNIL+NNAGI+   +  +KD    +  L  + N  
Sbjct: 65  DLSSRSERQELMNTVANHFHGK---LNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFE 119
Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             + L+      +     ++S+ G +V +SS     + P             Y   + YG
Sbjct: 120 AAYHLS-----VLAHPFLKASERGNVVFISSVSGALAVP-------------YE--AVYG 159
Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            +K A    T  LA    +D  +I  N V PG I T+L
Sbjct: 160 ATKGAMDQLTRCLAFEWAKD--NIRVNGVGPGVIATSL 195

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 93/218 (42%), Gaps = 39/218 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA-KVQAMEL 87
           G TA+VTG S GIG      LA  G  V    RN    +E+   + +      KV+A   
Sbjct: 9   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 65
Query: 88  DLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKD----NIELQFATNHI 139
           DLSS +  ++     A+ F      LNIL+NNAGI+   +  +KD    +  L  + N  
Sbjct: 66  DLSSRSERQELMNTVANHFHGK---LNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFE 120
Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             + L+      +     ++S+ G +V +SS     + P             Y   + YG
Sbjct: 121 AAYHLS-----VLAHPFLKASERGNVVFISSVSGALAVP-------------YE--AVYG 160
Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            +K A    T  LA    +D  +I  N V PG I T+L
Sbjct: 161 ATKGAMDQLTRCLAFEWAKD--NIRVNGVGPGVIATSL 196

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 24/213 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG++SGIG   A  LA  G  VV+         E +++ ++     K   +  D
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNAD 63
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTN 146
           LS   + R F ++   +   L+IL+NNAGI  T  +     D      A N    F  T 
Sbjct: 64  LSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTA 123
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  M K        GRI+N++S     +         +N        SAY  +K   V
Sbjct: 124 AALPIMQKQGW-----GRIINIASAHGLVA--------SVNK-------SAYVAAKHGVV 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T   A  L+  G  IT N++ PG + T L  
Sbjct: 164 GLTKVTA--LENAGKGITCNAICPGWVRTPLVE 194

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 24/215 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AI+TG + GIG   A      G  V++  R+     +  K++    P+ ++Q  + D
Sbjct: 6   GKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV--GTPD-QIQFFQHD 62
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
            S      K     + +  P++ L+NNAGI     +      E +   A N  G F  T 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L ++ M      +S    I+N+SS        EG     + D S      AY  SK A  
Sbjct: 123 LGIQRMKNKGLGAS----IINMSSI-------EGF----VGDPS----LGAYNASKGAVR 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           + +   A        D+  N+VHPG I T L  ++
Sbjct: 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 24/215 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  AI+TG + GIG   A      G  V++  R+     +  K++    P+ ++Q  + D
Sbjct: 6   GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV--GTPD-QIQFFQHD 62
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTN 146
            S      K     + +  P++ L+NNAGI     +      E +   A N  G F  T 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L ++ M      +S    I+N+SS        EG     + D S      AY  SK A  
Sbjct: 123 LGIQRMKNKGLGAS----IINMSSI-------EGF----VGDPS----LGAYNASKGAVR 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           + +   A        D+  N+VHPG I T L  ++
Sbjct: 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 46/283 (16%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-----AACREVKKAIVKEIPNA 80
           D  G   ++TG+S+G+G   A   A     VV+  R+      +   E+KK   + I   
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 81  KVQAMELDLSSL--ASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFAT 136
               +E D+ +L  +++++F          L+++INNAG+    +   +S  +      T
Sbjct: 64  GDVTVESDVINLVQSAIKEFGK--------LDVMINNAGLENPVSSHEMSLSDWNKVIDT 115
Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N  G FL +   +    K   E+  +G ++N+SS   +  +P                F 
Sbjct: 116 NLTGAFLGSREAI----KYFVENDIKGTVINMSSVHEKIPWP---------------LFV 156
Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL----FRNISFFSGLVGLLG 252
            Y  SK    L T  LA      G+ +  N++ PGAI T +    F +    + +  ++ 
Sbjct: 157 HYAASKGGMKLMTETLALEYAPKGIRV--NNIGPGAINTPINAEKFADPEQRADVESMIP 214
Query: 253 KYVIKNVEQGAATTCYVALHP--HVKGLTGSYFADSNVAQASS 293
              I   E+ AA   ++A     +V G+T   FAD  + Q  S
Sbjct: 215 MGYIGEPEEIAAVAAWLASSEASYVTGIT--LFADGGMTQYPS 255

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 88/213 (41%), Gaps = 24/213 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG++SGIG   A  LA +G  +V+     AA  E  +A +      KV     D
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD 63
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTN 146
           LS   +VR            ++IL+NNAGI  T  +     +  +   A N    F  T 
Sbjct: 64  LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  M K        GRI+N++S     +                N+ SAY  +K   V
Sbjct: 124 AALPHMKKQGF-----GRIINIASAHGLVASA--------------NK-SAYVAAKHGVV 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T   A  L+  G  ITAN++ PG + T L  
Sbjct: 164 GFTKVTA--LETAGQGITANAICPGWVRTPLVE 194

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A++T  + G+G +    L  +G  V +   +     E  K   K++   ++Q ++ D++ 
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE-RLQFVQADVTK 68
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL---- 147
              + K   E  S    ++ LINNAG    P++  +  + + +  +     +  NL    
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAG----PYVFERKKL-VDYEEDEWNEMIQGNLTAVF 123
Query: 148 -LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            LL+ +    R+ +  GRI+N               F   +   G+   SA+  +K+  V
Sbjct: 124 HLLKLVVPVMRKQNF-GRIINYG-------------FQGADSAPGWIYRSAFAAAKVGLV 169
Query: 207 LHTSELARRLKEDGVDITANSVHPGAI 233
             T  +A    E G  ITAN V PG I
Sbjct: 170 SLTKTVAYEEAEYG--ITANMVCPGDI 194

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 30/253 (11%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTGAS GIG   A  LA  G  V +   + +A    +          +  A++ D+S 
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYAS-SAGAADEVVAAIAAAGGEAFAVKADVSQ 89
Query: 92  LASVRK-FASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLTNLL 148
            + V   FA+  +  G  L++L+NNAGI     +L   +D+ +     N  G FL +   
Sbjct: 90  ESEVEALFAAVIERWG-RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAA 148
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            + M K      + GRI+N++S   +   P            G   +SA   +K   +  
Sbjct: 149 AKIMLK-----QRSGRIINIASVVGEMGNP------------GQANYSA---AKAGVIGL 188
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL-VGLLGKYVIKNVEQGAATTC 267
           T  +A+ L   G  IT N+V PG I T++   ++    L V  LG+Y      + A    
Sbjct: 189 TKTVAKELASRG--ITVNAVAPGFIATDMTSELAAEKLLEVIPLGRY--GEAAEVAGVVR 244
Query: 268 YVALHPHVKGLTG 280
           ++A  P    +TG
Sbjct: 245 FLAADPAAAYITG 257

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDLS 90
           AI+TG+S+GIG  TA + A  G  V +  R+     E ++ I+   +    V ++  D++
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSK----DNIELQFATNHIGHFLLTN 146
           + A   +  S        L+IL+NNAG  A P   SK     +IE   AT ++    L +
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILVNNAG-AAIPDSQSKTGTAQSIESYDATLNLN---LRS 124
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQF-SYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
           ++  T       SS +G IVN+SS      + P+               F  Y  +K A 
Sbjct: 125 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPD---------------FPYYSIAKAAI 169
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
             +T   A  L + G+ +  NS+ PG + T  
Sbjct: 170 DQYTRNTAIDLIQHGIRV--NSISPGLVATGF 199

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 29/214 (13%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDL 89
           A+VTGA  GIG   A  L   G  V +A  N A      KA+  EI  A     A+++D+
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA----KAVASEINQAGGHAVAVKVDV 60
Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIM-ATPF-MLSKDNIELQFATNHIGHFLLTNL 147
           S    V     + + +    ++++NNAG+  +TP   ++ + ++  +  N  G       
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQA 120
Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            +E      ++    G+I+N  S+      PE                + Y  SK A   
Sbjct: 121 AVEAF----KKEGHGGKIINACSQAGHVGNPE---------------LAVYSSSKFAVRG 161
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T   AR L   G  IT N   PG + T ++  I
Sbjct: 162 LTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEI 193

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTGA+ GIG   A V A  G  VV A+    A  ++K+   K        A+ LD
Sbjct: 213 GKVAVVTGAARGIGATIAEVFARDGATVV-AIDVDGAAEDLKRVADK----VGGTALTLD 267
Query: 89  LSSLASVRKFASEF-KSSGLPLNILINNAGIMATPFMLSKDN--IELQFATNHIGHFLLT 145
           +++  +V K  +   +  G  ++IL+NNAGI     + + D    +   A N +    LT
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLT 327
Query: 146 NLLL--ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
             L+   T+G+        GR++ +SS         GI  +R          + Y  +K 
Sbjct: 328 EGLVGNGTIGEG-------GRVIGLSSM-------AGIAGNRGQ--------TNYATTKA 365
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
             +     LA  L + G  IT N+V PG I T +   I   +  VG
Sbjct: 366 GMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVG 409

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP--NAKVQAME 86
           G  A+VTG+  GIG   A  L   G  VV+   N A   +  + +V EI    +   A++
Sbjct: 18  GKVALVTGSGRGIGAAVAVHLGRLGAKVVV---NYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLL 144
            D+  +  + K   +  +    L+I ++N+G+++   +  ++++  +  F+ N  G F +
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFV 134
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                    +  R  ++ GRIV  SS   + FS P               + S +  SK 
Sbjct: 135 AR-------EAYRHLTEGGRIVLTSSNTSKDFSVP---------------KHSLFSGSKG 172
Query: 204 ANVLHTSELARRLKEDGVD--ITANSVHPGAITTNLFRNIS 242
           A         R   +D  D  IT N+V PG   T++F  +S
Sbjct: 173 A----VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVS 209

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA+VTG+++GIG   A  L   G +V++  R      E  K I  + P+A +Q +  D
Sbjct: 10  GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVAD 69
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTN 146
           L +    +    ++      ++ILINN GI      F +  ++    F  N      LT 
Sbjct: 70  LGTEQGCQDVIEKYPK----VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTR 125
Query: 147 LLLETMGKTARESSKEGRIVNVSS 170
             L+   +      KEGR++ ++S
Sbjct: 126 SYLKKXIE-----RKEGRVIFIAS 144

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           D +G TA VTG ++G+G    R L  +G  V +A     +  +    +  E    +V  +
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI 118
           +LD++S    +  A E ++   P++IL NNAG+
Sbjct: 65  QLDVASREGFKMAADEVEARFGPVSILCNNAGV 97

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
            D  G  A+VTG S G+G   A+ LA  G  VV+A RN+    E  + + ++    +  A
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMA 75
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI 118
              D+S+   V+K     K     L+ ++N AGI
Sbjct: 76  FRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 24/213 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG++SGIG   A  LA +G  +V+     AA  E  +A +      KV     D
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD 63
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTN 146
           LS   +VR            ++IL+NNAGI  T  +     +  +   A N    F  T 
Sbjct: 64  LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  M K        GRI+N++S     +                N+ SAY  +K   V
Sbjct: 124 AALPHMKKQGF-----GRIINIASAHGLVASA--------------NK-SAYVAAKHGVV 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             T   A  L+  G  ITAN++ PG + + L  
Sbjct: 164 GFTKVTA--LETAGQGITANAICPGWVRSPLVE 194

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 35/241 (14%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK--AIVKEIPNAKVQ 83
           D S  + +VTG + GIG   A V A  G +V +A R+    RE+    A + E+    V 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARS---PRELSSVTAELGELGAGNVI 94
Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGH 141
            + LD+S   S    A     +   L+++  NAGI     +  ++ + +      N  G 
Sbjct: 95  GVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGT 154
Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
                  L  +  + R     GR++  SS                   +GY  +S YG S
Sbjct: 155 VYTVQACLAPLTASGR-----GRVILTSSITGPV--------------TGYPGWSHYGAS 195
Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGL-----VGLLGKY 254
           K A +      A  L   GV  T N++ PG I T    ++   + SG+     +G+LG  
Sbjct: 196 KAAQLGFMRTAAIELAPRGV--TVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP 253
Query: 255 V 255
           V
Sbjct: 254 V 254

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           + +VTG + GIG   A+ LA  G  V +  R   A +              +  +E+D++
Sbjct: 37  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVT 83
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              +V +  +  +    P+ +L++NAG+ A  F+  ++++  E     N  G F +    
Sbjct: 84  DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 143
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
             +M     + +K GR++ ++S               ++   G    + Y  SK   +  
Sbjct: 144 SRSM-----QRNKFGRMIFIAS---------------VSGLWGIGNQANYAASKAGVIGM 183
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              +AR L +   ++TAN V PG I T++ R +
Sbjct: 184 ARSIARELSK--ANVTANVVAPGYIDTDMTRAL 214

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           + +VTG + GIG   A+ LA  G  V +  R   A +              +  +E D++
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVECDVT 63
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              +V +  +  +    P+ +L++NAG+ A  F+  ++++  E     N  G F +    
Sbjct: 64  DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 123
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
             +M     + +K GR++ + S               ++   G    + Y  SK   +  
Sbjct: 124 SRSM-----QRNKFGRMIFIGS---------------VSGSWGIGNQANYAASKAGVIGM 163
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              +AR L +   ++TAN V PG I T++ R +
Sbjct: 164 ARSIARELSK--ANVTANVVAPGYIDTDMTRAL 194

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G TA+VTG+S GIG   A  LA  G HV++      +   V++ I+        Q +  D
Sbjct: 33  GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGD 90
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFMLSKDNIELQFATNHIGHFLLTN 146
           LS   +      E   +  P++IL+ NA   I AT   L+ +++  Q A N +G  +  +
Sbjct: 91  LSEAGAGTDLI-ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVN-LGSTV--D 146
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           +L   + K    + K GR+V++ S               IN     +  +AY  +K A  
Sbjct: 147 MLQSALPKMV--ARKWGRVVSIGS---------------INQLRPKSVVTAYAATKAAQH 189
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTN 236
                 AR    D V +  N++ PG + T+
Sbjct: 190 NLIQSQARDFAGDNVLL--NTLAPGLVDTD 217

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 29/213 (13%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG  SG+G  TA  LA  G  + +   +       K A+++  P+A+V     D+S  
Sbjct: 17  LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL---- 148
           A V  + +        ++   NNAGI        K N    F        +  NL     
Sbjct: 77  AQVEAYVTATTERFGRIDGFFNNAGIEG------KQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 149 -LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            LE + K  RE    G +VN +S         GIR   I +QSG      Y  +K   V 
Sbjct: 131 GLEKVLKIMREQGS-GMVVNTASVG-------GIR--GIGNQSG------YAAAKHGVVG 174
Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            T   A      G+ I  N++ PGAI T +  N
Sbjct: 175 LTRNSAVEYGRYGIRI--NAIAPGAIWTPMVEN 205

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 87/214 (40%), Gaps = 24/214 (11%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG++SGIG   A  LA +G  +V+     AA  E  +A +      KV     D
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD 63
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTN 146
           LS   +VR            ++IL+NNAGI  T  +     +  +   A N    F  T 
Sbjct: 64  LSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA 123
Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
             L  M K        GRI+N++S     +                N+ SAY  +K   V
Sbjct: 124 AALPHMKKQGF-----GRIINIASAHGLVASA--------------NK-SAYVAAKHGVV 163
Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             T   A  L+  G  ITAN++ PG +   L   
Sbjct: 164 GFTKVTA--LETAGQGITANAICPGWVRAPLVEK 195

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           + +VTG + GIG   A+ LA  G  V +  R   A +              +  +E+D++
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVT 63
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              +V +  +  +    P+ +L++NAG+ A  F+  ++++  E     N  G F +    
Sbjct: 64  DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 123
Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
             +M     + +K GR++ + S               ++   G    + Y  SK   +  
Sbjct: 124 SRSM-----QRNKFGRMIFIGS---------------VSGLWGIGNQANYAASKAGVIGM 163
Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFR 239
              +AR L +   ++TAN V PG I T++ R
Sbjct: 164 ARSIARELSK--ANVTANVVAPGYIDTDMTR 192

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--E 86
           G TAIVTG+S G+G   A  L   G ++V+   N +       A  +E   A +  +  +
Sbjct: 5   GKTAIVTGSSRGLGKAIAWKLGNMGANIVL---NGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLL 144
            D+ +   V         +   ++IL+NNAGI     ML  S+ + +    TN    +L 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLC 121
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T  + + M K      K G+I+N++S               I    G    + Y  SK  
Sbjct: 122 TKAVSKIMLK-----QKSGKIINITS---------------IAGIIGNAGQANYAASKAG 161
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            +  T  +A+     G  I  N+V PG I T++
Sbjct: 162 LIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDM 192

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           G  A+VTG +SG+G E  ++L   G  V  +  N AA +++   +       +   +  D
Sbjct: 6   GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHD 60
Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIE-----LQFATNHIGHFL 143
           +SS A      +  +     LN+L+NNAGI+  P  +    +E     L+  T  +  F+
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESV--FI 117
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                +  M +T       G I+N++S               ++      +++ Y  SK 
Sbjct: 118 GCQQGIAAMKETG------GSIINMAS---------------VSSWLPIEQYAGYSASKA 156
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           A    T   A   ++ G  I  NS+HP  I T + +
Sbjct: 157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-----AACREVKKAIVKEIPNA 80
           D  G   ++TG+S+G+G   A   A     VV+  R+      +   E+KK   + I   
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 81  KVQAMELDLSSL--ASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFAT 136
               +E D+ +L  +++++F          L+++INNAG+    +   +S  +      T
Sbjct: 64  GDVTVESDVINLVQSAIKEFGK--------LDVMINNAGLENPVSSHEMSLSDWNKVIDT 115
Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N  G FL +   +    K   E+  +G ++N+SS   +  +P                F 
Sbjct: 116 NLTGAFLGSREAI----KYFVENDIKGTVINMSSVHEKIPWP---------------LFV 156
Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            Y  SK    L T  LA      G+ +  N++ PGAI T +
Sbjct: 157 HYAASKGGMKLMTETLALEYAPKGIRV--NNIGPGAINTPI 195

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-----AACREVKKAIVKEIPNA 80
           D  G   ++TG+S+G+G   A   A     VV+  R+      +   E+KK   + I   
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63
Query: 81  KVQAMELDLSSL--ASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFAT 136
               +E D+ +L  +++++F          L+++INNAG+    +   +S  +      T
Sbjct: 64  GDVTVESDVINLVQSAIKEFGK--------LDVMINNAGLENPVSSHEMSLSDWNKVIDT 115
Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N  G FL +   +    K   E+  +G ++N+SS   +  +P                F 
Sbjct: 116 NLTGAFLGSREAI----KYFVENDIKGTVINMSSVHEKIPWP---------------LFV 156
Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            Y  SK    L T  LA      G+ +  N++ PGAI T +
Sbjct: 157 HYAASKGGMKLMTKTLALEYAPKGIRV--NNIGPGAINTPI 195

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A+VTG + GIG E  + L+  G+ VV+  R++    E  + + K   +  V   +LD++ 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVTD 73
Query: 92  -LASVRKFASEFKSSGLPLNILINNAGI 118
            +A++   A   K+    L+IL+NNAG+
Sbjct: 74  PIATMSSLADFIKTHFGKLDILVNNAGV 101

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA  GIG  T + L   G  VV   R  A       ++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPG--IEPVCV 59
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL    +  +      S G P+++L+NNA + +  PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATER---ALGSVG-PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            ++    G  AR     G IVNVSS+                 Q      S Y  +K A 
Sbjct: 116 QIVAR--GLIAR--GVPGAIVNVSSQ---------------XSQRAVTNHSVYCSTKGAL 156
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            + T  +A  L      I  N+V+P  + T++
Sbjct: 157 DMLTKVMALELGPH--KIRVNAVNPTVVMTSM 186

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK-KAIVKEIPNAKVQA 84
           D +G  A+VTGA+ G+G   AR L     H   A+  +   RE K K +  E+   ++  
Sbjct: 4   DLTGRKALVTGATGGLGEAIARAL-----HAQGAIVGLHGTREEKLKELAAEL-GERIFV 57
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHF 142
              +LS   +V+    + +     ++IL+NNAGI        +S ++ +     N    F
Sbjct: 58  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 117
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSS 170
            LT  L   M +      + GRI+N++S
Sbjct: 118 NLTRELTHPMMR-----RRNGRIINITS 140

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK-KAIVKEIPNAKVQA 84
           D +G  A+VTGA+ G+G   AR L     H   A+  +   RE K K +  E+   ++  
Sbjct: 7   DLTGRKALVTGATGGLGEAIARAL-----HAQGAIVGLHGTREEKLKELAAEL-GERIFV 60
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHF 142
              +LS   +V+    + +     ++IL+NNAGI        +S ++ +     N    F
Sbjct: 61  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 120
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSS 170
            LT  L   M +      + GRI+N++S
Sbjct: 121 NLTRELTHPMMR-----RRNGRIINITS 143

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA  GIG  T + L   G  VV   R  A       ++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPG--IEPVCV 59
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL    +  +      S G P+++L+NNA + +  PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATER---ALGSVG-PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            ++    G  AR     G IVNVSS+                 Q      S Y  +K A 
Sbjct: 116 QIVAR--GLIAR--GVPGAIVNVSSQ---------------CSQRAVTNHSVYCSTKGAL 156
Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            + T  +A  L      I  N+V+P  + T++
Sbjct: 157 DMLTKVMALELGPH--KIRVNAVNPTVVMTSM 186

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 41/260 (15%)
Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR---------NMAACREVKKAI-VK 75
           D  G TA++TG + G+G   A  LA  G  + +  R          +A   ++ + + + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 76  EIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ-- 133
           E    +  + ++D+   A++  F +E + +   ++I I NAGI     +   ++ +    
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEV 126
Query: 134 FATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR-HQFSYPEGIRFDRINDQSGY 192
             TN  G F     +   M K        GRIV VSS   H  ++ +             
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSSMLGHSANFAQ------------- 168
Query: 193 NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG 252
              ++Y  SK   +  T   A  L   G  IT N+V PG I T +  N   F  +   L 
Sbjct: 169 ---ASYVSSKWGVIGLTKCAAHDLV--GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLE 223
Query: 253 KYVIKNVEQGAATTCYVALH 272
           K  +K+VE     + + +LH
Sbjct: 224 KPTLKDVE-----SVFASLH 238

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMA--VRNMAACREVKKAIVKEIPNAKVQAME 86
           G TA+VTG++SGIG   A+VLA  G ++V+        A  E+ +  VK + +       
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPA----- 58
Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLL 144
            DLS +A +    +  +     ++IL+NNAGI  +A       ++ +   A N    F  
Sbjct: 59  -DLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T L L  M      +   GRI+N++S               ++   G    +AY  +K  
Sbjct: 118 TRLALPGM-----RARNWGRIINIAS---------------VHGLVGSTGKAAYVAAKHG 157
Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            V  T  +   L+    ++T N++ PG + T L +
Sbjct: 158 VVGLTKVVG--LETATSNVTCNAICPGWVLTPLVQ 190

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           IVTG  SGIG  TA + A  G +VV+A  N  A   V   I      +K   + +D+SS 
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSA 85
Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATP--FMLSKDNIELQFATNHIGHFLLTNLLLE 150
                   +  +    +++L+NNAG   T     + ++  +   + N  G FL +  ++ 
Sbjct: 86  KDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIP 145
Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 210
              +        G I+N +S    ++    I  DR          +AY  SK A    T 
Sbjct: 146 VXRRNG-----GGSIINTTS----YTATSAIA-DR----------TAYVASKGAISSLTR 185
Query: 211 ELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             A    ++G+ +  N+V PG I +  F  I
Sbjct: 186 AXAXDHAKEGIRV--NAVAPGTIDSPYFTKI 214

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           A++TGA SGIG  TA  LA  GV V    R      EV   IV      +  A+E D+S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSD 88
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMAT--------PFMLSKDNIELQFATNHIGHFL 143
               R    +       L+I++ NAGI           PF   +       A N  G FL
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDE-----TIAVNLRGTFL 143
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
             +L +  +     +    G IV VSS          I   R     G   ++A   +++
Sbjct: 144 TLHLTVPYL-----KQRGGGAIVVVSS----------INGTRTFTTPGATAYTATKAAQV 188
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           A V    +LA  L +    I  N+V PGAI TN+  N
Sbjct: 189 AIV---QQLALELGKH--HIRVNAVCPGAIETNISDN 220

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 85/212 (40%), Gaps = 39/212 (18%)
Query: 32  AIVTGASSGIGTETARVLALRGVHVVMA----VRNMAACREVKKAIVKEIPNAKVQAMEL 87
           AI+TGA  GIG ET+RVLA  G  VV+A         A   V +  V  +         +
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHV---------V 64
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML----SKDNIELQFATNHIGHFL 143
           DL++  SVR        +   L+I+ NNA       ML    + D  +  F  N  G  L
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +    +  +      S+  G IVN+SS                   + Y+  +AY  +K 
Sbjct: 125 MCKYAIPRL-----ISAGGGAIVNISSA---------------TAHAAYDMSTAYACTKA 164
Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           A    T  +A +    GV    N++ PG + T
Sbjct: 165 AIETLTRYVATQYGRHGV--RCNAIAPGLVRT 194

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM-- 85
            G  AI+TGA +GIG E A   A  G  VV++  N  A   V    V EI     QA   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV----VDEIQQLGGQAFAC 65
Query: 86  ELDLSSLASVRKFASEFKSSGL-PLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFL 143
             D++S   +   A +F  S L  ++IL+NNAG     PF +   +    +  N    F 
Sbjct: 66  RCDITSEQELSALA-DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFH 124
Query: 144 LTNLLLETMGK 154
           L+ L+   M K
Sbjct: 125 LSQLVAPEMEK 135

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMEL 87
           G  A+VTGA  GIG E A  L  RG  V++   N   +  EV  AI K   +A      +
Sbjct: 29  GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV 88
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
            +     VR F    K  G  L+I+ +N+G+++   +  ++ +  +  F  N  G F + 
Sbjct: 89  GVVE-DIVRMFEEAVKIFG-KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV- 145
Query: 146 NLLLETMGKTARESSKE----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
                     ARE+ K     GR++ + S   Q                   + + Y  S
Sbjct: 146 ----------AREAYKHLEIGGRLILMGSITGQ--------------AKAVPKHAVYSGS 181
Query: 202 KLANVLHTSELARRLKEDGVD--ITANSVHPGAITTNLFRNIS 242
           K A        AR +  D  D  IT N V PG I T+++  + 
Sbjct: 182 KGA----IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVC 220

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           +VTGAS GIG   A  L   G  V++   R+  A  EV K I  E    +      D+S 
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI--EAYGGQAITFGGDVSK 62
Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLLL 149
            A V         +   +++++NNAGI     +  + K   +     N  G FL T    
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 150 ETMGKTARESSKEGRIVNVSS 170
           + M K      ++GRI+N++S
Sbjct: 123 KIMMK-----KRKGRIINIAS 138

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL--S 90
           +VTGAS GIG E A   A  G  V++  RN    R V + I  E  + + Q   LDL   
Sbjct: 19  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQ-HVQPQWFTLDLLTC 77
Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM 119
           +    R+ A    +    L+ +++NAG++
Sbjct: 78  TAEECRQVADRIAAHYPRLDGVLHNAGLL 106

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP---NAKVQA 84
           +G  A+VTGA+ GIG   AR       H   A+  +   RE K   +KEI       V  
Sbjct: 26  TGRKALVTGATGGIGEAIARCF-----HAQGAIVGLHGTREDK---LKEIAADLGKDVFV 77
Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHF 142
              +LS   S+++ A   +     ++IL+NNAGI      +   + +     A N     
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAS 137
Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSS 170
            LT  L+ +M +      + GRI+N++S
Sbjct: 138 TLTRELIHSMMR-----RRYGRIINITS 160

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMEL 87
           G  A+VTGA  GIG E A  L  RG  V++   N   +  EV  AI K   +A      +
Sbjct: 29  GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV 88
Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
            +     VR F    K  G  L+I+ +N+G+++   +  ++ +  +  F  N  G F + 
Sbjct: 89  GVVE-DIVRMFEEAVKIFG-KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV- 145
Query: 146 NLLLETMGKTARESSKE----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
                     ARE+ K     GR++ + S   Q                   + + Y  S
Sbjct: 146 ----------AREAYKHLEIGGRLILMGSITGQ--------------AKAVPKHAVYSGS 181
Query: 202 KLANVLHTSELARRLKEDGVD--ITANSVHPGAITTNLFRNIS 242
           K A        AR +  D  D  IT N V PG I T+++  + 
Sbjct: 182 KGA----IETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVC 220

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-133
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	7e-86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-66
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-35
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-33
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-33
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-33
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-31
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-31
1spx_A	278	Short-chain reductase family member (5L265); paral	8e-31
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	9e-31
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-30
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-30
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-30
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-30
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	8e-30
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-29
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-29
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-29
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-29
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-29
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-29
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-29
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-29
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	8e-29
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	9e-29
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-28
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-28
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-28
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-28
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-28
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-28
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-28
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	7e-28
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-27
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-27
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-27
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-27
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-27
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-27
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-27
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-27
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-27
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-27
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-27
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	7e-27
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	8e-27
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-27
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	8e-27
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-26
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-26
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-26
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-26
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-26
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-26
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-26
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-26
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-26
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-26
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-26
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-26
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-26
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	5e-26
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-26
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-26
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	8e-26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-26
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-26
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-25
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-25
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-25
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-25
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-25
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-25
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-25
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-25
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-25
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-25
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-25
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-25
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-25
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-25
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	7e-25
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	8e-25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-25
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-25
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-24
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-24
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-24
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-24
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-24
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-24
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-24
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	6e-24
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-24
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	9e-24
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-23
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-23
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-23
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-23
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	5e-23
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	6e-23
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-22
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-22
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-22
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-22
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-22
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-22
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-22
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-22
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-22
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	6e-22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-22
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	7e-22
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-22
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-22
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-21
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-21
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-21
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-21
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-21
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-21
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-21
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-21
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	6e-21
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	7e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	8e-21
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	9e-21
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-20
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-20
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-20
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-20
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-20
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-20
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-20
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-20
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-20
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-20
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-20
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-19
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-19
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-19
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-19
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-19
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-19
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-19
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-19
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-19
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	7e-19
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-18
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-18
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-18
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-18
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-18
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-18
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	4e-18
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	7e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-17
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-16
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	4e-16
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-16
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	5e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	8e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-09
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	9e-13
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-11
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-05

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  379 bits (976), Expect = e-133
 Identities = 109/308 (35%), Positives = 148/308 (48%), Gaps = 31/308 (10%)

Query: 11  GFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK 70
           G  +  TA ++      +  T ++TGA+SG+G  TAR LA RG  V+MAVR+        
Sbjct: 1   GSMTGWTAADLP---SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA 57

Query: 71  KAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI 130
           + +       +V+  ELDL  L+SVR+FA          ++LINNAGIMA P+ L+ D  
Sbjct: 58  RTM-----AGQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAVPYALTVDGF 108

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           E Q  TNH+GHF LTNLLL  +           R+V VSS  H       I  + +N +S
Sbjct: 109 ESQIGTNHLGHFALTNLLLPRL---------TDRVVTVSSMAHWPG---RINLEDLNWRS 156

Query: 191 -GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGL 247
             Y+ + AY QSKLAN+L TSEL RRL   G  + A + HPG   TNL           L
Sbjct: 157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDAL 216

Query: 248 VGLLGKYVIKNVEQGAATTCYVALHP----HVKGLTGSYFADSNVAQASSQAVNTELAQK 303
           +    + V  + + GA  T Y A          G    Y   +     S +A +  +A  
Sbjct: 217 MSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAA 276

Query: 304 LWDFSSDL 311
           LW  S  L
Sbjct: 277 LWALSEQL 284

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  258 bits (661), Expect = 7e-86
 Identities = 70/295 (23%), Positives = 113/295 (38%), Gaps = 54/295 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLA-LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
               A+VTG + GIG    R L  L    VV+  R++   +   + +  E      +  +
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQ 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSK--DNIELQFATNHIGHFLL 144
           LD+  L S+R      +     L++L+NNAGI       +      E+   TN  G   +
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 120

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP-------EGIRFDRIND--------- 188
              LL  +         +GR+VNVSS     +         +  R + I +         
Sbjct: 121 CTELLPLI-------KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNK 173

Query: 189 ----------QSGYNRFSAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTN 236
                     Q      SAYG +K+   + +   AR+L E   G  I  N+  PG + T+
Sbjct: 174 FVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233

Query: 237 LFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVA-LHPHVKGLTGSYFADSNVAQ 290
           +    +              K+ E+GA T  Y+A L P  +G  G + ++  V Q
Sbjct: 234 MAGPKAT-------------KSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 275

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  209 bits (534), Expect = 3e-66
 Identities = 64/324 (19%), Positives = 111/324 (34%), Gaps = 85/324 (26%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A+VTG + GIG E  + L+  G+ VV+  R++    E  + + K   +  V   +L
Sbjct: 11  KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQL 69

Query: 88  DLSS-LASVRKFASEFKSSGLPLNILINNAGIMATPF----------------------- 123
           D++  +A++   A   K+    L+IL+NNAG+                            
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 124 ---------MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ 174
                      + +  E     N+ G   +T +L+  +       S   RIVNVSS    
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL-----SDSPRIVNVSSSTGS 184

Query: 175 FS----------------------------YPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
                                           +  + + I      +  +AY  SK    
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT 266
            +T  LA ++         N V PG + T +   I  ++              E+GA   
Sbjct: 245 AYTRVLANKIP----KFQVNCVCPGLVKTEMNYGIGNYT-------------AEEGAEHV 287

Query: 267 CYVALHPHVKGLTGSYFADSNVAQ 290
             +AL P   G +G ++  S ++ 
Sbjct: 288 VRIALFPD-DGPSGFFYDCSELSA 310

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  128 bits (325), Expect = 1e-35
 Identities = 60/225 (26%), Positives = 84/225 (37%), Gaps = 31/225 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   ++TGA  GIG  TA   A     +V+   N     E           AKV    +
Sbjct: 30  TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 87

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLT 145
           D S+   +   A + K+    ++IL+NNAG++ T          IE  F  N + HF  T
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 147

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M K     +  G IV V+S      +                   AY  SK A 
Sbjct: 148 KAFLPAMTK-----NNHGHIVTVAS---AAGH------------VSVPFLLAYCSSKFAA 187

Query: 206 V-LHTS---ELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
           V  H +   EL   L+  GV  T   + P  + T   +N S   G
Sbjct: 188 VGFHKTLTDEL-AALQITGVKTTC--LCPNFVNTGFIKNPSTSLG 229

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  122 bits (309), Expect = 2e-33
 Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 30/221 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           + +VTGA+ GIG    + L       H++   R++    E     +K I +++V  + L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 89  LSSLASVRKFASEFKS--SGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFL 143
           ++   S+  F S+         L++LINNAG++    T    ++  I  Q   N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 144 LTNLLLETMGK------TARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
           LT  LL  +          + S     ++ +SS     +             S      A
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--------GSAQFPVLA 171

Query: 198 YGQSKLA-NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           Y  SK A N+     LA  LK+D   +   +  PG + TNL
Sbjct: 172 YRMSKAAINMF-GRTLAVDLKDDN--VLVVNFCPGWVQTNL 209

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  122 bits (309), Expect = 2e-33
 Identities = 48/226 (21%), Positives = 84/226 (37%), Gaps = 34/226 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLA---LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
                ++TGAS G G   A  LA     G  ++++ R+ +  R++K+ +  + P+ KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  MELDLSSLASVRKFASE----FKSSGLPLNILINNAGIMATPFMLSKDNIELQ-----FA 135
              DL + A V++  S      +  GL   +LINNA  +        +  +L      +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
            N      LT+  L     +   S     +VN+SS               +     Y  +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPGLS---KTVVNISS---------------LCALQPYKGW 166

Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             Y   K A       L + L  +   +   S  PG +  ++ +  
Sbjct: 167 GLYCAGK-AARDM---LYQVLAAEEPSVRVLSYAPGPLDNDMQQLA 208

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  120 bits (303), Expect = 9e-33
 Identities = 44/218 (20%), Positives = 72/218 (33%), Gaps = 32/218 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           S    IVTGA SG+G      L  RG  V M  R     ++ +  +        V  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVA 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLT 145
           DL+    V    +     G    ++++ AG     P    + + I     +N +   L+ 
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  +     E    G + NV S                  Q G    S Y  SK   
Sbjct: 117 QQTVRLI----GERG--GVLANVLS---------------SAAQVGKANESLYCASKWG- 154

Query: 206 VLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +    E L   LK+    +   +++P  I +  + N  
Sbjct: 155 MRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNTD 190

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  118 bits (297), Expect = 1e-31
 Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 26/215 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDL 89
            AI+TGAS GIG   A  LA  G  VV+  R+     +V   I++      +   + LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           +          +       ++IL+N A +          DN       N I  + +   +
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV 128

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            E M        K G I NV+SR  ++ + +G                 YG +K A +L 
Sbjct: 129 TEIMKV-----QKNGYIFNVASRAAKYGFADG---------------GIYGSTKFA-LLG 167

Query: 209 TSE-LARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            +E L R L   G  I   ++ PG + T++ +   
Sbjct: 168 LAESLYRELAPLG--IRVTTLCPGWVNTDMAKKAG 200

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  117 bits (296), Expect = 3e-31
 Identities = 49/215 (22%), Positives = 78/215 (36%), Gaps = 24/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   IVTGAS GIG E A  LA  G HVV+  R+    ++V      E+  A    +  
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAG 85

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLT 145
            +  +    +F ++       L++LI N     +         ++      N + + +LT
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 145

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  + +        G IV VSS   + +YP                 +AY  SK A 
Sbjct: 146 VAALPMLKQ------SNGSIVVVSSLAGKVAYP---------------MVAAYSASKFAL 184

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
               S + +      V+++      G I T     
Sbjct: 185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 219

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  116 bits (292), Expect = 8e-31
 Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 29/221 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           +   AI+TG+S+GIG  TA + A  G  V +  R+     E ++ I+   +    V ++ 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI------MATPFMLSKDNIELQFATNHIG 140
            D+++ A   +  S        L+IL+NNAG         T    S ++ +     N   
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
              LT   +  +  T       G IVN+S      S   G+             F  Y  
Sbjct: 125 VIALTKKAVPHLSSTK------GEIVNIS------SIASGLH--------ATPDFPYYSI 164

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +K A   +T   A  L + G  I  NS+ PG + T     +
Sbjct: 165 AKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAM 203

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  115 bits (291), Expect = 9e-31
 Identities = 42/210 (20%), Positives = 74/210 (35%), Gaps = 25/210 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VT  SSG+G  +A  LA  G  +++  RN          I   +  A+V  +  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+     + +   + +  G   +IL+ + G      FM L  ++ +  +         + 
Sbjct: 66  DIREPGDIDRLFEKARDLG-GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVG 124

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
               E M +        GR+V + S               +     +   +     +L  
Sbjct: 125 RRAAEQMVE-----KGWGRMVYIGS---------------VTLLRPWQDLALSNIMRLPV 164

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           +     LA  L   G  +T N+V P  I T
Sbjct: 165 IGVVRTLALELAPHG--VTVNAVLPSLILT 192

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  115 bits (291), Expect = 1e-30
 Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 28/210 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTG+++GIG   A  L   G +V++  R      E  K I  + P+A +Q +  
Sbjct: 9   KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA 68

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL +    +    ++      ++ILINN GI     +  +  ++    F  N +    LT
Sbjct: 69  DLGTEQGCQDVIEKYPK----VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLT 124

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L+ M +      KEGR++ ++S                         + Y  +K   
Sbjct: 125 RSYLKKMIE-----RKEGRVIFIAS---------------EAAIMPSQEMAHYSATKTMQ 164

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           +  +  LA         +T N++ PG+  T
Sbjct: 165 LSLSRSLAELTTGTN--VTVNTIMPGSTLT 192

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  114 bits (288), Expect = 2e-30
 Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 33/222 (14%)

Query: 31  TAIVTGASSGIGTETARVLAL---RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           + ++TG + G+G    + L        H+    RN    +E++        ++ +  +E+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEI 79

Query: 88  DLSSLASVRKFASEFKSS--GLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHF 142
           DL +  +  K  ++ +       LN+L NNAGI    A    +    +     TN +   
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 143 LLTNLLLETMGK------TARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           +L    L  + K      +         I+N+SS                N   G     
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ---------GNTDGGM---Y 187

Query: 197 AYGQSKLA-NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           AY  SK A N   T  L+  L      I   S+HPG + T++
Sbjct: 188 AYRTSKSALNAA-TKSLSVDLYPQR--IMCVSLHPGWVKTDM 226

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  115 bits (289), Expect = 3e-30
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 27/239 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           SG + I+TG+S+GIG   A + A  G  V +  RN     E K+ I+K  +P  K+ A+ 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML----SKDNIELQFATNHIGHF 142
            D++  +      +   +    ++IL+NNAG              +  +  F  N     
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            +T    E + KT       G IVNVSS               +     ++ +  Y  +K
Sbjct: 145 EMTQKTKEHLIKTK------GEIVNVSS--------------IVAGPQAHSGYPYYACAK 184

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ 261
            A   +T   A  L + G  +  NSV PGA+ T     +         L  ++    E 
Sbjct: 185 AALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC 241

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  114 bits (287), Expect = 4e-30
 Identities = 48/210 (22%), Positives = 85/210 (40%), Gaps = 25/210 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A++TG+SSGIG   A   A  G H+V+  R +    E  +++ ++    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAV 64

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+++   V       +SS    +IL+NNAG       M  + +  +  +    +    L 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L+  M          G I++ +S               I           Y  +K A 
Sbjct: 125 RGLVPGMRA-----RGGGAIIHNAS---------------ICAVQPLWYEPIYNVTKAAL 164

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           ++ +  LA  + +D   I  N ++PG I T
Sbjct: 165 MMFSKTLATEVIKDN--IRVNCINPGLILT 192

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  114 bits (287), Expect = 8e-30
 Identities = 53/250 (21%), Positives = 95/250 (38%), Gaps = 22/250 (8%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA VTG ++G+G    R L  +G  V +A     +  +    +  E    +V  ++L
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D++S    +  A E ++   P++IL NNAG+     +   S D+ +     N  G     
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 146 NLLLETMGKTARESS-KEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              +  M +  +    K G +VN +S     ++                    Y  +K A
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTAS---MAAF------------LAAGSPGIYNTTKFA 171

Query: 205 NVLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA 263
            V   SE L   L +    I  + + PG + + ++ +       +    K V K   +  
Sbjct: 172 -VRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL 228

Query: 264 ATTCYVALHP 273
           A      + P
Sbjct: 229 AGVHEFGMEP 238

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  113 bits (284), Expect = 1e-29
 Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 37/226 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           S  T I+TG+S+GIG  TA + A  G +V +  R+     E ++ I+K  +   +V ++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 87  LDLSSLASVRKFASE----FKSSGLPLNILINNAGI-MATPFMLSKDNIELQ-----FAT 136
            D+++     +  +     F      +++L+NNAG  +   F  +  +  +         
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGK----IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N      +T  +   +  +       G IVNVSS         G +            F 
Sbjct: 121 NLQAVIEMTKKVKPHLVASK------GEIVNVSSIVA------GPQ--------AQPDFL 160

Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            Y  +K A   +T   A  L + G  I  NSV PG + T     + 
Sbjct: 161 YYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMG 204

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  112 bits (283), Expect = 1e-29
 Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 24/227 (10%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
           S ++T +     +   G  A++TGA+ GIG + AR  A  G  +V++ R+++     ++A
Sbjct: 4   SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA 63

Query: 73  IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNI 130
           + ++     V  + +DL+   +  + A     +   L++L+NNAGI    P +       
Sbjct: 64  LGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLF 122

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           +   A N     LL + + + M      + + G I+ V+S                   +
Sbjct: 123 DATIAVNLRAPALLASAVGKAM----VAAGEGGAIITVAS---------------AAALA 163

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                 AY  SK   V+ T  LAR L   G  I ANSV P  + T +
Sbjct: 164 PLPDHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEM 208

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  112 bits (282), Expect = 2e-29
 Identities = 44/211 (20%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           S   A+VTG SSGIG  T  +L   G  V    R+    R  + A+ +  P A++ A   
Sbjct: 7   SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+     VR FA   + +    +IL+NNAG    + F   + +    +            
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  +         +  IV V+S               +          A   ++ A 
Sbjct: 127 RAFLPQLES-----RADAAIVCVNS---------------LLASQPEPHMVATSAAR-AG 165

Query: 206 VLH-TSELARRLKEDGVDITANSVHPGAITT 235
           V +    +A      G  +  N +  G + +
Sbjct: 166 VKNLVRSMAFEFAPKG--VRVNGILIGLVES 194

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  111 bits (280), Expect = 2e-29
 Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 33/212 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SGL A+VTGA  GIG +T + L   G  VV   R  +    + K          ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCV 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           DL    +  K          P+++L+NNA ++   PF+ ++K+  +  F+ N    F ++
Sbjct: 60  DLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            ++   M          G IVNVSS               +     +     Y  +K A 
Sbjct: 116 QMVARDM----INRGVPGSIVNVSS---------------MVAHVTFPNLITYSSTKGAM 156

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            + T  +A  L      I  NSV+P  + T++
Sbjct: 157 TMLTKAMAMELGPHK--IRVNSVNPTVVLTDM 186

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  111 bits (280), Expect = 3e-29
 Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 33/212 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA  GIG  T + L   G  VV   R  A    + +          ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCV 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           DL    +  +          P+++L+NNA +    PF+ ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            ++   +          G IVNVSS                  Q      S Y  +K A 
Sbjct: 116 QIVARGL----IARGVPGAIVNVSS---------------QCSQRAVTNHSVYCSTKGAL 156

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            + T  +A  L      I  N+V+P  + T++
Sbjct: 157 DMLTKVMALELGPHK--IRVNAVNPTVVMTSM 186

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  112 bits (282), Expect = 3e-29
 Identities = 46/221 (20%), Positives = 78/221 (35%), Gaps = 25/221 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG +SGIG  TA   A RG  +V++  +  A  +    +  +        +  
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D+  L  + + A E       ++++ +NAGI+    +  ++ D+       +  G     
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  +     E    G I   +S                           YG +K   
Sbjct: 148 EAFLPRL----LEQGTGGHIAFTASFAGLVPNAG---------------LGTYGVAKYGV 188

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
           V     LAR +K +G  I  + + P  + T L  N     G
Sbjct: 189 VGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRG 227

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  110 bits (278), Expect = 4e-29
 Identities = 39/214 (18%), Positives = 63/214 (29%), Gaps = 26/214 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           T  V GA   IG E A+  A  G  V    RN      +   I       ++ A  LD  
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDAR 66

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNLL 148
           +   V  F +   +   PL + I N G     P +  +       +       F+     
Sbjct: 67  NEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRES 125

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
              M         +G+I    +                    G + F+A+  +K      
Sbjct: 126 ARLMLA-----HGQGKIFFTGA---------------TASLRGGSGFAAFASAKFGLRAV 165

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
              +AR L    +   A+ +    + T   R   
Sbjct: 166 AQSMARELMPKNI-HVAHLIIDSGVDTAWVRERR 198

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  111 bits (279), Expect = 5e-29
 Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 25/213 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AI+TGA +GIG E A   A  G  VV++  N  A   V   I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDNIELQFATNHIGHFLLTN 146
           D++S   +   A    S    ++IL+NNAG     PF +   +    +  N    F L+ 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L+   M K     +  G I+ ++S               +  ++     ++Y  SK A  
Sbjct: 128 LVAPEMEK-----NGGGVILTITS---------------MAAENKNINMTSYASSKAAAS 167

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
                +A  L E    I  N + PGAI T+  +
Sbjct: 168 HLVRNMAFDLGEKN--IRVNGIAPGAILTDALK 198

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  109 bits (274), Expect = 8e-29
 Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 43/217 (19%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           +  ++TGA+ G+G   AR  AL+G  ++++ R   A  E+ + +         +A+  DL
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLTNL 147
           +     +    E    G PL++L++  G           +D +E   A +     L    
Sbjct: 52  ADELEAKALLEEA---G-PLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAF 103

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +L+      +   K  R V   +                        F+AY  +K A + 
Sbjct: 104 VLKHA--RFQ---KGARAVFFGA---------------YPRYVQVPGFAAYAAAKGA-LE 142

Query: 208 HTSE-LARRLKEDGVDITANSVHPGAITTNLFRNISF 243
              E   + L  +GV +    V   A+ T L+  +  
Sbjct: 143 AYLEAARKELLREGVHLVL--VRLPAVATGLWAPLGG 177

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  109 bits (275), Expect = 9e-29
 Identities = 42/213 (19%), Positives = 83/213 (38%), Gaps = 28/213 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A++TGAS GIG   AR LA  G  + +  R++    ++   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-QGVEVFYHHLDVS 62

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              SV +F+ +       +++++ NAG+     +  LS++        N +G +      
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L+++     + +    +V  S    +   P G                 Y  +K A    
Sbjct: 123 LDSL-----KRTGGLALVTTSDVSAR-LIPYG---------------GGYVSTKWA-ARA 160

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                 +++   V      + PGA+ T    + 
Sbjct: 161 LVR-TFQIENPDVRFF--ELRPGAVDTYFGGSK 190

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  109 bits (274), Expect = 1e-28
 Identities = 40/211 (18%), Positives = 72/211 (34%), Gaps = 35/211 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TGASSG+G E A++    G    +  R+ +    V   +     +  V     DL+
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLA 57

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMAT-PFM-LSKDNIELQFATNHIGHFLLTNLL 148
           S   V +   +  S     + ++++AG            + I+     N      +   L
Sbjct: 58  SHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           ++          +   +V + S   Q    +                S Y   K A V  
Sbjct: 115 VKRYKD------QPVNVVMIMSTAAQQPKAQE---------------STYCAVKWA-VKG 152

Query: 209 TSE-LARRLKEDGVDITANSVHPGAITTNLF 238
             E +   LK   + I A  V+PG + T  +
Sbjct: 153 LIESVRLELKGKPMKIIA--VYPGGMATEFW 181

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  109 bits (275), Expect = 1e-28
 Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 46/272 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVM--AVRNMAACREVKKAIVKEIPNAKVQAME 86
           G   +VTG S GIG     VL       V+    R+ A  +++K+         +   + 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVV 56

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMA--TPFM-LSKDNIELQFATNHIGHFL 143
            D++  + +++  +        ++ L+ NAG++        +  +  +  +  N      
Sbjct: 57  GDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVS 116

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           L  + L  + KT       G +V VSS                     ++ + AYG SK 
Sbjct: 117 LVGIALPELKKTN------GNVVFVSS---------------DACNMYFSSWGAYGSSK- 154

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK------ 257
           A + H    A  L  +   + A +V PG + T++  NI    G   +  + +        
Sbjct: 155 AALNH---FAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE 211

Query: 258 -----NVEQGAATTCYVALHPHVKGLTGSYFA 284
                +    A     +ALH    G+ G Y +
Sbjct: 212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLS 243

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  109 bits (275), Expect = 2e-28
 Identities = 57/213 (26%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     E  +   ++     V+    
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 88  DLSSLASVRKFASEFKSS-GLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLL 144
           DL S     K            LNIL+NNAG+ +       ++ +  +   TN    + L
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           + +    +       S+ G ++ +SS               I   S     S Y  SK A
Sbjct: 138 SQIAYPLLKA-----SQNGNVIFLSS---------------IAGFSALPSVSLYSASKGA 177

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
               T  LA    +D   I  NSV PG I T L
Sbjct: 178 INQMTKSLACEWAKDN--IRVNSVAPGVILTPL 208

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  109 bits (274), Expect = 2e-28
 Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 35/220 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    I   A  GIG +T+R L  R +   + +  +         +    P   +     
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-PTALAELKAINPKVNITFHTY 62

Query: 88  DLS-SLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHF 142
           D++  +A  +K       + K+    ++ILIN AGI+          IE   A N  G  
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKT----VDILINGAGIL------DDHQIERTIAINFTGLV 112

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
             T  +L+   K  R+    G I N+ S               +   +  ++   Y  SK
Sbjct: 113 NTTTAILDFWDK--RKGGPGGIIANICS---------------VTGFNAIHQVPVYSASK 155

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            A V  T+ LA+     G  +TA S++PG   T L    +
Sbjct: 156 AAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFN 193

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  109 bits (274), Expect = 2e-28
 Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 31/218 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AIV G + G+G  T R L   G  V++  RN +    +++         +V A+  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRS 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++ L  +    +    +   +++L  NAG+    PF  +S+ + + QFA N  G F   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L   +        + G IV  SS               + D+ G+   S Y  SK A 
Sbjct: 122 QRLTPLIR-------EGGSIVFTSS---------------VADEGGHPGMSVYSASKAAL 159

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
           V   S LA  L   G  I  NSV PG I T        
Sbjct: 160 VSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGI 195

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  108 bits (272), Expect = 4e-28
 Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 26/217 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA-KVQAME 86
            G  AI+TG + GIG   A      G  V++  R+     +      K +    ++Q  +
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA----AKSVGTPDQIQFFQ 60

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLL 144
            D S      K     + +  P++ L+NNAGI    +    +        A N  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T L ++ M    +       I+N+SS        EG          G     AY  SK A
Sbjct: 121 TRLGIQRM----KNKGLGASIINMSSI-------EGFV--------GDPSLGAYNASKGA 161

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             + +   A        D+  N+VHPG I T L  ++
Sbjct: 162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  108 bits (272), Expect = 5e-28
 Identities = 53/216 (24%), Positives = 79/216 (36%), Gaps = 29/216 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG T I+TG + G+G E AR     G  VV+A               +E+     +   L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT----AREL-GDAARYQHL 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++     ++  +  +     ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             ++  M       +  G IVN+SS         G+         G    S+YG SK   
Sbjct: 119 KTVIPAMKD-----AGGGSIVNISSA-------AGLM--------GLALTSSYGASKWGV 158

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              +   A  L  D   I  NSVHPG   T +    
Sbjct: 159 RGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAET 192

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  108 bits (271), Expect = 5e-28
 Identities = 37/218 (16%), Positives = 75/218 (34%), Gaps = 36/218 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A+VTGA+ G+G E  + L+   +   +         E   A+ +      V+ +E 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIES 55

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D+           + K+    ++ L++ A +   T     S          N I    L+
Sbjct: 56  DIVKEVLEEGGVDKLKNLD-HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELS 114

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             LL  +       +  G ++ ++S      +P                 + Y  SK A 
Sbjct: 115 RQLLPAL------RAASGCVIYINSGAGNGPHPGN---------------TIYAASKHA- 152

Query: 206 VLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +   ++   +    +G  I  ++V PG   T + + + 
Sbjct: 153 LRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGLM 188

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  108 bits (271), Expect = 7e-28
 Identities = 45/217 (20%), Positives = 85/217 (39%), Gaps = 28/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    +++G    +GT  AR  A +G  +V+A R +    +V K +       +  ++  
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGT 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D++  A V     E   +   ++++INNA  +    PF   + +++         G   L
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  + ++       G +VNV+S               +  +    ++ AY  +K A
Sbjct: 128 IQGFTPALEESK------GAVVNVNS---------------MVVRHSQAKYGAYKMAKSA 166

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            +  +  LA  L E G  I  NSV PG I     ++ 
Sbjct: 167 LLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKSY 201

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  107 bits (270), Expect = 1e-27
 Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 35/221 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTGA+ GIG   A  L L+G  V +   N+ A  + K A+ ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D++    +R    +       L+IL+NNAG+       ++ N E     N +     T L
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 119

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            L+ M K  +   + G I+N+SS               +       +   Y  SK   V 
Sbjct: 120 GLDYMSK--QNGGEGGIIINMSS---------------LAGLMPVAQQPVYCASKHGIVG 162

Query: 208 HT------SELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            T      + L          +  N++ PG + T +  +I 
Sbjct: 163 FTRSAALAANLMNS------GVRLNAICPGFVNTAILESIE 197

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  107 bits (270), Expect = 1e-27
 Identities = 53/213 (24%), Positives = 73/213 (34%), Gaps = 27/213 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              T +VTG + GIG       A  G  +    RN     E      K+    +V     
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVC 70

Query: 88  DLSSLASVRKFASEFKSS-GLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLL 144
           D S      K      S  G  L+ILINN G   + P +  + ++     +TN    + L
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           + L    +       S  G I+ +SS               I      +  S Y  +K A
Sbjct: 131 SQLAHPLLKA-----SGCGNIIFMSS---------------IAGVVSASVGSIYSATKGA 170

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                  LA     DG  I AN+V P  I T L
Sbjct: 171 LNQLARNLACEWASDG--IRANAVAPAVIATPL 201

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  107 bits (269), Expect = 2e-27
 Identities = 43/213 (20%), Positives = 72/213 (33%), Gaps = 31/213 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A++TGA+SGIG   A+     G  V +  R           I           ++ D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSA 85

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLTNLL 148
           +LA + +   + K+    +++L  NAG     P   ++++  +  F  N  G        
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKA 145

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  +        +   +V   S                   +G   FS Y  SK A    
Sbjct: 146 LPLLA-------RGSSVVLTGS---------------TAGSTGTPAFSVYAASKAALRSF 183

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                  LK+ G  I  N++ PG   T     +
Sbjct: 184 ARNWILDLKDRG--IRINTLSPGPTETTGLVEL 214

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  106 bits (267), Expect = 2e-27
 Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 29/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TGASSGIG  TAR LA  G  V +A R +   R +   +      AKV  +EL
Sbjct: 6   QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLEL 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D++    V    +    +   L+IL+NNAGIM    +      +      TN +G   +T
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMT 123

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  + +       +G +V +SS   + +                   + Y  +K   
Sbjct: 124 RAALPHLLR------SKGTVVQMSSIAGRVNVRNA---------------AVYQATKFG- 161

Query: 206 VLHTSELARR-LKEDGVDITANSVHPGAITTNLFRNISF 243
           V   SE  R+ + E GV +    + PG   T L  +I+ 
Sbjct: 162 VNAFSETLRQEVTERGVRVV--VIEPGTTDTELRGHITH 198

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  106 bits (267), Expect = 2e-27
 Identities = 43/217 (19%), Positives = 83/217 (38%), Gaps = 28/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G +A++TG++ GIG   A      G  V +A  ++   R+    I          A+++
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQM 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++   S+    +        L+IL+NNA +    P + +++++ E  FA N  G     
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 M        + G+I+N++S                  + G    + Y  +K A 
Sbjct: 122 QAAARQM----IAQGRGGKIINMAS---------------QAGRRGEALVAIYCATKAAV 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +  T      L +    I  N++ PG +    +  + 
Sbjct: 163 ISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDGVD 197

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  106 bits (267), Expect = 2e-27
 Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 25/209 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +   AIVTGA++GIG   A   A  G  VV+          V  AI +     K   +E 
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLEC 68

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDNIELQFATNHIGHFLLTN 146
           +++                  + +L+NNAG     PF +   + E  F  N    F L+ 
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ 128

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L    M K     +  G I+N+SS               +  ++   R ++YG SK A  
Sbjct: 129 LAAPHMQK-----AGGGAILNISS---------------MAGENTNVRMASYGSSKAAVN 168

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITT 235
             T  +A  +   G  I  N++ PGAI T
Sbjct: 169 HLTRNIAFDVGPMG--IRVNAIAPGAIKT 195

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  106 bits (267), Expect = 2e-27
 Identities = 57/213 (26%), Positives = 84/213 (39%), Gaps = 27/213 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     +       +    KV+A   
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 88  DLSSLASVRKFASEFKSSGL-PLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLL 144
           DLSS +  ++  +   +     LNIL+NNAGI +       + ++  L  + N    + L
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           + L    +       S+ G +V +SS               ++        + YG +K A
Sbjct: 126 SVLAHPFLKA-----SERGNVVFISS---------------VSGALAVPYEAVYGATKGA 165

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
               T  LA    +D   I  N V PG I T+L
Sbjct: 166 MDQLTRCLAFEWAKDN--IRVNGVGPGVIATSL 196

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  106 bits (266), Expect = 3e-27
 Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 28/213 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTG +SG+G E  ++L   G  V  +  N AA +++      E+   +   +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL----AAEL-GERSMFVRHDVS 62

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           S A      +  +     LN+L+NNAGI           ++       N    F+     
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           +  M    +E+   G I+N++S                       +++ Y  SK A    
Sbjct: 123 IAAM----KETG--GSIINMASV-------SSWL--------PIEQYAGYSASKAAVSAL 161

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           T   A   ++ G  I  NS+HP  I T + +  
Sbjct: 162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS 194

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  106 bits (267), Expect = 3e-27
 Identities = 56/263 (21%), Positives = 98/263 (37%), Gaps = 32/263 (12%)

Query: 8   GASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR 67
             S   +SS   + ++ + G    A+ TGA  GIG   A  L  RG  VV+   N  +  
Sbjct: 2   APSADITSSGPSDASKPLAGK--VALTTGAGRGIGRGIAIELGRRGASVVV---NYGSSS 56

Query: 68  EVKKAIVKEIPNA--KVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM 124
           +  + +V E+     +  A++ D+S  + V     +  S    L+ +++N+G+      +
Sbjct: 57  KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL 116

Query: 125 -LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF 183
            ++++  +  F  N  G F +    L+   +        GRI+  SS     +       
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-------GRIILTSSIAAVMTGIPN--- 166

Query: 184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
                       + Y  SK A        A      G  +T N + PG + T++F   S+
Sbjct: 167 -----------HALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSW 213

Query: 244 FSGLVGLLGKYVIKNVEQGAATT 266
                G  G    K  E  A   
Sbjct: 214 HYAPGGYKGMPQEKIDEGLANMN 236

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  106 bits (266), Expect = 4e-27
 Identities = 55/220 (25%), Positives = 81/220 (36%), Gaps = 35/220 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
            G  A+VTGAS GIG   A+ LA  G  V +          E    I          ++ 
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIG 63

Query: 87  LDLSSLASVRKFASEFKSSGLP------LNILINNAGIMA-TPFM-LSKDNIELQFATNH 138
            +L SL  V    S   +           +ILINNAGI         ++   +   + N 
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 123

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              F +    L  +           RI+N+SS   + S P             +    AY
Sbjct: 124 KAPFFIIQQALSRLR-------DNSRIINISSAATRISLP------------DF---IAY 161

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF 238
             +K A    T  LA++L   G  IT N++ PG + T++ 
Sbjct: 162 SMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMN 199

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  104 bits (263), Expect = 6e-27
 Identities = 42/216 (19%), Positives = 69/216 (31%), Gaps = 39/216 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    +VTG S GIG     +L     H V+ +            I +      ++ ++ 
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKA 51

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL+    +       K+     + +  NAGI+       +  ++I+     N        
Sbjct: 52  DLTKQQDITNVLDIIKNVS--FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             L   +            IV   S                          AY  SK A 
Sbjct: 110 KGLENNLK-------VGASIVFNGS---------------DQCFIAKPNSFAYTLSKGAI 147

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T  LA  L +    I  N+V PG + T+L+RN+
Sbjct: 148 AQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRNL 181

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  105 bits (264), Expect = 7e-27
 Identities = 52/217 (23%), Positives = 79/217 (36%), Gaps = 26/217 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A++TGA SG G   A+  A  G  VV+  R+ A    V   I          A+  
Sbjct: 8   EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAA 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPF-MLSKDNIELQFATNHIGHFLL 144
           D+S  A V        S    ++IL+NNAGI        ++  +  +     N  G +L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T+ L+    +      +E  I+NV+S                         + Y  +K  
Sbjct: 123 TSKLIPHFKE-NGAKGQECVILNVAS---------------TGAGRPRPNLAWYNATKGW 166

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V  T  LA  L      I   +++P A  T L    
Sbjct: 167 VVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTF 201

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  105 bits (264), Expect = 7e-27
 Identities = 45/233 (19%), Positives = 77/233 (33%), Gaps = 31/233 (13%)

Query: 5   SSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA 64
           SS      SS          +  S    ++TGAS  +G   A  L   G  V+++ R   
Sbjct: 3   SSHHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRT-- 60

Query: 65  ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPF 123
                + A V E+  A   A+  D S    +  F    K+    L  +++NA   +A   
Sbjct: 61  -----EHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETP 115

Query: 124 MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF 183
               DN    F+ + +  +L+       +       S+   IV++S              
Sbjct: 116 GEEADNFTRMFSVHMLAPYLINLHCEPLLTA-----SEVADIVHISD------------- 157

Query: 184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
                + G ++  AY  +K      T   A R       +  N + P  +   
Sbjct: 158 --DVTRKGSSKHIAYCATKAGLESLTLSFAARF---APLVKVNGIAPALLMFQ 205

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  104 bits (262), Expect = 8e-27
 Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 32/215 (14%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TGAS GIG  TAR+L  +G  V +  R+        +A+  E+  A    +  D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL----QALAAELEGA--LPLPGDVR 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
                 +  +  + +   L+ L+NNAG+     +  L+ +   L   TN  G FL     
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           +  +          G IVNV S   +  +  G               +AY  SK   +L 
Sbjct: 121 VPAL-----LRRGGGTIVNVGSLAGKNPFKGG---------------AAYNASKFG-LLG 159

Query: 209 TSELARR-LKEDGVDITANSVHPGAITTNLFRNIS 242
            +  A   L+E  V +   +V PG++ T    N  
Sbjct: 160 LAGAAMLDLREANVRVV--NVLPGSVDTGFAGNTP 192

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  105 bits (264), Expect = 8e-27
 Identities = 47/217 (21%), Positives = 76/217 (35%), Gaps = 31/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A+VT ++ GIG   AR LA  G HVV++ R           +  E     V     
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVC 70

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM-----LSKDNIELQFATNHIGHF 142
            +       +  +   +    ++IL++NA +   PF       +++  +     N     
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAV--NPFFGNIIDATEEVWDKILHVNVKATV 128

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L+T  ++  M K        G ++ VSS               +     +     Y  SK
Sbjct: 129 LMTKAVVPEMEK-----RGGGSVLIVSS---------------VGAYHPFPNLGPYNVSK 168

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            A +  T  LA  L      I  N + PG I TN  +
Sbjct: 169 TALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQ 203

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  105 bits (264), Expect = 8e-27
 Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 25/217 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    ++TG  SG+G  TA  LA  G  + +   +       K A+++  P+A+V     
Sbjct: 12  TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 71

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D+S  A V  + +        ++   NNAGI     P    +    +   + N  G FL 
Sbjct: 72  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              +L+ M +        G +VN +S               +    G    S Y  +K  
Sbjct: 132 LEKVLKIMRE-----QGSGMVVNTAS---------------VGGIRGIGNQSGYAAAKHG 171

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V  T   A      G  I  N++ PGAI T +  N 
Sbjct: 172 VVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENS 206

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  104 bits (263), Expect = 1e-26
 Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 32/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTG   GIG    R     G  VV+  ++ +  R +     +E+P A    +  
Sbjct: 8   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL----EQELPGA--VFILC 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHIGHFLL 144
           D++    V+   SE       L+ ++NNAG    P      S          N +G + L
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T L L  + K+       G ++N+SS         G          G  +   Y  +K A
Sbjct: 122 TKLALPYLRKSQ------GNVINISSL-------VGAI--------GQAQAVPYVATKGA 160

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
               T  LA      G  +  N + PG I T L+  +
Sbjct: 161 VTAMTKALALDESPYG--VRVNCISPGNIWTPLWEEL 195

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  104 bits (263), Expect = 1e-26
 Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 27/233 (11%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
           SS    ++       SG  A+VTGAS GIG   AR L   G  VV+  R++   R V++ 
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE 72

Query: 73  IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDN 129
           IV      + ++   DLS   ++  FA+   ++    ++L+NNAG+     P   +    
Sbjct: 73  IVAA--GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAE 130

Query: 130 IELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
            +   A N    +LL       M       +K G I+N+SS               +  +
Sbjct: 131 WDALIAVNLKAPYLLLRAFAPAMIA-----AKRGHIINISS---------------LAGK 170

Query: 190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +     +AY  SK       +  A  L++    +  + V PG++ T     +S
Sbjct: 171 NPVADGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGLS 221

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  104 bits (262), Expect = 1e-26
 Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 27/218 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                IVTGA SGIG   A+  AL    VV          ++ + +       +V  ++ 
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKA 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D+S    V +F      +   +++L NNAGIM   TP   +S +  E   A N    F  
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           +  ++  M K       +G IVN +S               I    G    + Y  +K  
Sbjct: 124 SRAVIPIMLK-----QGKGVIVNTAS---------------IAGIRGGFAGAPYTVAKHG 163

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            +  T  +A    + G  I A +V PG + TN+    S
Sbjct: 164 LIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSS 199

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  104 bits (261), Expect = 1e-26
 Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 25/214 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGA  GIG   A  L   G  V +A  N A  + V   I +        A+++D+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLTNLL 148
               V     + + +    ++++NNAG+  +TP   ++ + ++  +  N  G        
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           +E      ++    G+I+N  S                    G    + Y  SK A    
Sbjct: 122 VEAF----KKEGHGGKIINACS---------------QAGHVGNPELAVYSSSKFAVRGL 162

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           T   AR L   G  IT N   PG + T ++  I 
Sbjct: 163 TQTAARDLAPLG--ITVNGYCPGIVKTPMWAEID 194

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  104 bits (262), Expect = 2e-26
 Identities = 50/218 (22%), Positives = 74/218 (33%), Gaps = 28/218 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               AIVTGA SG+G   A  LA  G  V +A R + A +E    I           +  
Sbjct: 27  GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPT 81

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML---SKDNIELQFATNHIGHFLL 144
           D++   SVR   +        +++L NNAG  A    +   +    +    TN  G FL 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T      M          GRI+N  S               I+  S     + Y  +K A
Sbjct: 142 TQEAFRVMKAQEPRG---GRIINNGS---------------ISATSPRPYSAPYTATKHA 183

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
               T   +   +     I    +  G   T + + + 
Sbjct: 184 ITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKMK 219

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  104 bits (262), Expect = 2e-26
 Identities = 60/217 (27%), Positives = 87/217 (40%), Gaps = 26/217 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
                +VTG S GIG    R+ A +G  V +    N  A   V  AI +     +  A+ 
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIP 82

Query: 87  LDLSSLASVRK-FASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHF 142
            D+ + A +   F++  +  G  L+ L+NNAGI+        +S + IE     N  G  
Sbjct: 83  GDVGNAADIAAMFSAVDRQFG-RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI 141

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L     +  M +    S + G IVNVSS                       ++  Y  SK
Sbjct: 142 LCAAEAVRRMSR--LYSGQGGAIVNVSSMAAILGSA--------------TQYVDYAASK 185

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            A    T  LAR +  +G  I  N+V PG I T+L  
Sbjct: 186 AAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHA 220

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  104 bits (261), Expect = 2e-26
 Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 29/216 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+V+G + G+G    R +   G  VV         + +      E+     + + L
Sbjct: 6   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM----AAELA-DAARYVHL 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  A  +       ++   L++L+NNAGI  + T    +    +     N  G FL  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +++ M +     +  G I+N+SS        EG+         G      Y  +K A 
Sbjct: 121 RAVVKPMKE-----AGRGSIINISSI-------EGLA--------GTVACHGYTATKFAV 160

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T   A  L   G  I  NS+HPG + T +   +
Sbjct: 161 RGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWV 194

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  103 bits (260), Expect = 2e-26
 Identities = 54/216 (25%), Positives = 76/216 (35%), Gaps = 28/216 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            AIVTGASSG G   A     RG  V     +     E  +         KV  +  D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVA 62

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM----ATPFM-LSKDNIELQFATNHIGHFLLT 145
               V    +        +++L+NNAGI     A        +  +   A N  G FL  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +L  M          G IVN++S               +     +   SAY  SK A 
Sbjct: 123 RAVLPHMLL-----QGAGVIVNIAS---------------VASLVAFPGRSAYTTSKGAV 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +  T  +A      G  I  N+V PG I T + +  
Sbjct: 163 LQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQWR 196

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  104 bits (262), Expect = 2e-26
 Identities = 57/213 (26%), Positives = 82/213 (38%), Gaps = 24/213 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+VTG S GIG   A+ L   G  V +  R+  AC +    +         QA+  
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAIPA 84

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           DLSS A  R+ A         L+IL+NNAG               E     N    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             LL  + ++A       R++N+ S         GI       +  Y    AYG SK A 
Sbjct: 145 QQLLPLLRRSASA-ENPARVINIGSV-------AGI---SAMGEQAY----AYGPSK-AA 188

Query: 206 VLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
           +   +  LA+ L  +   I  N + PG   + +
Sbjct: 189 LHQLSRMLAKELVGEH--INVNVIAPGRFPSRM 219

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  104 bits (262), Expect = 2e-26
 Identities = 45/219 (20%), Positives = 73/219 (33%), Gaps = 28/219 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA-KVQAME 86
              T +VTG  SGIG   A  L   G  V++  RN        + +     N   ++   
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFM-LSKDNIELQFATNHIGHFL 143
            D+++     +      +    L+ +++ AG      P   +  +        N  G   
Sbjct: 70  TDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMY 129

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +       M +        G  V +SS               I   + +  F AYG +K 
Sbjct: 130 VLKHAAREMVR-----GGGGSFVGISS---------------IAASNTHRWFGAYGVTK- 168

Query: 204 ANVLH-TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           + V H     A  L      +  NS+ PG I T+L   I
Sbjct: 169 SAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAAI 205

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  103 bits (260), Expect = 2e-26
 Identities = 51/214 (23%), Positives = 85/214 (39%), Gaps = 28/214 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             ++TGAS GIG   AR L + G  +++  R  A    +   I          A  LD++
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVT 63

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
              SV  FA     +   +++L+NNAG+M    +  +  D  E     N  G       +
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M     E+ + G+I+N+ S       P                 + Y  +K A V  
Sbjct: 124 LPIM-----EAQRSGQIINIGSIGALSVVPTA---------------AVYCATKFA-VRA 162

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            S+    L+++  +I    V+PG + + L   I+
Sbjct: 163 ISD---GLRQESTNIRVTCVNPGVVESELAGTIT 193

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  102 bits (258), Expect = 3e-26
 Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 34/214 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   I+T A+ GIG   A   A  G  V+    N +  +E++K          +Q   L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D++    + +FA+E +     L++L N AG +   T     + + +     N    +L+ 
Sbjct: 58  DVTKKKQIDQFANEVE----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M        K G I+N+SS                    G      Y  +K A 
Sbjct: 114 KAFLPKMLA-----QKSGNIINMSSVASSV--------------KGVVNRCVYSTTKAAV 154

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           +  T  +A    + G  I  N V PG + T   +
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQ 186

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  102 bits (258), Expect = 4e-26
 Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 27/214 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDL 89
            A+VTG+S G+G   A  LA  G ++V+   R+  A  E  + I K     KV  ++ ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANV 63

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNL 147
              A +++   +   +   L++ +NNA      P M L + + +     N          
Sbjct: 64  GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQE 123

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
             + M K     +  G IV++SS               +        ++  G SK A   
Sbjct: 124 AAKLMEK-----NGGGHIVSISS---------------LGSIRYLENYTTVGVSKAALEA 163

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  LA  L      I  N+V  GAI T+  ++ 
Sbjct: 164 LTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHF 195

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  103 bits (259), Expect = 5e-26
 Identities = 49/270 (18%), Positives = 91/270 (33%), Gaps = 30/270 (11%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
           M  ++         +       Q     G  A+VTGA  GIG E A  L  RG  V++  
Sbjct: 1   MPAVTQPRGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIV-- 58

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMEL--DLSSLASVRKFASEFKSSGLPLNILINNAGI 118
            N A   E  + +V  I      A  +  ++  +  + +   E       L+I+ +N+G+
Sbjct: 59  -NYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV 117

Query: 119 MA-TPFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS 176
           ++      ++ +  +  F  N  G F +     + +          GR++ + S      
Sbjct: 118 VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGS------ 164

Query: 177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 236
                            + + Y  SK A       +A  + +    IT N V PG I T+
Sbjct: 165 --------ITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTD 214

Query: 237 LFRNISFFSGLVGLLGKYVIKNVEQGAATT 266
           ++  +       G        +       +
Sbjct: 215 MYHAVCREYIPNGENLSNEEVDEYAAVQWS 244

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  103 bits (259), Expect = 6e-26
 Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 29/216 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    IVTG  SGIG  TA + A  G +VV+A  N  A   V      EI  +K   + +
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV----ANEIG-SKAFGVRV 80

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D+SS         +  +    +++L+NNAG         + ++  +   + N  G FL +
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             ++  M +     +  G I+N +S                   S     +AY  SK A 
Sbjct: 141 KYVIPVMRR-----NGGGSIINTTS---------------YTATSAIADRTAYVASKGAI 180

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T  +A    ++G  I  N+V PG I +  F  I
Sbjct: 181 SSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFTKI 214

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  103 bits (258), Expect = 8e-26
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 32/229 (13%)

Query: 16  STAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRG---VHVVMAVRNMAACREVKKA 72
           S   +  + +     T ++TGAS+GIG  TA          + +++A R +    E+KK 
Sbjct: 22  SQGRKAAERLAKK--TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 73  IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDN 129
           I +E PNAKV   +LD++    ++ F          ++IL+NNAG          ++ ++
Sbjct: 80  IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139

Query: 130 IELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
           I+  F TN      +T  +L        ++   G IVN+ S   + +YP G         
Sbjct: 140 IQDVFDTNVTALINITQAVLPIF-----QAKNSGDIVNLGSIAGRDAYPTG--------- 185

Query: 190 SGYNRFSAYGQSKLANVLHTSELARR-LKEDGVDITANSVHPGAITTNL 237
                 S Y  SK A V   ++  R+ L    + +    + PG + T  
Sbjct: 186 ------SIYCASKFA-VGAFTDSLRKELINTKIRVI--LIAPGLVETEF 225

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  103 bits (258), Expect = 8e-26
 Identities = 65/218 (29%), Positives = 86/218 (39%), Gaps = 25/218 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A++TGA SGIG  TA  LA  GV V    R      EV   IV      +  A+E 
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEA 84

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D+S    +R    +       L+I++ NAGI     P   L     +   A N  G FL 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
            +L +  + +        G IV VSS         G R             +AY  +K A
Sbjct: 145 LHLTVPYLKQ-----RGGGAIVVVSSI-------NGTRTFTTPGA------TAYTATKAA 186

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            V    +LA  L +    I  N+V PGAI TN+  N  
Sbjct: 187 QVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNTK 222

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  102 bits (257), Expect = 9e-26
 Identities = 48/218 (22%), Positives = 79/218 (36%), Gaps = 24/218 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG  +G+G   A+ L+  G  VV+  R           I        V+A+  
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVC 90

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D+     V    +  ++    L++L+NNAG      P   ++ +      A N  G FL 
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T      M     ++ + GRI+N  S               I+ Q+     + Y  +K A
Sbjct: 151 TQHAFRMM---KAQTPRGGRIINNGS---------------ISAQTPRPNSAPYTATKHA 192

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
               T   A   +     I    +  G   T++   +S
Sbjct: 193 ITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARMS 228

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  102 bits (257), Expect = 9e-26
 Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 30/238 (12%)

Query: 6   SKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA 65
           S G    + +   + +   I  +G TA VTG S GIG   A+ LAL G  V +       
Sbjct: 8   SSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVAL---TYVN 64

Query: 66  CREVKKAIVKEIPNAKVQAMEL--DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TP 122
             E  +A+V EI  A  +A+ +  D     ++ +   E   +   L+IL+N+AGI    P
Sbjct: 65  AAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP 124

Query: 123 FM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI 181
               +  + +   A N    F+        +G         GRI+ + S           
Sbjct: 125 LEETTVADFDEVMAVNFRAPFVAIRSASRHLG-------DGGRIITIGS----------- 166

Query: 182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
               + +   +   S Y  SK A    T  LAR L   G  IT N VHPG+  T++  
Sbjct: 167 ---NLAELVPWPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNP 219

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  101 bits (255), Expect = 1e-25
 Identities = 61/218 (27%), Positives = 89/218 (40%), Gaps = 33/218 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
            G   +VTGA+ GIG   AR  A  G  VV+  R  A+  EV   I     P   + A+ 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 87  LDLSSLASVRKFA----SEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHI 139
           L+ ++    R+ A     EF      L+ L++NA I+   TP   L  ++       N  
Sbjct: 73  LENATAQQYRELAARVEHEFGR----LDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128

Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             F+LT  LL  + +     S++  I   SS                  + G   + AYG
Sbjct: 129 ATFMLTRALLPLLKR-----SEDASIAFTSS---------------SVGRKGRANWGAYG 168

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            SK A       LA  L+     + ANS++PGA  T +
Sbjct: 169 VSKFATEGLMQTLADELEGVT-AVRANSINPGATRTGM 205

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  101 bits (255), Expect = 1e-25
 Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 35/222 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVH-------VVMAVRNMAACREVKKAIVKEIPNAKVQ 83
             ++TGA  GIG   A   A    H       +V++ R  A   ++      E   A   
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTD 61

Query: 84  AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGH 141
            +  D+S +A VR+  +        ++ L+NNAG+        L++++ +    TN  G 
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGT 121

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           F LT  L   M +        G I  ++S               +     +   S Y  S
Sbjct: 122 FFLTQALFALMER-----QHSGHIFFITS---------------VAATKAFRHSSIYCMS 161

Query: 202 KLANVLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           K        E +    ++    +    V PGA+ T ++  + 
Sbjct: 162 KFG-QRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVD 200

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  101 bits (255), Expect = 1e-25
 Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 39/231 (16%)

Query: 14  SSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI 73
               +  +           +V G S  +G E  +    +  + +                
Sbjct: 7   HHHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP-------- 58

Query: 74  VKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSK---DNI 130
                     +  +  S    ++    +  S  + ++  +  AG  +     S     ++
Sbjct: 59  ------NADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSV 112

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           +     N    F   ++  + +       ++ G  V   +                   +
Sbjct: 113 KGMIDMNLYSAFASAHIGAKLL-------NQGGLFVLTGA---------------SAALN 150

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             +   AYG +K A      +LA          T+  + P  + T   R  
Sbjct: 151 RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY 201

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  101 bits (255), Expect = 1e-25
 Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 32/218 (14%)

Query: 30  LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
           +  +VTGA++G G    R    +G  V+   R     +E+K  +        +   +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDV 55

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFLLTN 146
            + A++ +  +   +    ++IL+NNAG+          S ++ E    TN+ G   +T 
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
            +L  M +        G I+N+ S    + Y  G               + YG +K   V
Sbjct: 116 AVLPGMVE-----RNHGHIINIGSTAGSWPYAGG---------------NVYGATKAF-V 154

Query: 207 LHTSELARR-LKEDGVDITANSVHPGAITTNLFRNISF 243
              S   R  L    V +T   + PG +    F N+ F
Sbjct: 155 RQFSLNLRTDLHGTAVRVT--DIEPGLVGGTEFSNVRF 190

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  102 bits (256), Expect = 1e-25
 Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 20/215 (9%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGAS GIG   AR L  +G+ VV   R +    E+            +     DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLLTNLL 148
           +   +    S  +S    ++I INNAG+     +LS      +  F  N +   + T   
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 153

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            ++M +   +    G I+N++S       P              +    Y  +K A V  
Sbjct: 154 YQSMKERNVDD---GHIININSMSGHRVLP-------------LSVTHFYSATKYA-VTA 196

Query: 209 TSELARR-LKEDGVDITANSVHPGAITTNLFRNIS 242
            +E  R+ L+E    I A  + PG + T     + 
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLH 231

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  101 bits (255), Expect = 1e-25
 Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 26/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
            G   ++TG+S+G+G   A   A     VV+           V + I K     +  A++
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVK 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLL 144
            D++  + V             L+++INNAG+        +S  +      TN  G FL 
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           +   ++   +        G ++N+SS               ++++  +  F  Y  SK  
Sbjct: 124 SREAIKYFVE-NDIK---GTVINMSS---------------VHEKIPWPLFVHYAASKGG 164

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
             L T  LA      G  I  N++ PGAI T
Sbjct: 165 MKLMTETLALEYAPKG--IRVNNIGPGAINT 193

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  101 bits (255), Expect = 2e-25
 Identities = 48/215 (22%), Positives = 79/215 (36%), Gaps = 24/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              TA++TG++SGIG   AR LA  G ++V+               V  + +  V     
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++  + +    +         +IL+NNAG+           +  +   A N    F   
Sbjct: 84  DMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTI 143

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M K        GRI+N++S                +        SAY  +K   
Sbjct: 144 RGAIPPMKK-----KGWGRIINIAS---------------AHGLVASPFKSAYVAAKHGI 183

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           +  T  +A  + E G  +T NS+ PG + T L   
Sbjct: 184 MGLTKTVALEVAESG--VTVNSICPGYVLTPLVEK 216

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  101 bits (254), Expect = 2e-25
 Identities = 59/232 (25%), Positives = 90/232 (38%), Gaps = 31/232 (13%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
               T     Q +  +   AIVTGAS GIG   A  LA  G  VV+   N A      + 
Sbjct: 11  VDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVI---NYAGKAAAAEE 67

Query: 73  IVKEIPNA--KVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKD 128
           +  +I  A  K    + D+S  A+VR+  +  + +   +++L+NNAGIM  T        
Sbjct: 68  VAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDA 127

Query: 129 NIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND 188
             +   A N  G F       + +          GRI+N+S+                  
Sbjct: 128 VFDRVIAVNLKGTFNTLREAAQRLRVG-------GRIINMST---------------SQV 165

Query: 189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
              +  +  Y  +K      T  L++ L+     IT N+V PG   T+LF  
Sbjct: 166 GLLHPSYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLE 215

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  101 bits (253), Expect = 3e-25
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 24/213 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
            G   ++TG+S GIG  TAR+ A  G  V +   +  A   E   ++  +          
Sbjct: 6   KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFA 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMA--TPFM-LSKDNIELQFATNHIGHFL 143
            DL++  + ++   EF +    +++LINNAG +    P   +     +     N     +
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNR-FSAYGQSK 202
            T   L  +   A+ S +   +++  S               I   +G       YG +K
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGS---------------IAGHTGGGPGAGLYGAAK 168

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                          +DG  +  N V PG + T
Sbjct: 169 AFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDT 199

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  101 bits (254), Expect = 3e-25
 Identities = 50/218 (22%), Positives = 76/218 (34%), Gaps = 29/218 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              T  +TGA+SG G   AR  A  G  +V+  R     + +   +  +    +V  + L
Sbjct: 20  MSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTL 76

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFLL 144
           D+   A++             L  LINNAG+            D+ +    TN  G    
Sbjct: 77  DVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYS 136

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T LLL  +            IVN+ S   ++ YP                   YG +K  
Sbjct: 137 TRLLLPRL----IAHGAGASIVNLGSVAGKWPYPGS---------------HVYGGTKAF 177

Query: 205 NVLHTSELARR-LKEDGVDITANSVHPGAITTNLFRNI 241
            V   S   R  L+  GV +T  ++ PG   +      
Sbjct: 178 -VEQFSLNLRCDLQGTGVRVT--NLEPGLCESEFSLVR 212

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  101 bits (253), Expect = 4e-25
 Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 29/222 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI---VKEIPNA--KV 82
            G T  ++G S GIG   A+ +A  G +V +  ++     ++   I    KEI  A  + 
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67

Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIG 140
             +  D+    +V    ++       ++I +NNA  +       +     +L       G
Sbjct: 68  LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRG 127

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            + ++   +  M            I+ +S                I  +  + R + Y  
Sbjct: 128 TYAVSQSCIPHMKG-----RDNPHILTLSP--------------PIRLEPKWLRPTPYMM 168

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNLFRNI 241
           +K    L    +A  L++ G  I +N++ P   + T   +N+
Sbjct: 169 AKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQNL 208

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  100 bits (252), Expect = 4e-25
 Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 36/234 (15%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
           +S +  +++ +G        ++TGASSGIG   AR  +  G  +++  R +   + +   
Sbjct: 2   ASMTGGQQMGRGSMKK--LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL- 58

Query: 73  IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNI 130
                        ++D++   +     +  +    P + ++NNAG+M    +     +  
Sbjct: 59  -------PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEW 111

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
           +  F  N +G       +L  M     ++   G I+N+SS   + ++P+           
Sbjct: 112 QRMFDVNVLGLLNGMQAVLAPM-----KARNCGTIINISSIAGKKTFPDH---------- 156

Query: 191 GYNRFSAYGQSKLANVLHTSELARR-LKEDGVDITANSVHPGAITTNLFRNISF 243
                +AY  +K A V   SE  R  +    V +   ++ P A+ T L  + + 
Sbjct: 157 -----AAYCGTKFA-VHAISENVREEVAASNVRVM--TIAPSAVKTELLSHTTS 202

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  100 bits (252), Expect = 4e-25
 Identities = 56/217 (25%), Positives = 85/217 (39%), Gaps = 28/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  AIVTG S GIG   AR L   G  V +A  ++ A + V   +          A+E+
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEV 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++  ASV     +   +    ++L  NAG+    P + ++ +  +  F  N  G FL  
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLAN 125

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            +           S+ +G IVN +S               +  + G    + Y  SK A 
Sbjct: 126 QIACRHF----LASNTKGVIVNTAS---------------LAAKVGAPLLAHYSASKFAV 166

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
              T  LAR +      I  N V PG + T +     
Sbjct: 167 FGWTQALAREMAPKN--IRVNCVCPGFVKTAMQEREI 201

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  100 bits (252), Expect = 4e-25
 Identities = 48/217 (22%), Positives = 85/217 (39%), Gaps = 30/217 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG+  GIG   A  L   G  VV+   N A   +  + +V EI      A+ +
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVV---NYANSTKDAEKVVSEIKALGSDAIAI 73

Query: 88  --DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFL 143
             D+  +  + K   +  +    L+I ++N+G+++      ++++  +  F+ N  G F 
Sbjct: 74  KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFF 133

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +       +        + GRIV  SS                +      + S Y  SK 
Sbjct: 134 VAREAYRHLT-------EGGRIVLTSS--------------NTSKDFSVPKHSLYSGSKG 172

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           A        ++   +    IT N+V PG   T++F  
Sbjct: 173 AVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFHE 207

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  102 bits (255), Expect = 5e-25
 Identities = 48/245 (19%), Positives = 91/245 (37%), Gaps = 29/245 (11%)

Query: 6   SKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA 65
           +    G      +  +      +G T  +TGAS GIG   A   A  G ++V+A +    
Sbjct: 22  ASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81

Query: 66  CREVKKAI---VKEIPNAKVQAM--ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
             ++   I    +EI     +A+   +D+     +     +       ++IL+NNA  ++
Sbjct: 82  HPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS 141

Query: 121 -TPFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP 178
            T  +      ++L    N  G +L +   +  + K     SK   I+N+S        P
Sbjct: 142 LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKK-----SKVAHILNISP-------P 189

Query: 179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNL 237
             +          + +  AY  +K    ++   +A   K    +I  N++ P  AI T  
Sbjct: 190 LNLN------PVWFKQHCAYTIAKYGMSMYVLGMAEEFKG---EIAVNALWPKTAIHTAA 240

Query: 238 FRNIS 242
              + 
Sbjct: 241 MDMLG 245

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  100 bits (251), Expect = 5e-25
 Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 33/221 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVV---MAVRNMAACREVKKAIVKEIPNAKVQA 84
                ++ G    +G  TA+  AL  V++V      ++     ++K  +  +   AKV  
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVAL 67

Query: 85  MELDLSSLASVRK-FASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGH 141
            + DLS+   V K F    K  G  ++I IN  G +   P +  S+   +     N+   
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFG-KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           +       + M          G I+ +++                   +    +S Y  +
Sbjct: 127 YFFIKQAAKHMN-------PNGHIITIAT---------------SLLAAYTGFYSTYAGN 164

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           K     +T   ++ L +    I+ N++ PG + T+ F    
Sbjct: 165 KAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQE 203

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 99.9 bits (250), Expect = 5e-25
 Identities = 51/214 (23%), Positives = 82/214 (38%), Gaps = 27/214 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAME 86
           +    +VTGAS GIG E A   A  G  V++  RN    R+V   I +E     +   ++
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPF-MLSKDNIELQFATNHIGHFL 143
           L   +  + ++ A     +   L+ +++NAG++    P    +    +     N    F+
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           LT  LL  + K     S  G +V  SS                  + G   + AY  SK 
Sbjct: 131 LTQALLPLLLK-----SDAGSLVFTSS---------------SVGRQGRANWGAYAASKF 170

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           A       LA    E    +  N ++PG   T +
Sbjct: 171 ATEGMMQVLAD---EYQQRLRVNCINPGGTRTAM 201

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  100 bits (251), Expect = 5e-25
 Identities = 48/218 (22%), Positives = 76/218 (34%), Gaps = 27/218 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA   IG  TA  LA  G  + +   N  A  + + ++ ++    + ++   
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D++S  +V             ++ L NNAG      P      D+       N  G F +
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              +   M          GRIVN +S               +    G    +AYG SK A
Sbjct: 124 LKAVSRQMIT-----QNYGRIVNTAS---------------MAGVKGPPNMAAYGTSKGA 163

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            +  T   A  L      I  N++ PG +         
Sbjct: 164 IIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQ 199

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =   99 bits (250), Expect = 6e-25
 Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 27/216 (12%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMA--VRNMAACREVKKAIVKEIPNAKVQAMELD 88
            A+VTG + GIG   +  LA  G  + +A   +      E  K I     + K   + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLD 61

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLTN 146
           ++  A+      E        ++L+NNAGI    P + +++++++  ++ N    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
                  +       +G+I+N +S               I    G+   SAY  +K A  
Sbjct: 122 AASRKFDELGV----KGKIINAAS---------------IAAIQGFPILSAYSTTKFAVR 162

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             T   A+ L   G   T N+  PG + T ++  I 
Sbjct: 163 GLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQID 196

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 99.5 bits (249), Expect = 7e-25
 Identities = 54/217 (24%), Positives = 82/217 (37%), Gaps = 32/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                IVTG+  GIG   A  LA  G  VV+A  N  A   V K IV +       ++ +
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAV 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA----TPFM-LSKDNIELQFATNHIGHF 142
           D+S   S +  A    +    ++ L+NNA I         + +  +  +   + N  G  
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
             T  + + M K        G IVN SS                   + +   + YG +K
Sbjct: 126 WCTRAVYKKMTK-----RGGGAIVNQSST------------------AAWLYSNYYGLAK 162

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           +     T +L+R L      I  N++ PG I T   R
Sbjct: 163 VGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANR 197

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  100 bits (250), Expect = 8e-25
 Identities = 41/226 (18%), Positives = 66/226 (29%), Gaps = 36/226 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
               A++TG +  IG   A  L  +G  VV+    +  A + +   +            +
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCK 68

Query: 87  LDLSSLASVRKFASEFKSSGL----PLNILINNAGIMA-TPFMLSKDNIEL--------- 132
            DLS  +S+     +            ++L+NNA     TP +   D             
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 133 ---QFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
               F +N +    L        G+     S+   +VN+                     
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD---------------AMTD 173

Query: 190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                F  Y  +K A    T   A  L      I  N+V PG    
Sbjct: 174 LPLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLL 217

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =   99 bits (250), Expect = 9e-25
 Identities = 45/223 (20%), Positives = 82/223 (36%), Gaps = 28/223 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI---VKEIPNAKVQA 84
           SG T  +TGAS GIG   A   A  G +V +A ++  A  ++   I      +  A  Q 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG 64

Query: 85  M--ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIG 140
           +  + D+     VR   +    +   ++IL+NNA  +     +       +L    N  G
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARG 124

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            F+     L  + +     +    I+ ++        P  +        + +   + Y  
Sbjct: 125 SFVCAQACLPHLLQ-----APNPHILTLAP-------PPSLN------PAWWGAHTGYTL 166

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNLFRNIS 242
           +K+   L T  LA      G  +  N++ P   I T+    + 
Sbjct: 167 AKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINMLP 207

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =   99 bits (250), Expect = 9e-25
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 29/216 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  AIVTGA +GIG   AR LA  G HV+ A  +  A          +I      A  +
Sbjct: 28  AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA----ATKIG-CGAAACRV 82

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S    +        ++   ++ L+ NAG++     +  + ++ +   A N  G +L T
Sbjct: 83  DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 M +        G IVN+SS               +  Q       AYG SK   
Sbjct: 143 KHAAPRMIE-----RGGGAIVNLSS---------------LAGQVAVGGTGAYGMSKAGI 182

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +  +   A  L+  G  I +N++ P  + T + +  
Sbjct: 183 IQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTA 216

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 99.1 bits (248), Expect = 1e-24
 Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 43/221 (19%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA+VTG++ G+G   A  LA  G  V++         E    + ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++   ++    S+  + G+ ++ILINNAGI    P + L  +N +    TN    FL++
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK--- 202
               + M       +  G+I+N+ S               +  Q+     + Y  +K   
Sbjct: 126 RSAAKRM----IARNSGGKIINIGS---------------LTSQAARPTVAPYTAAKGGI 166

Query: 203 ------LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                 +A      E A+       +I  N++ PG I T++
Sbjct: 167 KMLTCSMAA-----EWAQF------NIQTNAIGPGYILTDM 196

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 46/222 (20%), Positives = 77/222 (34%), Gaps = 36/222 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A++TG +SG+G          G  V +  ++    RE++ A            +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVG 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPF-MLSKDNIELQF----ATNHIG 140
           D+ SL   ++ A    ++   ++ LI NAGI   +T    L +D I+  F      N  G
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           +       L  +  +       G +V   S                           Y  
Sbjct: 119 YIHAVKACLPALVSS------RGSVVFTIS---------------NAGFYPNGGGPLYTA 157

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +K A V    ++A  L      +  N V PG + T+L    S
Sbjct: 158 TKHAVVGLVRQMAFELAP---HVRVNGVAPGGMNTDLRGPSS 196

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 98.7 bits (247), Expect = 2e-24
 Identities = 51/216 (23%), Positives = 73/216 (33%), Gaps = 32/216 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTG + GIG   A+  A  G  V +            K + + I        ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-----KEVAEAI---GGAFFQV 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           DL       +F  E   +   +++L+NNA I A    + +           N      L+
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            L    M K        G IVNV+S               +         +AY  SK   
Sbjct: 117 ALAAREMRK-----VGGGAIVNVAS---------------VQGLFAEQENAAYNASKGGL 156

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           V  T  LA  L      I  N+V PGAI T      
Sbjct: 157 VNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEA 190

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 50/219 (22%), Positives = 73/219 (33%), Gaps = 30/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAME 86
           +  T +V GA   IG   A   A  G +VV+               I K        A++
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIK 64

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMA--TPFM-LSKDNIELQFATNHIGHFL 143
            DL++ A V    S        ++ L++ AG +        + +         N    FL
Sbjct: 65  ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                L  M K        G IV  SS+  +     G                AY  SK 
Sbjct: 125 TAKTALPKMAKG-------GAIVTFSSQAGRDGGGPG--------------ALAYATSKG 163

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           A +  T  LA+ +   G  I  N+V PG I+T      +
Sbjct: 164 AVMTFTRGLAKEV---GPKIRVNAVCPGMISTTFHDTFT 199

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 26/213 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
           +   AIVTG   GIG   AR LA  G  + +  + +      V   +      A+V  + 
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLR 85

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT---PFM-LSKDNIELQFATNHIGHF 142
            DL+ L+S +       +    ++ L+NNAGI +     F+ L  +N +     N  G  
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTV 145

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
             T  +L+ M  +   +S    I+N++S               ++          Y  SK
Sbjct: 146 FFTQAVLKAMLASDARAS--RSIINITS---------------VSAVMTSPERLDYCMSK 188

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                 +  LA RL E G  I    V PG I +
Sbjct: 189 AGLAAFSQGLALRLAETG--IAVFEVRPGIIRS 219

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 97.7 bits (244), Expect = 5e-24
 Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 37/223 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGAS GIG   A  L   G  V +  R++   R V +         +   +  
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVC 61

Query: 88  DLSSLASVRKFASEFKSSGL-PLNILINNAGIMA--------TPFM-LSKDNIELQFATN 137
           D S  + VR    +        L++L+NNA              F        +      
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
             GH+  +      M       + +G IV +SS       P  ++            F+ 
Sbjct: 122 LRGHYFCSVYGARLMVP-----AGQGLIVVISS-------PGSLQ----------YMFNV 159

Query: 198 -YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            YG  K A     ++ A  L+  G  ++  S+ PG + T L +
Sbjct: 160 PYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLK 200

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 98.0 bits (245), Expect = 5e-24
 Identities = 53/217 (24%), Positives = 80/217 (36%), Gaps = 31/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               AI+TGA  GIG ET+RVLA  G  VV+A            ++             +
Sbjct: 10  ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVV 64

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML----SKDNIELQFATNHIGHFL 143
           DL++  SVR        +   L+I+ NNA       ML    + D  +  F  N  G  L
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +    +  +          G IVN+SS                   + Y+  +AY  +K 
Sbjct: 125 MCKYAIPRLISAGG-----GAIVNISS---------------ATAHAAYDMSTAYACTKA 164

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           A    T  +A +    G  +  N++ PG + T     
Sbjct: 165 AIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEV 199

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 98.1 bits (245), Expect = 5e-24
 Identities = 49/241 (20%), Positives = 88/241 (36%), Gaps = 37/241 (15%)

Query: 17  TAEEVTQG-------IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV 69
           T E  TQG           G +AIV+G + G+G  T R L   G+ VV+A       + +
Sbjct: 11  TLEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL 70

Query: 70  KKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDN 129
              +       + + +  +++S  SV          G     ++ + G      ++ +D 
Sbjct: 71  ADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDG 125

Query: 130 IEL---QF----ATNHIGHFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGI 181
                  F         G + +  L+  ++       + E G +V  +S     +  EG 
Sbjct: 126 SPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTAS----IAGYEG- 180

Query: 182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                  Q G    +AY  +K   +  T   AR L   G  I  N++ PG + T +  ++
Sbjct: 181 -------QIGQ---TAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESV 228

Query: 242 S 242
            
Sbjct: 229 G 229

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 97.6 bits (244), Expect = 6e-24
 Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 27/214 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               AIVTG +  IG      LA  G  V++A  + A   +  + +  E     V ++ +
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVM 69

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLL 144
           D+++  SV+            ++IL+  AGI         ++      Q   N  G F  
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              +   M +      K+G IV + S         G+  +R   Q+ YN   A   SK A
Sbjct: 130 CQAVGRIMLE-----QKQGVIVAIGSMS-------GLIVNRPQQQAAYN---A---SK-A 170

Query: 205 NVLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
            V      LA      G  I AN+V P  I T L
Sbjct: 171 GVHQYIRSLAAEWAPHG--IRANAVAPTYIETTL 202

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 98.0 bits (245), Expect = 6e-24
 Identities = 53/216 (24%), Positives = 71/216 (32%), Gaps = 34/216 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            AIVTGASSGIG   A + A  G  VV+  RN  A  E+   I       +  A+  D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 91  SLASVRKF----ASEFKSSGLPLNILINNAGIMA--TPFM-LSKDNIELQFATNHIGHFL 143
             A            F   G  L+   NNAG +        LS +       TN    FL
Sbjct: 68  DEALHEALVELAVRRF---G-GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
                +  +          G +   SS                   +G+   + Y  SK 
Sbjct: 124 AAKYQVPAIAA-----LGGGSLTFTSSFVGH--------------TAGFAGVAPYAASKA 164

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
             +     LA  L   G  I  N++ PG   T    
Sbjct: 165 GLIGLVQALAVELGARG--IRVNALLPGGTDTPANF 198

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 96.9 bits (242), Expect = 8e-24
 Identities = 60/212 (28%), Positives = 82/212 (38%), Gaps = 24/212 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG++SGIG   A  LA +G  +V+     AA  E  +A +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           DLS   +VR            ++IL+NNAGI           +  +   A N    F  T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M K        GRI+N++S                +        SAY  +K   
Sbjct: 123 AAALPHMKK-----QGFGRIINIAS---------------AHGLVASANKSAYVAAKHGV 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           V  T   A      G  ITAN++ PG + T L
Sbjct: 163 VGFTKVTALETAGQG--ITANAICPGWVRTPL 192

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 96.9 bits (242), Expect = 9e-24
 Identities = 57/223 (25%), Positives = 85/223 (38%), Gaps = 31/223 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                IVTGASSG+G    R+LA  G  V+       A  E    +      A V+    
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNA 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKD---NIELQFA----TNHIG 140
           D+++ A      +  K     ++ L+N AG      +L +     ++  FA     N IG
Sbjct: 61  DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD-SFARTVAVNLIG 119

Query: 141 HFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
            F +  L  E M +   ++  E G IVN +S     +  +G        Q G    +AY 
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTAS----IAAFDG--------QIGQ---AAYA 164

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            SK      T   AR L   G  I   ++ PG   T +   + 
Sbjct: 165 ASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGMP 205

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 46/214 (21%), Positives = 70/214 (32%), Gaps = 37/214 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGA+ GIG      L   G  V +A R +A               A    +  
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPG 73

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           DL   A          +    L+I++NNAG+++       +  +  L    N    F + 
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRIC 133

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M       +  G IVNV+S                         + Y  +K A 
Sbjct: 134 RAAIPLMAA-----AGGGAIVNVAS---------------CWGLRPGPGHALYCLTKAAL 173

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
              T  +       G  I  N+V P  + T + R
Sbjct: 174 ASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLR 205

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 35/218 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG  A++TGAS+GIG + A   A  G  V +A R+  A + V   I       K   +  
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRC 88

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++    VR    +       ++I + NAGI      + +  +  +    TN  G FL  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTA 148

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGY-----NRFSAYGQ 200
               +   +   +    G I+  +S                   SG+      + S Y  
Sbjct: 149 ----QAAARAMVDQGLGGTIITTAS------------------MSGHIINIPQQVSHYCT 186

Query: 201 SKLANVLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
           SK A V+H T  +A  L      I  NSV PG I T L
Sbjct: 187 SK-AAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTEL 221

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 95.6 bits (239), Expect = 2e-23
 Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 28/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A++TG ++GIG   A   A+ G  + +A    A   E + AI       +V  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKC 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S    V  F  +  S+    +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M +     +  GRI+N++S                        ++ Y  +K AN
Sbjct: 122 KAFVPGMKR-----NGWGRIINLTS---------------TTYWLKIEAYTHYISTKAAN 161

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +  T  LA  L +DG  IT N++ P  + T      +
Sbjct: 162 IGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASA 196

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 95.3 bits (238), Expect = 3e-23
 Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 32/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
            G TA+VTG++SGIG   A+VLA  G ++V+      A        + EI     K    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA------PALAEIARHGVKAVHH 56

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFL 143
             DLS +A +    +  +     ++IL+NNAGI    P      ++ +   A N    F 
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFH 116

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
            T L L  M          GRI+N++S               ++   G    +AY  +K 
Sbjct: 117 GTRLALPGMRA-----RNWGRIINIAS---------------VHGLVGSTGKAAYVAAKH 156

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
             V  T  +          +T N++ PG + T L + 
Sbjct: 157 GVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQK 191

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 95.4 bits (238), Expect = 5e-23
 Identities = 55/226 (24%), Positives = 75/226 (33%), Gaps = 56/226 (24%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              TA VTG SSGIG   AR LA RG+ V    R+          +        V     
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSC 80

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQF---------ATNH 138
           D++S   V    +       P+ IL+N+AG        +                  TN 
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGR-------NGGGETADLDDALWADVLDTNL 133

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
            G F +T  +L   G         GRIVN++S                  + G    + Y
Sbjct: 134 TGVFRVTREVLRAGGMREAGW---GRIVNIAS---------------TGGKQGVMYAAPY 175

Query: 199 GQSK---------LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
             SK         +       ELA+        IT N+V PG + T
Sbjct: 176 TASKHGVVGFTKSVGF-----ELAKT------GITVNAVCPGYVET 210

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 94.5 bits (236), Expect = 6e-23
 Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 31/214 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A VTGA SGIG E  R  A  G  +++  R  AA         +E+  A    +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAVAARIVA 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D++   ++   A+E ++   P++IL+N+AGI      +           A N  G F  +
Sbjct: 66  DVTDAEAMTAAAAEAEAVA-PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWAS 124

Query: 146 NLLLETMGKTARESSKEGRIVNVSS-RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                 M          G IVN+ S      + P+                S+Y  SK  
Sbjct: 125 RAFGRAMVA-----RGAGAIVNLGSMSGTIVNRPQFA--------------SSYMASK-G 164

Query: 205 NVLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
            V   T  LA      G  +  N++ PG + T +
Sbjct: 165 AVHQLTRALAAEWAGRG--VRVNALAPGYVATEM 196

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 94.2 bits (235), Expect = 1e-22
 Identities = 48/221 (21%), Positives = 75/221 (33%), Gaps = 46/221 (20%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                IVTGAS GIG   A      G  V+    +                 AK   +E 
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIEC 53

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D+++   V+            +++L+NNAGI +      +S          N  G++  +
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M +     S++  IVN+SS               +         SAY  SK A 
Sbjct: 114 KFAIPYMIR-----SRDPSIVNISS---------------VQASIITKNASAYVTSKHAV 153

Query: 206 VLHT----SELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           +  T     + A         +  N+V P  I T L R  +
Sbjct: 154 IGLTKSIALDYAPL-------LRCNAVCPATIDTPLVRKAA 187

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 94.2 bits (235), Expect = 1e-22
 Identities = 46/217 (21%), Positives = 76/217 (35%), Gaps = 45/217 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            AIVTG SSGIG      L   G  VV    +  +   V                ++D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF------------KIDVT 63

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           +   V++   +       ++IL+NNAGI   +   +   +        N  G +L+    
Sbjct: 64  NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           +  M          G I+N++S               +   +     +AY  SK A +  
Sbjct: 124 IPVMLA-----IGHGSIINIAS---------------VQSYAATKNAAAYVTSKHALLGL 163

Query: 209 T----SELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           T     + A +       I  N+V PG I T +    
Sbjct: 164 TRSVAIDYAPK-------IRCNAVCPGTIMTPMVIKA 193

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 93.3 bits (233), Expect = 2e-22
 Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 32/214 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                I+TG SSG+G   A   A  G  VV+  R      E K  I +     ++  +++
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQM 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+ +   ++K   +       ++ILINNA      P   LS +           G F  +
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCS 122

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             + +       E   +G I+N+ +                              +K   
Sbjct: 123 QAIGKYW----IEKGIKGNIINMVA---------------TYAWDAGPGVIHSAAAKAGV 163

Query: 206 VLHT----SELARRLKEDGVDITANSVHPGAITT 235
           +  T     E  R+       I  N++ PG I  
Sbjct: 164 LAMTKTLAVEWGRKY-----GIRVNAIAPGPIER 192

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 93.5 bits (233), Expect = 2e-22
 Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 31/224 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            GL A++TG +SG+G  TA  L  +G   V+     +      K +              
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPA 65

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDNIEL---QF----ATNHI 139
           D++S   V+   +  K     +++ +N AGI +A+     K         F      N +
Sbjct: 66  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125

Query: 140 GHFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
           G F +  L+   MG+   +   + G I+N +S     +  EG        Q G    +AY
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS----VAAFEG--------QVGQ---AAY 170

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             SK   V  T  +AR L   G  I   ++ PG   T L  ++ 
Sbjct: 171 SASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLP 212

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 93.9 bits (234), Expect = 2e-22
 Identities = 46/213 (21%), Positives = 76/213 (35%), Gaps = 28/213 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA---KVQA 84
            G  AIVTG ++GIG    + L   G +VV+A R +   +     +   +P     +V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHF 142
           ++ ++ +   V         +   +N L+NN G    +P   +S         TN  G F
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 136

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            +   +  +  K        G IVN+                    ++G+      G ++
Sbjct: 137 YMCKAVYSSWMK-----EHGGSIVNIIV----------------PTKAGFPLAVHSGAAR 175

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
                 T  LA      G  I  N V PG I +
Sbjct: 176 AGVYNLTKSLALEWACSG--IRINCVAPGVIYS 206

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 93.5 bits (233), Expect = 2e-22
 Identities = 59/246 (23%), Positives = 83/246 (33%), Gaps = 36/246 (14%)

Query: 8   GASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAAC 66
           G+S      ++  V +G       A+VTGA+  IG   A  L   G  VV+    +  A 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61

Query: 67  REVKKAIVKEIPNAKVQAMELDLSS----LASVRKFASEFKSSGLPLNILINNAGIM-AT 121
             +   + KE  N      + DL++     AS  +  +    +    ++L+NNA     T
Sbjct: 62  VSLADELNKERSN-TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT 120

Query: 122 PF--MLSKDNIELQ---------FATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVS 169
           P      +DN   +           TN I  FLLT    +    T    +S    IVN+ 
Sbjct: 121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180

Query: 170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVH 229
                                    FS Y   K A V  T   A  L   G  I  N V 
Sbjct: 181 D---------------AMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVA 223

Query: 230 PGAITT 235
           PG    
Sbjct: 224 PGVSLL 229

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 93.5 bits (233), Expect = 2e-22
 Identities = 58/241 (24%), Positives = 86/241 (35%), Gaps = 56/241 (23%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
            SS      +         A+VTGA+SGIG E AR L   G+ V +  R     R   K 
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65

Query: 73  IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-- 130
           + +     +      D+ S+  +    +       P+++L+NNAG               
Sbjct: 66  LREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR-------PGGGATA 116

Query: 131 ---ELQF----ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF 183
              +  +     TN  G F +T  +L+  G   R +   GRIVN++S             
Sbjct: 117 ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT---GRIVNIAS------------- 160

Query: 184 DRINDQSGYNRFSAYGQSK---------LANVLHTSELARRLKEDGVDITANSVHPGAIT 234
                + G    + Y  SK         L       ELAR        IT N+V PG + 
Sbjct: 161 --TGGKQGVVHAAPYSASKHGVVGFTKALGL-----ELART------GITVNAVCPGFVE 207

Query: 235 T 235
           T
Sbjct: 208 T 208

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 93.4 bits (233), Expect = 3e-22
 Identities = 52/230 (22%), Positives = 80/230 (34%), Gaps = 31/230 (13%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMA--VRNMAACREVKKAIVKEIPNAKVQAME 86
              A+VTG  SGIG   A   A  G  V +          ++VK  I +     K   + 
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLP 106

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFM-LSKDNIELQFATNHIGHFL 143
            DLS  +  R    + + +   L+IL   AG          L+ +  +  FA N    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +T   +  + K          I+  SS               I           Y  +K 
Sbjct: 167 ITQEAIPLLPKG-------ASIITTSS---------------IQAYQPSPHLLDYAATKA 204

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK 253
           A + ++  LA+++ E G  I  N V PG I T L  +       +   G+
Sbjct: 205 AILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQ 252

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 93.0 bits (232), Expect = 3e-22
 Identities = 46/211 (21%), Positives = 81/211 (38%), Gaps = 25/211 (11%)

Query: 28  SGLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
            G   +VT A+ +GIG+ TAR   L G  VV++  +     E +  +  ++   +V+A+ 
Sbjct: 21  KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL-ADLGLGRVEAVV 79

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLL 144
            D++S  +V    ++       L++L+NNAG+   TP + ++ +  +             
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRA 139

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T   L       R     G IVN +S               +      +  S Y  +K  
Sbjct: 140 TRAALRYF----RGVDHGGVIVNNAS---------------VLGWRAQHSQSHYAAAKAG 180

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
            +  T   A    E G  +  N+V P     
Sbjct: 181 VMALTRCSAIEAVEFG--VRINAVSPSIARH 209

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 92.0 bits (229), Expect = 3e-22
 Identities = 26/215 (12%), Positives = 51/215 (23%), Gaps = 35/215 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           S    IV G    +G+         G  V+    +     +    +              
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV----------DGNK 51

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLL 144
           + +         +     G  ++ +   AG  A           N +L    +     + 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
             L    +          G +    +                           YG +K A
Sbjct: 112 AKLATTHLKPG-------GLLQLTGA---------------AAAMGPTPSMIGYGMAKAA 149

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
               TS LA +      +    ++ P  + T + R
Sbjct: 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR 184

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 91.8 bits (229), Expect = 5e-22
 Identities = 36/217 (16%), Positives = 62/217 (28%), Gaps = 35/217 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VT A    G      L   G  VV    + A   E       E  N    A+     
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAE---RQRFESENPGTIAL----- 54

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFML-----SKDNIELQFATNHIGHFLLT 145
           +     +        G  ++ +++N  I      L     S+ +I   F    I   LL 
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  +       +    ++ ++S                  +        YG ++ A 
Sbjct: 115 QSAIAPLRA-----AGGASVIFITS---------------SVGKKPLAYNPLYGPARAAT 154

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           V      A+ L  DG  I   ++ P       +   S
Sbjct: 155 VALVESAAKTLSRDG--ILLYAIGPNFFNNPTYFPTS 189

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 94.7 bits (236), Expect = 6e-22
 Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 46/219 (21%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGA+ GIG   A V A  G  VV             + + +        A+ L
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRVADKVGGTALTL 266

Query: 88  DLSSLASVRKFASEF-KSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATN 137
           D+++  +V K  +   +  G  ++IL+NNAGI  T     +D +     E ++    A N
Sbjct: 267 DVTADDAVDKITAHVTEHHGGKVDILVNNAGI--T-----RDKLLANMDEKRWDAVIAVN 319

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
            +    LT  L+           + GR++ +SS               +   +G NR   
Sbjct: 320 LLAPQRLTEGLVGNGTI-----GEGGRVIGLSS---------------MAGIAG-NRGQT 358

Query: 198 -YGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            Y  +K   +     LA  L + G  IT N+V PG I T
Sbjct: 359 NYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIET 395

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 92.3 bits (230), Expect = 7e-22
 Identities = 44/210 (20%), Positives = 73/210 (34%), Gaps = 25/210 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A +TG  SGIG   A +    G H V+A R++       + +       +   + +
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSM 84

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+ +  +V     +       ++ILIN A      P   LS +  +     +  G F ++
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVS 144

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            +L E   +        G IVN+++                    G       G +K A 
Sbjct: 145 RVLYEKFFR-----DHGGVIVNITA---------------TLGNRGQALQVHAGSAKAAV 184

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
              T  LA         I  NS+ PG I+ 
Sbjct: 185 DAMTRHLAVEWGPQN--IRVNSLAPGPISG 212

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 92.9 bits (231), Expect = 7e-22
 Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 28/213 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP---NAKVQAMEL 87
             ++TGASSG G  TA  LA  G  V  ++R++          +       +  ++ +EL
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D+ S  SV +   +       +++LI+NAG M        + +     +  N +    + 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M    R   K G ++ +SS       P  +              + Y  +K A 
Sbjct: 127 RAALPHM----RR-QKHGLLIWISSSSSAGGTPPYL--------------APYFAAKAA- 166

Query: 206 VLHTSE-LARRLKEDGVDITANSVHPGAITTNL 237
           +   +   AR L   G++ +   + PGA T+  
Sbjct: 167 MDAIAVQYARELSRWGIETSI--IVPGAFTSGT 197

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 91.9 bits (229), Expect = 7e-22
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 24/210 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G + +VTG + GIG   A V A  G +V +A R+ A        + +   + KV  ++ 
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQT 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S  A     A         ++++  NAG+    P   ++ + +   FA N  G F   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L+ +       S  GR+V  SS                   +GY  +S YG +K A 
Sbjct: 128 QACLDALIA-----SGSGRVVLTSS--------------ITGPITGYPGWSHYGATKAAQ 168

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
           +      A  L      IT N++ PG I T
Sbjct: 169 LGFMRTAAIELAPHK--ITVNAIMPGNIMT 196

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 91.9 bits (229), Expect = 7e-22
 Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 33/210 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                ++TGAS GIG    R    R   VV   R++    +             +  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAG 75

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S   +  +   E       ++ L+NNAG+ +A PF+ +++++ +     N  G F +T
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHIT 135

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 M K        G IV++++                              +K   
Sbjct: 136 QRAAAEMLKQ-----GSGHIVSITTSLVDQPMV---------GMPSA----LASLTKGGL 177

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITT 235
              T  LA      G  +  N+V PG I T
Sbjct: 178 NAVTRSLAMEFSRSG--VRVNAVSPGVIKT 205

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 91.8 bits (229), Expect = 8e-22
 Identities = 58/212 (27%), Positives = 83/212 (39%), Gaps = 28/212 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA+VTGA SGIG   A   A  G HV+   R     +EV   I         +A+  
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVA 86

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL+ L      A E  ++   +++L+NNAGI    P   +S          N    ++L+
Sbjct: 87  DLADLEGAANVAEELAATR-RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLS 145

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                 M          GRIV ++S     S+             G    +AY  SK A 
Sbjct: 146 RSFGTAMLA-----HGSGRIVTIAS---MLSF------------QGGRNVAAYAASKHAV 185

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNL 237
           V  T  LA      G  +  N++ PG + T  
Sbjct: 186 VGLTRALASEWAGRG--VGVNALAPGYVVTAN 215

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 91.4 bits (228), Expect = 9e-22
 Identities = 51/221 (23%), Positives = 76/221 (34%), Gaps = 42/221 (19%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG S G+G   A+ LA  G  VV+A RN+    E  + + ++    +  A   
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRC 78

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S+   V+K     K     L+ ++N AGI    P      D        N  G + + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK--- 202
                 + +     S    I+N+ S                  +      SAY  SK   
Sbjct: 139 REAFSLLRE-----SDNPSIINIGS---LTVE-----------EVTMPNISAYAASKGGV 179

Query: 203 ------LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                 LA      E  R        I  N + PG   T +
Sbjct: 180 ASLTKALAK-----EWGRY------GIRVNVIAPGWYRTKM 209

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 90.8 bits (226), Expect = 1e-21
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 45/223 (20%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             +++G ++GIG  T +VL   G  +V      A                 V A   DLS
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------VIA---DLS 43

Query: 91  SLASVRKFASEFKSSGL-PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLL 149
           +    ++  ++  +     ++ L+  AG+           +    + N+ G   L +  L
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMDAFL 98

Query: 150 ETMGKTARESSKEGRIVNVSS-------RRHQFSYPEGIRFDRINDQS------GYNRFS 196
             + K  +        V +SS                    +    ++            
Sbjct: 99  PALKKGHQ-----PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153

Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
           AY  SK A  +   + A    E G  +  N++ PGA  T L +
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQ 194

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 26/158 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI-----VKEIPNAKV 82
               A+VTGA SGIG   +  LA  G  V     + AA +E  + +      +  P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 83  QAMELDLSSLASVRKFASEFKSS-GLPLNILINNAGIMATPFMLSKDNI-----ELQF-- 134
            A + D+S   + R    + ++    P +++++ AGI       ++D       E  +  
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-------TQDEFLLHMSEDDWDK 118

Query: 135 --ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
             A N  G FL+T    + +          G I+N+SS
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGC----RGSIINISS 152

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 90.7 bits (226), Expect = 2e-21
 Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 31/219 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              T IVTG + GIG    R +A  G +V +  R+ A   EV + + KE    K +A + 
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQC 71

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S+   V K   +  +   P++ LI NAG+ +  P   L+ ++    +  N  G F   
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131

Query: 146 NLLLETMGKTARESSKEGRIVNVSS------RRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
             + +   +  +    +G IV  SS       +   +            Q  YN      
Sbjct: 132 RAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSSLNGSLT--------QVFYN------ 173

Query: 200 QSKLANVLH-TSELARRLKEDGVDITANSVHPGAITTNL 237
            SK A   +    LA      G  I  N++ PG + T+ 
Sbjct: 174 SSK-AACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQ 209

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 90.3 bits (225), Expect = 2e-21
 Identities = 51/216 (23%), Positives = 70/216 (32%), Gaps = 48/216 (22%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG    VTGA  GIG  TA      G  V    +                         +
Sbjct: 6   SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------------EQYPFATEVM 53

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D++  A V +      +    L+ L+N AGI+       LSK++ +  FA N  G F L 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113

Query: 146 NLLLETMGKTARESSKEGRIVNVSS------RRHQFSYPEGIRFDRINDQSGYNRFSAYG 199
              +    +      + G IV V+S      R                        SAYG
Sbjct: 114 QQTMNQFRR-----QRGGAIVTVASDAAHTPRIGM---------------------SAYG 147

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            SK A       +   L   G  +  N V PG+  T
Sbjct: 148 ASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDT 181

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 91.1 bits (227), Expect = 2e-21
 Identities = 59/244 (24%), Positives = 89/244 (36%), Gaps = 40/244 (16%)

Query: 3   RLSSKGASGFSSSSTAEEVTQGI--DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60
              ++G        +AE   + +  D S  + +VTG + GIG   A V A  G +V +A 
Sbjct: 13  EAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAA 72

Query: 61  RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA 120
           R+      V   +  E+    V  + LD+S   S    A     +   L+++  NAGI  
Sbjct: 73  RSPRELSSVTAEL-GELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI-- 129

Query: 121 TPFML----SKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS 176
            P       + + +      N  G        L  +       S  GR++  SS      
Sbjct: 130 FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA-----SGRGRVILTSS------ 178

Query: 177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS-----ELARRLKEDGVDITANSVHPG 231
                        +GY  +S YG SK A  L        ELA R       +T N++ PG
Sbjct: 179 --------ITGPVTGYPGWSHYGASK-AAQLGFMRTAAIELAPR------GVTVNAILPG 223

Query: 232 AITT 235
            I T
Sbjct: 224 NILT 227

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 51/212 (24%), Positives = 75/212 (35%), Gaps = 36/212 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG T +VTGA+SGIG     + A  G  +V   R      E   A+      A+  A+  
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S   +V    +E       L+ + + AG+  +     L  +  E     N  G FL+ 
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF--SAYGQSKL 203
               E +        + G +V   S                   +G   F  + Y   KL
Sbjct: 120 RKAGEVL-------EEGGSLVLTGSV------------------AGLGAFGLAHYAAGKL 154

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITT 235
             V     LA  L   G  +  N + PG I T
Sbjct: 155 GVVGLARTLALELARKG--VRVNVLLPGLIQT 184

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 90.4 bits (225), Expect = 4e-21
 Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 26/211 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A +TG  +G+G     +L+  G   V+A R M   +   + I  +    KV A++ 
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 83

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+     V+   SE        NI+INNA     +P   LS +  +        G   +T
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             + + +     ++ K    +++++               I  ++G         +K A 
Sbjct: 144 LEIGKQL----IKAQKGAAFLSITT---------------IYAETGSGFVVPSASAK-AG 183

Query: 206 VLH-TSELARRLKEDGVDITANSVHPGAITT 235
           V   +  LA    + G  +  N + PG I T
Sbjct: 184 VEAMSKSLAAEWGKYG--MRFNVIQPGPIKT 212

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 89.6 bits (223), Expect = 4e-21
 Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 35/224 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A+VTG +SG+G  T + L   G  VV+            + +V ++   + +    
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR-------GEDVVADL-GDRARFAAA 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI--ELQFA----TNHIGH 141
           D++  A+V       ++ G  L I++N AG      +LS+D +     F      N +G 
Sbjct: 60  DVTDEAAVASALDLAETMG-TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118

Query: 142 FLLTNLLLETMGKTARESSKE---GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
           F +  L  E + KT          G I+N +S     +  +G        Q G    +AY
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTAS----VAAFDG--------QIGQ---AAY 163

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             SK   V  T  +AR L      I   ++ PG   T L  ++ 
Sbjct: 164 SASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASLP 205

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 89.5 bits (223), Expect = 6e-21
 Identities = 51/238 (21%), Positives = 87/238 (36%), Gaps = 40/238 (16%)

Query: 13  SSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA 72
            S+ST +  T  +      AI+TG + GIG  TA++    G  VV+A       ++V   
Sbjct: 2   GSTSTPDSSTNRLQDK--VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV--- 56

Query: 73  IVKEI-PNAKVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFM--- 124
               I     +  +  D++    VR       ++       L+I+  N G+++T      
Sbjct: 57  -CNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK----LDIMFGNVGVLSTTPYSIL 111

Query: 125 -LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF 183
               ++ +     N  G FL+       M       +K+G IV  +S             
Sbjct: 112 EAGNEDFKRVMDINVYGAFLVAKHAARVMIP-----AKKGSIVFTASI-------SSFT- 158

Query: 184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                 +G      Y  +K A +  T+ L   L E G  I  N V P  + + L  ++
Sbjct: 159 ------AGEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV 208

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 88.8 bits (221), Expect = 7e-21
 Identities = 48/213 (22%), Positives = 71/213 (33%), Gaps = 47/213 (22%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                +V  AS GIG   A VL+  G  V +  RN    +      V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV-----------C 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHFLLT 145
           DL     +     + K     ++IL+ NAG   A  F  L+ ++ +    +  +    + 
Sbjct: 67  DLRKD--LDLLFEKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN--RFSAYGQSK- 202
              L  M +        GRIV ++S     S         I +    N  R +  G  K 
Sbjct: 121 RNYLPAMKE-----KGWGRIVAITSF----SVISP-----IENLYTSNSARMALTGFLKT 166

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           L+      E+A         IT N V PG   T
Sbjct: 167 LSF-----EVAPY------GITVNCVAPGWTET 188

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 90.1 bits (224), Expect = 8e-21
 Identities = 45/217 (20%), Positives = 75/217 (34%), Gaps = 32/217 (14%)

Query: 31  TAIVTGASSGIGTETARVLA---LRGVHVVMAVRNMAACRE-VKKAIVKEIPNAKVQAME 86
             ++TG SSGIG   A  LA    +   V   +R++       + A     P   ++ ++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPF-MLSKDNIELQFATNHIGHFLL 144
           LD+    SV             +++L+ NAG+ +  P   L +D +      N +G   +
Sbjct: 64  LDVRDSKSVAAARERVTEG--RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               L  M    +     GR++   S       P                   Y  SK A
Sbjct: 122 LQAFLPDM----KR-RGSGRVLVTGSVGGLMGLPFN---------------DVYCASKFA 161

Query: 205 NVLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRN 240
            +    E LA  L   GV ++   +  G + T     
Sbjct: 162 -LEGLCESLAVLLLPFGVHLSL--IECGPVHTAFMEK 195

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 88.1 bits (219), Expect = 9e-21
 Identities = 26/215 (12%), Positives = 52/215 (24%), Gaps = 35/215 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                +V G    +G+   +    R   V                +           M  
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIV----------KMTD 55

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLL 144
             +  A               ++ ++  AG  A           N +L +  +     + 
Sbjct: 56  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           ++L  + + +        G +    +                    G      YG +K A
Sbjct: 116 SHLATKHLKEG-------GLLTLAGA---------------KAALDGTPGMIGYGMAKGA 153

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
                  LA +         A +V P  + T + R
Sbjct: 154 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 188

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 53/219 (24%), Positives = 83/219 (37%), Gaps = 39/219 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           +A+VTG +SG+G   A  L  RG  VV+                       +  +E D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVT 49

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDN------IELQFATNHIGHFLL 144
               VR+  +  +    PL  +++ AG+     +L K+              N +G F +
Sbjct: 50  REEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 145 TNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
             L    M +   ++  + G IVN +S     +  EG        Q G    +AY  SK 
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTAS----VAAFEG--------QIGQ---AAYAASKG 153

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
             V  T   AR L   G  I   +V PG   T L + + 
Sbjct: 154 GVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLP 190

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 88.0 bits (219), Expect = 1e-20
 Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 33/208 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TAIVT      G  +A  L+  G  V     +     E++               +L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPM 54

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLLTNL 147
           S     +      S+   +++L++N        P    + ++         I  F L N 
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +   M K      K G I+ ++S                     +   S Y  ++     
Sbjct: 115 VASQMKK-----RKSGHIIFITS---------------ATPFGPWKELSTYTSARAGACT 154

Query: 208 HTSELARRLKEDGVDITANSVHPGAITT 235
             + L++ L E    I   ++ P  + +
Sbjct: 155 LANALSKELGEYN--IPVFAIGPNYLHS 180

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 87.9 bits (219), Expect = 1e-20
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 23/155 (14%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           +  +   A+VTGAS GIG E A  LA +G  VV    + A+  + + ++ ++    K + 
Sbjct: 1   MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARG 58

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ---------FA 135
           + L++S + S++ F +E K+  L ++IL+NNAGI       ++DN+ ++           
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI-------TRDNLMMRMSEDEWQSVIN 111

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
           TN    F ++   +  M K      + GRI+++ S
Sbjct: 112 TNLSSIFRMSKECVRGMMK-----KRWGRIISIGS 141

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 88.8 bits (221), Expect = 1e-20
 Identities = 43/238 (18%), Positives = 75/238 (31%), Gaps = 37/238 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMA--------VRNMAACREVKKAIVKEIPNA-- 80
             +VTG + G G   A  LA  G  +++              A     +    E+     
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71

Query: 81  KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFAT 136
           K    E+D+   A+V +      +EF   G  L++++ NAGI      L        F  
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEF---G-KLDVVVANAGICPLGAHLPVQAFADAFDV 127

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS---RRHQFSYPEGIRFDRINDQSGYN 193
           + +G     +  L  +            I+   S                          
Sbjct: 128 DFVGVINTVHAALPYLTSG-------ASIITTGSVAGLI-------AAAQPPGAGGPQGP 173

Query: 194 RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL 251
             + Y  +K     +T +LA +L      I AN +HP  + T++  +   +      L
Sbjct: 174 GGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQFRPDL 229

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 87.9 bits (219), Expect = 1e-20
 Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 30/211 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G TA+VTGA+ GIG   A  LA  G  V+++  N    +    +I       K +A+  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAA 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S   SV+   +E ++    ++IL+NNA I+    +  +  D+       N  G F++T
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA-YGQSKLA 204
               + M    +     GR+++++S                   +G     A Y  +K  
Sbjct: 120 RAGTDQMRAAGK----AGRVISIAS---------------NTFFAG-TPNMAAYVAAKGG 159

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
            +  T  LA  L +    ITAN+V PG I +
Sbjct: 160 VIGFTRALATELGKYN--ITANAVTPGLIES 188

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 86.6 bits (215), Expect = 2e-20
 Identities = 29/230 (12%), Positives = 77/230 (33%), Gaps = 61/230 (26%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           + +  ++ GAS  +G+     L  +   V+ A R+                      + +
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTV 41

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLT 145
           D++++ S++K   +       ++ +++  G    +P   L+ +   +  ++   G   L 
Sbjct: 42  DITNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK--- 202
            L ++++       + +G     +                I  +    + ++   +    
Sbjct: 98  LLGIDSL-------NDKGSFTLTTG---------------IMMEDPIVQGASAAMANGAV 135

Query: 203 --LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL 250
              A      E+ R        I  N+V P  +  +  +   FF G + +
Sbjct: 136 TAFAKSA-AIEMPRG-------IRINTVSPNVLEESWDKLEPFFEGFLPV 177

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               AIVTGAS GIG   A  LA RG  V+      A    +  A  +     + +   L
Sbjct: 27  DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVL 84

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           +++   +V             LN+L+NNAGI       ++D +     + ++     TN 
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGI-------TQDQLAMRMKDDEWDAVIDTNL 137

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
              F L+  +L  M K     ++ GRIVN++S
Sbjct: 138 KAVFRLSRAVLRPMMK-----ARGGRIVNITS 164

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 23/151 (15%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
              A+VTGA  GIG E A++LA    HV+   R   +C  V   I       +      D
Sbjct: 44  NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGD 101

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNHI 139
           +S    + +  ++  +    ++IL+NNAGI       ++DN+       ++     TN  
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI-------TRDNLFLRMKNDEWEDVLRTNLN 154

Query: 140 GHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
             F +T  + + M       ++ GRI+N+SS
Sbjct: 155 SLFYITQPISKRMIN-----NRYGRIINISS 180

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 87.2 bits (217), Expect = 3e-20
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 26/152 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGAS GIG   A +LA RG  V+    + +  + +   +         + M L
Sbjct: 8   EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMAL 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           ++++  S+             ++IL+NNAGI       ++DN+     E ++     TN 
Sbjct: 63  NVTNPESIEAVLKAITDEFGGVDILVNNAGI-------TRDNLLMRMKEEEWSDIMETNL 115

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
              F L+  +L  M K      ++GRI+NV S
Sbjct: 116 TSIFRLSKAVLRGMMK-----KRQGRIINVGS 142

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 87.2 bits (217), Expect = 4e-20
 Identities = 50/232 (21%), Positives = 81/232 (34%), Gaps = 69/232 (29%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
           +   A VTG   G+G   +R L   G+ V +                         +A  
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYA 81

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATN 137
           +D++   S  + A +  +    +++LINNAGI       ++D       +  +     T+
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGI-------TRDATFMKMTKGDWDAVMRTD 134

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
               F +T   +  M +      + GRIVN+ S               +N   G     A
Sbjct: 135 LDAMFNVTKQFIAGMVE-----RRFGRIVNIGS---------------VNGSRG-----A 169

Query: 198 YGQ-----SK---------LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           +GQ     +K         LA      E A+R       IT N+V PG + T
Sbjct: 170 FGQANYASAKAGIHGFTKTLAL-----ETAKR------GITVNTVSPGYLAT 210

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 86.8 bits (216), Expect = 4e-20
 Identities = 52/233 (22%), Positives = 85/233 (36%), Gaps = 71/233 (30%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
           S   A VTG   GIGT   + L   G  VV            +   +++         A 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVA---GCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----AT 136
           E ++    S ++   + K+    +++L+NNAGI       ++D +        +     T
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI-------TRDVVFRKMTREDWQAVIDT 121

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           N    F +T  +++ M +        GRI+N+SS               +N Q G     
Sbjct: 122 NLTSLFNVTKQVIDGMVE-----RGWGRIINISS---------------VNGQKG----- 156

Query: 197 AYGQ-----SK---------LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            +GQ     +K         LA      E+A +       +T N+V PG I T
Sbjct: 157 QFGQTNYSTAKAGIHGFTMSLA-----QEVATK------GVTVNTVSPGYIGT 198

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 86.7 bits (215), Expect = 1e-19
 Identities = 48/273 (17%), Positives = 84/273 (30%), Gaps = 56/273 (20%)

Query: 1   MWRLSSKGASGFSSSSTAEEVTQGIDGSGL---TAIVTGASSGIGTETARVLALRGVHVV 57
           + R S  G+S      ++  V +G   +      A+VTGA+  +G   A  L   G  V 
Sbjct: 15  VPRGSHMGSSHHHHHHSSGLVPRGSHMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVC 74

Query: 58  M-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL--------- 107
           +   R+ A    +   +    PN     ++ DLS++A+     ++  +            
Sbjct: 75  LHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELV 133

Query: 108 --------PLNILINNAGIMA-TPFMLSKD---------------NIELQFATNHIGHFL 143
                     ++L+NNA     TP + + +                    F +N I  + 
Sbjct: 134 AACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYF 193

Query: 144 LTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
           L       +  T  +       I+N+                          ++ Y  +K
Sbjct: 194 LIKAFAHRVAGTPAKHRGTNYSIINMVD---------------AMTNQPLLGYTIYTMAK 238

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            A    T   A  L      I  N V PG    
Sbjct: 239 GALEGLTRSAALELAPLQ--IRVNGVGPGLSVL 269

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 85.9 bits (213), Expect = 1e-19
 Identities = 42/243 (17%), Positives = 73/243 (30%), Gaps = 53/243 (21%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
           +   A+VTGA+  +G   A  L   G  V +   R+ A    +   +    PN     ++
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQ 66

Query: 87  LDLSSLASVRKFASEFKSSGL-----------------PLNILINNAGIMA-TPFMLSKD 128
            DLS++A+     ++  +                      ++L+NNA     TP + + +
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 129 ---------------NIELQFATNHIGHFLLTNLLLETMGKTARESSKE-GRIVNVSSRR 172
                               F +N I  + L       +  T  +       I+N+    
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD-- 184

Query: 173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGA 232
                                 ++ Y  +K A    T   A  L      I  N V PG 
Sbjct: 185 -------------AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGL 229

Query: 233 ITT 235
              
Sbjct: 230 SVL 232

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 84.8 bits (211), Expect = 2e-19
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 24/153 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
            G TAIVTG+S G+G   A  L   G ++V+       +     +          V   +
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAK 61

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATN 137
            D+ +   V         +   ++IL+NNAGI       ++D +     E  +     TN
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGI-------TRDTLMLKMSEKDWDDVLNTN 114

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
               +L T  + + M K      K G+I+N++S
Sbjct: 115 LKSAYLCTKAVSKIMLK-----QKSGKIINITS 142

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 30/155 (19%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           ID +G T+++TGASSGIG+  AR+L   G  V+++  N    + +  A+           
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTI 64

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ---------FA 135
              +L++        S+  +    L+IL+ NAGI       + D + ++           
Sbjct: 65  EVCNLANKEECSNLISKTSN----LDILVCNAGI-------TSDTLAIRMKDQDFDKVID 113

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            N   +F+L    ++ M +      + GRI+N+SS
Sbjct: 114 INLKANFILNREAIKKMIQ-----KRYGRIINISS 143

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 28/152 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                ++TGA+ GIG  T  + A  G  +V         RE  +A+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           D++  ASV +  +E  +    L+ +++ AGI       ++DN         +      N 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLRVNL 109

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            G FL+     E M +        G IV  +S
Sbjct: 110 TGSFLVAKAASEAMRE-----KNPGSIVLTAS 136

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 46/241 (19%), Positives = 78/241 (32%), Gaps = 42/241 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVV---------MAVRNMAACREVKKAIVKEIP 78
            G  A +TGA+ G G   A  +A  G  ++           V    A  +     V+ + 
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 79  NA--KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNI 130
            A  ++ A  +D      +RK      +     G  L+I++ NAG+ A   +  ++ ++ 
Sbjct: 70  AANRRIVAAVVDTRDFDRLRKVVDDGVAAL---G-RLDIIVANAGVAAPQAWDDITPEDF 125

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
                 N  G +         +     E  + G I+ +SS                    
Sbjct: 126 RDVMDINVTGTWNTVMAGAPRI----IEGGRGGSIILISS---------------AAGMK 166

Query: 191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL 250
                  Y  SK A        A  L +    I  NSVHPG + T +       +    +
Sbjct: 167 MQPFMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSGDMVTAVGQAM 224

Query: 251 L 251
            
Sbjct: 225 E 225

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 84.5 bits (210), Expect = 2e-19
 Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 22/152 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  ++VTG++ GIG   A  LA  G  V++   +    + V + I  +    K   +E+
Sbjct: 6   QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEM 64

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           +L S  S+ K   E  +    ++IL+NNAGI       ++D +      L +      N 
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI-------TRDKLFLRMSLLDWEEVLKVNL 117

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            G FL+T   L  M K      + GRIVN+SS
Sbjct: 118 TGTFLVTQNSLRKMIK-----QRWGRIVNISS 144

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 84.9 bits (211), Expect = 3e-19
 Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 26/155 (16%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
              +G  A+VTGA+ GIG   AR    +G  V +        +E+   +        V  
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFV 77

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ---------FA 135
              +LS   S+++ A   +     ++IL+NNAGI       ++D + ++          A
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI-------TRDGLFVRMQDQDWDDVLA 130

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            N      LT  L+ +M +      + GRI+N++S
Sbjct: 131 VNLTAASTLTRELIHSMMR-----RRYGRIINITS 160

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 83.7 bits (208), Expect = 4e-19
 Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 26/154 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
            G  A+VTGAS GIG   A  LA +G +VV+   N A   +    +V EI        A+
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVV---NYAGNEQKANEVVDEIKKLGSDAIAV 59

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----AT 136
             D+++   V     +       ++IL+NNAG+       +KDN+     E ++     T
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV-------TKDNLLMRMKEEEWDTVINT 112

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
           N  G FL T  +   M +      + GRIVN++S
Sbjct: 113 NLKGVFLCTKAVSRFMMR-----QRHGRIVNIAS 141

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 84.2 bits (209), Expect = 5e-19
 Identities = 56/210 (26%), Positives = 85/210 (40%), Gaps = 29/210 (13%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             +VTGASSG G   A      G  V+   R   A  ++  A        + +A+ LD++
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVT 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLTNLL 148
               +   A++  +    +++L+NNAG          ++  +   F  +  G   LT  L
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           L  M    RE    G +VN+SS   Q S+                 FSAY  +K A    
Sbjct: 122 LPQM----RE-RGSGSVVNISSFGGQLSFAG---------------FSAYSATKAALEQL 161

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLF 238
           +  LA  +   G+ +    V PGA  TNLF
Sbjct: 162 SEGLADEVAPFGIKVLI--VEPGAFRTNLF 189

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 84.6 bits (210), Expect = 5e-19
 Identities = 41/255 (16%), Positives = 87/255 (34%), Gaps = 44/255 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA--------VRNMAACREVKKAIVKEIPN 79
            G  A +TGA+ G G   A  LA  G  ++          V+   +  +     V+++  
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86

Query: 80  A--KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ 133
              ++ A ++D+    +++       ++       L+I++ NA + +    L++ + +  
Sbjct: 87  LGRRIIASQVDVRDFDAMQAAVDDGVTQLGR----LDIVLANAALASEGTRLNRMDPK-T 141

Query: 134 F----ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
           +      N  G ++   + +  +        + G IV  SS               I   
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHI----MAGKRGGSIVFTSS---------------IGGL 182

Query: 190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG 249
            G      Y  SK         +A  L      I  N V P ++ T +  N   +     
Sbjct: 183 RGAENIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSSVATPMLLNEPTYRMFRP 240

Query: 250 LLGKYVIKNVEQGAA 264
            L    +++ +  + 
Sbjct: 241 DLENPTVEDFQVASR 255

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 84.1 bits (209), Expect = 6e-19
 Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 30/213 (14%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMEL 87
           G   ++TG  SGIG   +   A  G ++ +A +       E K+ + KE    K   +  
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPG 104

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFM-LSKDNIELQFATNHIGHFLL 144
           DLS     +    E       LNIL+NN            ++ + +E  F  N   +F +
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T   L  + +          I+N +S               I    G      Y  +K A
Sbjct: 165 TKAALSHLKQG-------DVIINTAS---------------IVAYEGNETLIDYSATKGA 202

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
            V  T  L++ L + G  I  N V PG I T L
Sbjct: 203 IVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPL 233

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 83.3 bits (207), Expect = 7e-19
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 26/154 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA--KVQAM 85
              +A+VTGAS GIG   A  LA  G +V +   N A  +E  +A+V+EI        A+
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----AT 136
           + +++    V+    E  S    L++L+NNAGI       ++DN+     E ++     T
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI-------TRDNLLMRMKEQEWDDVIDT 112

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
           N  G F         M +      + G I+N+SS
Sbjct: 113 NLKGVFNCIQKATPQMLR-----QRSGAIINLSS 141

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 83.8 bits (208), Expect = 7e-19
 Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 24/153 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
           +   A+VTGAS GIG   A  LA  G  V +    +  A  EV  AI       +  A++
Sbjct: 27  TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVK 84

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATN 137
            D+S  + V    +        L++L+NNAGI       ++D +        +      N
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGI-------TRDTLLLRMKRDDWQSVLDLN 137

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
             G FL +    + M K      + GRI+N++S
Sbjct: 138 LGGVFLCSRAAAKIMLK-----QRSGRIINIAS 165

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 82.5 bits (205), Expect = 1e-18
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 24/150 (16%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDL 89
             +VTGAS GIG   A  L   G  V++   R+  A  EV K I       +      D+
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDV 60

Query: 90  SSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNHIG 140
           S  A V         +   +++++NNAGI       ++D +     + Q+      N  G
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGI-------TRDTLLIRMKKSQWDEVIDLNLTG 113

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            FL T    + M K      ++GRI+N++S
Sbjct: 114 VFLCTQAATKIMMK-----KRKGRIINIAS 138

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 83.4 bits (207), Expect = 1e-18
 Identities = 43/219 (19%), Positives = 80/219 (36%), Gaps = 37/219 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A VTG+S GIG   A   A  G  V +   +  A  + +            +A + 
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKC 90

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFMLSKDNIEL---QFATNHIGHFL 143
           ++S   SV +  S+ +     +++ + NAG+       +  DN +      + +  G + 
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
            ++ + +   K     + +G ++  SS         G   +    Q+ YN       +K 
Sbjct: 151 CSHNIGKIFKK-----NGKGSLIITSSI-------SGKIVNIPQLQAPYN---T---AK- 191

Query: 204 ANVLH-T----SELARRLKEDGVDITANSVHPGAITTNL 237
           A   H       E A            N++ PG I T++
Sbjct: 192 AACTHLAKSLAIEWAPF-------ARVNTISPGYIDTDI 223

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 81.8 bits (203), Expect = 2e-18
 Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 27/152 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM---EL 87
            A++TGAS GIG   A  LA  G  + +   +    RE  + + +E        +     
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAI---HYGQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           +L    +      +       L+ L+NNAGI       ++D +     +  +      N 
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI-------TRDTLLVRMKDEDWEAVLEANL 112

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
              F  T   ++ M K     ++ GRIVN++S
Sbjct: 113 SAVFRTTREAVKLMMK-----ARFGRIVNITS 139

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 82.3 bits (204), Expect = 3e-18
 Identities = 46/258 (17%), Positives = 76/258 (29%), Gaps = 46/258 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA------------VRNMAACREVKKAIVK 75
            G  A VTGA+ G G   A  LA  G  ++                  A+  E       
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETAD 69

Query: 76  EIPNA--KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGI--MATPFM-LS 126
            +     ++   E+D+    +++        +    G  L+I++ NAGI          S
Sbjct: 70  LVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL---G-RLDIIVANAGIGNGGDTLDKTS 125

Query: 127 KDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI 186
           +++       N  G +      +  M        + G I+  SS               +
Sbjct: 126 EEDWTEMIDINLAGVWKTVKAGVPHM----IAGGRGGSIILTSS---------------V 166

Query: 187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
                Y     Y  +K   V         L +    I  NSVHP  + T +  N   F  
Sbjct: 167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHNEGTFKM 224

Query: 247 LVGLLGKYVIKNVEQGAA 264
               L      ++     
Sbjct: 225 FRPDLENPGPDDMAPICQ 242

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 51/239 (21%), Positives = 82/239 (34%), Gaps = 46/239 (19%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVV---------MAVRNMAACREVKKAIVKEIP 78
            G  A +TGA+ G G   A  LA  G  ++          +V    A  E      + + 
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE 73

Query: 79  NA--KVQAMELDLSSLASVRKFA----SEFKSSGLPLNILINNAGIMATPFMLSKDNIEL 132
           +   K     LD+   A++R+       +F   G  L++++ NAG+    +    +  + 
Sbjct: 74  DQGRKALTRVLDVRDDAALRELVADGMEQF---G-RLDVVVANAGV--LSWGRVWELTDE 127

Query: 133 QF----ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND 188
           Q+      N  G +      +  M     E+   G IV VSS                  
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAM----IEAGNGGSIVVVSS---------------SAG 168

Query: 189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL 247
                    Y  SK      T+ LA  L E G  I  NS+HP ++ T +    +     
Sbjct: 169 LKATPGNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEPEAMMEIF 225

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 81.5 bits (202), Expect = 4e-18
 Identities = 46/227 (20%), Positives = 77/227 (33%), Gaps = 55/227 (24%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAME 86
               A++T  + G+G +    L  +G  V +    +  A   +K+         ++Q ++
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQFVQ 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATN 137
            D++    + K   E  S    ++ LINNAG         +        E ++      N
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF-----ERKKLVDYEEDEWNEMIQGN 118

Query: 138 HIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSA 197
               F L  L++  M K        GRI+N   +               +   G+   SA
Sbjct: 119 LTAVFHLLKLVVPVMRK-----QNFGRIINYGFQ----G---------ADSAPGWIYRSA 160

Query: 198 YGQSK---------LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           +  +K         +A      E A         ITAN V PG I  
Sbjct: 161 FAAAKVGLVSLTKTVA-----YEEAEY------GITANMVCPGDIIG 196

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 81.4 bits (202), Expect = 4e-18
 Identities = 48/220 (21%), Positives = 74/220 (33%), Gaps = 37/220 (16%)

Query: 28  SGLTAIVTGAS--SGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQA 84
            G   +VTGAS   G+G E AR  A  G  V +          E  K + K     K +A
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKA 77

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI-MATPFM-LSKDNIELQFATNHIGHF 142
            +  + S  S  K   +  +    ++  I NAG    +  +  S +        +  G F
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
                +     +        G +V  +S     S   G   +   +Q+ YN       +K
Sbjct: 138 HCAKAVGHHFKE-----RGTGSLVITAS----MS---GHIANFPQEQTSYN---V---AK 179

Query: 203 LANVLHTS-----ELARRLKEDGVDITANSVHPGAITTNL 237
            A  +H +     E              NS+ PG I T L
Sbjct: 180 -AGCIHMARSLANEWRDF-------ARVNSISPGYIDTGL 211

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 80.7 bits (200), Expect = 7e-18
 Identities = 46/220 (20%), Positives = 66/220 (30%), Gaps = 41/220 (18%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
              +TG++SGIG     +LA  G  V+   R  A             P  +  A+   L 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLST-----PGGRETAVAAVLD 57

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
               V             L+ L+  AG+  T       N  L  A N+ G   L + L E
Sbjct: 58  RCGGV-------------LDGLVCCAGVGVTA-----ANSGLVVAVNYFGVSALLDGLAE 99

Query: 151 TMGKTARESSKEGRIVNVSSR------RHQFSYPEGIRFDRINDQS-----GYNRFSAYG 199
            + +  +        V V S         +    E +                    AY 
Sbjct: 100 ALSRGQQ-----PAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYA 154

Query: 200 QSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
            SK A               G  +  N V PGA+ T L +
Sbjct: 155 GSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQ 192

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 79.2 bits (196), Expect = 3e-17
 Identities = 52/227 (22%), Positives = 79/227 (34%), Gaps = 37/227 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMA--------VRNMAACREVKKAIVKEIPN 79
           +G  A +TGA+ G G   A  LA  G  ++          V    A  E   A VK + +
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 80  A--KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ 133
              ++ A + D+    S+         E    G  L+I++ NAGI   P     D     
Sbjct: 72  IGSRIVARQADVRDRESLSAALQAGLDEL---G-RLDIVVANAGI--APMSAGDDGWHDV 125

Query: 134 FATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN 193
              N  G +    + + T+     +    G IV +SS         G+     +   G  
Sbjct: 126 IDVNLTGVYHTIKVAIPTL----VKQGTGGSIVLISSS-------AGLA-GVGSADPG-- 171

Query: 194 RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
               Y  +K   V      A  L      I  NS+HP  + T +  N
Sbjct: 172 -SVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINN 215

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 78.3 bits (194), Expect = 3e-17
 Identities = 46/218 (21%), Positives = 70/218 (32%), Gaps = 51/218 (23%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTG S GIG   A  L  RG  V +A RN     +   A+           +  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV----------PLPTDLE 53

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLLTNLL 148
                +        +   L++L++ A +    P + LS +        +    FLL    
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK------ 202
              M +     +  GR++ + S     +              G     AY  +K      
Sbjct: 113 APHMAE-----AGWGRVLFIGSVTTFTA-------------GGPVPIPAYTTAKTALLGL 154

Query: 203 ---LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
              LA      E AR        I  N + PG + T  
Sbjct: 155 TRALAK-----EWARL------GIRVNLLCPGYVETEF 181

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 78.4 bits (194), Expect = 9e-17
 Identities = 58/266 (21%), Positives = 95/266 (35%), Gaps = 63/266 (23%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVV--------MAVRNMAACREVKKAIVKEIPN 79
            G  A +TGA+ G G   A  LA  G  +V          +       E  K  V+ +  
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE 104

Query: 80  A--KVQAMELDLSSLASVRKFA----SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ 133
              ++ A + D+  LAS++       +EF      ++IL++N GI  +         + Q
Sbjct: 105 QGRRIIARQADVRDLASLQAVVDEALAEFGH----IDILVSNVGI--SNQGEVVSLTDQQ 158

Query: 134 F----ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
           +     TN IG +     +L +M +  +     G ++ VSS                   
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQ----GGSVIFVSS---------------TVGL 199

Query: 190 SGYNRFSAYGQSK---------LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            G    S Y  SK         LAN     E+ R       +I  NSV+PGA+ T +  N
Sbjct: 200 RGAPGQSHYAASKHGVQGLMLSLAN-----EVGRH------NIRVNSVNPGAVNTEMALN 248

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATT 266
                  +  L     ++  +  +  
Sbjct: 249 EKLLKMFLPHLENPTREDAAELFSQL 274

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 75.7 bits (187), Expect = 4e-16
 Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 34/152 (22%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              + +VTG + GIG   AR  A  G  V +  R+                     A++ 
Sbjct: 20  MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKC 66

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           D++    V +   E + +  P+ +LI NAG+       +KD +     E  F     TN 
Sbjct: 67  DITDTEQVEQAYKEIEETHGPVEVLIANAGV-------TKDQLLMRMSEEDFTSVVETNL 119

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            G F +       M +     +K+GR+V +SS
Sbjct: 120 TGTFRVVKRANRAMLR-----AKKGRVVLISS 146

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 75.7 bits (187), Expect = 4e-16
 Identities = 33/152 (21%), Positives = 60/152 (39%), Gaps = 34/152 (22%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              + +VTG + GIG   A+ LA  G  V +  R   A                +  +E+
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEV 60

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNI-----ELQF----ATNH 138
           D++   +V +  +  +    P+ +L++NAG+       S D       E +F      N 
Sbjct: 61  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL-------SADAFLMRMTEEKFEKVINANL 113

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSS 170
            G F +      +M +     +K GR++ + S
Sbjct: 114 TGAFRVAQRASRSMQR-----NKFGRMIFIGS 140

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 75.6 bits (187), Expect = 6e-16
 Identities = 60/266 (22%), Positives = 91/266 (34%), Gaps = 64/266 (24%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVV--------MAVRNMAACREVKKAIVKEIPN 79
            G TA++TG + G+G   A  LA  G  +           V    A  +     V  +  
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK 68

Query: 80  A--KVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ 133
              +  + ++D+   A++  F              ++I I NAGI  +   L  +    Q
Sbjct: 69  TGRRCISAKVDVKDRAALESFVAEAEDTLGG----IDIAITNAGI--STIALLPEVESAQ 122

Query: 134 F----ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ 189
           +     TN  G F     +   M K        GRIV VSS               +   
Sbjct: 123 WDEVIGTNLTGTFNTIAAVAPGMIK-----RNYGRIVTVSS---------------MLGH 162

Query: 190 SGYNRFSAYGQSK---------LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           S     ++Y  SK          A+     +L          IT N+V PG I T +  N
Sbjct: 163 SANFAQASYVSSKWGVIGLTKCAAH-----DLVGY------GITVNAVAPGNIETPMTHN 211

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATT 266
              F  +   L K  +K+VE   A+ 
Sbjct: 212 DFVFGTMRPDLEKPTLKDVESVFASL 237

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 70.5 bits (173), Expect = 5e-14
 Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 36/223 (16%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVV-----MAVRNMAACREVKKAIVKE 76
              +   G   +VTGA  G+G   A   A RG  VV        + +         +V+E
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 77  IPNAKVQAMELDLSSLASVRK-FASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQ 133
           I     +A+  +  S+ +  K   +   + G  +++++NNAGI+   +   +S ++ ++ 
Sbjct: 62  IRRRGGKAV-ANYDSVEAGEKLVKTALDTFG-RIDVVVNNAGILRDRSFSRISDEDWDII 119

Query: 134 FATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN 193
              +  G F +T    + M    ++ +  GRI+  +S         GI          Y 
Sbjct: 120 QRVHLRGSFQVTRAAWDHM----KKQNY-GRIIMTAS-------ASGI----------YG 157

Query: 194 RF--SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
            F  + Y  +KL  +   + L    +++   I  N++ P A +
Sbjct: 158 NFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGS 198

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 70.9 bits (174), Expect = 8e-14
 Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 42/223 (18%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVV-----MAVRNMAACREVKKAIVKEIPN 79
           +D      I+TGA  G+G   +   A  G  VV      A+       +    +V EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 80  AKVQAMELDLSSLASVRKF----ASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQ 133
               A+  D +++    K        F +    ++++INNAGI+  A+   +++ + +L 
Sbjct: 64  NGGVAV-ADYNNVLDGDKIVETAVKNFGT----VHVIINNAGILRDASMKKMTEKDYKLV 118

Query: 134 FATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYN 193
              +  G F +T           ++    GRIVN SS       P G+          Y 
Sbjct: 119 IDVHLNGAFAVTKAAWPYF----QKQKY-GRIVNTSS-------PAGL----------YG 156

Query: 194 RF--SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
            F  + Y  +K A +     LA+   +    I AN++ P A +
Sbjct: 157 NFGQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPLARS 197

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 38/213 (17%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                ++TGA +G+G E A+  A  G  VV  V +     +     V EI  A  +A   
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVV--VNDFKDATKT----VDEIKAAGGEAW-- 372

Query: 88  DLSSLASVRKFASEFKSSGLP----LNILINNAGIM-ATPFM-LSKDNIELQFATNHIGH 141
                  V K +     + +     ++IL+NNAGI+    F  +SK   +     + IG 
Sbjct: 373 --PDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGT 430

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQS 201
           F L+ L          E    GRI+N++S    +               G    + Y  S
Sbjct: 431 FNLSRLAWPYF----VEKQF-GRIINITSTSGIY---------------GNFGQANYSSS 470

Query: 202 KLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
           K   +  +  +A    ++   I  N V P A T
Sbjct: 471 KAGILGLSKTMAIEGAKNN--IKVNIVAPHAET 501

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 66.6 bits (163), Expect = 9e-13
 Identities = 51/227 (22%), Positives = 79/227 (34%), Gaps = 48/227 (21%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVV------MAVRNMAACREVKKAIVKEIPNAKV 82
           G   IVTGA  GIG   A   A  G  VV          + A+     +++V EI  A  
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86

Query: 83  QAMELDLSSLASVRKFAS----------EFKSSGLPLNILINNAGIM--ATPFMLSKDNI 130
           +A+    +  ++V  +             F      L++L+NNAGI+        S++  
Sbjct: 87  EAV----ADGSNVADWDQAAGLIQTAVETFGG----LDVLVNNAGIVRDRMIANTSEEEF 138

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIRFDRINDQ 189
           +   A +  GHF             ++      GRI+N SS         G+        
Sbjct: 139 DAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS-------GAGL-------- 183

Query: 190 SGYNRF--SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
                     Y  +K      T   A  +   G  +T N++ P A T
Sbjct: 184 --QGSVGQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPSART 226

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 53/227 (23%), Positives = 85/227 (37%), Gaps = 50/227 (22%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVM-----AVRNMAACREVKKAIVKEIPN 79
           +   G  A+VTGA +G+G E A + A RG  VV+           A +     +V EI  
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK 74

Query: 80  AKVQAMELDLSSLASVRKFAS-------EFKSSGLPLNILINNAGIM--ATPFMLSKDNI 130
           A  +A+    +   SV   A         F      ++IL+NNAGI+   +    S+ + 
Sbjct: 75  AGGEAV----ADYNSVIDGAKVIETAIKAFGR----VDILVNNAGILRDRSLVKTSEQDW 126

Query: 131 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS 190
            L    +  G F  T      M    ++ +  GRI+  SS                   S
Sbjct: 127 NLVNDVHLKGSFKCTQAAFPYM----KKQNY-GRIIMTSS------------------NS 163

Query: 191 G-YNRF--SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT 234
           G Y  F    Y  +K+  +   + +A     +   +  N + P A +
Sbjct: 164 GIYGNFGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAAS 208

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 60.7 bits (147), Expect = 8e-11
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 10/98 (10%)

Query: 20  EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN 79
               G    G  A+V   +  +G  +A +LA  G  VV+  R +   +    ++ K    
Sbjct: 110 VKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKV 169

Query: 80  AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAG 117
               A   + +  AS  +            + +     
Sbjct: 170 NVTAA---ETADDASRAEAVKG-------AHFVFTAGA 197

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 49/216 (22%)

Query: 26  DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
            G+ +   V GA+  +G   AR +   G  +V+  R  +  + +           + +  
Sbjct: 10  PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA--------YLEPECR 61

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGI-----MATPFMLSKDNIELQFATNHIG 140
             ++   A + +                   G+      A  +       + + A+    
Sbjct: 62  VAEMLDHAGLERAL----------------RGLDGVIFSAGYYPSRPRRWQEEVASALGQ 105

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD--RINDQSGYNRFSAY 198
               TN           + ++  RI+ V S      +P+G+        D     + S+Y
Sbjct: 106 ----TNPFYA----ACLQ-ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK-SSY 155

Query: 199 GQSKLANVLHTSE-LARRLKEDGVDITANSVHPGAI 233
              K A      +  AR    +G+ +      PG +
Sbjct: 156 VLCKWA-----LDEQAREQARNGLPVVI--GIPGMV 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.92
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.9
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.87
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.87
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.87
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.86
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.85
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.85
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.84
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.83
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.83
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.82
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.82
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.82
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.81
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.79
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.78
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.77
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.77
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.75
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.75
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.74
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.73
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.72
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.69
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.68
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.64
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.64
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.63
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.63
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.61
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.61
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.58
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.55
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.55
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.52
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.48
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.41
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.39
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.38
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.05
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.0
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.89
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.79
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.75
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.74
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.72
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.59
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.56
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.55
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.55
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.51
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.5
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.49
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.46
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.32
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.31
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.31
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.3
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.3
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.28
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.23
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.21
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.2
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.2
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.19
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.18
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.17
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.15
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.11
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.05
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.0
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.99
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.97
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.97
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.96
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.96
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.95
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.94
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.9
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.89
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.85
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.8
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.8
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.79
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.78
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.74
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.73
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.72
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.7
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.7
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.69
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.67
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.66
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.66
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.65
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.6
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.58
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.57
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.53
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.52
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.52
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.5
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.48
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.46
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.44
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.41
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.36
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.35
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.34
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.32
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.31
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.3
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.27
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.27
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.27
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.26
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.24
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.24
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.22
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.22
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.19
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.19
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.18
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.15
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.14
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.13
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.09
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.03
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.03
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.03
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.03
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.98
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.98
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.96
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.94
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.93
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.9
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.88
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.86
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.85
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.84
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.84
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.78
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.76
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.75
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.74
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.72
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.7
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.69
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.69
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.62
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.61
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.57
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.56
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.53
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.53
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.5
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.47
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.46
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.42
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.42
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.4
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.38
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.37
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.34
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.33
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.3
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.29
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.26
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.26
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.25
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.23
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.22
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.21
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.2
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.19
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.13
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.03
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.01
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.98
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.97
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.93
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.92
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.91
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.87
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.87
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.86
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.86
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.86
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.85
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.81
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.81
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.8
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.77
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.75
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.75
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.74
1lnq_A	336	MTHK channels, potassium channel related protein;	95.72
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.72
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.7
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.69
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.68
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.66
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.66
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.65
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.6
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.58
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.56
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.55
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.53
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.5
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.47
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.47
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.47

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.7e-52  Score=363.48  Aligned_cols=243  Identities=23%  Similarity=0.287  Sum_probs=218.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..+++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++.++++|+++++++++++++
T Consensus         2 s~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            2 TALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             -CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHH
Confidence            4467999999999999999999999999999999999999999999999999877  66899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+++|++|+||||||+...  ..+.+.++|++.+++|+.|+|+++|+++|+|.++    ++.|+||++||..+..+.|+
T Consensus        80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~----~~~G~IVnisS~~~~~~~~~  155 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR----NSGGKIINIGSLTSQAARPT  155 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSBCTT
T ss_pred             HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----cCCCEEEEEeehhhcCCCCC
Confidence            99999999999999998654  4478889999999999999999999999999754    24789999999999986554


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (319)
                                     ...|++||+++.+|+|+||.|++++|  ||||+|+||+++|++....    .....+...+|..+
T Consensus       156 ---------------~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R  218 (255)
T 4g81_D          156 ---------------VAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR  218 (255)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS
T ss_pred             ---------------chhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC
Confidence                           68899999999999999999999999  9999999999999987654    22334556678888


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.++||+ |+.++++||+.+. |+|+
T Consensus       219 ~g~pediA~~v~fL~-S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          219 WGRPEELIGTAIFLS-SKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             CBCGGGGHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHh-CchhCCCcCCEEEECCCe
Confidence            999999999999999 7999999999888 6664

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.5e-51  Score=361.15  Aligned_cols=240  Identities=24%  Similarity=0.217  Sum_probs=213.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++++..  +.++.++++|++++++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999776  67899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++|++|+||||||+...   ..+.+.++|++++++|+.|+|+++|+++|+|+++     +.|+||++||.++..+.|+  
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~~g~~~~~~--  153 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-----GKGVIVNTASIAGIRGGFA--  153 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCSSSS--
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhcCCCCC--
Confidence            99999999999997643   3467889999999999999999999999999886     4799999999999986554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHHH-HHhhhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLVG-LLGKYV  255 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~-~~~~~~  255 (319)
                                   ...|++||+|+.+|+|+||.|++++|  ||||+|+||+++|++.....     ......+ ..+..+
T Consensus       154 -------------~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R  218 (254)
T 4fn4_A          154 -------------GAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSR  218 (254)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCC
T ss_pred             -------------ChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCC
Confidence                         67899999999999999999999999  99999999999999875541     1122222 234577


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +.+|+|+|++++||+ |+.++++||+.|. |+|..
T Consensus       219 ~g~pediA~~v~fLa-Sd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          219 LAEPEDIANVIVFLA-SDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHh-CchhcCCcCCEEEeCCCcc
Confidence            889999999999999 7999999999888 66653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.5e-50  Score=355.73  Aligned_cols=233  Identities=21%  Similarity=0.279  Sum_probs=205.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++..+++|++++++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999988887776     667899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.|+++++|+++|+|++       .|+||+++|..+..+.|+    
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~~~~~----  169 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGSTGTPA----  169 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGSCCTT----
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhccCCCC----
Confidence            9999999999998544  457888999999999999999999999999965       579999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---------hHHHHHHHHhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---------FFSGLVGLLGKY  254 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~  254 (319)
                                 ...|++||+|+.+|+|+||.|++++|  ||||+|+||+++|++.....         ....+...+|..
T Consensus       170 -----------~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg  236 (273)
T 4fgs_A          170 -----------FSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG  236 (273)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC
Confidence                       68999999999999999999999999  99999999999999876541         223455567888


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       237 R~g~peeiA~~v~FLa-Sd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          237 RVGRAEEVAAAALFLA-SDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTT
T ss_pred             CCcCHHHHHHHHHHHh-CchhcCccCCeEeECcCh
Confidence            8999999999999999 7999999999888 5554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=8.3e-50  Score=351.45  Aligned_cols=242  Identities=23%  Similarity=0.287  Sum_probs=208.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.  +.++.++.+|++++++++++++++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999876643 34555555  6689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++||++|+||||||+... +.+.+.++|++.+++|+.+++.++|+++|+|++.      +|+||++||..+..+.|+   
T Consensus        79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~~---  149 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVTGQGN---  149 (258)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHHCCSS---
T ss_pred             HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhccCCCC---
Confidence            999999999999998654 4467889999999999999999999999999764      689999999999986554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------hHHHHHHHHhh-
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------FFSGLVGLLGK-  253 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~-  253 (319)
                                  ...|++||+|+.+|+|+||.|++++|  ||||+|+||+++|++.+...        ....+...+|. 
T Consensus       150 ------------~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg  215 (258)
T 4gkb_A          150 ------------TSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG  215 (258)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC
Confidence                        68999999999999999999999999  99999999999999987541        12233344555 


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      .++.+|+|+|+.++||+ |+.++++||+.|. |+|+..+.
T Consensus       216 ~R~g~peeiA~~v~fLa-S~~a~~iTG~~i~VDGG~T~l~  254 (258)
T 4gkb_A          216 RRFTTPDEIADTAVFLL-SPRASHTTGEWLFVDGGYTHLD  254 (258)
T ss_dssp             TSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTTTTSC
T ss_pred             CCCcCHHHHHHHHHHHh-CchhcCccCCeEEECCCcchhh
Confidence            37889999999999999 7999999999888 77776543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-49  Score=346.26  Aligned_cols=236  Identities=22%  Similarity=0.282  Sum_probs=204.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..+++|+||++|||||++|||+++|+.|+++|++|++++|+..  +++.+.+.+.  +.++.++.+|++++++++++++ 
T Consensus         2 ~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~-   76 (247)
T 4hp8_A            2 KNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT-   76 (247)
T ss_dssp             -CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST-
T ss_pred             cCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH-
Confidence            3457899999999999999999999999999999999999854  3555666555  6689999999999998877653 


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                          ++++|+||||||+...  ..+.+.++|++.+++|+.|+|+++|+++|+|.++    ++.|+||++||..+..+.|+
T Consensus        77 ----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~----g~~G~IVnisS~~~~~g~~~  148 (247)
T 4hp8_A           77 ----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK----GRSGKVVNIASLLSFQGGIR  148 (247)
T ss_dssp             ----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCSS
T ss_pred             ----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----CCCcEEEEEechhhCCCCCC
Confidence                5799999999998654  4478889999999999999999999999999865    24789999999999986554


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~  255 (319)
                                     ...|++||+++.+|+|+||.|++++|  ||||+|+||+++|++....    ...+.+.+.+|..+
T Consensus       149 ---------------~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR  211 (247)
T 4hp8_A          149 ---------------VPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEALRADAARNKAILERIPAGR  211 (247)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS
T ss_pred             ---------------ChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC
Confidence                           68999999999999999999999999  9999999999999997654    22334556678888


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.++||+ |+.++++||+.|. |+|+
T Consensus       212 ~g~peeiA~~v~fLa-Sd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          212 WGHSEDIAGAAVFLS-SAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             CBCTHHHHHHHHHHT-SGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHh-CchhcCCcCCeEEECccc
Confidence            999999999999999 7999999999888 6554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.8e-49  Score=342.33  Aligned_cols=226  Identities=24%  Similarity=0.278  Sum_probs=197.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++        ..+.++..+.+|++++++++++++    ++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            489999999999999999999999999999999999765442        115689999999999999988775    47


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |++|+||||||+..+..+.+.++|++.+++|+.|+++++|+++|+|+++      .|+||++||..+..+.|+       
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~~~~-------  143 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTFGSAD-------  143 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTSCCSS-------
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccCCCCC-------
Confidence            8999999999998777778889999999999999999999999999763      689999999999986554       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcCCHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~v  262 (319)
                              ...|++||+++.+|+|+|+.|++++|  ||||+|+||+++|+|....    ...+.+.+.+|..++.+|+|+
T Consensus       144 --------~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peei  213 (242)
T 4b79_A          144 --------RPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEV  213 (242)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence                    68999999999999999999999999  9999999999999997665    234456667788899999999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+.++||+ |+.++++||+.+. |+|+
T Consensus       214 A~~v~fLa-Sd~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          214 ASAAAFLC-GPGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHh-CchhcCccCceEEECccH
Confidence            99999999 7999999999888 6664

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.1e-47  Score=337.16  Aligned_cols=240  Identities=16%  Similarity=0.167  Sum_probs=211.5

Q ss_pred             CCCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+.+.. +.++.++++|+++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHH
Confidence            5789999999999875  99999999999999999999999988888877776543 56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          102 FKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +.+++|++|+||||||+...      ..+.+.++|...+++|+.+.+.+++.+.+++++       .|+||++||.++..
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~  152 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEF  152 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTS
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEecccccc
Confidence            99999999999999997543      224566789999999999999999999887754       68999999999998


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLL  251 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~  251 (319)
                      +.|+               +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....    ..+.+.+..
T Consensus       153 ~~~~---------------~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  215 (256)
T 4fs3_A          153 AVQN---------------YNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKERA  215 (256)
T ss_dssp             CCTT---------------THHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS
T ss_pred             Cccc---------------chhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHhcC
Confidence            6554               68999999999999999999999999  99999999999999987663    334455667


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |..++.+|+|+|++++||+ |+.++++||+.|. |+|+.
T Consensus       216 Pl~R~g~peevA~~v~fL~-Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          216 PLKRNVDQVEVGKTAAYLL-SDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             TTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHh-CchhcCccCCEEEECcCHH
Confidence            8888999999999999999 7999999999888 66654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.7e-47  Score=332.70  Aligned_cols=226  Identities=20%  Similarity=0.220  Sum_probs=198.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|+||||||++|||+++|++|+++|++|++++|+++.++++.+    +  ..++.++++|++++++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6999999999999999999999999999999999877665433    3  557899999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|+|.++      +|+||++||..+..+.|+       
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~~~~~-------  142 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQSEPD-------  142 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTSCCTT-------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeecccccCCCC-------
Confidence            9999999998654  4467889999999999999999999999999874      699999999999986554       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                              ...|++||+++.+|+|+||.|+++ |  ||||+|+||+++|++....  .......+|..++.+|+|+|+++
T Consensus       143 --------~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~--~~~~~~~~Pl~R~g~pediA~~v  209 (247)
T 3ged_A          143 --------SEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEF--TQEDCAAIPAGKVGTPKDISNMV  209 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---C--CHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHH--HHHHHhcCCCCCCcCHHHHHHHH
Confidence                    689999999999999999999987 7  9999999999999987654  45566678888999999999999


Q ss_pred             HHHhcCCCccCCCccccc-CCccc
Q 020927          267 CYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +||++   ++++||+.+. |+|..
T Consensus       210 ~fL~s---~~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          210 LFLCQ---QDFITGETIIVDGGMS  230 (247)
T ss_dssp             HHHHH---CSSCCSCEEEESTTGG
T ss_pred             HHHHh---CCCCCCCeEEECcCHH
Confidence            99994   3699999888 66654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=9.1e-48  Score=339.40  Aligned_cols=234  Identities=19%  Similarity=0.234  Sum_probs=200.4

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      +...|+|+||++|||||++|||+++|++|+++|++|++++|+.+.          .  ..+..++++|++++++++++++
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~--~~~~~~~~~Dv~~~~~v~~~~~   70 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------G--LPEELFVEADLTTKEGCAIVAE   70 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------T--SCTTTEEECCTTSHHHHHHHHH
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------C--CCcEEEEEcCCCCHHHHHHHHH
Confidence            445579999999999999999999999999999999999997531          0  2345578999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          101 EFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++.+++|++|+||||||+...    ..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||+++|..+..+
T Consensus        71 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Iv~isS~~~~~~  145 (261)
T 4h15_A           71 ATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-----GSGVVVHVTSIQRVLP  145 (261)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSC
T ss_pred             HHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-----CCceEEEEEehhhccC
Confidence            999999999999999997532    3467889999999999999999999999999875     4789999999999876


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------------
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------------  242 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------------  242 (319)
                      .|.              +...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....              
T Consensus       146 ~~~--------------~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~  209 (261)
T 4h15_A          146 LPE--------------STTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVRLAERLAKQAGTDLEGG  209 (261)
T ss_dssp             CTT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             CCC--------------ccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhhhhHHHHHhhccchhhH
Confidence            543              357899999999999999999999999  99999999999999865431              


Q ss_pred             --hHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          243 --FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       243 --~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                        ........+|.+++.+|||+|+.++||+ |+.++++||+.|. |+|.
T Consensus       210 ~~~~~~~~~~~PlgR~g~peevA~~v~fLa-S~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          210 KKIIMDGLGGIPLGRPAKPEEVANLIAFLA-SDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHTTCCTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhcCCCCCCCcCHHHHHHHHHHHh-CchhcCccCcEEEECCcC
Confidence              0111122356778889999999999999 7999999999888 5554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2e-44  Score=316.61  Aligned_cols=238  Identities=24%  Similarity=0.353  Sum_probs=209.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+.+     +.+..++.+|++++++++++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceEEEEeCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998888877766     335788999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|.++     +.|+||++||..+..+.|  
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  150 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-----RQGRIINVGSVVGTMGNA--  150 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT--
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCC--
Confidence            9999999999999998654  3456889999999999999999999999999875     478999999999988654  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                   ++..|++||+++++|+++++.|++++|  |+||+|+||+++|++.....  .........+..++.+
T Consensus       151 -------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~  215 (248)
T 3op4_A          151 -------------GQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGD  215 (248)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBC
T ss_pred             -------------CChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcC
Confidence                         368999999999999999999999999  99999999999999987652  2233444556677889


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       216 p~dva~~v~~L~-s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          216 PREIASAVAFLA-SPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHc-CCccCCccCcEEEECCCe
Confidence            999999999999 6889999999888 5554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.9e-44  Score=318.68  Aligned_cols=242  Identities=21%  Similarity=0.217  Sum_probs=212.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....++.++.++.+|++++++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999988876666679999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|+++     +.++||++||..+..+.|   
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  154 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-----ADAAIVCVNSLLASQPEP---  154 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-----TTEEEEEEEEGGGTSCCT---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----CCeEEEEECCcccCCCCC---
Confidence            999999999999998644  3467789999999999999999999999999864     478999999999988655   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----------hHHHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----------FFSGLVGL  250 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~  250 (319)
                                  ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++.....           ........
T Consensus       155 ------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
T 3lf2_A          155 ------------HMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLAR  220 (265)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHH
T ss_pred             ------------CchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhh
Confidence                        378999999999999999999999999  99999999999999865321           11111112


Q ss_pred             ---HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          251 ---LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       251 ---~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                         .+..++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       221 ~~~~p~~r~~~pedvA~~v~fL~-s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          221 NKQIPLGRLGKPIEAARAILFLA-SPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             HTTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSEEEEESSSC
T ss_pred             ccCCCcCCCcCHHHHHHHHHHHh-CchhcCcCCCEEEECCCC
Confidence               56677789999999999999 7899999999888 5554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.8e-44  Score=317.19  Aligned_cols=241  Identities=24%  Similarity=0.301  Sum_probs=212.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999888888765  568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++++|+||||||+... ..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..+.|   
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  155 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-----GGGAILNISSMAGENTNV---  155 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTCCCT---
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHHHcCCCC---
Confidence            9999999999999998654 2367789999999999999999999999999874     478999999999987654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (319)
                                  +...|++||+++++|+++++.|++++|  |+||+|+||++.|++....   .....+....+..++.+
T Consensus       156 ------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~  221 (256)
T 3gaf_A          156 ------------RMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGE  221 (256)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBC
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCC
Confidence                        368999999999999999999999999  9999999999999986543   22233334456677889


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|++++||+ ++.+.+++|+.+. ++|.
T Consensus       222 ~~dva~~~~~L~-s~~~~~itG~~i~vdgG~  251 (256)
T 3gaf_A          222 AQDIANAALFLC-SPAAAWISGQVLTVSGGG  251 (256)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHc-CCcccCccCCEEEECCCc
Confidence            999999999999 6889999999888 5554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.7e-44  Score=319.86  Aligned_cols=240  Identities=21%  Similarity=0.286  Sum_probs=212.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999988888765  5679999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|+++     +.|+||++||..+..+.|   
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~---  170 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-----GYGKIVNIGSLTSELARA---  170 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCT---
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhCCCCC---
Confidence            999999999999998654  3467889999999999999999999999999875     368999999999887644   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                  +...|++||+++++|++.|+.|++++|  |+||+|+||++.|++....    .+...+....+..++.
T Consensus       171 ------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  236 (271)
T 4ibo_A          171 ------------TVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWG  236 (271)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCB
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCc
Confidence                        368899999999999999999999999  9999999999999987654    2223344556777788


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       237 ~pedva~~v~~L~-s~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          237 KPQELVGTAVFLS-ASASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             CGGGGHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHh-CccccCCCCcEEEECCCe
Confidence            9999999999999 6889999999888 5553

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.7e-44  Score=319.03  Aligned_cols=256  Identities=22%  Similarity=0.286  Sum_probs=202.2

Q ss_pred             ccccCCCCCCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCce
Q 020927            3 RLSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV   82 (319)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v   82 (319)
                      +|++++..++....+-+.  .+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++
T Consensus         3 ~~~~~~~~~~~~~~~g~~--~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~   75 (266)
T 3grp_A            3 HHHHHHMGTLEAQTQGPG--SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDV   75 (266)
T ss_dssp             --------------------CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSE
T ss_pred             CCCccccccccCCCCCCc--chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCce
Confidence            455555555544333332  357899999999999999999999999999999999999998887776554     5689


Q ss_pred             EEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCC
Q 020927           83 QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESS  160 (319)
Q Consensus        83 ~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~  160 (319)
                      .++.+|++++++++++++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     
T Consensus        76 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----  150 (266)
T 3grp_A           76 FVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-----  150 (266)
T ss_dssp             EEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----
T ss_pred             EEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence            999999999999999999999999999999999998654  3456778999999999999999999999999875     


Q ss_pred             CCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          161 KEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       161 ~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                      +.|+||++||..+..+.|               +...|++||+|+++|+++++.|++++|  |+||+|+||++.|++...
T Consensus       151 ~~g~Iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~  213 (266)
T 3grp_A          151 RYGRIINITSIVGVVGNP---------------GQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDK  213 (266)
T ss_dssp             TCEEEEEECCC----------------------CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHT
T ss_pred             CCcEEEEECCHHHcCCCC---------------CchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhc
Confidence            478999999999887544               368999999999999999999999999  999999999999998765


Q ss_pred             ch--hHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          241 IS--FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       241 ~~--~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..  ....+....+..++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       214 ~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~-s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          214 LNEKQKEAIMAMIPMKRMGIGEEIAFATVYLA-SDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             CCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCCEEEECCCe
Confidence            52  2233444456777889999999999999 6888999999888 5554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.6e-44  Score=319.14  Aligned_cols=247  Identities=23%  Similarity=0.302  Sum_probs=214.4

Q ss_pred             cccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           19 EEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        19 ~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      +.+..+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++++++++
T Consensus        10 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~   88 (266)
T 4egf_A           10 DRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAEL   88 (266)
T ss_dssp             CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHH
T ss_pred             hhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHH
Confidence            34455678999999999999999999999999999999999999999998888886633 56899999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+
T Consensus        89 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~~  164 (266)
T 4egf_A           89 ARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAG----EGGAIITVASAAALAP  164 (266)
T ss_dssp             HHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEEcchhhccC
Confidence            99999999999999999998654  34677889999999999999999999999998752    3679999999999876


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~  252 (319)
                      .|               +...|++||+++++|+++|+.|++++|  |+||+|+||++.|++....    .....+....+
T Consensus       165 ~~---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  227 (266)
T 4egf_A          165 LP---------------DHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP  227 (266)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT
T ss_pred             CC---------------CChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC
Confidence            54               368999999999999999999999999  9999999999999986543    22233444456


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       228 ~~r~~~p~dva~~v~~L~-s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          228 LGRFAVPHEVSDAVVWLA-SDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             TSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHh-CchhcCccCcEEEECCCc
Confidence            677889999999999999 6889999999888 5554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.8e-44  Score=319.64  Aligned_cols=241  Identities=27%  Similarity=0.324  Sum_probs=210.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+...  +.++.++.+|++++++++++++++
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999999999888888776  567889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.++     +.|+||++||..+..+.|  
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  172 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-----RGGRIVNITSVVGSAGNP--  172 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT--
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCCC--
Confidence            9999999999999998654  3456789999999999999999999999999875     478999999999988654  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                   ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++.....  ....+....+..++.+
T Consensus       173 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~  237 (270)
T 3ftp_A          173 -------------GQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGS  237 (270)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBC
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCC
Confidence                         378999999999999999999999999  99999999999999876542  1222333455667789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|++++||+ ++...+++|+.+. ++|.
T Consensus       238 pedvA~~v~~L~-s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          238 PEDIAHAVAFLA-SPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHh-CCCcCCccCcEEEECCCc
Confidence            999999999999 6889999999888 5443

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7e-44  Score=315.72  Aligned_cols=244  Identities=24%  Similarity=0.295  Sum_probs=212.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ++++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... ..++.++.+|++++++++++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999998888887652 368999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p~  179 (319)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|+++     +.++||++||..+. .+.| 
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~~-  156 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-----GSGRVVLTSSITGPITGYP-  156 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----SSCEEEEECCSBTTTBCCT-
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEechhhccCCCC-
Confidence            9999999999999998654  3467889999999999999999999999999875     36899999999876 4333 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcC
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~  257 (319)
                                    ++..|++||++++.|+++++.|++++|  |+||+|+||++.|++....  .....+....+..++.
T Consensus       157 --------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~  220 (262)
T 3pk0_A          157 --------------GWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALG  220 (262)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCB
T ss_pred             --------------CChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCc
Confidence                          468999999999999999999999999  9999999999999976544  2233444456677788


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      +|+|+|++++||+ ++.+.++||+.+. |+|...
T Consensus       221 ~p~dva~~v~~L~-s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          221 TPEDIGHLAAFLA-TKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTTTC
T ss_pred             CHHHHHHHHHHHh-CccccCCcCCEEEECCCeec
Confidence            9999999999999 6889999999888 555443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.4e-44  Score=318.98  Aligned_cols=262  Identities=27%  Similarity=0.244  Sum_probs=204.5

Q ss_pred             cccCCCCCCCCCCcccccc-cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCce
Q 020927            4 LSSKGASGFSSSSTAEEVT-QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV   82 (319)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~-~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v   82 (319)
                      |.+++++.-+........- .++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~   79 (283)
T 3v8b_A            2 HHHHHHSSGVDLGTENLYFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQA   79 (283)
T ss_dssp             -------------------------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCE
T ss_pred             CCccCCccccccccchhhhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcE
Confidence            3445555544443333333 457889999999999999999999999999999999999999998888887654  5689


Q ss_pred             EEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccC
Q 020927           83 QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARES  159 (319)
Q Consensus        83 ~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~  159 (319)
                      .++.+|++++++++++++++.++++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|+|+++    
T Consensus        80 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----  155 (283)
T 3v8b_A           80 IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR----  155 (283)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----
Confidence            99999999999999999999999999999999999853   24467889999999999999999999999999875    


Q ss_pred             CCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 020927          160 SKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR  239 (319)
Q Consensus       160 ~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~  239 (319)
                       +.++||++||..+....+             ..+...|++||+++++|+++|+.|++++|  |+||+|+||+++|++..
T Consensus       156 -~~g~Iv~isS~~~~~~~~-------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~  219 (283)
T 3v8b_A          156 -GGGAIVVVSSINGTRTFT-------------TPGATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISD  219 (283)
T ss_dssp             -TCEEEEEECCSBTTTBCC-------------STTCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTC
T ss_pred             -CCceEEEEcChhhccCCC-------------CCCchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCccc
Confidence             378999999998876211             12367899999999999999999999999  99999999999999976


Q ss_pred             CchhHHHH---------HHHHhh--hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          240 NISFFSGL---------VGLLGK--YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       240 ~~~~~~~~---------~~~~~~--~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ........         ....+.  .++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          220 NTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV-SERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             CTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTH
T ss_pred             ccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHc-CccccCCcCCEEEECcCc
Confidence            54211111         111233  66789999999999999 7899999999888 5553

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.4e-44  Score=321.32  Aligned_cols=262  Identities=23%  Similarity=0.287  Sum_probs=212.8

Q ss_pred             ccCCCCCCCCC--CcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCce
Q 020927            5 SSKGASGFSSS--STAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV   82 (319)
Q Consensus         5 ~~~~~~~~~~~--~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v   82 (319)
                      ++|++..+...  +.+.+...+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... ..++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~   93 (293)
T 3rih_A           15 QTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNV   93 (293)
T ss_dssp             -------------------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCE
T ss_pred             hhcCCceeeeecCCCCcccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcE
Confidence            34444444333  33334455688999999999999999999999999999999999999998888888876542 3589


Q ss_pred             EEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCC
Q 020927           83 QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESS  160 (319)
Q Consensus        83 ~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~  160 (319)
                      .++.+|++++++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|+++     
T Consensus        94 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----  168 (293)
T 3rih_A           94 IGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-----  168 (293)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-----
T ss_pred             EEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----
Confidence            999999999999999999999999999999999998654  3467889999999999999999999999999875     


Q ss_pred             CCCeEEEeCCcccc-cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 020927          161 KEGRIVNVSSRRHQ-FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR  239 (319)
Q Consensus       161 ~~~~ii~isS~~~~-~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~  239 (319)
                      +.++||++||..+. .+.|               ++..|++||++++.|+++|+.|++++|  |+||+|+||++.|++..
T Consensus       169 ~~g~iV~isS~~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~  231 (293)
T 3rih_A          169 GRGRVILTSSITGPVTGYP---------------GWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLV  231 (293)
T ss_dssp             SSCEEEEECCSBTTTBBCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHH
T ss_pred             CCCEEEEEeChhhccCCCC---------------CCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchh
Confidence            37899999999885 4433               468999999999999999999999999  99999999999999765


Q ss_pred             Cc--hhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          240 NI--SFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       240 ~~--~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ..  .....+....+..++.+|+|+|+.++||+ ++.+.+++|+.|. |+|...
T Consensus       232 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~-s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          232 DMGEEYISGMARSIPMGMLGSPVDIGHLAAFLA-TDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTTTC
T ss_pred             hccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCccC
Confidence            44  22233444556777889999999999999 6889999999888 555544

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=9.6e-44  Score=316.01  Aligned_cols=241  Identities=27%  Similarity=0.345  Sum_probs=209.3

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..++++||++|||||++|||+++|++|+++|++|++++| +.+..+++.+++...  +.++.++.+|+++++++++++++
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHH
Confidence            447899999999999999999999999999999999988 777777777777665  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++     +.|+||++||..+..+.| 
T Consensus       100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  173 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-----RSGRIINIASVVGEMGNP-  173 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCHHHHHCCT-
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcCCCC-
Confidence            99999999999999998654  3467789999999999999999999999999875     478999999999987654 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                    ++..|++||+++++|++.|+.|++++|  |+||+|+||+++|++...... ..+....+..++.+|
T Consensus       174 --------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~-~~~~~~~p~~r~~~~  236 (269)
T 4dmm_A          174 --------------GQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSELAA-EKLLEVIPLGRYGEA  236 (269)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCHHHH-HHHGGGCTTSSCBCH
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCcccccccH-HHHHhcCCCCCCCCH
Confidence                          368999999999999999999999999  999999999999998765421 333445566778899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|++++||+..+.+.++||+.+. ++|.
T Consensus       237 ~dvA~~v~~l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          237 AEVAGVVRFLAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             HHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence            9999999999954488999999888 5553

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.2e-43  Score=314.52  Aligned_cols=245  Identities=20%  Similarity=0.152  Sum_probs=211.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++..... +.++.++.+|+++++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999998888876532 23799999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.++++++|+||||||+...   ..+.+.++|++.+++|+.+++++++.++|.|.++     +.|+||++||..+..+.|
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  159 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-----GGGSFVGISSIAASNTHR  159 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHSCCT
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEeCHHHcCCCC
Confidence            99999999999999997432   3467789999999999999999999999999874     478999999999987644


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKY  254 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (319)
                                     +...|++||++++.|+++++.+++++|  |+||+|+||++.|++....    .....+....+..
T Consensus       160 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  222 (281)
T 3svt_A          160 ---------------WFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP  222 (281)
T ss_dssp             ---------------TCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSS
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCC
Confidence                           367899999999999999999999999  9999999999999987643    2233444555667


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ++.+|+|+|++++||+ ++.+.+++|+.+. ++|...
T Consensus       223 r~~~~~dva~~~~~l~-s~~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          223 RQGEVEDVANMAMFLL-SDAASFVTGQVINVDGGQML  258 (281)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHh-CcccCCCCCCEEEeCCChhc
Confidence            7889999999999999 6888999999888 455443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3e-43  Score=310.96  Aligned_cols=242  Identities=21%  Similarity=0.231  Sum_probs=211.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +||++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++...  +.++.++.+|++++++++++++++.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999987 89999888888888665  5689999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|+++     +.++||++||..+..+.|      
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~------  149 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-----GGGHIVSISSLGSIRYLE------  149 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEEEEGGGTSBCT------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhCCCCC------
Confidence            999999999997543  3467789999999999999999999999999874     478999999999887544      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHhhhhcCCHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~  260 (319)
                               ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++......    ...+....+..++.+|+
T Consensus       150 ---------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  218 (258)
T 3oid_A          150 ---------NYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK  218 (258)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHH
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHH
Confidence                     478999999999999999999999999  999999999999999876532    23344456677788999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCcccccChh
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQ  294 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~  294 (319)
                      |+|++++||+ ++.+.++||+.+. |+|.....++
T Consensus       219 dva~~v~~L~-s~~~~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          219 DMVDTVEFLV-SSKADMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             HHHHHHHHHT-SSTTTTCCSCEEEESTTGGGBCC-
T ss_pred             HHHHHHHHHh-CcccCCccCCEEEECCCccCCCCC
Confidence            9999999999 6888999999888 6665544433

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-43  Score=316.25  Aligned_cols=249  Identities=25%  Similarity=0.229  Sum_probs=209.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999998888887553  66899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p~~  180 (319)
                      +++++|+||||||+...   ..+.+.++|++.+++|+.|++++++.++|.|.++     +.|+||++||..+. .+.|  
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~--  154 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-----GGGSLTFTSSFVGHTAGFA--  154 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCSBTTTBCCT--
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEcChhhCcCCCC--
Confidence            99999999999997633   3467889999999999999999999999999874     47899999999887 4333  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-c----h-hHHHHHHHHhhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-I----S-FFSGLVGLLGKY  254 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~----~-~~~~~~~~~~~~  254 (319)
                                   +...|++||+++++|+++|+.|+++.|  |+||+|+||++.|++... .    . ....+....+..
T Consensus       155 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  219 (280)
T 3tox_A          155 -------------GVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALK  219 (280)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTS
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccC
Confidence                         468899999999999999999999999  999999999999998654 1    1 122233334566


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccccChhccCH
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNT  298 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~~~~~~~~~  298 (319)
                      ++.+|+|+|++++||+ ++.+.++||+.+..+|.........++
T Consensus       220 r~~~pedvA~~v~~L~-s~~a~~itG~~i~vdGG~~~~~~a~~~  262 (280)
T 3tox_A          220 RIARPEEIAEAALYLA-SDGASFVTGAALLADGGASVTKAAENL  262 (280)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCC-----
T ss_pred             CCcCHHHHHHHHHHHh-CccccCCcCcEEEECCCccccccccch
Confidence            7789999999999999 688899999988854444444444443

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-43  Score=316.23  Aligned_cols=241  Identities=24%  Similarity=0.245  Sum_probs=203.6

Q ss_pred             ccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .....++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|+++++++++++
T Consensus        20 ~sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           20 GSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             -------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHH
Confidence            333446799999999999999999999999999999999999998888777766     567899999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.++     +.|+||++||..+..+.
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~  169 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-----GGGAIVNLSSLAGQVAV  169 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCC
Confidence            9999999999999999998644  3467889999999999999999999999999874     47899999999998764


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch------hHHHHHH--
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS------FFSGLVG--  249 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~--  249 (319)
                      |               +...|++||++++.|+++++.|++++|  |+||+|+||++.|++.....      .......  
T Consensus       170 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  232 (277)
T 3gvc_A          170 G---------------GTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSM  232 (277)
T ss_dssp             T---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTCC------CCHHHH
T ss_pred             C---------------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhh
Confidence            4               468999999999999999999999999  99999999999999754321      0011111  


Q ss_pred             -HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          250 -LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       250 -~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                       ..+..++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       233 ~~~~~~r~~~pedvA~~v~~L~-s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          233 IARLQGRMAAPEEMAGIVVFLL-SDDASMITGTTQIADGGT  272 (277)
T ss_dssp             HHHHHSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             hhccccCCCCHHHHHHHHHHHc-CCccCCccCcEEEECCcc
Confidence             345567789999999999999 6889999999888 5443

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.3e-43  Score=314.67  Aligned_cols=244  Identities=26%  Similarity=0.267  Sum_probs=211.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  103 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQM  103 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888888888665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+....+. 
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~----~~g~iv~isS~~~~~~~~~-  178 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQG----LGGTIITTASMSGHIINIP-  178 (276)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCCS-
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----CCcEEEEECchHhcccCCC-
Confidence            9999999999999998654  33677899999999999999999999999998752    2489999999988764221 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-HHHHHHHHhhhhcCCH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~  259 (319)
                                  .+...|++||++++.|+++++.|++++|  |+||+|+||+++|++...... ...+....+..++.+|
T Consensus       179 ------------~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~p  244 (276)
T 3r1i_A          179 ------------QQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRP  244 (276)
T ss_dssp             ------------SCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCG
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCH
Confidence                        1357899999999999999999999999  999999999999999876532 2333344566778899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       245 edvA~~v~fL~-s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          245 EELTGLYLYLA-SAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             GGSHHHHHHHH-SGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHc-CccccCccCcEEEECcCc
Confidence            99999999999 6889999999888 5554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.1e-43  Score=313.98  Aligned_cols=250  Identities=26%  Similarity=0.289  Sum_probs=206.0

Q ss_pred             CCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           12 FSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        12 ~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      -........+...+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|+++
T Consensus        10 ~~~~~~~~~~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d   84 (277)
T 4dqx_A           10 GVDLGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSS   84 (277)
T ss_dssp             ------------CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTC
T ss_pred             CCCCCccccccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCC
Confidence            34444445555668899999999999999999999999999999999999998888777664     5679999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      +++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.|+++++++++|.|+++     +.|+||++|
T Consensus        85 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~is  159 (277)
T 4dqx_A           85 AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-----GGGSIINTT  159 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-----TCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEC
Confidence            999999999999999999999999998644  3467789999999999999999999999999874     478999999


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhH
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFF  244 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~  244 (319)
                      |..+..+.|               +...|++||+|+++|+++|+.|++++|  |+||+|+||++.|++....     ...
T Consensus       160 S~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~  222 (277)
T 4dqx_A          160 SYTATSAIA---------------DRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFTKIFAEAKDPA  222 (277)
T ss_dssp             CGGGTSCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHHTCSCHH
T ss_pred             chhhCcCCC---------------CChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhhhhcccccchh
Confidence            999987644               368999999999999999999999999  9999999999999983321     111


Q ss_pred             ---HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          245 ---SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       245 ---~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                         ..+....+..++.+|+|+|++++||+ ++.+.+++|+.+. ++|..
T Consensus       223 ~~~~~~~~~~~~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          223 KLRSDFNARAVMDRMGTAEEIAEAMLFLA-SDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             HHHHHHHTTSTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHhcCcccCCcCHHHHHHHHHHHh-CCccCCCcCCEEEECCchh
Confidence               11333345666789999999999999 6888999999888 55543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-43  Score=315.38  Aligned_cols=250  Identities=26%  Similarity=0.297  Sum_probs=196.9

Q ss_pred             CCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           11 GFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        11 ~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      ..+..+....+...|.++||++|||||++|||+++|++|+++|++|+++ .|+.+..+++.+.+...  +.++.++.+|+
T Consensus         9 ~~~~~~~~~~~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl   86 (267)
T 3u5t_A            9 SGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADV   86 (267)
T ss_dssp             ------------------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             cccccccccccccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCC
Confidence            3344444445555577899999999999999999999999999999988 56777777777777655  56899999999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEE
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVN  167 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~  167 (319)
                      +++++++++++++.+.++++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.++|.|++       .|+||+
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~  159 (267)
T 3u5t_A           87 SDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIIN  159 (267)
T ss_dssp             TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEE
Confidence            99999999999999999999999999998644  346678899999999999999999999999965       579999


Q ss_pred             eCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhH
Q 020927          168 VSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFF  244 (319)
Q Consensus       168 isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~  244 (319)
                      +||..+..+.|.               +..|++||+++++|+++|+.|+++.|  |+||+|+||+++|++....   ...
T Consensus       160 isS~~~~~~~~~---------------~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~  222 (267)
T 3u5t_A          160 MSTSQVGLLHPS---------------YGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLEGKSDEVR  222 (267)
T ss_dssp             ECCTHHHHCCTT---------------CHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC-----------CH
T ss_pred             EeChhhccCCCC---------------chHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccccCCHHHH
Confidence            999998876553               67999999999999999999999999  9999999999999987543   222


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+....+..++.+|+|+|++++||+ ++.+.++||+.+. |+|
T Consensus       223 ~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          223 DRFAKLAPLERLGTPQDIAGAVAFLA-GPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHTSSTTCSCBCHHHHHHHHHHHH-STTTTTCCSEEEEESSS
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHh-CccccCccCCEEEeCCC
Confidence            33444456677889999999999999 6899999999888 444

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=7e-43  Score=315.08  Aligned_cols=257  Identities=16%  Similarity=0.152  Sum_probs=205.8

Q ss_pred             CCCCCCCCCCcccccc--cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHH
Q 020927            7 KGASGFSSSSTAEEVT--QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN------------MAACREVKKA   72 (319)
Q Consensus         7 ~~~~~~~~~~~~~~~~--~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~------------~~~~~~~~~~   72 (319)
                      +|+..++..|-+...+  +..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..++
T Consensus         4 ~~~~~~~~~~~~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (299)
T 3t7c_A            4 HHHHHMGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQ   83 (299)
T ss_dssp             ------------------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHH
T ss_pred             cccccccceeccCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHH
Confidence            4444454444333333  4456899999999999999999999999999999999987            7778888777


Q ss_pred             HHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHH
Q 020927           73 IVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLL  149 (319)
Q Consensus        73 ~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~  149 (319)
                      +...  +.++.++.+|++++++++++++++.+.++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++
T Consensus        84 ~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  161 (299)
T 3t7c_A           84 VEAL--GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAI  161 (299)
T ss_dssp             HHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHhc--CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            7665  6689999999999999999999999999999999999998654   3356889999999999999999999999


Q ss_pred             HHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEee
Q 020927          150 ETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVH  229 (319)
Q Consensus       150 ~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~  229 (319)
                      |.|.++    ++.|+||++||.++..+.|               ++..|++||+++++|+++|+.|++++|  |+||+|+
T Consensus       162 ~~~~~~----~~~g~Iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~  220 (299)
T 3t7c_A          162 PHIMAG----KRGGSIVFTSSIGGLRGAE---------------NIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVC  220 (299)
T ss_dssp             HHHHHT----TSCEEEEEECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEE
T ss_pred             HHHHhc----CCCcEEEEECChhhccCCC---------------CcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEe
Confidence            998764    1368999999999987654               368999999999999999999999999  9999999


Q ss_pred             CCcccCCcccCchhH------------HH------HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          230 PGAITTNLFRNISFF------------SG------LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       230 PG~v~t~~~~~~~~~------------~~------~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ||+++|++.......            ..      .....+ .++.+|+|+|++++||+ ++.+.++||+.|. |+|.
T Consensus       221 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          221 PSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLV-SDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             ESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             cCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHh-CcccccCcCCEEeeCCCc
Confidence            999999997643111            11      111122 45679999999999999 6889999999888 5443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4e-43  Score=315.41  Aligned_cols=267  Identities=39%  Similarity=0.518  Sum_probs=213.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+     +.++.++.+|++++++++++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            567899999999999999999999999999999999999998877665544     568999999999999999988865


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                          +++|+||||||+..+....+.++|++.+++|+.+++.+++.++|.|.+         +||++||.++..+.+   +
T Consensus        85 ----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------riv~isS~~~~~~~~---~  148 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD---------RVVTVSSMAHWPGRI---N  148 (291)
T ss_dssp             ----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---------EEEEECCGGGTTCCC---C
T ss_pred             ----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------heeEeechhhccCCC---C
Confidence                689999999999876666788999999999999999999999999853         999999999886433   2


Q ss_pred             CcCCCC-CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCH
Q 020927          183 FDRIND-QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (319)
                      ++++.. ...+.++..|++||++++.|++.|+.+++++|.+|+||+|+||+++|++.+...  ....+..........+|
T Consensus       149 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (291)
T 3rd5_A          149 LEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA  228 (291)
T ss_dssp             SSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHH
T ss_pred             cccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCH
Confidence            333322 245667788999999999999999999998877799999999999999987652  11122222223334469


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCccc------ccChhccCHHHHHHHHHHHHHHHH
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNVA------QASSQAVNTELAQKLWDFSSDLIY  313 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~  313 (319)
                      +++|++++|++. +  .+++|+++. ++|..      ..+....+++.++++|+++++++.
T Consensus       229 ~~~A~~~~~l~~-~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  286 (291)
T 3rd5_A          229 DFGARQTLYAAS-Q--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTK  286 (291)
T ss_dssp             HHHHHHHHHHHH-S--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc-C--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHc
Confidence            999999999995 4  388999998 44433      234677899999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-43  Score=311.71  Aligned_cols=238  Identities=21%  Similarity=0.264  Sum_probs=207.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999999988888765  66899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++++|+||||||+...   ..+.+.++|++.+++|+.+++++++.++|.|.+.      .|+||++||..+..+.|   
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~---  155 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRHSQA---  155 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGCCCT---
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhccCCC---
Confidence            99999999999997532   3467789999999999999999999999999874      58999999999988654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLV  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~  248 (319)
                                  ++..|++||+++++|+++|+.|++++|  |+||+|+||++.|++.....             ....+.
T Consensus       156 ------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T 3ucx_A          156 ------------KYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA  221 (264)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             ------------ccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh
Confidence                        368999999999999999999999999  99999999999999865431             111222


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+..++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       222 ~~~p~~r~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          222 AGSDLKRLPTEDEVASAILFMA-SDLASGITGQALDVNCGE  261 (264)
T ss_dssp             TTSSSSSCCBHHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             ccCCcccCCCHHHHHHHHHHHc-CccccCCCCCEEEECCCc
Confidence            2345566789999999999999 7889999999888 5443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.1e-43  Score=308.88  Aligned_cols=237  Identities=27%  Similarity=0.334  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999998888777766     56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|+++.    ..++||++||..+..+.|    
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~----  148 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG----KAGRVISIASNTFFAGTP----  148 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHHTCT----
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC----CCcEEEEECchhhccCCC----
Confidence            99999999999998654  33678899999999999999999999999998751    368999999999988655    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHH-HhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGL-LGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~-~~~~~~~~~  259 (319)
                                 ++..|++||+++++|+++++.|++++|  |+||+|+||+++|++......  ...+... .+..+..+|
T Consensus       149 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p  215 (247)
T 3rwb_A          149 -----------NMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQP  215 (247)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCH
T ss_pred             -----------CchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCH
Confidence                       368999999999999999999999999  999999999999998765421  1222222 455667899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+.++||+ ++.+.++||+.+. |+|.
T Consensus       216 edva~~v~~L~-s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          216 EHIADVVSFLA-SDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            99999999999 6889999999888 5554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=4e-43  Score=312.34  Aligned_cols=237  Identities=25%  Similarity=0.257  Sum_probs=205.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998887777666     567899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          103 KSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      .++++++|+||||||+...    ..+.+.++|++.+++|+.+++++++.++|+|+++     +.++||++||..+..+.|
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~  154 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-----GGGAIVNISSATAHAAYD  154 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSBCS
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCHHHcCCCC
Confidence            9999999999999998633    2356789999999999999999999999999874     478999999999987544


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYV  255 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (319)
                                     +...|++||+++++|+++++.|++++|  |+||+|+||++.|++....   .....+....+..+
T Consensus       155 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r  217 (271)
T 3tzq_B          155 ---------------MSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR  217 (271)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSS
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCC
Confidence                           468999999999999999999999999  9999999999999987622   22233344456677


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +.+|+|+|+.++||+ ++.+.++||+.+. |+|
T Consensus       218 ~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          218 IGEPHEIAELVCFLA-SDRAAFITGQVIAADSG  249 (271)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHh-CcccCCcCCCEEEECCC
Confidence            789999999999999 6889999999888 555

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=5.1e-43  Score=313.93  Aligned_cols=241  Identities=21%  Similarity=0.191  Sum_probs=205.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC----------------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN----------------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~----------------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+.+...  +.++.++.
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   82 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAE   82 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEE
Confidence            3467899999999999999999999999999999999887                77777777777654  56899999


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCC
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEG  163 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~  163 (319)
                      +|++++++++++++++.++++++|+||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++.    +.|
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g  158 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG----RGG  158 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC----CCc
Confidence            99999999999999999999999999999998654   33567899999999999999999999999998741    368


Q ss_pred             eEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh
Q 020927          164 RIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF  243 (319)
Q Consensus       164 ~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~  243 (319)
                      +||++||..+..+.|               ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++......
T Consensus       159 ~iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~  221 (286)
T 3uve_A          159 SIILTSSVGGLKAYP---------------HTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHNEGT  221 (286)
T ss_dssp             EEEEECCGGGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSSHHH
T ss_pred             EEEEECchhhccCCC---------------CccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccccch
Confidence            999999999988655               368899999999999999999999999  999999999999999764321


Q ss_pred             HHH------------HH------HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          244 FSG------------LV------GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       244 ~~~------------~~------~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...            ..      ..++ .++.+|+|+|++++||+ ++.+.++||+.|. |+|.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~-s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          222 FKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFA-SDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             HHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             hhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHc-CccccCCcCCEEeECCcc
Confidence            110            01      1123 55679999999999999 7899999999888 5443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-43  Score=313.49  Aligned_cols=240  Identities=22%  Similarity=0.229  Sum_probs=204.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-------------CHHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-------------NMAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      ..+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+...  +.++.++.+|++
T Consensus         6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   83 (277)
T 3tsc_A            6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTR   83 (277)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCC
Confidence            45789999999999999999999999999999999998             677788777777655  668999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEe
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNV  168 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~i  168 (319)
                      ++++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++.    +.|+||++
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~i  159 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGG----RGGSIILI  159 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCCEEEEE
Confidence            9999999999999999999999999998755  33678899999999999999999999999998752    36899999


Q ss_pred             CCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH--
Q 020927          169 SSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG--  246 (319)
Q Consensus       169 sS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~--  246 (319)
                      ||..+..+.|               +...|++||+++++|+++|+.|++++|  |+||+|+||+++|++.........  
T Consensus       160 sS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~  222 (277)
T 3tsc_A          160 SSAAGMKMQP---------------FMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSGDMVTAVGQ  222 (277)
T ss_dssp             CCGGGTSCCS---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSHHHHHHHHH
T ss_pred             ccHhhCCCCC---------------CchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccchhhhhhhh
Confidence            9999987654               368899999999999999999999999  999999999999998654210000  


Q ss_pred             -----------HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          247 -----------LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       247 -----------~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                                 +....+ .++.+|+|+|++++||+ ++.+.++||+.|. |+|.
T Consensus       223 ~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          223 AMETNPQLSHVLTPFLP-DWVAEPEDIADTVCWLA-SDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHTCGGGTTTTCCSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             cccccHHHHHHhhhccC-CCCCCHHHHHHHHHHHh-CccccCCcCCEEeeCCCc
Confidence                       000112 24679999999999999 6889999999888 5554

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=5.3e-43  Score=312.49  Aligned_cols=244  Identities=21%  Similarity=0.191  Sum_probs=210.4

Q ss_pred             ccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      +...+..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+++++++++++
T Consensus        18 ~~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           18 HLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             CSBCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHH
Confidence            3344456899999999999999999999999999999999999998888888876543 568999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++     +.++||++||..+..+.
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~  171 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-----HGGVIVNITATLGNRGQ  171 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCSHHHHTC
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhCCCC
Confidence            9999999999999999997544  3457889999999999999999999999998765     37899999999998764


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhHHHHHHHHh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFFSGLVGLLG  252 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~  252 (319)
                      |               +...|++||+++++|+++|+.+++++|  |+||+|+||++.|++....     ..........+
T Consensus       172 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p  234 (277)
T 4fc7_A          172 A---------------LQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP  234 (277)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST
T ss_pred             C---------------CcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchhhhhccCCHHHHHHHhccCC
Confidence            4               368899999999999999999999999  9999999999999853211     22333444566


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..++.+|+|+|++++||+ ++.+.++||+.+..+|
T Consensus       235 ~~r~~~p~dvA~~v~fL~-s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          235 LQRLGNKTEIAHSVLYLA-SPLASYVTGAVLVADG  268 (277)
T ss_dssp             TSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             CCCCcCHHHHHHHHHHHc-CCccCCcCCCEEEECC
Confidence            777889999999999999 6889999999888444

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-43  Score=312.45  Aligned_cols=242  Identities=22%  Similarity=0.259  Sum_probs=205.0

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-------------CHHHHHHHHHHHHhhCCCCceEEEEcC
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-------------NMAACREVKKAIVKEIPNAKVQAMELD   88 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~v~~~~~D   88 (319)
                      ..+.+++||++|||||++|||+++|++|+++|++|++++|             +.+.++++.+.+...  +.++.++.+|
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   85 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLD   85 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcC
Confidence            3456799999999999999999999999999999999998             778888887777655  6689999999


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEE
Q 020927           89 LSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIV  166 (319)
Q Consensus        89 l~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii  166 (319)
                      ++++++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|.++.    ..++||
T Consensus        86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv  161 (280)
T 3pgx_A           86 VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAG----NGGSIV  161 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC----CCCEEE
Confidence            999999999999999999999999999998654  33678899999999999999999999999998751    368999


Q ss_pred             EeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH
Q 020927          167 NVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG  246 (319)
Q Consensus       167 ~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~  246 (319)
                      ++||..+..+.|               +...|++||+++++|+++|+.|++++|  |+||+|+||++.|++.........
T Consensus       162 ~isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~  224 (280)
T 3pgx_A          162 VVSSSAGLKATP---------------GNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEPEAMMEI  224 (280)
T ss_dssp             EECCGGGTSCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCHHHHHHH
T ss_pred             EEcchhhccCCC---------------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccchhhhhhh
Confidence            999999988655               368999999999999999999999999  999999999999998764211111


Q ss_pred             HHH------------HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          247 LVG------------LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       247 ~~~------------~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +..            ..+. ++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          225 FARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLA-GDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHH-SGGGTTCSSCEEEESTTG
T ss_pred             hhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            110            0112 4669999999999999 6889999999888 5554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-42  Score=308.19  Aligned_cols=254  Identities=21%  Similarity=0.192  Sum_probs=209.1

Q ss_pred             CCCCCCcccccccCCCCCCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           11 GFSSSSTAEEVTQGIDGSGLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        11 ~~~~~~~~~~~~~~~~l~~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      .++..+.+..+....+++||++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+
T Consensus         4 ~~~~~~~~~~~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl   82 (266)
T 3o38_A            4 SMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDV   82 (266)
T ss_dssp             --CTTSCCCCCCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCT
T ss_pred             CcccccCccccccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCC
Confidence            3444445555556678999999999997 599999999999999999999999999998888886543 46899999999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEE
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVN  167 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~  167 (319)
                      +++++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.+.    ...++||+
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~~~~iv~  158 (266)
T 3o38_A           83 TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGV----DHGGVIVN  158 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS----SCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc----CCCeEEEE
Confidence            99999999999999999999999999998654  3356789999999999999999999999999864    13679999


Q ss_pred             eCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hH
Q 020927          168 VSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FF  244 (319)
Q Consensus       168 isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~  244 (319)
                      +||..+..+.|               ++..|++||++++.|++.|+.+++++|  |+||+|+||+++|++.....   ..
T Consensus       159 ~sS~~~~~~~~---------------~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~  221 (266)
T 3o38_A          159 NASVLGWRAQH---------------SQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKTSSSELL  221 (266)
T ss_dssp             ECCGGGTCCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------------
T ss_pred             eCCHHHcCCCC---------------CCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhccCcHHHH
Confidence            99999987544               478999999999999999999999999  99999999999999876542   22


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+....+..++.+|+|+|++++|++ ++...+++|+++. ++|
T Consensus       222 ~~~~~~~~~~r~~~~~dva~~i~~l~-s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          222 DRLASDEAFGRAAEPWEVAATIAFLA-SDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             -----CCTTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESSC
T ss_pred             HHHHhcCCcCCCCCHHHHHHHHHHHc-CccccCccCCEEEEcCC
Confidence            23333455667789999999999999 6888999999888 544

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-43  Score=312.32  Aligned_cols=250  Identities=24%  Similarity=0.214  Sum_probs=201.2

Q ss_pred             CCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH
Q 020927           15 SSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLA   93 (319)
Q Consensus        15 ~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   93 (319)
                      .|.-+.+..++++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.... +.++.++.+|+++++
T Consensus        11 ~~~~~~n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~   89 (281)
T 3v2h_A           11 VDLGTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPS   89 (281)
T ss_dssp             -----------CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHH
T ss_pred             ccccccchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHH
Confidence            33344444467899999999999999999999999999999999999 6677777777775542 568999999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           94 SVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        94 ~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||.
T Consensus        90 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~  164 (281)
T 3v2h_A           90 EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-----GWGRIINIASA  164 (281)
T ss_dssp             HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCG
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCc
Confidence            9999999999999999999999998654  3356789999999999999999999999999875     46899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-------
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-------  244 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-------  244 (319)
                      .+..+.|.               ...|++||+++++|++.|+.+++++|  |+||+|+||++.|++.......       
T Consensus       165 ~~~~~~~~---------------~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~  227 (281)
T 3v2h_A          165 HGLVASPF---------------KSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQIPDQARTRGI  227 (281)
T ss_dssp             GGTSCCTT---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC----------------
T ss_pred             ccccCCCC---------------chHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhhcchhhhhcCC
Confidence            99876553               67999999999999999999999999  9999999999999987643110       


Q ss_pred             -------HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          245 -------SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       245 -------~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                             ..+....+..++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       228 ~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~-s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          228 TEEQVINEVMLKGQPTKKFITVEQVASLALYLA-GDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             ------------CCTTCSCBCHHHHHHHHHHHH-SSGGGGCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHc-CCCcCCCCCcEEEECCCc
Confidence                   01222345667789999999999999 6888999999888 5554

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-42  Score=309.64  Aligned_cols=246  Identities=26%  Similarity=0.297  Sum_probs=210.3

Q ss_pred             cccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH
Q 020927           17 TAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASV   95 (319)
Q Consensus        17 ~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   95 (319)
                      ..+.+...++++||++|||||++|||+++|++|+++|++|+++++ +.+..+++.+++...  +.++.++.+|+++++++
T Consensus        19 ~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v   96 (271)
T 3v2g_A           19 YFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAI   96 (271)
T ss_dssp             -CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHH
T ss_pred             chhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            334455567899999999999999999999999999999999865 556677777777665  66899999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++       .++||++||..+
T Consensus        97 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~  169 (271)
T 3v2g_A           97 EQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLA  169 (271)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGG
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhh
Confidence            99999999999999999999998654  346788999999999999999999999999954       679999999877


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLG  252 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~  252 (319)
                      ...              +..++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++.... ..........+
T Consensus       170 ~~~--------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (271)
T 3v2g_A          170 ELV--------------PWPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPADGDHAEAQRERIA  233 (271)
T ss_dssp             TCC--------------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSSCSSHHHHHHTCT
T ss_pred             ccC--------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCcccccchhHHHHHhcCC
Confidence            653              122468999999999999999999999999  9999999999999987654 23344555667


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..++.+|+|+|+.++||+ ++.+.++||+.+. |+|.
T Consensus       234 ~~r~~~pedvA~~v~fL~-s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          234 TGSYGEPQDIAGLVAWLA-GPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             TSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTT
T ss_pred             CCCCCCHHHHHHHHHHHh-CcccCCccCCEEEeCcCc
Confidence            778889999999999999 7899999999888 5553

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.8e-43  Score=308.90  Aligned_cols=240  Identities=20%  Similarity=0.192  Sum_probs=206.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999988888877543  568999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+.    +..++||++||..+..+.|     
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~~~~-----  151 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK----GIKGNIINMVATYAWDAGP-----  151 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TCCCEEEEECCGGGGSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----CCCcEEEEECchhhccCCC-----
Confidence            9999999999997544  3467789999999999999999999999999543    2478999999999987654     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeeCCcccCCcccCc-----hhHHHHHHHHhhhhcC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLK-EDGVDITANSVHPGAITTNLFRNI-----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~  257 (319)
                                ++..|++||+++++|+++|+.|++ +.|  |+||+|+||++.|++....     .....+....+..++.
T Consensus       152 ----------~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~  219 (257)
T 3imf_A          152 ----------GVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLG  219 (257)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCB
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCc
Confidence                      368899999999999999999998 678  9999999999999975432     1223344455667788


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +|+|+|++++||+ ++.+.++||+.+. |+|..
T Consensus       220 ~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          220 TPEEIAGLAYYLC-SDEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHc-CchhcCccCCEEEECCCcc
Confidence            9999999999999 6888999999888 55543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=9.9e-43  Score=309.61  Aligned_cols=239  Identities=21%  Similarity=0.253  Sum_probs=204.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+.+++||++|||||++|||+++|++|+++|++|+++++ +.+..+++.+++...  +.++.++.+|++++++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHH
Confidence            3456799999999999999999999999999999999765 566677777777665  6689999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc-cccCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR-HQFSY  177 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~-~~~~~  177 (319)
                      ++.++++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||.. +..+.
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  161 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKDFSV  161 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTTCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhccCCC
Confidence            999999999999999998644  346688999999999999999999999999964       67999999988 44433


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------------hh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------------SF  243 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------------~~  243 (319)
                      |               +...|++||+++++|+++|+.|++++|  |+||+|+||+++|++....              ..
T Consensus       162 ~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T 3is3_A          162 P---------------KHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQR  224 (270)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHH
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhhhhccccccccchHHH
Confidence            3               468899999999999999999999999  9999999999999986521              11


Q ss_pred             HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          244 FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ...+....+..++.+|+|+|++++||+ ++.+.++||+.+. |+|
T Consensus       225 ~~~~~~~~p~~r~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          225 QQMAAHASPLHRNGWPQDVANVVGFLV-SKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHc-CCccCCccCcEEEeCCC
Confidence            122334456677889999999999999 6899999999888 544

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.6e-42  Score=306.31  Aligned_cols=238  Identities=18%  Similarity=0.241  Sum_probs=206.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888877766     5578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++.    ..|+||++||..+..+.|   
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~---  150 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG----RGGKIINMASQAGRRGEA---  150 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCT---
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCeEEEEECChhhccCCC---
Confidence            999999999999998654  34677899999999999999999999999998741    368999999999987654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLV  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~  248 (319)
                                  +...|++||++++.|++.++.|++++|  |+||+|+||++.|++....             .....+.
T Consensus       151 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T 4e6p_A          151 ------------LVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVG  216 (259)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHh
Confidence                        368899999999999999999999999  9999999999999986543             1112233


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+..++.+|+|+|++++||+ ++.+.+++|+.+. ++|.
T Consensus       217 ~~~p~~r~~~~~dva~~v~~L~-s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          217 EAVPFGRMGTAEDLTGMAIFLA-SAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             HHSTTSSCBCTHHHHHHHHHTT-SGGGTTCCSCEEEESTTS
T ss_pred             ccCCCCCCcCHHHHHHHHHHHh-CCccCCCCCCEEEECcCh
Confidence            4456677889999999999999 6889999999888 4443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-42  Score=311.19  Aligned_cols=243  Identities=25%  Similarity=0.272  Sum_probs=192.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...  +.++.++.+|++++++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999995 777788888877665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC----CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          103 KSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      .++++++|+||||||+..    +..+.+.++|++.+++|+.+++++++.++|.|.++..  ...++||++||..+..+.|
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~~~~  179 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVMTSP  179 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC-------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhccCCC
Confidence            999999999999999832    2345688999999999999999999999999987421  1267999999999987654


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHH-HHhhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVG-LLGKYV  255 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~-~~~~~~  255 (319)
                      .               ...|++||+++++|+++|+.+++++|  |+||+|+||+++|++.....  ....... ..+..+
T Consensus       180 ~---------------~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  242 (280)
T 4da9_A          180 E---------------RLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRR  242 (280)
T ss_dssp             C---------------CHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC----------------------C
T ss_pred             C---------------ccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCC
Confidence            3               67899999999999999999999999  99999999999999876542  1112222 456677


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       243 ~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~  275 (280)
T 4da9_A          243 WGEPEDIGNIVAGLA-GGQFGFATGSVIQADGGL  275 (280)
T ss_dssp             CBCHHHHHHHHHHHH-TSTTGGGTTCEEEESTTC
T ss_pred             cCCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            889999999999999 6889999999888 5554

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.5e-42  Score=304.34  Aligned_cols=237  Identities=25%  Similarity=0.292  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++++++++++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999876 667777777777665  668999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|+++     +.++||++||..+..+.|     
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  149 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-----RSGAIINLSSVVGAVGNP-----  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhcCCCC-----
Confidence            9999999999998654  3467789999999999999999999999999875     478999999999988655     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~  261 (319)
                                +...|++||+++++|+++++.|++++|  |+||+|+||++.|++.....  ....+....+..++.+|+|
T Consensus       150 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~d  217 (246)
T 3osu_A          150 ----------GQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTD  217 (246)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHH
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHH
Confidence                      368999999999999999999999999  99999999999999877652  2233444456677889999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|++++||+ ++...++||+.+. ++|.
T Consensus       218 va~~v~~l~-s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          218 IANTVAFLA-SDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHHHT-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHh-CccccCCCCCEEEeCCCc
Confidence            999999999 6888999999888 5553

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-42  Score=302.63  Aligned_cols=239  Identities=27%  Similarity=0.359  Sum_probs=210.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||++++++|+++|++|++++|+++..++..+.+...  +.++.++.+|++++++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999999998888888765  56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|+   
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  150 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-----RWGRIISIGSVVGSAGNPG---  150 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT---
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCCC---
Confidence            99999999999998754  3356789999999999999999999999999875     4689999999999886553   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~  260 (319)
                                  +..|++||++++.|+++++.+++++|  |+||+|+||++.|++......  ...+....+..++.+|+
T Consensus       151 ------------~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T 3lyl_A          151 ------------QTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPK  216 (247)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHH
T ss_pred             ------------cHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHH
Confidence                        68999999999999999999999999  999999999999999876522  22233345666778999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+++++++ ++...+++|+.+. ++|.
T Consensus       217 dva~~i~~l~-s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          217 DIAAAVAFLA-SEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHh-CCCcCCccCCEEEECCCE
Confidence            9999999999 6888999999888 5554

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=7.5e-43  Score=311.87  Aligned_cols=237  Identities=25%  Similarity=0.262  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.+++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999999999888888765  6689999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHH--HHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLE--TMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~--~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|  .|.++     +.|+||++||..+..+.|    
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-----~~g~iV~isS~~~~~~~~----  170 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-----GWGRIVNIASTGGKQGVM----  170 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-----CCcEEEEECChhhccCCC----
Confidence            999999999998654  34577889999999999999999999999  46654     368999999999987654    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~  249 (319)
                                 +...|++||+++++|+++|+.|+++.|  |+||+|+||++.|++....             .....+..
T Consensus       171 -----------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (279)
T 3sju_A          171 -----------YAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA  237 (279)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh
Confidence                       368899999999999999999999999  9999999999999986542             11222333


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+..++.+|+|+|+.++||+ ++.+.++||+.+. ++|.
T Consensus       238 ~~p~~r~~~pedvA~~v~~L~-s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          238 KIPLGRYSTPEEVAGLVGYLV-TDAAASITAQALNVCGGL  276 (279)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHT-SSGGGGCCSCEEEESTTC
T ss_pred             cCCCCCCCCHHHHHHHHHHHh-CccccCcCCcEEEECCCc
Confidence            456677789999999999999 6889999999888 5554

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=9.4e-43  Score=307.28  Aligned_cols=234  Identities=26%  Similarity=0.292  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888777665     55799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|++       .|+||++||.++..+.|    
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~----  147 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEGGHP----  147 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSSBCT----
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcCCCC----
Confidence            99999999999998654  345688999999999999999999999999865       57999999999988655    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------hHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------FFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~  254 (319)
                                 ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++.....        +........+..
T Consensus       148 -----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~  214 (255)
T 4eso_A          148 -----------GMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK  214 (255)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTS
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCC
Confidence                       378999999999999999999999999  99999999999999865421        111223345667


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ++.+|+|+|++++||+ ++ ++++||+.+. |+|..
T Consensus       215 r~~~pedvA~~v~~L~-s~-~~~itG~~i~vdGG~~  248 (255)
T 4eso_A          215 RNGTADEVARAVLFLA-FE-ATFTTGAKLAVDGGLG  248 (255)
T ss_dssp             SCBCHHHHHHHHHHHH-HT-CTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHc-Cc-CcCccCCEEEECCCcc
Confidence            7789999999999999 56 8899999888 55543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.8e-42  Score=311.96  Aligned_cols=246  Identities=15%  Similarity=0.126  Sum_probs=207.4

Q ss_pred             cccCCCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      +..+++++||++|||||+|  |||+++|++|+++|++|++++|+.+..+...+.....   .++.++.+|++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHH
Confidence            4455778999999999997  9999999999999999999999976544443333332   2468999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           99 ASEFKSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++++.++++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||++||..
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~isS~~  171 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILTLSYYG  171 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGG
T ss_pred             HHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEEEEehh
Confidence            9999999999999999999864      2346778999999999999999999999999864       67999999999


Q ss_pred             cccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHH
Q 020927          173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLV  248 (319)
Q Consensus       173 ~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~  248 (319)
                      +..+.|               ++..|++||+++++|+++|+.|++++|  |+||+|+||++.|++.......    ....
T Consensus       172 ~~~~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~  234 (296)
T 3k31_A          172 AEKVVP---------------HYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGISDFHYILTWNK  234 (296)
T ss_dssp             GTSCCT---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSCHHHHHHHHHHH
T ss_pred             hccCCC---------------CchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhcccchHHHHHHHH
Confidence            987644               368899999999999999999999999  9999999999999998766322    2333


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChh
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQ  294 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~  294 (319)
                      ...+..++.+|+|+|++++||+ ++.+.++||+.|. |+|.......
T Consensus       235 ~~~p~~r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          235 YNSPLRRNTTLDDVGGAALYLL-SDLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             hcCCCCCCCCHHHHHHHHHHHc-CCccCCccCCEEEECCCccccCCc
Confidence            4456677889999999999999 6888999999888 6666554433

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.6e-43  Score=312.04  Aligned_cols=239  Identities=23%  Similarity=0.243  Sum_probs=207.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888888888665  668999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+. +++|+||||||+...  ..+.+.++|+..+++|+.|++.+++.++|.|+++     +.|+||++||..+..+.+  
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~~--  176 (275)
T 4imr_A          105 EAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-----KWGRVVSIGSINQLRPKS--  176 (275)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT--
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCCCC--
Confidence            887 899999999998654  3467889999999999999999999999999875     478999999999887433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhHHHHHHHH-hhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFFSGLVGLL-GKY  254 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~-~~~  254 (319)
                                   +...|++||+++++|++.++.+++++|  |+||+|+||+++|++....     .....+.... +..
T Consensus       177 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  241 (275)
T 4imr_A          177 -------------VVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG  241 (275)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC
T ss_pred             -------------CchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCcccccccccChHHHHHHHhhcCccC
Confidence                         356799999999999999999999999  9999999999999986543     1222333334 566


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ++.+|+|+|++++||+ ++.+.++||+.|. |+|
T Consensus       242 r~~~pedvA~~v~fL~-s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          242 RAGRPEEMVGAALFLA-SEACSFMTGETIFLTGG  274 (275)
T ss_dssp             SCBCGGGGHHHHHHHH-SGGGTTCCSCEEEESSC
T ss_pred             CCcCHHHHHHHHHHHc-CcccCCCCCCEEEeCCC
Confidence            7789999999999999 6889999999888 444

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-42  Score=307.70  Aligned_cols=242  Identities=26%  Similarity=0.283  Sum_probs=204.7

Q ss_pred             ccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .+...++++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...  +.++.++.+|++++++++++.
T Consensus        22 ~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           22 SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             ---CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             hcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHH
Confidence            4556688999999999999999999999999999999999976 4456666666554  668999999999999999995


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.+ ++++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|+++     +.|+||++||..+..+.
T Consensus        99 ~~~-~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~  172 (273)
T 3uf0_A           99 EEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-----GSGRIVTIASMLSFQGG  172 (273)
T ss_dssp             HHH-HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCC
T ss_pred             HHH-HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchHhcCCC
Confidence            554 456899999999998654  3356889999999999999999999999999875     37899999999998764


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~  253 (319)
                      |               +...|++||++++.|+++|+.|++++|  |+||+|+||++.|++....    .....+....+.
T Consensus       173 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  235 (273)
T 3uf0_A          173 R---------------NVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAALRADDERAAEITARIPA  235 (273)
T ss_dssp             S---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT
T ss_pred             C---------------CChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC
Confidence            4               368999999999999999999999999  9999999999999987543    223344455677


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .++.+|+|+|++++||+ ++.+.+++|+.+. |+|.
T Consensus       236 ~r~~~pedva~~v~~L~-s~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          236 GRWATPEDMVGPAVFLA-SDAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             SSCBCGGGGHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCCHHHHHHHHHHHh-CchhcCCcCCEEEECcCc
Confidence            78889999999999999 6888999999888 5553

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-42  Score=307.45  Aligned_cols=241  Identities=24%  Similarity=0.253  Sum_probs=203.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN------------MAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   81 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVK   81 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            3467899999999999999999999999999999999997            66677776666554  568999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEe
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNV  168 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~i  168 (319)
                      ++++++++++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.++     +.|+||++
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~i  156 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-----NYGRIVTV  156 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEE
Confidence            9999999999999999999999999998654  3467789999999999999999999999999875     37899999


Q ss_pred             CCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-----
Q 020927          169 SSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-----  243 (319)
Q Consensus       169 sS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-----  243 (319)
                      ||..+..+.|               +...|++||+++++|+++|+.|++++|  |+||+|+||++.|++......     
T Consensus       157 sS~~~~~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~  219 (281)
T 3s55_A          157 SSMLGHSANF---------------AQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHNDFVFGTMR  219 (281)
T ss_dssp             CCGGGGSCCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSSHHHHHC--
T ss_pred             CChhhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccchhhhcccc
Confidence            9999987644               368999999999999999999999999  999999999999998764210     


Q ss_pred             -------HHHHHH---H--HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          244 -------FSGLVG---L--LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       244 -------~~~~~~---~--~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                             ......   .  ....++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          220 PDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLV-DEASSHITGTVLPIDAGA  276 (281)
T ss_dssp             -----CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             ccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHc-CCcccCCCCCEEEECCCc
Confidence                   000010   1  11145679999999999999 6888999999888 5553

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.9e-43  Score=312.91  Aligned_cols=245  Identities=17%  Similarity=0.194  Sum_probs=198.7

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR---NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r---~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ...++++||++|||||++|||+++|++|+++|++|++++|   +.+.++++.+++...  +.++.++.+|++++++++++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH
Confidence            3457899999999999999999999999999999999876   455677777777655  66899999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+       .++||++||..+..+
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~  154 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-------NGHIITIATSLLAAY  154 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-------EEEEEEECCCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-------CCEEEEEechhhccC
Confidence            99999999999999999998654  336778999999999999999999999999943       679999999998875


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGK  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~  253 (319)
                      .|               ++..|++||+|+++|+++|+.+++++|  |+||+|+||+++|++.....   ....+....+.
T Consensus       155 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (262)
T 3ksu_A          155 TG---------------FYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMG  217 (262)
T ss_dssp             HC---------------CCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTCC------------CC
T ss_pred             CC---------------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCchHHHHHHHhcCcc
Confidence            44               367899999999999999999999999  99999999999999865431   12223334566


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChh
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQ  294 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~  294 (319)
                      .++.+|+|+|++++||+ ++ +.++||+.+. |+|......+
T Consensus       218 ~r~~~pedvA~~v~~L~-s~-~~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          218 NQLTKIEDIAPIIKFLT-TD-GWWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             CCSCCGGGTHHHHHHHH-TT-TTTCCSCEEEESTTCCCC---
T ss_pred             cCCCCHHHHHHHHHHHc-CC-CCCccCCEEEECCCccCCCcc
Confidence            67789999999999999 57 8899999888 6665544443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=5.7e-43  Score=311.91  Aligned_cols=257  Identities=17%  Similarity=0.164  Sum_probs=216.0

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+  ++.++.+|++++++++++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999876 4555556655432  37889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          104 SSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.++++|+||||||+...      ..+.+.++|+..+++|+.+++.+++.++|.|++       .++||++||..+..+.
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcCCC
Confidence            999999999999998642      336778899999999999999999999999864       4799999999888754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~  253 (319)
                      |               ++..|++||++++.|++.++.+++++|  |+||+|+||+++|++.......    ..+....+.
T Consensus       153 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~  215 (275)
T 2pd4_A          153 A---------------HYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPL  215 (275)
T ss_dssp             T---------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT
T ss_pred             C---------------CchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhccccHHHHHHHHhcCCc
Confidence            4               367899999999999999999999999  9999999999999987654211    222233455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc--cChhccCHHHHHHHHHHHHH
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ--ASSQAVNTELAQKLWDFSSD  310 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~--~~~~~~~~~~~~~~~~~~~~  310 (319)
                      .++.+|+|+|+.++|++ ++...+++|+++. ++|...  .++...+.+.++++|+++++
T Consensus       216 ~~~~~p~dva~~~~~l~-s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMYLL-SSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             SSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             CCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            66789999999999999 6888899999887 666543  45666888999999998763

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.5e-42  Score=306.73  Aligned_cols=250  Identities=17%  Similarity=0.146  Sum_probs=187.0

Q ss_pred             cCCCCCCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEE
Q 020927            6 SKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +++++.-++-+..+....+|+++||++|||||++|||+++|++|+++|++|++++|+.+...+....   .    .+.++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~   76 (260)
T 3gem_A            4 SHHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A----GAVAL   76 (260)
T ss_dssp             -----------------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H----TCEEE
T ss_pred             CcCCccccccccCcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c----CCeEE
Confidence            3445555566666666677999999999999999999999999999999999999998765433332   2    37889


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCe
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGR  164 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~  164 (319)
                      .+|++++++++++++++.+.++++|+||||||+... ..+.+.++|++.+++|+.+++++++.++|+|.++     +.++
T Consensus        77 ~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~  151 (260)
T 3gem_A           77 YGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-----EVAD  151 (260)
T ss_dssp             ECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCE
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcE
Confidence            999999999999999999999999999999998654 3345678899999999999999999999999874     3689


Q ss_pred             EEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH
Q 020927          165 IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF  244 (319)
Q Consensus       165 ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~  244 (319)
                      ||++||..+..+.|               +...|++||+++++|+++|+.++++ +  |+||+|+||++.|++.......
T Consensus       152 iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~~~~~  213 (260)
T 3gem_A          152 IVHISDDVTRKGSS---------------KHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDDAAYR  213 (260)
T ss_dssp             EEEECCGGGGTCCS---------------SCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC---------
T ss_pred             EEEECChhhcCCCC---------------CcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCCHHHH
Confidence            99999999987644               4689999999999999999999988 7  9999999999999976544444


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+....+..++.+|+|+|++++||+   ...+++|+.+. ++|.
T Consensus       214 ~~~~~~~p~~r~~~~edva~~v~~L~---~~~~itG~~i~vdGG~  255 (260)
T 3gem_A          214 ANALAKSALGIEPGAEVIYQSLRYLL---DSTYVTGTTLTVNGGR  255 (260)
T ss_dssp             ------CCSCCCCCTHHHHHHHHHHH---HCSSCCSCEEEESTTT
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHh---hCCCCCCCEEEECCCc
Confidence            55555667777889999999999998   36789999888 5554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.8e-42  Score=308.13  Aligned_cols=255  Identities=16%  Similarity=0.183  Sum_probs=202.9

Q ss_pred             CCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+  ++.++.+|++++++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            3889999999999  99999999999999999999999875 4445555555432  37889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          104 SSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.++++|+||||||+...      ..+.+.++|++.+++|+.+++.+++.++|.|.+.      .++||++||..+..+.
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~  168 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR------NGAIVTLSYYGAEKVV  168 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS------CCEEEEEECGGGTSBC
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCEEEEEccchhccCC
Confidence            999999999999998642      3356778999999999999999999999999652      5899999999888754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~  253 (319)
                      |               ++..|++||++++.|++.++.+++++|  |+||+|+||++.|++.......    ..+....+.
T Consensus       169 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~  231 (285)
T 2p91_A          169 P---------------HYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF  231 (285)
T ss_dssp             T---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT
T ss_pred             C---------------CccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC
Confidence            4               367899999999999999999999999  9999999999999987654211    222233455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChhccCHHHHHHHHHH
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQAVNTELAQKLWDF  307 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~~~~~~~~~~~~~~  307 (319)
                      .++.+|+|+|+++++++ ++...+++|+.+. ++|.........+++.++++|+.
T Consensus       232 ~~~~~~~dva~~~~~l~-s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          232 GKPITIEDVGDTAVFLC-SDWARAITGEVVHVDNGYHIMGVFGREEEIKKEVYGD  285 (285)
T ss_dssp             SSCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGGGBSCC-------------
T ss_pred             CCCcCHHHHHHHHHHHc-CCcccCCCCCEEEECCCcccccccCChHHHHHHhcCC
Confidence            56789999999999999 6888899999776 77777777888899999999974

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.4e-42  Score=304.73  Aligned_cols=243  Identities=20%  Similarity=0.176  Sum_probs=202.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN------------MAACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|++
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~   84 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVR   84 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTT
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCC
Confidence            3467899999999999999999999999999999999987            77777777777665  668999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                      ++++++++++++.++++++|+||||||+.....  +.++|++.+++|+.++++++++++|+|.++.    ..++||++||
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS  158 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQG----TGGSIVLISS  158 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEEcc
Confidence            999999999999999999999999999864432  5789999999999999999999999998741    3689999999


Q ss_pred             cccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH
Q 020927          171 RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL  250 (319)
Q Consensus       171 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~  250 (319)
                      ..+..+...           ...+...|++||+++++|+++|+.|++++|  |+||+|+||++.|++.........+...
T Consensus       159 ~~~~~~~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~  225 (278)
T 3sx2_A          159 SAGLAGVGS-----------ADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINNEFTREWLAKM  225 (278)
T ss_dssp             GGGTSCCCC-----------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHHHHHHHHH
T ss_pred             HHhcCCCcc-----------CCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchhhhHHHHHhhc
Confidence            998865311           113467899999999999999999999999  9999999999999997653211111110


Q ss_pred             -------------HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          251 -------------LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       251 -------------~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                                   .+ .++.+|+|+|++++||+ ++...++||+.+. |+|.
T Consensus       226 ~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          226 AAATDTPGAMGNAMP-VEVLAPEDVANAVAWLV-SDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTT
T ss_pred             cchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHh-CcccccccCCEEeECCCc
Confidence                         12 35568999999999999 6888999999888 5554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-42  Score=305.68  Aligned_cols=239  Identities=23%  Similarity=0.304  Sum_probs=204.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....++..+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            457889999999999999999999999999999999999999999999999888777789999999999999887765  


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                        +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.|  
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  152 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-----KEGRVIFIASEAAIMPSQ--  152 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TEEEEEEECCGGGTSCCT--
T ss_pred             --hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEEcchhhccCCC--
Confidence              47899999999998654  3366788999999999999999999999999874     468999999999987644  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGL  247 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~  247 (319)
                                   ++..|++||+++++|+++++.++++.|  |+||+|+||++.|++.....             ....+
T Consensus       153 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (267)
T 3t4x_A          153 -------------EMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRF  217 (267)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHH
T ss_pred             -------------cchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHH
Confidence                         368999999999999999999999999  99999999999998754320             01111


Q ss_pred             HHH----HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          248 VGL----LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       248 ~~~----~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...    .+..++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       218 ~~~~~~~~~~~r~~~pedvA~~v~fL~-s~~~~~itG~~i~vdGG~  262 (267)
T 3t4x_A          218 MKENRPTSIIQRLIRPEEIAHLVTFLS-SPLSSAINGSALRIDGGL  262 (267)
T ss_dssp             HHHHCTTCSSCSCBCTHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             hhccCCcccccCccCHHHHHHHHHHHc-CccccCccCCeEEECCCc
Confidence            111    12356789999999999999 6899999999888 5554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.3e-41  Score=305.91  Aligned_cols=240  Identities=15%  Similarity=0.120  Sum_probs=199.6

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+++..+ ..+++....  .++.++.+|++++++++++++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEEL--GAFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhc--CCceEEECCCCCHHHHHHHHHHH
Confidence            46899999999999  55999999999999999999999965433 334444442  36889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .++++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|++       .|+||++||..+..+
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~  176 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEKV  176 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTSB
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhccC
Confidence            999999999999999864      2346778999999999999999999999999964       679999999999876


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~  252 (319)
                      .|               ++..|++||+|+++|+++|+.+++++|  |+||+|+||+++|++......    ...+....+
T Consensus       177 ~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p  239 (293)
T 3grk_A          177 MP---------------NYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP  239 (293)
T ss_dssp             CT---------------TTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------CCHHHHHHHHHHHST
T ss_pred             CC---------------chHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhcccchHHHHHHHHhcCC
Confidence            44               368999999999999999999999999  999999999999998765522    233444566


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      ..++.+|+|+|++++||+ ++.+.++||+.|. |+|.....
T Consensus       240 ~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          240 LRRTVTIDEVGDVGLYFL-SDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             TSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCCCCHHHHHHHHHHHc-CccccCCcceEEEECCCcccCC
Confidence            777889999999999999 6888999999888 66655443

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-41  Score=301.44  Aligned_cols=241  Identities=25%  Similarity=0.256  Sum_probs=202.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||++|||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999888887777654  557899999999999999999999


Q ss_pred             HhcC-CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSG-LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~-~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+.+ +++|+||||||+...  ..+.+.++|+..+++|+.+++.++++++|.|+++     +.++||++||..+..+.| 
T Consensus        93 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~-  166 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFSALP-  166 (273)
T ss_dssp             HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTSCCT-
T ss_pred             HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcCHhhcCCCC-
Confidence            9998 899999999998643  3456778999999999999999999999999764     368999999999987544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------hHHHHHHHH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------FFSGLVGLL  251 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~  251 (319)
                                    +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++.....        ....+....
T Consensus       167 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  230 (273)
T 1ae1_A          167 --------------SVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT  230 (273)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHS
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC
Confidence                          367899999999999999999999999  99999999999999865421        122233344


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +..++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       231 p~~r~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          231 PMGRAGKPQEVSALIAFLC-FPAASYITGQIIWADGGF  267 (273)
T ss_dssp             TTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCCcCHHHHHHHHHHHh-CccccCcCCCEEEECCCc
Confidence            5566789999999999999 6888999999888 5553

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.9e-43  Score=312.86  Aligned_cols=241  Identities=24%  Similarity=0.283  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++....++.++.++.+|+++++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            457999999999999999999999999998   99999999999999999998887778999999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.++++++|+||||||+...   ..+.+.++|++.+++|+.|++.++++++|.|+++     +.|+||++||..+..+.|
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~  183 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-----NSGDIVNLGSIAGRDAYP  183 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEECChhhcCCCC
Confidence            99999999999999998642   3456789999999999999999999999999875     478999999999987654


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhc
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVI  256 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  256 (319)
                                     +...|++||+++++|+++|+.|+++.|  |+||+|+||+++|++....  ...............
T Consensus       184 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p  246 (287)
T 3rku_A          184 ---------------TGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP  246 (287)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC
Confidence                           368899999999999999999999999  9999999999999985321  111222222233333


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+|+|+|++++|++ ++...+++|+.+. +.|.
T Consensus       247 ~~pedvA~~v~~l~-s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          247 LMADDVADLIVYAT-SRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             EEHHHHHHHHHHHH-TSCTTEEEEEEEEEETTE
T ss_pred             CCHHHHHHHHHHHh-CCCCCeEecceEEeeCCC
Confidence            48999999999999 6888899999777 4443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6e-42  Score=303.98  Aligned_cols=242  Identities=21%  Similarity=0.222  Sum_probs=206.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++....++.++.++.+|++++++++++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999988888888876655668999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.| 
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  160 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIRGIG-  160 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSBCS-
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEEcchhhccCCC-
Confidence            9999999999999998643   3356778999999999999999999999999875     368999999999887544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------hhHH----HHHH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------SFFS----GLVG  249 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------~~~~----~~~~  249 (319)
                                    +...|++||++++.|++.++.++++.|  |+||+|+||++.|++....      ....    .+..
T Consensus       161 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  224 (267)
T 1iy8_A          161 --------------NQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ  224 (267)
T ss_dssp             --------------SBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhc
Confidence                          367899999999999999999999999  9999999999999985432      1111    2222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       225 ~~p~~r~~~~~dvA~~v~~l~-s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          225 VNPSKRYGEAPEIAAVVAFLL-SDDASYVNATVVPIDGG  262 (267)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHc-CccccCCCCCEEEECCC
Confidence            234556789999999999999 6888899999888 544

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=6.1e-42  Score=301.53  Aligned_cols=234  Identities=17%  Similarity=0.137  Sum_probs=186.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAAD   79 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999988888776  6689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +. +++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||.++..+.|   
T Consensus        80 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  150 (252)
T 3h7a_A           80 AH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-----GQGKIFFTGATASLRGGS---  150 (252)
T ss_dssp             HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTCCCT---
T ss_pred             hh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHHcCCCC---
Confidence            88 999999999998654  3367789999999999999999999999999875     368999999999988654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEE-EEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITA-NSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v-~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                  ++..|++||+++++|+++|+.++++.|  |+| |+|+||+++|++.....  .........+.. +.+
T Consensus       151 ------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~  215 (252)
T 3h7a_A          151 ------------GFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMP  215 (252)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------------------------CC
T ss_pred             ------------CCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCC
Confidence                        368999999999999999999999999  999 99999999999987641  112222333444 789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      |+|+|++++|++. +.....+|+...
T Consensus       216 pedvA~~~~~l~s-~~~~~~~~~i~~  240 (252)
T 3h7a_A          216 PAAVAGAYWQLYQ-QPKSAWTFEMEI  240 (252)
T ss_dssp             HHHHHHHHHHHHH-CCGGGBCSEEEE
T ss_pred             HHHHHHHHHHHHh-CchhcceeeEEe
Confidence            9999999999994 555666777544

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3.1e-42  Score=304.63  Aligned_cols=241  Identities=23%  Similarity=0.215  Sum_probs=194.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +++++||++|||||++|||+++|++|+++|++|+++ .|+.+..+...+++...  +.++.++.+|++++++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999998 66777777777777654  567899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-cCCC
Q 020927          103 KSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYP  178 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~~~p  178 (319)
                      .++++++|+||||||+...   ..+.+.++|++.+++|+.++++++++++|.|++       .|+||++||..+. .+.|
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  153 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDGGGP  153 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHCCST
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccCCCC
Confidence            9999999999999997632   346778999999999999999999999999965       5799999999988 4433


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYV  255 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~  255 (319)
                                     +...|++||+++++|+++++.|+++ +  |+||+|+||+++|++.....   ....+....+..+
T Consensus       154 ---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  215 (259)
T 3edm_A          154 ---------------GALAYATSKGAVMTFTRGLAKEVGP-K--IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKR  215 (259)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCBCC----------------------C
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCC
Confidence                           4678999999999999999999976 3  99999999999999876542   2233444566777


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      +.+|+|+|+.++||+ ++.+.++||+.+. |+|.....
T Consensus       216 ~~~pedva~~v~~L~-s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          216 EGSSEDVAGLVAFLA-SDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESBCSSBC-
T ss_pred             CcCHHHHHHHHHHHc-CccccCccCCEEEECCCcCCCC
Confidence            889999999999999 6889999999988 55544443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-42  Score=302.68  Aligned_cols=238  Identities=22%  Similarity=0.234  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888887777654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccC-CC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIM-AT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .++++|+||||||+. ..  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|   
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  152 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVKGPP---  152 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHSCCT---
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCC---
Confidence            999999999999976 22  3456788999999999999999999999999864     368999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------h-----h
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------S-----F  243 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~-----~  243 (319)
                                  +...|++||++++.|++.++.++++.|  |+||+|+||++.|++....             .     .
T Consensus       153 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (262)
T 1zem_A          153 ------------NMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVV  218 (262)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhhhccchhhhccccccccCHHHH
Confidence                        367899999999999999999999999  9999999999999986431             1     1


Q ss_pred             HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          244 FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ...+....+..++.+|+|+|+.++||+ ++.+.++||+.+..+|
T Consensus       219 ~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          219 AQQMIGSVPMRRYGDINEIPGVVAFLL-GDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             HHHHHHTSTTSSCBCGGGSHHHHHHHH-SGGGTTCCSCEEEESC
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHc-CchhcCcCCcEEecCC
Confidence            122223345567789999999999999 6888999999887443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=301.50  Aligned_cols=245  Identities=23%  Similarity=0.296  Sum_probs=204.1

Q ss_pred             cccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           19 EEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        19 ~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ++..+..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++++++++
T Consensus        11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHH
Confidence            34445577899999999999999999999999999999999999988888777773322 45788999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc-ccc
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR-HQF  175 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~-~~~  175 (319)
                      ++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||.. +..
T Consensus        90 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~  164 (267)
T 1vl8_A           90 LEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEV  164 (267)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcchhcc
Confidence            99999999999999999998643  3356778999999999999999999999999764     368999999988 765


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLL  251 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~  251 (319)
                      +.|               +...|++||++++.|++.++.++++.|  |+||+|+||+++|++.....    ....+....
T Consensus       165 ~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  227 (267)
T 1vl8_A          165 TMP---------------NISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI  227 (267)
T ss_dssp             CSS---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC
T ss_pred             CCC---------------CChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccccccChHHHHHHHhhC
Confidence            433               367899999999999999999999999  99999999999999865431    112222334


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       228 p~~~~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          228 PLGRTGVPEDLKGVAVFLA-SEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             TTSSCBCGGGGHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHc-CccccCCcCCeEEECCC
Confidence            5566789999999999999 6788899999887 555

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.7e-41  Score=302.68  Aligned_cols=248  Identities=26%  Similarity=0.273  Sum_probs=205.7

Q ss_pred             ccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHH
Q 020927           18 AEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        18 ~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      ...+...+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  + ++.++.+|+++++++++
T Consensus        18 ~~~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~   94 (276)
T 2b4q_A           18 GSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARR   94 (276)
T ss_dssp             ---CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHH
T ss_pred             ccccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHH
Confidence            34444567899999999999999999999999999999999999998888777776432  3 78899999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927           98 FASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++.. ....++||++||..+..
T Consensus        95 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-~~~~g~iV~isS~~~~~  173 (276)
T 2b4q_A           95 LAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS-AENPARVINIGSVAGIS  173 (276)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-SSSCEEEEEECCGGGTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-CCCCCEEEEECCHHHcC
Confidence            999999999999999999998654  345678899999999999999999999999986521 01128999999999887


Q ss_pred             CCCCCCcCcCCCCCCCCCccc-cchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHH--H
Q 020927          176 SYPEGIRFDRINDQSGYNRFS-AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVG--L  250 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~--~  250 (319)
                      +.|.               .. .|++||++++.|++.++.|+++.|  |+||+|+||++.|++.....  ....+..  .
T Consensus       174 ~~~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  236 (276)
T 2b4q_A          174 AMGE---------------QAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRHIANDPQALEADSAS  236 (276)
T ss_dssp             CCCC---------------SCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHHHHHCHHHHHHHHHT
T ss_pred             CCCC---------------CccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhhcchhHHHHHHhhcC
Confidence            5443               45 899999999999999999999999  99999999999999865421  1122222  3


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       237 ~p~~r~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          237 IPMGRWGRPEEMAALAISLA-GTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             STTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             CCCCCcCCHHHHHHHHHHHh-CccccCCCCCEEEeCCC
Confidence            45566789999999999999 6778899999888 444

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.4e-41  Score=301.72  Aligned_cols=258  Identities=21%  Similarity=0.224  Sum_probs=205.6

Q ss_pred             cCCCCCCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCCceEE
Q 020927            6 SKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQA   84 (319)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~v~~   84 (319)
                      +|++.+.+..+..+.+....++++|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++...  +.++.+
T Consensus         3 ~~~~~~~~~~~~~~n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~   80 (267)
T 4iiu_A            3 HHHHHSSGVDLGTENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRL   80 (267)
T ss_dssp             ----------------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEE
T ss_pred             cccccccccccCChhhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEE
Confidence            45556666666677777777899999999999999999999999999999866 567888888888888766  567999


Q ss_pred             EEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCC
Q 020927           85 MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKE  162 (319)
Q Consensus        85 ~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~  162 (319)
                      +.+|++++++++++++++.++++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.+++.|.+.    ...
T Consensus        81 ~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~----~~~  156 (267)
T 4iiu_A           81 LSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA----RQG  156 (267)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSC
T ss_pred             EEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc----CCC
Confidence            9999999999999999999999999999999998654  2356789999999999999999999999988632    247


Q ss_pred             CeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch
Q 020927          163 GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS  242 (319)
Q Consensus       163 ~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~  242 (319)
                      ++||++||..+..+.|               ++..|++||+|++.|++.++.++++.|  |+||+|+||+++|++.....
T Consensus       157 g~iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  219 (267)
T 4iiu_A          157 GRIITLSSVSGVMGNR---------------GQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEMEE  219 (267)
T ss_dssp             EEEEEECCHHHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCCH
T ss_pred             cEEEEEcchHhccCCC---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCcccccH
Confidence            8999999999988654               368999999999999999999999999  99999999999999987652


Q ss_pred             -hHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          243 -FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       243 -~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                       .........+..++.+|+|+|+.++||+ ++...+++|+.+. ++|
T Consensus       220 ~~~~~~~~~~p~~~~~~~edva~~~~~L~-s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          220 SALKEAMSMIPMKRMGQAEEVAGLASYLM-SDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHHHHHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CCcccCccCCEEEeCCC
Confidence             2334445556677789999999999999 6888999999888 544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.2e-41  Score=300.90  Aligned_cols=242  Identities=24%  Similarity=0.275  Sum_probs=196.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +.++.++.+|++++++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999888877765     5679999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.++.. ....++||++||..+..+.|. 
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~-  156 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA-KGQECVILNVASTGAGRPRPN-  156 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTTTTSCCTT-
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCeEEEEeCchhhcCCCCC-
Confidence            999999999999998653   234577899999999999999999999999987531 123678999999998876543 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------hhHHHHHHHHhhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------SFFSGLVGLLGKY  254 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~  254 (319)
                                    +..|++||+++++|+++|+.|++++|  |+||+|+||+++|++....      .....+....+..
T Consensus       157 --------------~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 3n74_A          157 --------------LAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMG  220 (261)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------------------------CTTS
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcC
Confidence                          67899999999999999999999999  9999999999999987644      1122333445666


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ++.+|+|+|++++||+ ++...+++|+.|. ++|..
T Consensus       221 ~~~~~~dva~~~~~l~-s~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          221 RLLKPDDLAEAAAFLC-SPQASMITGVALDVDGGRS  255 (261)
T ss_dssp             SCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHc-CCcccCcCCcEEEecCCcc
Confidence            7789999999999999 6889999999988 55543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.7e-42  Score=307.49  Aligned_cols=236  Identities=21%  Similarity=0.253  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-------CREVKKAIVKEIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+.+...  +.++.++.+|+++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            67899999999999999999999999999999999998653       55566666555  6789999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927           98 FASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +++++.++++++|+||||||+...  ..+.+.++|++++++|+.+++.+++.++|+|+++     +.++||++||..+..
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~  154 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-----PNPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-----SSCEEEECCCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-----CCceEEEECChHhcC
Confidence            999999999999999999998654  3457789999999999999999999999999874     478999999988776


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccCchhHHHHHHHHhhh
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNLFRNISFFSGLVGLLGKY  254 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~  254 (319)
                      +.+             ..++..|++||+++++|+++++.|++++|  |+||+|+|| +++|++.....       ..+..
T Consensus       155 ~~~-------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~~~-------~~~~~  212 (274)
T 3e03_A          155 PAW-------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINMLP-------GVDAA  212 (274)
T ss_dssp             HHH-------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC--------------CCCGG
T ss_pred             CCC-------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhhcc-------ccccc
Confidence            310             12367899999999999999999999999  999999999 69999864321       12233


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCcccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~~  290 (319)
                      ++.+|+|+|+.++||+ ++.+.++||+++.++|...
T Consensus       213 ~~~~pedvA~~v~~l~-s~~~~~itG~~i~~~g~~~  247 (274)
T 3e03_A          213 ACRRPEIMADAAHAVL-TREAAGFHGQFLIDDEVLA  247 (274)
T ss_dssp             GSBCTHHHHHHHHHHH-TSCCTTCCSCEEEHHHHHH
T ss_pred             ccCCHHHHHHHHHHHh-CccccccCCeEEEcCcchh
Confidence            4679999999999999 6889999999998777544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-41  Score=296.71  Aligned_cols=237  Identities=27%  Similarity=0.323  Sum_probs=204.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++||++|||||++|||++++++|+++|++|++++| +++.++++.+++...  +.++.++.+|++++++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999 888888877777654  55789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  149 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-----RHGRIVNIASVVGVTGNP----  149 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCHHhcCCCC----
Confidence            99999999999998644  3356788999999999999999999999999864     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (319)
                                 +...|++||++++.|++.++.|+++.|  |+||+|+||+++|++.....  ....+....+..++.+|+
T Consensus       150 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~  216 (246)
T 2uvd_A          150 -----------GQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQ  216 (246)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHH
Confidence                       367899999999999999999999999  99999999999999876542  222333344556678999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      |+|+.+++++ ++...+++|+.+. ++|
T Consensus       217 dvA~~~~~l~-s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          217 DIANAVTFFA-SDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHc-CchhcCCCCCEEEECcC
Confidence            9999999999 6888999999887 544

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.2e-42  Score=304.12  Aligned_cols=240  Identities=25%  Similarity=0.208  Sum_probs=188.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++     +.++.++.+|++++++++++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999988877766655     4578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCCc------ccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCcccccC
Q 020927          104 SSGLPLNILINNAGIMATPF------MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~~~~  176 (319)
                      ++++++|+||||||+.....      +.+.++|++.+++|+.+++.++++++|.|+++... .++.|+||++||..+..+
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG  156 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence            99999999999999865421      45678999999999999999999999999864211 124689999999999886


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhh-
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGK-  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~-  253 (319)
                      .|               ++..|++||+++++|+++++.|++++|  |+||+|+||++.|++.....  ....+....+. 
T Consensus       157 ~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~  219 (257)
T 3tpc_A          157 QI---------------GQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFP  219 (257)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC--------------CCSSSS
T ss_pred             CC---------------CCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCC
Confidence            54               368999999999999999999999999  99999999999999876542  11222223344 


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .++.+|+|+|+.++||+. +  .+++|+.+. |+|.
T Consensus       220 ~r~~~~~dva~~v~~l~s-~--~~itG~~i~vdGG~  252 (257)
T 3tpc_A          220 PRLGRAEEYAALVKHICE-N--TMLNGEVIRLDGAL  252 (257)
T ss_dssp             CSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHcc-c--CCcCCcEEEECCCc
Confidence            667899999999999994 3  789999888 5554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.7e-42  Score=303.43  Aligned_cols=240  Identities=21%  Similarity=0.266  Sum_probs=200.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....++ .++.++.+|++++++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999988877544 689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++++|+||||||+... ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.|+||++||..+..+.+    
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  153 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-----KNGYIFNVASRAAKYGFA----  153 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECC-------C----
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEEccHHhcCCCC----
Confidence            999999999999998644 2356778999999999999999999999999875     378999999999887432    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 +...|++||+++++|+++|+.++++.|  |+||+|+||+++|++.....      ...+..++.+|+|+
T Consensus       154 -----------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~p~dv  214 (250)
T 3nyw_A          154 -----------DGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKKAG------TPFKDEEMIQPDDL  214 (250)
T ss_dssp             -----------CTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHTT------CCSCGGGSBCHHHH
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhhcC------CCcccccCCCHHHH
Confidence                       367899999999999999999999999  99999999999999765331      12344557899999


Q ss_pred             HHHHHHHhcCCCccCCCcccccCCcccccC
Q 020927          263 AATTCYVALHPHVKGLTGSYFADSNVAQAS  292 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~~~g~~~~~  292 (319)
                      |+.++|++..+....++|..+..+|.....
T Consensus       215 a~~v~~l~s~~~~~~~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          215 LNTIRCLLNLSENVCIKDIVFEMKKSIIEG  244 (250)
T ss_dssp             HHHHHHHHTSCTTEECCEEEEEEHHHHHC-
T ss_pred             HHHHHHHHcCCCceEeeEEEEEeecccccc
Confidence            999999996666777788777755544433

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.7e-41  Score=298.60  Aligned_cols=241  Identities=27%  Similarity=0.275  Sum_probs=206.0

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++||++|||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTV   80 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999888887777654  567899999999999999999999


Q ss_pred             HhcC-CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSG-LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~-~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+.+ +++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|+++     +.++||++||..+..+.| 
T Consensus        81 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  154 (260)
T 2ae2_A           81 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGALAVP-  154 (260)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTSCCT-
T ss_pred             HHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhccCCC-
Confidence            9998 899999999998643  3356778999999999999999999999999764     368999999999887544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHH---HHHHHHh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFS---GLVGLLG  252 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~---~~~~~~~  252 (319)
                                    +...|++||++++.|+++++.+++++|  |+||+|+||++.|++.....    ...   .+....+
T Consensus       155 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 2ae2_A          155 --------------YEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA  218 (260)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC
Confidence                          367899999999999999999999999  99999999999999854321    111   2223344


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       219 ~~~~~~~~dvA~~v~~l~-s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          219 LRRMGEPKELAAMVAFLC-FPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             TCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCHHHHHHHHHHHc-CccccCCCCCEEEECCCc
Confidence            556789999999999999 6888899999887 5553

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-41  Score=309.51  Aligned_cols=240  Identities=24%  Similarity=0.259  Sum_probs=203.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN------------MAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|+++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            456899999999999999999999999999999999876            67777777777655  6689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      +++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.++    +..|+||++|
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~----~~~g~Iv~is  194 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIER----GQGGSVIFVS  194 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT----CSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc----CCCCEEEEEC
Confidence            999999999999999999999999998654  3467789999999999999999999999999764    1368999999


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-----
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-----  244 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-----  244 (319)
                      |..+..+.|               ++..|++||+++++|+++|+.|+++.|  |+||+|+||++.|++.......     
T Consensus       195 S~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (317)
T 3oec_A          195 STVGLRGAP---------------GQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALNEKLLKMFLP  257 (317)
T ss_dssp             CGGGSSCCT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHCHHHHHHHCT
T ss_pred             cHHhcCCCC---------------CCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccchhhhhhhhh
Confidence            999987654               368999999999999999999999999  9999999999999986432111     


Q ss_pred             -------HHHHHH------HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          245 -------SGLVGL------LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       245 -------~~~~~~------~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                             ......      .+ .++.+|+|+|++++||+ ++.+.++||+.|. |+|.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~-s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          258 HLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLA-SDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             TCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTG
T ss_pred             hccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHc-CCcccCCCCCEEEECcch
Confidence                   111111      11 44568999999999999 7899999999888 5554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.1e-41  Score=302.92  Aligned_cols=241  Identities=23%  Similarity=0.301  Sum_probs=201.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..|+++||++|||||++|||+++|++|+++|++|++++| +.+..+...+.+...  +.++.++.+|+++++++.+++++
T Consensus        23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999999999 555556666666554  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.| 
T Consensus       101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-  174 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-----RFGSVVNVASIIGERGNM-  174 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT-
T ss_pred             HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEechhhcCCCC-
Confidence            99999999999999998755  2356788999999999999999999999999875     368999999999987644 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcC
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIK  257 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~  257 (319)
                                    +...|++||++++.|++.++.++++.|  |+||+|+||+++|++.....  ....+....+..++.
T Consensus       175 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  238 (271)
T 4iin_A          175 --------------GQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLG  238 (271)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC------------CGGGCTTCSCB
T ss_pred             --------------CchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCc
Confidence                          368999999999999999999999999  99999999999999877652  112222334556678


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+|+++++|+ ++...+++|+.+. ++|.
T Consensus       239 ~p~dvA~~i~~l~-s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          239 SAKEVAEAVAFLL-SDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHh-CCCcCCCcCCEEEeCCCe
Confidence            9999999999999 6888999999888 5554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.5e-41  Score=303.75  Aligned_cols=237  Identities=20%  Similarity=0.215  Sum_probs=200.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+     +.++.++.+|++++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999998877665543     56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC--c-----ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMATP--F-----MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~--~-----~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++++|+||||||+....  .     +.+.+.|++.+++|+.+++.++++++|+|.+.      .++||++||..+..+.
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~  149 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFYPN  149 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSSS
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhccCC
Confidence            999999999999986431  1     22345699999999999999999999999864      5899999999998764


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------hhHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------SFFS  245 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------~~~~  245 (319)
                      |               +...|++||+++++|+++|+.|+++ +  |+||+|+||+++|++....            ....
T Consensus       150 ~---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  211 (281)
T 3zv4_A          150 G---------------GGPLYTATKHAVVGLVRQMAFELAP-H--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLAD  211 (281)
T ss_dssp             S---------------SCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSSCC--CCCTTCC--------CCHHH
T ss_pred             C---------------CCchhHHHHHHHHHHHHHHHHHhcC-C--CEEEEEECCcCcCCcccccccccccccccchhHHH
Confidence            4               3678999999999999999999986 3  9999999999999986432            1223


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      .+....+..++.+|+|+|++++||++++.+.++||+.+. |+|...
T Consensus       212 ~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          212 MLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             HHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            344556778889999999999999943888999999888 555543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-41  Score=299.87  Aligned_cols=243  Identities=23%  Similarity=0.253  Sum_probs=205.0

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ..+...+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+.+...  +.++.++.+|+++++++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   82 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAF   82 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHH
Confidence            3355678999999999999999999999999999999988 6666666666666554  567999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++||++||..+..+.
T Consensus        83 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~  157 (256)
T 3ezl_A           83 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-----GWGRIINISSVNGQKGQ  157 (256)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCGGGSC
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcchhhccCC
Confidence            9999999999999999998654  3457789999999999999999999999999875     36899999999998865


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYV  255 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~  255 (319)
                      |               ++..|++||+++++|++.++.+++++|  |+||+|+||+++|++....  .....+....+..+
T Consensus       158 ~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T 3ezl_A          158 F---------------GQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRR  220 (256)
T ss_dssp             S---------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSS
T ss_pred             C---------------CCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCccccccCHHHHHHHHhcCCCCC
Confidence            4               468999999999999999999999999  9999999999999987665  23344455566677


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.++|++ ++...+++|+.+. ++|.
T Consensus       221 ~~~~~dva~~~~~l~-s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          221 LGSPDEIGSIVAWLA-SEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHh-CCcccCCcCcEEEECCCE
Confidence            889999999999999 6888999999888 5553

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.9e-41  Score=297.14  Aligned_cols=234  Identities=23%  Similarity=0.236  Sum_probs=201.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC--CCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL--SSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~~~~~v~~~~~~  101 (319)
                      ...++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+  ++++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999998888887653 34788999999  999999999999


Q ss_pred             HHhcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.+.++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|+|+++     +.|+||++||..+..+.|
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~  160 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-----DAGSLVFTSSSVGRQGRA  160 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGTSCCT
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-----CCCEEEEECChhhccCCC
Confidence            9999999999999999853   24467789999999999999999999999999874     478999999999987644


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (319)
                                     ++..|++||+++++|+++|+.|+++.   |+||+|+||+++|++....      .......++.+
T Consensus       161 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~~~------~~~~~~~~~~~  216 (252)
T 3f1l_A          161 ---------------NWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRASA------FPTEDPQKLKT  216 (252)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHHHH------CTTCCGGGSBC
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhhhh------CCccchhccCC
Confidence                           36899999999999999999999753   9999999999999875422      01112234678


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+.++||+ ++.+.++||+.+. |+|.
T Consensus       217 p~dva~~~~~L~-s~~~~~itG~~i~vdgG~  246 (252)
T 3f1l_A          217 PADIMPLYLWLM-GDDSRRKTGMTFDAQPGR  246 (252)
T ss_dssp             TGGGHHHHHHHH-SGGGTTCCSCEEESSCC-
T ss_pred             HHHHHHHHHHHc-CccccCCCCCEEEeCCCc
Confidence            999999999999 6889999999888 4444

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=6.3e-42  Score=308.11  Aligned_cols=238  Identities=23%  Similarity=0.199  Sum_probs=202.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN--MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~--~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++++||++|||||++|||+++|++|+++|++|++++|+  ....+.+.+.+...  +.++.++.+|+++++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999999986  34455555555444  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.++++++|+||||||+...   ..+.+.++|++.+++|+.+++++++.++|.|.+       .|+||++||..+..+.|
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~  194 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQPSP  194 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTSCCT
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhccCCC
Confidence            99999999999999998542   346788999999999999999999999998854       57999999999988654


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKY  254 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~  254 (319)
                                     +...|++||+++++|++.|+.|++++|  |+||+|+||++.|++....    .....+....+..
T Consensus       195 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~  257 (294)
T 3r3s_A          195 ---------------HLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK  257 (294)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTS
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCccccccccCCCHHHHHHHHhcCCCC
Confidence                           368899999999999999999999999  9999999999999873221    2222333445667


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|++++||+ ++.+.++||+.+. ++|.
T Consensus       258 r~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          258 RAGQPAELAPVYVYLA-SQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             SCBCGGGGHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            7889999999999999 7899999999888 5443

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8e-42  Score=307.00  Aligned_cols=239  Identities=24%  Similarity=0.252  Sum_probs=201.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...  +.++.++.+|+++++++++++++
T Consensus        41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~  118 (291)
T 3ijr_A           41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQE  118 (291)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHH
Confidence            3456899999999999999999999999999999999998764 33444444333  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.++++++|+||||||+...   ..+.+.++|++.+++|+.+++++++.++|+|++       .++||++||..+..+.|
T Consensus       119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~  191 (291)
T 3ijr_A          119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYEGNE  191 (291)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHHCCT
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcCCCC
Confidence            99999999999999998643   335678999999999999999999999999854       57999999999987644


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhh
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYV  255 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~  255 (319)
                                     +...|++||+++++|+++|+.|++++|  |+||+|+||++.|++....   .....+....+..+
T Consensus       192 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  254 (291)
T 3ijr_A          192 ---------------TLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQR  254 (291)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSS
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCC
Confidence                           368899999999999999999999999  9999999999999986432   11122223345667


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|++++||+ ++...+++|+.+. ++|.
T Consensus       255 ~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          255 PGQPYELAPAYVYLA-SSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             CBCGGGTHHHHHHHH-SGGGTTCCSCEEEESSSC
T ss_pred             CcCHHHHHHHHHHHh-CCccCCCcCCEEEECCCc
Confidence            789999999999999 6889999999888 5554

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-42  Score=306.54  Aligned_cols=248  Identities=18%  Similarity=0.192  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC------------HHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN------------MAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++....+...  +.++.++.+|+++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            457899999999999999999999999999999999997            77777777776654  6789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +++++++++++.++++++|+||||||+.......+.++|++.+++|+.+++++++.++|+|.+       .++||++||.
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~  155 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS-------GASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc-------CcEEEEeccc
Confidence            999999999999999999999999998765445778999999999999999999999999832       6899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHH----
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL----  247 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~----  247 (319)
                      .+..+.+...    ........+...|++||+++++|++.++.+++++|  |+||+|+||++.|++.........+    
T Consensus       156 ~~~~~~~~~~----~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~  229 (287)
T 3pxx_A          156 AGLIAAAQPP----GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQFRPDL  229 (287)
T ss_dssp             HHHHHHHCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred             hhcccccccc----cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccchhhhhcccc
Confidence            8876431100    00111123467899999999999999999999999  9999999999999997653211111    


Q ss_pred             --------HH------HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          248 --------VG------LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       248 --------~~------~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                              ..      ..+ .++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~-s~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          230 EAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLA-SDESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             SSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             ccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheec-chhhcCCCCceEeECchh
Confidence                    00      112 45678999999999999 7899999999888 5553

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-41  Score=297.79  Aligned_cols=237  Identities=25%  Similarity=0.286  Sum_probs=179.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRT   80 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            357889999999999999999999999999999999999999999988888765  668999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC-----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          103 KSSGLPLNILINNAGIMAT-----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      .+.++++|+||||||+...     ..+.+.+.|++.+++|+.+++.+++.++|.|.++     +.++||++||..++.  
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~--  153 (253)
T 3qiv_A           81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-----GGGAIVNQSSTAAWL--  153 (253)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECCccccC--
Confidence            9999999999999998432     2356788999999999999999999999999875     378999999988773  


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKY  254 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~  254 (319)
                                      +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....   ....+.+..+..
T Consensus       154 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  215 (253)
T 3qiv_A          154 ----------------YSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLS  215 (253)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC---------------------------
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhcCcHHHHHHHhccCCCC
Confidence                            256799999999999999999999999  99999999999999876542   223344455666


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ++.+|+|+|+++++++ ++...+++|+.+..+|
T Consensus       216 ~~~~~~dva~~~~~l~-s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          216 RMGTPDDLVGMCLFLL-SDEASWITGQIFNVDG  247 (253)
T ss_dssp             ----CCHHHHHHHHHH-SGGGTTCCSCEEEC--
T ss_pred             CCCCHHHHHHHHHHHc-CccccCCCCCEEEECC
Confidence            7789999999999999 6888999999888444

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6e-41  Score=293.95  Aligned_cols=234  Identities=23%  Similarity=0.245  Sum_probs=199.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++       .+.++.+|++++++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988776654432       278899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||.. ..+.|    
T Consensus        74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~-~~~~~----  143 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASRV-YLGNL----  143 (245)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCGG-GGCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEccch-hcCCC----
Confidence            99999999999998643  3456788999999999999999999999999764     368999999988 65433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (319)
                                 ++..|++||++++.|+++++.|+++.|  |+||+|+||+++|++.....  ....+....+..++.+|+
T Consensus       144 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~  210 (245)
T 1uls_A          144 -----------GQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPL  210 (245)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHH
Confidence                       367899999999999999999999999  99999999999999876542  122233334556678999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+.+++++ ++...+++|+.+. ++|..
T Consensus       211 dvA~~v~~l~-s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          211 EVAYAALFLL-SDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHh-CchhcCCcCCEEEECCCcc
Confidence            9999999999 6788899999887 55543

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.1e-41  Score=302.40  Aligned_cols=244  Identities=18%  Similarity=0.187  Sum_probs=201.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH---------
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLA---------   93 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---------   93 (319)
                      +.++++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++.... +.++.++.+|+++++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            4568999999999999999999999999999999999 99998888888876333 467999999999999         


Q ss_pred             --------HHHHHHHHHHhcCCCccEEEEccccCCC--CcccC--------------cccccchhhhhhhHHHHHHHHHH
Q 020927           94 --------SVRKFASEFKSSGLPLNILINNAGIMAT--PFMLS--------------KDNIELQFATNHIGHFLLTNLLL  149 (319)
Q Consensus        94 --------~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~--------------~~~~~~~~~vn~~~~~~l~~~~~  149 (319)
                              +++++++++.+.++++|+||||||+...  ..+.+              .++|+..+++|+.+++.+++.++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    9999999999999999999999998643  23455              78899999999999999999999


Q ss_pred             HHHhcccc-cCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Q 020927          150 ETMGKTAR-ESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSV  228 (319)
Q Consensus       150 ~~l~~~~~-~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v  228 (319)
                      |.|.++.. ..+..++||++||..+..+.|               ++..|++||+++++|+++|+.++++.|  |+||+|
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v  225 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGV  225 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEE
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCC---------------CCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEE
Confidence            99976410 001158999999999887644               368999999999999999999999999  999999


Q ss_pred             eCCcccCCcccCch--hHHHHHHHHhhh-hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          229 HPGAITTNLFRNIS--FFSGLVGLLGKY-VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       229 ~PG~v~t~~~~~~~--~~~~~~~~~~~~-~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +||+++|++ . ..  ....+....+.. ++.+|+|+|+.++||+ ++...+++|+++. ++|.
T Consensus       226 ~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          226 GPGLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             EESSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             eeCCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHh-CCcccCccCcEEEECCCc
Confidence            999999998 4 31  112222233445 6789999999999999 6888999999888 5554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-41  Score=295.54  Aligned_cols=229  Identities=20%  Similarity=0.166  Sum_probs=192.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999888877766     2369999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++|++.+++|+.|++.+++.++|.|+++      .++||++||..+..+.|      
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~------  143 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQVGKA------  143 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCSSCS------
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcCCCC------
Confidence            999999999998543  3356789999999999999999999999999764      46999999999988654      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~  264 (319)
                               +...|++||+++++|+++|+.|+++.|  |+||+|+||+++|++......       .+..++.+|+|+|+
T Consensus       144 ---------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~pedvA~  205 (235)
T 3l6e_A          144 ---------NESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNTDH-------VDPSGFMTPEDAAA  205 (235)
T ss_dssp             ---------SHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC------------------CBCHHHHHH
T ss_pred             ---------CCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhccCC-------CCCcCCCCHHHHHH
Confidence                     368999999999999999999999999  999999999999998765421       12335679999999


Q ss_pred             HHHHHhcCCCccCCCcccccCCcccc
Q 020927          265 TTCYVALHPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       265 ~i~~l~~s~~~~~~~G~~~~~~g~~~  290 (319)
                      .+++++.++...+++|-.+.+.....
T Consensus       206 ~v~~l~~~~~~~~i~~i~~~~~~~~~  231 (235)
T 3l6e_A          206 YMLDALEARSSCHVTDLFIGRNEGHH  231 (235)
T ss_dssp             HHHHHTCCCSSEEEEEEEEEECCC--
T ss_pred             HHHHHHhCCCCcceeeEEEecCCCCc
Confidence            99999976888889998877655443

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.5e-41  Score=300.91  Aligned_cols=238  Identities=23%  Similarity=0.195  Sum_probs=186.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999888877766     4678999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|+++.   .+.|+||++||..+..+.|  
T Consensus        98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~--  172 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQE---PRGGRIINNGSISATSPRP--  172 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEEEECCSSTTSCCT--
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCC---CCCcEEEEECchhhcCCCC--
Confidence            999999999999998643   34678899999999999999999999999998741   1258999999999987644  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-HHHHHHHHhhhhcCCH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~  259 (319)
                                   +...|++||+++++|+++|+.|++++|  |+||+|+||+++|++...... ........+..++.+|
T Consensus       173 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p  237 (272)
T 4dyv_A          173 -------------YSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDV  237 (272)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC------------------------CH
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhhcccchhhhhcccccCCCCH
Confidence                         368899999999999999999999999  999999999999998765521 1112223445567799


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      +|+|++++||++.+....+++..+.+.
T Consensus       238 edvA~~v~fL~s~~~~~~~~~i~i~~~  264 (272)
T 4dyv_A          238 AHVASAVVYMASLPLDANVQFMTIMAT  264 (272)
T ss_dssp             HHHHHHHHHHHHSCTTSCCCEEEEEEC
T ss_pred             HHHHHHHHHHhCCCCcCccceEEEecc
Confidence            999999999997666666555554433

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-41  Score=305.33  Aligned_cols=245  Identities=25%  Similarity=0.266  Sum_probs=202.9

Q ss_pred             cccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCC---ceEEEEcCCCCHHHH
Q 020927           19 EEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA---KVQAMELDLSSLASV   95 (319)
Q Consensus        19 ~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~v   95 (319)
                      +....+++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.   ++.++.+|+++++++
T Consensus        16 ~~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           16 PRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             -------CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHH
T ss_pred             cccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHH
Confidence            3333456799999999999999999999999999999999999999888888877654  33   789999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +++++++.++++++|+||||||+...    ..+.+.++|++.+++|+.+++.+++.++|.|.++      +++||++||.
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~IV~isS~  167 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT------KGEIVNVSSI  167 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCG
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc------CCEEEEEcCc
Confidence            99999999999999999999998643    2356778999999999999999999999999863      3899999999


Q ss_pred             ccccCC-CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--h-----
Q 020927          172 RHQFSY-PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--F-----  243 (319)
Q Consensus       172 ~~~~~~-p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~-----  243 (319)
                      .+..+. |               +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++.....  .     
T Consensus       168 ~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~  230 (297)
T 1xhl_A          168 VAGPQAHS---------------GYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDK  230 (297)
T ss_dssp             GGSSSCCT---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred             hhccCCCC---------------CcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCccccccccccccccc
Confidence            888753 3               367899999999999999999999999  99999999999999865431  0     


Q ss_pred             HHHHHH----HHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc-CCccc
Q 020927          244 FSGLVG----LLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA-DSNVA  289 (319)
Q Consensus       244 ~~~~~~----~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~-~~g~~  289 (319)
                      ......    ..+..++.+|+|+|+.++|++ ++. +.+++|+.+. ++|..
T Consensus       231 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~-s~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          231 LYSFIGSRKECIPVGHCGKPEEIANIIVFLA-DRNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             HHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH-CHHHHTTCCSCEEEESTTGG
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh-CCcccCCccCcEEEECCCcc
Confidence            011111    134456789999999999999 566 8899999888 55543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=6.2e-41  Score=296.34  Aligned_cols=239  Identities=20%  Similarity=0.242  Sum_probs=202.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++....++.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999988888887776543344789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++ +|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|    
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  152 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-----GWGRMVYIGSVTLLRPWQ----  152 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECchhhcCCCC----
Confidence            998 9999999997543  3356788999999999999999999999999874     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc----------Cchh---HHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR----------NISF---FSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~----------~~~~---~~~~~~  249 (319)
                                 +...|++||++++.+++.++.++++.|  |+||+|+||++.|++..          ....   ...+..
T Consensus       153 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T 2z1n_A          153 -----------DLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS  219 (260)
T ss_dssp             -----------TBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC-----------------------
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh
Confidence                       367899999999999999999999999  99999999999999866          2111   112222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ..+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       220 ~~p~~r~~~~~dva~~v~~l~-s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          220 RIPMGRVGKPEELASVVAFLA-SEKASFITGAVIPVDGG  257 (260)
T ss_dssp             CCTTSSCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             cCCCCCccCHHHHHHHHHHHh-CccccCCCCCEEEeCCC
Confidence            345566779999999999999 6788899999888 544

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=4.9e-41  Score=297.85  Aligned_cols=245  Identities=16%  Similarity=0.169  Sum_probs=207.1

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+....+. .+++..+.+..++.++.+|+++++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS-VHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH-HHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            467899999999999  679999999999999999999998654443 44444444445899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          102 FKSSGLPLNILINNAGIMA------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +.++++++|+||||||+..      +..+.+.++|+..+++|+.+++.+++.++|.|++       .++||++||.++..
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~  153 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGEL  153 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTS
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEecccccc
Confidence            9999999999999999864      2345678899999999999999999999999864       67999999999988


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLL  251 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~  251 (319)
                      +.|.               +..|++||+++++|+++|+.|+++.|  |+||+|+||+++|++......    ...+....
T Consensus       154 ~~~~---------------~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (266)
T 3oig_A          154 VMPN---------------YNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGISDFNSILKDIEERA  216 (266)
T ss_dssp             CCTT---------------THHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS
T ss_pred             cCCC---------------cchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccccccccccchHHHHHHHHhcC
Confidence            6553               68999999999999999999999999  999999999999998876532    22334445


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChh
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQ  294 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~  294 (319)
                      +..++.+|+|+|+.+++++ ++...+++|+.+. ++|.......
T Consensus       217 ~~~~~~~p~dva~~v~~l~-s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          217 PLRRTTTPEEVGDTAAFLF-SDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             TTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CCCCCCCHHHHHHHHHHHc-CCchhcCcCCEEEECCCeEEeeec
Confidence            6667789999999999999 6888999999888 6666554433

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.9e-41  Score=299.90  Aligned_cols=239  Identities=21%  Similarity=0.234  Sum_probs=201.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++|++|||||++|||+++|++|+++|++|++++ |+.+..+...+.+...  +.++.++.+|++++++++++++++.
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            347899999999999999999999999999999998 6666666666665443  6689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|   
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  170 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-----RFGRIVNIGSVNGSRGAF---  170 (269)
T ss_dssp             HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCT---
T ss_pred             HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEeCChhhccCCC---
Confidence            999999999999998654  3456789999999999999999999999999875     368999999999987644   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH--H-HHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF--S-GLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~--~-~~~~~~~~~~~~~  258 (319)
                                  ++..|++||+++++|++.|+.+++++|  |+||+|+||+++|++.......  . .+....+..++.+
T Consensus       171 ------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
T 3gk3_A          171 ------------GQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGR  236 (269)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBC
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccC
Confidence                        378999999999999999999999999  9999999999999997765211  1 2223345566779


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+.++||+ ++...+++|+.+. ++|.
T Consensus       237 p~dvA~~v~~L~-s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          237 PDEVAALIAFLC-SDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             HHHHHHHHHHHT-STTCTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHh-CCCcCCeeCcEEEECCCE
Confidence            999999999999 6888999999888 4443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=5.7e-41  Score=296.57  Aligned_cols=238  Identities=29%  Similarity=0.271  Sum_probs=197.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++||++|||||++|||++++++|+++|++|++++|+.+. ++++.+++.... +.++.++.+|++++++++++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            679999999999999999999999999999999999877 777777765532 346889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|     
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  150 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASA-----  150 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECcHHhCcCCC-----
Confidence            9999999999998643  3356788999999999999999999999999864     368999999999887544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-------------HHHH-HH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-------------FSGL-VG  249 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~-~~  249 (319)
                                +...|++||++++.|++.++.++++.|  |+||+|+||+++|++......             ...+ ..
T Consensus       151 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T 1x1t_A          151 ----------NKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHH
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc
Confidence                      367899999999999999999999999  999999999999998654310             0111 22


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..+..++.+|+|+|+.++|++ ++...+++|+.+. ++|.
T Consensus       219 ~~p~~~~~~p~dva~~~~~l~-s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          219 KQPSLQFVTPEQLGGTAVFLA-SDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-ChhhcCCCCCEEEECCCc
Confidence            335566789999999999999 6888899999887 5553

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=7.8e-41  Score=298.47  Aligned_cols=240  Identities=25%  Similarity=0.302  Sum_probs=204.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVV   94 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            33689999999999999999999999999999999999998888887777654  5578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHH--HhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLET--MGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~--l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.  |.++     +.++||++||..+..+.| 
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~-  168 (277)
T 2rhc_B           95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQGVV-  168 (277)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-----TEEEEEEECCGGGTSCCT-
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-----CCeEEEEECccccccCCC-
Confidence            999999999999998643  335677899999999999999999999998  8764     357999999999887544 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSG  246 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~  246 (319)
                                    +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++.....             ....
T Consensus       169 --------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  232 (277)
T 2rhc_B          169 --------------HAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR  232 (277)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhhhhhhcccccccchHHHHHH
Confidence                          367899999999999999999999998  99999999999999855321             0111


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +....+..++.+|+|+|+.+++++ ++.+.+++|+.+. ++|.
T Consensus       233 ~~~~~p~~r~~~~~dvA~~v~~l~-s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          233 ITARVPIGRYVQPSEVAEMVAYLI-GPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHh-CchhcCCCCcEEEECCCc
Confidence            222334556789999999999999 6788899999888 5553

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3.2e-41  Score=299.76  Aligned_cols=234  Identities=22%  Similarity=0.215  Sum_probs=197.3

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+..+++||+||||||++|||+++|++|+++|++|++++|+.+..            ...+.++.+|++++++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~   73 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVE   73 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHH
Confidence            3455778999999999999999999999999999999999987543            2257789999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      ++.+.++++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.++|.|.++     +.|+||++||..+..+.|
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  148 (269)
T 3vtz_A           74 KTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-----GHGSIINIASVQSYAATK  148 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSBCT
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCC
Confidence            999999999999999998644  3356788999999999999999999999999875     478999999999988644


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHH
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFS  245 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~  245 (319)
                                     +...|++||+++++|+++++.|+++ +  |+||+|+||++.|++....             ....
T Consensus       149 ---------------~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
T 3vtz_A          149 ---------------NAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIE  210 (269)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHH
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhhhhhccccccchhhHHHHH
Confidence                           3689999999999999999999988 7  9999999999999986432             1122


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      .+....+..++.+|+|+|+.++||+ ++.+.+++|+.+. ++|...
T Consensus       211 ~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          211 EWGRQHPMGRIGRPEEVAEVVAFLA-SDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHHSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHh-CCccCCCcCcEEEECCCccc
Confidence            3334456677789999999999999 6888999999888 555544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.1e-40  Score=295.11  Aligned_cols=239  Identities=21%  Similarity=0.271  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.... +.++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999988888777775542 34688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  152 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-----GGGAIIHNASICAVQPLW----  152 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhcCCCC----
Confidence            99999999999998643  3456778999999999999999999999999764     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~  249 (319)
                                 +...|++||++++.+++.++.+++++|  |+||+|+||++.|++.....             ....+..
T Consensus       153 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
T 3ai3_A          153 -----------YEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVAD  219 (263)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHH
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHh
Confidence                       367899999999999999999999999  99999999999999754321             1111222


Q ss_pred             H-HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          250 L-LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       250 ~-~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      . .+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       220 ~~~p~~~~~~~~dvA~~~~~l~-s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          220 EHAPIKRFASPEELANFFVFLC-SERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HHCTTCSCBCHHHHHHHHHHHT-STTCTTCCSCEEEESTT
T ss_pred             cCCCCCCCcCHHHHHHHHHHHc-CccccCCCCcEEEECCC
Confidence            2 34556789999999999999 6778899999887 444

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1e-40  Score=298.09  Aligned_cols=242  Identities=15%  Similarity=0.153  Sum_probs=203.7

Q ss_pred             cccCCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ..++.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++....  .++.++.+|++++++++++
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHH
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHH
Confidence            334567899999999998  7899999999999999999999987  344555555553  3588999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC------Ccc-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT------PFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~------~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      ++++.+.++++|+||||||+...      ..+ .+.++|++.+++|+.+++.+++.++|.|.+.      .++||++||.
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~  167 (280)
T 3nrc_A           94 FVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR------NASMVALTYI  167 (280)
T ss_dssp             HHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------TCEEEEEECG
T ss_pred             HHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCeEEEEecc
Confidence            99999999999999999998643      123 6788999999999999999999999999763      6899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGL  247 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~  247 (319)
                      ++..+.|               ++..|++||+|++.|++.|+.|++++|  |+||+|+||+++|++.......    ..+
T Consensus       168 ~~~~~~~---------------~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  230 (280)
T 3nrc_A          168 GAEKAMP---------------SYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTLAASGISNFKKMLDYN  230 (280)
T ss_dssp             GGTSCCT---------------TTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCSGGGGCTTHHHHHHHH
T ss_pred             ccccCCC---------------CchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccchhhhcCcchHHHHHHH
Confidence            9988655               368999999999999999999999999  9999999999999998765322    233


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ....+..++.+|+|+|+.++||+ ++...+++|+.+. ++|...
T Consensus       231 ~~~~p~~~~~~pedvA~~v~~l~-s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          231 AMVSPLKKNVDIMEVGNTVAFLC-SDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHHSTTCSCCCHHHHHHHHHHTT-SGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHh-CcccCCcCCcEEEECCCccc
Confidence            34455667789999999999999 6888999999888 555543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6.6e-41  Score=295.82  Aligned_cols=235  Identities=23%  Similarity=0.279  Sum_probs=199.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA--CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.  +++..+++...  +.++.++.+|++++++++++++++.++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999999999877  77777776554  557899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCC-CeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~-~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +. ++||++||..+..+.|    
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~----  149 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDEL-----GVKGKIINAASIAAIQGFP----  149 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCCEEEEECCGGGTSCCT----
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCcEEEEECcchhccCCC----
Confidence            9999999999998644  3356788999999999999999999999999864     24 8999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~  249 (319)
                                 +...|++||++++.|++.++.++++.|  |+||+|+||+++|++....             .....+..
T Consensus       150 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T 3a28_C          150 -----------ILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSS  216 (258)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHh
Confidence                       367899999999999999999999999  9999999999999985431             01111222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..+..++.+|+|+|+.++|++ ++.+.+++|+.+..+|
T Consensus       217 ~~p~~r~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          217 SIALGRPSVPEDVAGLVSFLA-SENSNYVTGQVMLVDG  253 (258)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESS
T ss_pred             cCCCCCccCHHHHHHHHHHHh-CcccCCCCCCEEEECC
Confidence            234556789999999999999 6888999999888443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-40  Score=293.61  Aligned_cols=230  Identities=23%  Similarity=0.285  Sum_probs=195.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ||++|||||++|||+++|++|+++|  +.|++++|+.+.++++.+++     +.++.++.+|++++++++++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999986  68999999998887776655     5579999999999999999999999999


Q ss_pred             CCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          107 LPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|+|++.      +|+||++||..+..+.|     
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~~~~-----  145 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNMYFS-----  145 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCCSSC-----
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhccCCC-----
Confidence            999999999998543   3467789999999999999999999999999874      48999999999887644     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----------hhHHHHHHHHh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----------SFFSGLVGLLG  252 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~  252 (319)
                                ++..|++||+++++|+++|+.|+  .|  |+||+|+||+++|++....           .....+....+
T Consensus       146 ----------~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (254)
T 3kzv_A          146 ----------SWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE  211 (254)
T ss_dssp             ----------CSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh
Confidence                      36899999999999999999998  56  9999999999999987653           12233445566


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCC-ccCCCcccccCCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPH-VKGLTGSYFADSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~~~g~~  289 (319)
                      ..++.+|+|+|++++||+ ++. +.++||+++..+|..
T Consensus       212 ~~r~~~p~dva~~v~~L~-s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          212 NNQLLDSSVPATVYAKLA-LHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             TC----CHHHHHHHHHHH-HHCCCGGGTTCEEETTCGG
T ss_pred             cCCcCCcccHHHHHHHHH-hhcccCCCCccEEEecCcc
Confidence            777889999999999999 577 599999999855543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.5e-41  Score=295.79  Aligned_cols=236  Identities=22%  Similarity=0.233  Sum_probs=190.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999988888765  6689999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++|++++++|+.|++.+++.++|.|+++     +.|+||++||..+..+.|      
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~IV~isS~~~~~~~~------  148 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-----RSGQIINIGSIGALSVVP------  148 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCeEEEEEcCHHHcccCC------
Confidence            999999999998644  3467889999999999999999999999999875     478999999999988654      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH-HHHhhhhcCCHHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV-GLLGKYVIKNVEQGA  263 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~va  263 (319)
                               +...|++||+++++|+++|+.++ + |  |+||+|+||+++|++........... .........+|+|+|
T Consensus       149 ---------~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA  215 (264)
T 3tfo_A          149 ---------TAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIA  215 (264)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC-----------------------CCCHHHHH
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHH
Confidence                     36889999999999999999998 4 7  99999999999999876542111110 001112246899999


Q ss_pred             HHHHHHhcCCCccCCCccccc-CCccc
Q 020927          264 ATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +++++++ ++...+.+|+.+. +.+..
T Consensus       216 ~~v~~l~-s~~~~~~~~~i~i~p~~~~  241 (264)
T 3tfo_A          216 RAVRQVI-EAPQSVDTTEITIRPTASG  241 (264)
T ss_dssp             HHHHHHH-HSCTTEEEEEEEEEECC--
T ss_pred             HHHHHHh-cCCccCccceEEEecCccc
Confidence            9999999 5777778888665 54443

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-40  Score=292.60  Aligned_cols=235  Identities=25%  Similarity=0.319  Sum_probs=200.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999999998888887777654  457899999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.|        
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~--------  147 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEG----HGGKIINACSQAGHVGNP--------  147 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----SCEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC----CCCEEEEECchhhcCCCC--------
Confidence            9999999998643  33567889999999999999999999999998641    157999999999887544        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHHHHHhh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLVGLLGK  253 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~  253 (319)
                             +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++.....             ....+....+.
T Consensus       148 -------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  218 (256)
T 1geg_A          148 -------ELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL  218 (256)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC
Confidence                   367899999999999999999999999  99999999999999854320             01112222345


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .++.+|+|+|+.++|++ ++.+.+++|+.+. ++|
T Consensus       219 ~r~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          219 GRLSEPEDVAACVSYLA-SPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESSS
T ss_pred             CCCcCHHHHHHHHHHHh-CccccCCCCCEEEeCCC
Confidence            56789999999999999 6888899999888 544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.7e-40  Score=297.90  Aligned_cols=246  Identities=24%  Similarity=0.184  Sum_probs=198.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCC----HHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSS----LASVRK   97 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~----~~~v~~   97 (319)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.... +.++.++.+|+++    ++++++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHH
Confidence            44668999999999999999999999999999999999998 77888777776333 4679999999999    999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC--C-----cc-----cCcccccchhhhhhhHHHHHHHHHHHHHhcccc-cCCCCCe
Q 020927           98 FASEFKSSGLPLNILINNAGIMAT--P-----FM-----LSKDNIELQFATNHIGHFLLTNLLLETMGKTAR-ESSKEGR  164 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~--~-----~~-----~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~~~  164 (319)
                      +++++.+.++++|+||||||+...  .     .+     .+.++|++.+++|+.+++.+++.++|.|.++.. .....++
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  175 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLS  175 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEE
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence            999999999999999999998643  2     23     566889999999999999999999999976410 0011579


Q ss_pred             EEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-h
Q 020927          165 IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-F  243 (319)
Q Consensus       165 ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~  243 (319)
                      ||++||..+..+.|               ++..|++||+++++|++.|+.+++++|  |+||+|+||++.|++ .... .
T Consensus       176 iv~isS~~~~~~~~---------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~-~~~~~~  237 (288)
T 2x9g_A          176 IVNLCDAMVDQPCM---------------AFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV-AMGEEE  237 (288)
T ss_dssp             EEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT-TSCHHH
T ss_pred             EEEEecccccCCCC---------------CCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc-ccChHH
Confidence            99999999887544               368899999999999999999999999  999999999999998 4221 1


Q ss_pred             HHHHHHHHhhhhc-CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          244 FSGLVGLLGKYVI-KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       244 ~~~~~~~~~~~~~-~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+....+..++ .+|+|+|+.++||+ ++.+.+++|+++. ++|.
T Consensus       238 ~~~~~~~~p~~r~~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          238 KDKWRRKVPLGRREASAEQIADAVIFLV-SGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HHHHHHTCTTTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHHHh-CccccCccCCEEEECcch
Confidence            2223333455666 79999999999999 6888999999888 5554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.5e-40  Score=291.40  Aligned_cols=239  Identities=22%  Similarity=0.237  Sum_probs=204.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888887777654  5578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..++.+.|  
T Consensus        87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  159 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-----GGGSVLIVSSVGAYHPFP--  159 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCT--
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEEechhhcCCCC--
Confidence            99999999999999753   23456778999999999999999999999999764     368999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~  256 (319)
                                   +...|++||++++.|++.++.++++.|  |+||+|+||++.|++....    .....+....+..++
T Consensus       160 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T 2zat_A          160 -------------NLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRL  224 (260)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSC
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCC
Confidence                         367899999999999999999999999  9999999999999986432    111222333455667


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+|+|+|+.+++++ ++...+++|+.+..+|
T Consensus       225 ~~~~dva~~v~~l~-s~~~~~~tG~~~~vdg  254 (260)
T 2zat_A          225 GNPEDCAGIVSFLC-SEDASYITGETVVVGG  254 (260)
T ss_dssp             BCGGGGHHHHHHHT-SGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHHHHc-CcccCCccCCEEEECC
Confidence            89999999999999 6788899999887444

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.5e-41  Score=304.32  Aligned_cols=234  Identities=18%  Similarity=0.209  Sum_probs=197.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-------HHHHHHHHHHhhCCCCceEEEEcCCCCHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-------ACREVKKAIVKEIPNAKVQAMELDLSSLASV   95 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   95 (319)
                      +.|++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...  +.++.++.+|+++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v   80 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAV   80 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            347799999999999999999999999999999999999876       456666666655  66899999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+
T Consensus        81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~  155 (285)
T 3sc4_A           81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-----DNPHILTLSPPIR  155 (285)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-----SSCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhh
Confidence            99999999999999999999998654  3467789999999999999999999999999764     4789999999988


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCC-cccCCcccCchhHHHHHHHHh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPG-AITTNLFRNISFFSGLVGLLG  252 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~  252 (319)
                      ..+.              ..+...|++||+++++|+++|+.|++++|  |+||+|+|| .+.|++....     .....+
T Consensus       156 ~~~~--------------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~~-----~~~~~~  214 (285)
T 3sc4_A          156 LEPK--------------WLRPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQNL-----LGGDEA  214 (285)
T ss_dssp             CSGG--------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHHH-----HTSCCC
T ss_pred             ccCC--------------CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHhh-----cccccc
Confidence            7642              12357899999999999999999999999  999999999 7899875432     111123


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      ..++.+|+|+|+.++|++ ++.+ +++|+.+..+
T Consensus       215 ~~r~~~pedvA~~~~~l~-s~~~-~~tG~~i~~d  246 (285)
T 3sc4_A          215 MARSRKPEVYADAAYVVL-NKPS-SYTGNTLLCE  246 (285)
T ss_dssp             CTTCBCTHHHHHHHHHHH-TSCT-TCCSCEEEHH
T ss_pred             ccCCCCHHHHHHHHHHHh-CCcc-cccceEEEEc
Confidence            456679999999999999 5666 9999987743

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-41  Score=298.36  Aligned_cols=242  Identities=23%  Similarity=0.215  Sum_probs=202.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..... ..++.++.+|++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999988888777765421 12789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          105 SGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +++++|+||||||+...      ..+.+.+.|++.+++|+.+++.+++.++|.|.++      .++||++||..+..+. 
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~-  155 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQA-  155 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSSC-
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccCCC-
Confidence            99999999999998644      2356778899999999999999999999999764      3899999999888653 


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--h-----HHHHHH--
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--F-----FSGLVG--  249 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~-----~~~~~~--  249 (319)
                                   ..+...|++||++++.|+++++.|+++.|  |+||+|+||++.|++.....  .     ......  
T Consensus       156 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
T 1xkq_A          156 -------------QPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASH  220 (280)
T ss_dssp             -------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------CCcccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCcccccccccccccchHHHHHHH
Confidence                         02367899999999999999999999999  99999999999999865431  0     011111  


Q ss_pred             --HHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc-CCcccc
Q 020927          250 --LLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       250 --~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~-~~g~~~  290 (319)
                        ..+..++.+|+|+|+.+++++ ++. +.+++|+.+. ++|...
T Consensus       221 ~~~~p~~~~~~pedvA~~v~~l~-s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          221 KECIPIGAAGKPEHIANIILFLA-DRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHH-CHHHHTTCCSCEEEESTTGGG
T ss_pred             HcCCCCCCCCCHHHHHHHHHHhc-CcccccCccCCeEEECCCccc
Confidence              134456789999999999999 566 7899999888 555443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=295.20  Aligned_cols=241  Identities=16%  Similarity=0.163  Sum_probs=198.5

Q ss_pred             cccCCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ..+...+++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++....  .++.++.+|++++++++++
T Consensus         6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~   82 (271)
T 3ek2_A            6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEF--GSELVFPCDVADDAQIDAL   82 (271)
T ss_dssp             ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHT--TCCCEEECCTTCHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHc--CCcEEEECCCCCHHHHHHH
Confidence            345577899999999999  999999999999999999999998543 34445555553  3488999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC------Ccc-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT------PFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~------~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      ++++.++++++|+||||||+...      ..+ .+.++|++.+++|+.+++.+++.++|.|++       .++||++||.
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~  155 (271)
T 3ek2_A           83 FASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYL  155 (271)
T ss_dssp             HHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECG
T ss_pred             HHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEecc
Confidence            99999999999999999998642      233 678899999999999999999999999864       5799999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGL  247 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~  247 (319)
                      ++..+.|               ++..|++||+++++|+++++.++++.|  |+||+|+||+++|++.......    ..+
T Consensus       156 ~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  218 (271)
T 3ek2_A          156 GAERAIP---------------NYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIKSFGKILDFV  218 (271)
T ss_dssp             GGTSBCT---------------TTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCHHHHHHHHHH
T ss_pred             ccccCCC---------------CccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhcccchHHHHHHH
Confidence            9987655               368999999999999999999999999  9999999999999998776332    223


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ....+..++.+|+|+|+.++|++ ++.+.+++|+.|. ++|..
T Consensus       219 ~~~~~~~~~~~pedva~~i~~l~-s~~~~~~tG~~i~vdgG~~  260 (271)
T 3ek2_A          219 ESNSPLKRNVTIEQVGNAGAFLL-SDLASGVTAEVMHVDSGFN  260 (271)
T ss_dssp             HHHSTTSSCCCHHHHHHHHHHHH-SGGGTTCCSEEEEESTTGG
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHc-CcccCCeeeeEEEECCCee
Confidence            34455667789999999999999 6888999999888 55544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.2e-40  Score=292.61  Aligned_cols=235  Identities=24%  Similarity=0.276  Sum_probs=191.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|++ +.+++   .+...  +.++.++.+|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987 66554   23222  4578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|   
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~---  149 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIE---  149 (249)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCS---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCeEEEEEcchhhccCCC---
Confidence            999999999999998643  3356788999999999999999999999999874     368999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc-CchhH-HHHHHH--HhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR-NISFF-SGLVGL--LGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~-~~~~~-~~~~~~--~~~~~~~  257 (319)
                                  +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++.. ..... ......  .+..++.
T Consensus       150 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T 2ew8_A          150 ------------AYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ  215 (249)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCC
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCC
Confidence                        367899999999999999999999999  99999999999999865 32100 011111  2445567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       216 ~p~dva~~~~~l~-s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          216 VPLDLTGAAAFLA-SDDASFITGQTLAVDGG  245 (249)
T ss_dssp             CTHHHHHHHHHHT-SGGGTTCCSCEEEESSS
T ss_pred             CHHHHHHHHHHHc-CcccCCCCCcEEEECCC
Confidence            9999999999999 6888899999887 544

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.1e-40  Score=295.72  Aligned_cols=244  Identities=20%  Similarity=0.185  Sum_probs=206.0

Q ss_pred             ccCCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAAC-REVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ...++++||++|||||+  +|||+++|++|+++|++|++++|+.... ++..+++.... +.++.++.+|++++++++++
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~   91 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKL   91 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHH
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHH
Confidence            34578999999999999  9999999999999999999998876544 56666665543 56899999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+
T Consensus        92 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~  166 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-----GTGSLVITASMSGHIA  166 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSC
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-----CCceEEEEcccccccc
Confidence            99999999999999999998654  3456789999999999999999999999999875     3789999999998765


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKY  254 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~  254 (319)
                      .+.             .+...|++||++++.|++.++.++++.   |+||+|+||+++|++.....  ....+....+..
T Consensus       167 ~~~-------------~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  230 (267)
T 3gdg_A          167 NFP-------------QEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMG  230 (267)
T ss_dssp             CSS-------------SCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTS
T ss_pred             CCC-------------CCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhCCHHHHHHHHhcCCCC
Confidence            311             136789999999999999999999754   89999999999999976552  223334445666


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|++++||+ ++.+.++||+.+. |+|.
T Consensus       231 r~~~~~dva~~~~~l~-s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          231 RDGLAKELKGAYVYFA-SDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             SCEETHHHHHHHHHHH-STTCTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHhHhheee-cCccccccCCEEEECCce
Confidence            7788999999999999 6889999999888 5554

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=4.1e-41  Score=298.57  Aligned_cols=230  Identities=23%  Similarity=0.228  Sum_probs=194.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++++||++|||||++|||+++|++|+++|++|++++|+.+.++             ....+.+|+++.+++.++++++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999864321             2245689999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|+|+++     +.|+||++||..+..+.|  
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  161 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-----GGGAIVNVASCWGLRPGP--  161 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTBCCT--
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEECCHHhCCCCC--
Confidence            9999999999999998654  3467789999999999999999999999999875     478999999999887644  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---------hHHHHHHHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---------FFSGLVGLL  251 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~  251 (319)
                                   ++..|++||++++.|+++++.+++++|  |+||+|+||++.|++.....         ....+....
T Consensus       162 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  226 (266)
T 3uxy_A          162 -------------GHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV  226 (266)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS
T ss_pred             -------------CChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC
Confidence                         478999999999999999999999999  99999999999999865321         112233344


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +..++.+|+|+|++++||+ ++.+.+++|+.+. ++|.
T Consensus       227 p~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          227 PLGRIAEPEDIADVVLFLA-SDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             TTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHh-CchhcCCcCCEEEECcCE
Confidence            5667789999999999999 6888999999888 4443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=3.9e-40  Score=291.59  Aligned_cols=231  Identities=24%  Similarity=0.277  Sum_probs=193.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|+++++++.++++++.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999888888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++||++||..+..+.+  
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  174 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-----KRGHIINISSLAGKNPVA--  174 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCCEEEEECSSCSSCCCT--
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCceEEEEechhhcCCCC--
Confidence            999999999999998322   3456788999999999999999999999999874     478999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                   +...|++||+++++|+++++.++++.|  |+||+|+||+++|++.....      ...+..++.+|+
T Consensus       175 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~p~  233 (262)
T 3rkr_A          175 -------------DGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGLS------AKKSALGAIEPD  233 (262)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------------------CCCHH
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCcccccc------cccccccCCCHH
Confidence                         368899999999999999999999999  99999999999999876542      122344567999


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccC
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      |+|+.+++++ ++....++|+.+..
T Consensus       234 dvA~~v~~l~-s~~~~~~~g~~~i~  257 (262)
T 3rkr_A          234 DIADVVALLA-TQADQSFISEVLVR  257 (262)
T ss_dssp             HHHHHHHHHH-TCCTTCCEEEEEEE
T ss_pred             HHHHHHHHHh-cCccccccCcEEec
Confidence            9999999999 57777888887663

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-40  Score=301.05  Aligned_cols=243  Identities=18%  Similarity=0.183  Sum_probs=202.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH-----------
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLA-----------   93 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-----------   93 (319)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++.... +.++.++.+|+++++           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccc
Confidence            38899999999999999999999999999999999 99998888888876333 467999999999999           


Q ss_pred             ------HHHHHHHHHHhcCCCccEEEEccccCCC--CcccC--------------cccccchhhhhhhHHHHHHHHHHHH
Q 020927           94 ------SVRKFASEFKSSGLPLNILINNAGIMAT--PFMLS--------------KDNIELQFATNHIGHFLLTNLLLET  151 (319)
Q Consensus        94 ------~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~--------------~~~~~~~~~vn~~~~~~l~~~~~~~  151 (319)
                            +++++++++.+.++++|+||||||+...  ..+.+              .++|+..+++|+.+++.+++.++|.
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999998643  23455              7889999999999999999999999


Q ss_pred             Hhcccc-cCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 020927          152 MGKTAR-ESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHP  230 (319)
Q Consensus       152 l~~~~~-~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~P  230 (319)
                      |.++.. .....++||++||..+..+.|               ++..|++||++++.|++.|+.++++.|  |+||+|+|
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~P  264 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGP  264 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEE
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCC---------------CcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEec
Confidence            976410 011158999999999887544               368999999999999999999999999  99999999


Q ss_pred             CcccCCcccCch-hHHHHHHHHhhh-hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          231 GAITTNLFRNIS-FFSGLVGLLGKY-VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       231 G~v~t~~~~~~~-~~~~~~~~~~~~-~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |++.|++ .... ....+....+.. ++.+|+|+|++++||+ ++...+++|+++. ++|.
T Consensus       265 G~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          265 GLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             SSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHh-CccccCccCcEEEECCCc
Confidence            9999998 4432 112222334445 6789999999999999 6888999999888 5553

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-40  Score=292.44  Aligned_cols=247  Identities=22%  Similarity=0.217  Sum_probs=194.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++.+|++|||||++|||++++++|+++|++|++++|+.+...+...+..... +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            56678999999999999999999999999999999776544333333332222 46899999999999999999999999


Q ss_pred             cCCCccEEEEccccC--CC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGLPLNILINNAGIM--AT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~--~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +++++|+||||||+.  ..  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||.......   
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~iss~~~~~~~---  153 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-----NFGRIINYGFQGADSAP---  153 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTTGGGCC---
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-----CCCeEEEEeechhcccC---
Confidence            999999999999943  22  3356778999999999999999999999999875     36899999998433111   


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~  258 (319)
                                +..+...|++||++++.|+++|+.+++++|  |+||+|+||++.|++......  ........+..++.+
T Consensus       154 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~  221 (264)
T 3i4f_A          154 ----------GWIYRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGT  221 (264)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCCHHHHHHC--------CCCC
T ss_pred             ----------CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcC
Confidence                      233467999999999999999999999999  999999999999999876521  122233456677789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcccccCh
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASS  293 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~  293 (319)
                      |+|+|+++++++ ++...+++|+.|. ++|......
T Consensus       222 ~~dva~~v~~l~-s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          222 GEDIARTISFLC-EDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESCSCCCCC-
T ss_pred             HHHHHHHHHHHc-CcccCCCCCcEEEEcCceeeccC
Confidence            999999999999 6888999999888 666554443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.1e-41  Score=300.91  Aligned_cols=242  Identities=22%  Similarity=0.221  Sum_probs=194.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.... +..+.++.+|++++++++++++++.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999988888886653 3346899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.++.   .+.|+||++||..+..+.|  
T Consensus       107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~---~~~g~IV~isS~~~~~~~~--  181 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQT---PRGGRIINNGSISAQTPRP--  181 (281)
T ss_dssp             HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSS---SCCEEEEEECCGGGTCCCT--
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCcEEEEECCHHhCCCCC--
Confidence            999999999999998643   34678899999999999999999999999998741   1258999999999987644  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH-HHHHHHHhhhhcCCH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF-SGLVGLLGKYVIKNV  259 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~  259 (319)
                                   ++..|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....... .......+..++.+|
T Consensus       182 -------------~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p  246 (281)
T 4dry_A          182 -------------NSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPI  246 (281)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC-------CEEECTTSCEEECCCBCH
T ss_pred             -------------CChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCH
Confidence                         468999999999999999999999999  9999999999999987654110 011112334456799


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      +|+|++++||++.+....+++..+.+.
T Consensus       247 edvA~~v~fL~s~~~~~~i~~~~i~p~  273 (281)
T 4dry_A          247 EHIAEAVVYMASLPLSANVLTMTVMAT  273 (281)
T ss_dssp             HHHHHHHHHHHHSCTTEEEEEEEEEET
T ss_pred             HHHHHHHHHHhCCCccCccccEEEEec
Confidence            999999999997777776666665533

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.6e-41  Score=296.65  Aligned_cols=236  Identities=22%  Similarity=0.209  Sum_probs=187.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.+...   +.+     +.++.++.+|++++++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999999654332   222     5679999999999999999999887


Q ss_pred             hcCCCccEEEEccccCCCC------cccCcccccchhhhhhhHHHHHHHHHHHHHhccccc---CCCCCeEEEeCCcccc
Q 020927          104 SSGLPLNILINNAGIMATP------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE---SSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~---~~~~~~ii~isS~~~~  174 (319)
                      + ++++|+||||||+....      .+.+.++|++.+++|+.+++.+++.++|.|.+....   .+..|+||++||..+.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 89999999999986431      136788999999999999999999999999863111   1247899999999988


Q ss_pred             cCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHh
Q 020927          175 FSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLG  252 (319)
Q Consensus       175 ~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~  252 (319)
                      .+.|               ++..|++||+++++|++.|+.|++++|  |+||+|+||+++|++.....  ....+....+
T Consensus       155 ~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  217 (257)
T 3tl3_A          155 DGQI---------------GQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASLPEEARASLGKQVP  217 (257)
T ss_dssp             CCHH---------------HHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---CHHHHHHHHHTSS
T ss_pred             CCCC---------------CCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhccHHHHHHHHhcCC
Confidence            7533               467899999999999999999999999  99999999999999987652  2222333444


Q ss_pred             h-hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 K-YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~-~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      . .++.+|+|+|+.++||+. +  .++||+.+. |+|.
T Consensus       218 ~~~r~~~p~dva~~v~~l~s-~--~~itG~~i~vdGG~  252 (257)
T 3tl3_A          218 HPSRLGNPDEYGALAVHIIE-N--PMLNGEVIRLDGAI  252 (257)
T ss_dssp             SSCSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTC
T ss_pred             CCCCccCHHHHHHHHHHHhc-C--CCCCCCEEEECCCc
Confidence            4 677899999999999994 4  789999888 5554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3e-40  Score=295.53  Aligned_cols=240  Identities=23%  Similarity=0.289  Sum_probs=200.3

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ...++++||++|||||++|||++++++|+++|++|++++|+.+. .+.+.+.+...  +.++.++.+|++++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   99 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFE   99 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHH
Confidence            34567899999999999999999999999999999999998654 45555556544  5678999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      ++.+.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.       +.++||++||..+..+.+
T Consensus       100 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-------~~g~iv~isS~~~~~~~~  172 (283)
T 1g0o_A          100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE-------IGGRLILMGSITGQAKAV  172 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC-------TTCEEEEECCGGGTCSSC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh-------cCCeEEEEechhhccCCC
Confidence            999999999999999998644  33567889999999999999999999999993       268999999998876432


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHH
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFS  245 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~  245 (319)
                      .              +...|++||++++.|++.++.|++++|  |+||+|+||++.|++....             ....
T Consensus       173 ~--------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T 1g0o_A          173 P--------------KHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD  236 (283)
T ss_dssp             S--------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHH
T ss_pred             C--------------CCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhhhhhhccccccccCHHHHH
Confidence            1              257899999999999999999999999  9999999999999975432             0111


Q ss_pred             HHHH--HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          246 GLVG--LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       246 ~~~~--~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..  ..+..++.+|+|+|+.++||+ ++.+.+++|+.+. ++|
T Consensus       237 ~~~~~~~~p~~r~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          237 EYAAVQWSPLRRVGLPIDIARVVCFLA-SNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HHHHHHSCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHhhcCCCCCCCcCHHHHHHHHHHHh-CccccCcCCCEEEeCCC
Confidence            2222  334556789999999999999 6888899999887 544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=6.3e-40  Score=287.78  Aligned_cols=232  Identities=25%  Similarity=0.314  Sum_probs=197.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999888888877654  557899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++      +|+||++||..+..+.|     
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~-----  150 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS------KGTVVQMSSIAGRVNVR-----  150 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTCCCT-----
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEccHHhcCCCC-----
Confidence            9999999999998643  3456788999999999999999999999999864      38999999999887544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhc--CCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVI--KNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~--~~~  259 (319)
                                +...|++||+++++|+++++.|++++|  |+||+|+||+++|++......  ........+ .++  .+|
T Consensus       151 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p  217 (247)
T 2jah_A          151 ----------NAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQA  217 (247)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCH
T ss_pred             ----------CCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCH
Confidence                      367899999999999999999999999  999999999999998654321  111112222 344  799


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+|+.+++++ ++...++++++..
T Consensus       218 edvA~~v~~l~-s~~~~~~~~~i~i  241 (247)
T 2jah_A          218 QDIAEAVRYAV-TAPHHATVHEIFI  241 (247)
T ss_dssp             HHHHHHHHHHH-HSCTTEEEEEEEE
T ss_pred             HHHHHHHHHHh-CCCccCccceEEe
Confidence            99999999999 4666666666433

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=4e-40  Score=288.68  Aligned_cols=231  Identities=26%  Similarity=0.289  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC--CCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL--SSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~~~~~v~~~~~~  101 (319)
                      +..++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.... ..++.++.+|+  ++.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999888887653 34566777776  999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +.+.++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|+|+++     +.++||++||..+..+.|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~  162 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-----EDASIAFTSSSVGRKGRA  162 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSEEEEEECCGGGTSCCT
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCeEEEEcchhhcCCCC
Confidence            99999999999999998643   3356789999999999999999999999999764     468999999999887644


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK  257 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (319)
                                     ++..|++||+++++|++.|+.++++ .|  |+||+|+||+++|++.....      ......+..
T Consensus       163 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~  219 (247)
T 3i1j_A          163 ---------------NWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQAY------PDENPLNNP  219 (247)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHHHS------TTSCGGGSC
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchhcc------cccCccCCC
Confidence                           3689999999999999999999976 78  99999999999998754321      111223456


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+|+|+.++||+ ++.+.++||+.|.
T Consensus       220 ~p~dva~~~~~l~-s~~~~~itG~~i~  245 (247)
T 3i1j_A          220 APEDIMPVYLYLM-GPDSTGINGQALN  245 (247)
T ss_dssp             CGGGGTHHHHHHH-SGGGTTCCSCEEE
T ss_pred             CHHHHHHHHHHHh-CchhccccCeeec
Confidence            8999999999999 6899999999876

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=8.1e-41  Score=304.62  Aligned_cols=246  Identities=20%  Similarity=0.207  Sum_probs=204.3

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC----------HHHHHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN----------MAACREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~----------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      .+..++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...  +.++.++.+|++++
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            3456899999999999999999999999999999999998          67778888887665  56899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeC
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVS  169 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~is  169 (319)
                      ++++++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.+.... ....|+||++|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            99999999999999999999999998654  3467889999999999999999999999999754211 12247999999


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG  249 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~  249 (319)
                      |..+..+.|               ++..|++||+|+++|+++|+.|++++|  |+||+|+|| +.|++...... .....
T Consensus       179 S~~~~~~~~---------------~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~~~-~~~~~  239 (322)
T 3qlj_A          179 SGAGLQGSV---------------GQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETVFA-EMMAT  239 (322)
T ss_dssp             CHHHHHCBT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCSCC-C----
T ss_pred             CHHHccCCC---------------CCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhhhh-hhhhc
Confidence            999987644               367899999999999999999999999  999999999 99998765411 11111


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ........+|+|+|++++||+ ++.+.++||+.+. ++|...
T Consensus       240 ~~~~~~~~~pedva~~v~~L~-s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          240 QDQDFDAMAPENVSPLVVWLG-SAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             ----CCTTCGGGTHHHHHHHT-SGGGGGCCSCEEEEETTEEE
T ss_pred             cccccCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCccc
Confidence            223334468999999999999 7889999999888 555544

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=294.97  Aligned_cols=235  Identities=24%  Similarity=0.237  Sum_probs=198.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++     ..++.++.+|++++++++++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777655443     357889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.| ++      .++||++||..+. +.|     
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~------~g~iv~isS~~~~-~~~-----  144 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE------GGSLVLTGSVAGL-GAF-----  144 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT------TCEEEEECCCTTC-CHH-----
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc------CCEEEEEecchhc-CCC-----
Confidence            9999999999998644  3456778999999999999999999999999 42      6799999999887 433     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~  261 (319)
                                +...|++||++++.|++.++.+++++|  |+||+|+||++.|++.....  ....+....+..++.+|+|
T Consensus       145 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~d  212 (263)
T 2a4k_A          145 ----------GLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEE  212 (263)
T ss_dssp             ----------HHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHH
T ss_pred             ----------CcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHH
Confidence                      367899999999999999999999999  99999999999999876542  1222333345566789999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCccccc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNVAQA  291 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~  291 (319)
                      +|+.+++++ ++...+++|+.+. ++|....
T Consensus       213 vA~~v~~l~-s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          213 VAQAALFLL-SEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEESTTTTTC
T ss_pred             HHHHHHHHh-CccccCCcCCEEEECCCcccc
Confidence            999999999 6888899999887 6665443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.5e-40  Score=292.67  Aligned_cols=238  Identities=28%  Similarity=0.300  Sum_probs=195.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+.+..+...+.+...  +.++.++.+|++++++++++++++.+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999998777 78888888888877665  5689999999999999999999999999


Q ss_pred             CCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          107 LPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.+..  .++.++||++||.++..+.+.    
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~----  176 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLY--SGQGGAIVNVSSMAAILGSAT----  176 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCTHHHHCCTT----
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhc--cCCCCEEEEEcchHhccCCCC----
Confidence            999999999998643   33567899999999999999999999999997632  123689999999998875442    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhcCCHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~  260 (319)
                                .+..|++||++++.|++.|+.++++.|  |+||+|+||+++|++.....   ....+....+..++.+|+
T Consensus       177 ----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e  244 (272)
T 4e3z_A          177 ----------QYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPE  244 (272)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------------------CCTTSSCBCHH
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHH
Confidence                      356799999999999999999999999  99999999999999876531   122233334556677899


Q ss_pred             HHHHHHHHHhcCCCccCCCcccccCC
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+|+++++++ ++...+++|+.+..+
T Consensus       245 dvA~~i~~l~-s~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          245 EVADAILYLL-SPSASYVTGSILNVS  269 (272)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEES
T ss_pred             HHHHHHHHHh-CCccccccCCEEeec
Confidence            9999999999 688899999988844

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.3e-40  Score=293.29  Aligned_cols=236  Identities=24%  Similarity=0.218  Sum_probs=199.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988777665544     447889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|     
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  146 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLMGLA-----  146 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCCEEEEECchhhccCCC-----
Confidence            9999999999998643  3356778999999999999999999999999874     368999999999887544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcC-CHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIK-NVE  260 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~  260 (319)
                                +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....  ....+....+..++. +|+
T Consensus       147 ----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~  214 (254)
T 1hdc_A          147 ----------LTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG  214 (254)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHH
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHH
Confidence                      367899999999999999999999999  99999999999999754321  001111122344567 999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+.+++++ ++.+.+++|+.+. ++|..
T Consensus       215 dvA~~v~~l~-s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          215 EIAGAVVKLL-SDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHh-CchhcCCCCCEEEECCCcc
Confidence            9999999999 6788899999888 55544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1e-39  Score=286.43  Aligned_cols=236  Identities=25%  Similarity=0.325  Sum_probs=188.3

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      .....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+     ..++.++.+|+++.+++.++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHH
Confidence            34557889999999999999999999999999999999999998888777665     4578999999999999888776


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      +    .+++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|
T Consensus        81 ~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~  151 (249)
T 3f9i_A           81 K----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-----RYGRIINISSIVGIAGNP  151 (249)
T ss_dssp             T----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCC--CCS
T ss_pred             h----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcEEEEEccHHhccCCC
Confidence            4    4689999999998654  3356778999999999999999999999999874     478999999999887654


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhc
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVI  256 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~  256 (319)
                                     ++..|++||++++.|+++++.+++++|  |+||+|+||++.|++.....  ....+....+..++
T Consensus       152 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  214 (249)
T 3f9i_A          152 ---------------GQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTY  214 (249)
T ss_dssp             ---------------CSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------CCHHHHHHHHHHCTTCSC
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCcccccCHHHHHHHHhcCCCCCC
Confidence                           368899999999999999999999999  99999999999999877652  23334455666778


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+|+|+|+++++++ ++...+++|+.+. ++|.
T Consensus       215 ~~~~dva~~~~~l~-s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          215 GIPEDVAYAVAFLA-SNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             BCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHc-CCccCCccCcEEEECCCE
Confidence            89999999999999 6888999999888 5554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.2e-40  Score=303.06  Aligned_cols=237  Identities=21%  Similarity=0.249  Sum_probs=200.8

Q ss_pred             ccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-------HHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-------CREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      .+....+++||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++++
T Consensus        36 m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~  113 (346)
T 3kvo_A           36 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDE  113 (346)
T ss_dssp             CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCH
T ss_pred             cCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCH
Confidence            3445578999999999999999999999999999999999998764       45556666554  66899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                      ++++++++++.++++++|+||||||+...  ..+.+.++|++++++|+.+++++++.++|+|+++     +.++||++||
T Consensus       114 ~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~g~IV~iSS  188 (346)
T 3kvo_A          114 QQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-----KVAHILNISP  188 (346)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-----SSCEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-----CCCEEEEECC
Confidence            99999999999999999999999998654  3467789999999999999999999999999874     4789999999


Q ss_pred             cccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCc-ccCCcccCchhHHHHHH
Q 020927          171 RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGA-ITTNLFRNISFFSGLVG  249 (319)
Q Consensus       171 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~-v~t~~~~~~~~~~~~~~  249 (319)
                      ..+..+.+             ..++..|++||++++.|++.|+.|++ .|  |+||+|+||. ++|++....      ..
T Consensus       189 ~~~~~~~~-------------~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~~~------~~  246 (346)
T 3kvo_A          189 PLNLNPVW-------------FKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMDML------GG  246 (346)
T ss_dssp             CCCCCGGG-------------TSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHHHH------CC
T ss_pred             HHHcCCCC-------------CCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHHhh------cc
Confidence            98876411             22467899999999999999999999 88  9999999995 999865422      11


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..+..++.+|+|+|+++++|+ ++ +.++||+++.|+|
T Consensus       247 ~~~~~r~~~pedvA~~v~~L~-s~-~~~itG~~ivdgg  282 (346)
T 3kvo_A          247 PGIESQCRKVDIIADAAYSIF-QK-PKSFTGNFVIDEN  282 (346)
T ss_dssp             --CGGGCBCTHHHHHHHHHHH-TS-CTTCCSCEEEHHH
T ss_pred             ccccccCCCHHHHHHHHHHHH-hc-CCCCCceEEECCc
Confidence            223556779999999999999 56 8899999987766

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-40  Score=294.30  Aligned_cols=231  Identities=21%  Similarity=0.261  Sum_probs=196.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.+...           ..++.++.+|++++++++++++++
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHH
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999864321           347899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.|++.++++++|.|+++     +.++||++||..+..+.+  
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  163 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-----GSGHIVSITTSLVDQPMV--  163 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCTTTTSCBT--
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEEechhhccCCC--
Confidence            9999999999999998654  3366789999999999999999999999999875     478999999988764332  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                 ..+...|++||++++.|+++++.+++++|  |+||+|+||++.|++.... ....+....+..++.+|+
T Consensus       164 -----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~-~~~~~~~~~p~~r~~~~~  229 (260)
T 3un1_A          164 -----------GMPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPAE-THSTLAGLHPVGRMGEIR  229 (260)
T ss_dssp             -----------TCCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCGG-GHHHHHTTSTTSSCBCHH
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCHH-HHHHHhccCCCCCCcCHH
Confidence                       22357899999999999999999999999  9999999999999987642 233344455677788999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|++++||.   ...+++|+.+. ++|.
T Consensus       230 dva~av~~L~---~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          230 DVVDAVLYLE---HAGFITGEILHVDGGQ  255 (260)
T ss_dssp             HHHHHHHHHH---HCTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhc---ccCCCCCcEEEECCCe
Confidence            9999999993   46789999888 4443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=5.2e-40  Score=291.48  Aligned_cols=230  Identities=18%  Similarity=0.226  Sum_probs=191.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..        ..++.++.+|++++++++++++++.
T Consensus        11 ~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (266)
T 3p19_A           11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAE   82 (266)
T ss_dssp             ----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999987654321        3478899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.|++.+++.++|.|++.     +.|+||++||.++..+.|   
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-----~~g~IV~isS~~~~~~~~---  154 (266)
T 3p19_A           83 KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-----NCGTIINISSIAGKKTFP---  154 (266)
T ss_dssp             HHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT---
T ss_pred             HHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhCCCCC---
Confidence            999999999999998644  3456788999999999999999999999999875     378999999999987654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh---HHHHHH-HHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVG-LLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~-~~~~~~~~  257 (319)
                                  +...|++||+++++|+++|+.+++++|  |+||+|+||+++|++......   ...+.. ..+..++.
T Consensus       155 ------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~  220 (266)
T 3p19_A          155 ------------DHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVL  220 (266)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCB
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCC
Confidence                        368999999999999999999999999  999999999999998765521   111111 23556678


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+|+|++++|++. .......++.+.
T Consensus       221 ~pedvA~av~~l~~-~~~~~~~~~i~i  246 (266)
T 3p19_A          221 AADDVARAVLFAYQ-QPQNVCIREIAL  246 (266)
T ss_dssp             CHHHHHHHHHHHHH-SCTTEEEEEEEE
T ss_pred             CHHHHHHHHHHHHc-CCCCccceeeEE
Confidence            99999999999995 455555666444

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.1e-39  Score=288.02  Aligned_cols=238  Identities=21%  Similarity=0.200  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLAL---RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~---~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++++|++|||||++|||++++++|++   +|++|++++|+.+.++++.+++....++.++.++.+|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357899999999999999999999999   89999999999999998888887766567899999999999999999999


Q ss_pred             HHh--cCCCcc--EEEEccccCCC----Ccc-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          102 FKS--SGLPLN--ILINNAGIMAT----PFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       102 i~~--~~~~id--~lv~nag~~~~----~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      +.+  .++++|  +||||||+...    ..+ .+.++|++.+++|+.+++.+++.++|.|.++.   +..|+||++||..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~  158 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC  158 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGG
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCch
Confidence            988  678898  99999998543    224 56789999999999999999999999997530   0257999999999


Q ss_pred             cccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------hHH
Q 020927          173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------FFS  245 (319)
Q Consensus       173 ~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------~~~  245 (319)
                      +..+.|               +...|++||+++++|+++|+.|++  +  |+||+|+||+++|++.....       ...
T Consensus       159 ~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  219 (259)
T 1oaa_A          159 ALQPYK---------------GWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQLARETSKDPELRS  219 (259)
T ss_dssp             GTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHH
T ss_pred             hcCCCC---------------CccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHHHhhccCChhHHH
Confidence            987544               368899999999999999999996  3  99999999999999865421       112


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      .+....+..++.+|+|+|+.+++++. + ..++||+.+..+
T Consensus       220 ~~~~~~p~~~~~~p~dvA~~v~~l~~-~-~~~itG~~i~vd  258 (259)
T 1oaa_A          220 KLQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEETT
T ss_pred             HHHHhhhcCCcCCHHHHHHHHHHHHh-h-ccccCCcEEecc
Confidence            23334456677899999999999994 4 688999988744

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-39  Score=291.37  Aligned_cols=243  Identities=16%  Similarity=0.191  Sum_probs=201.5

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      +..+++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~   96 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIE   96 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHH
Confidence            34457899999999999999999999999999999999999999888877766     5679999999999999999999


Q ss_pred             HHHhcCCCccEEEEc-cccCCCC-------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccc-cCCCCCeEEEeCCc
Q 020927          101 EFKSSGLPLNILINN-AGIMATP-------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTAR-ESSKEGRIVNVSSR  171 (319)
Q Consensus       101 ~i~~~~~~id~lv~n-ag~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~~~ii~isS~  171 (319)
                      ++ ++++++|++||| +|+....       .+.+.++|++.+++|+.+++++++.++|.|.+... ..+..++||++||.
T Consensus        97 ~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           97 AA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            99 788999999999 5543221       24566789999999999999999999999976321 11247899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVG  249 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~  249 (319)
                      .+..+.|               ++..|++||+|+++|++.|+.++++.|  |+||+|+||+++|++.....  ....+..
T Consensus       176 ~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  238 (281)
T 3ppi_A          176 AGYEGQI---------------GQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESVGEEALAKFAA  238 (281)
T ss_dssp             GGTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTTCHHHHHHHHH
T ss_pred             cccCCCC---------------CCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcccHHHHHHHHh
Confidence            9998654               368999999999999999999999999  99999999999999877652  2223333


Q ss_pred             HHhh-hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          250 LLGK-YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       250 ~~~~-~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      ..+. .++.+|+|+|+++++++. +  .+++|+.+..+|..
T Consensus       239 ~~~~~~~~~~pedvA~~v~~l~s-~--~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          239 NIPFPKRLGTPDEFADAAAFLLT-N--GYINGEVMRLDGAQ  276 (281)
T ss_dssp             TCCSSSSCBCHHHHHHHHHHHHH-C--SSCCSCEEEESTTC
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHc-C--CCcCCcEEEECCCc
Confidence            3444 567799999999999994 3  68999988844433

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.8e-40  Score=289.33  Aligned_cols=238  Identities=26%  Similarity=0.309  Sum_probs=199.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+     ..++.++.+|++++++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999988776655433     226888999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .++++++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.|  
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~--  154 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASN----TKGVIVNTASLAAKVGAP--  154 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTSCCT--
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----CCeEEEEecccccccCCC--
Confidence            9999999999999998643  34567789999999999999999999999997641    258999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGL  247 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~  247 (319)
                                   +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....             ....+
T Consensus       155 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (263)
T 3ak4_A          155 -------------LLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEY  219 (263)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhhhccccccccccCcHHHHHHH
Confidence                         367899999999999999999999999  99999999999999854321             01112


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ....+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       220 ~~~~p~~~~~~~~dvA~~v~~l~-s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          220 VSLTPLGRIEEPEDVADVVVFLA-SDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHTCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESSS
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHh-CccccCCCCCEEEECcC
Confidence            22234556789999999999999 6778899999887 544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=288.29  Aligned_cols=237  Identities=21%  Similarity=0.211  Sum_probs=194.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999999999888888887665  567899999999999999999999876


Q ss_pred             -CCCccEEEEccc--cC-------CCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          106 -GLPLNILINNAG--IM-------ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       106 -~~~id~lv~nag--~~-------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                       ++++|+||||||  +.       .+..+.+.+.|+..+++|+.+++.+++.++|.|.++     +.++||++||..+..
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~  154 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-----GQGLIVVISSPGSLQ  154 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-----TCCEEEEECCGGGTS
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-----CCcEEEEEcChhhcC
Confidence             899999999995  32       223456778999999999999999999999999764     368999999998875


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH-----HHHH-
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS-----GLVG-  249 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~-----~~~~-  249 (319)
                      +.                +...|++||++++.|+++++.|+++.|  |+||+|+||+++|++........     .... 
T Consensus       155 ~~----------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (260)
T 2qq5_A          155 YM----------------FNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ  216 (260)
T ss_dssp             CC----------------SSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC-----------------
T ss_pred             CC----------------CCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHHhhccccccchhHHHH
Confidence            32                246899999999999999999999999  99999999999999865431100     0011 


Q ss_pred             -HHhhhhcCCHHHHHHHHHHHhcCCCc-cCCCcccccCCcc
Q 020927          250 -LLGKYVIKNVEQGAATTCYVALHPHV-KGLTGSYFADSNV  288 (319)
Q Consensus       250 -~~~~~~~~~~~~va~~i~~l~~s~~~-~~~~G~~~~~~g~  288 (319)
                       ..+..+..+|+|+|+.++||+ ++.. .++||+++..++.
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~-s~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALA-TDPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHH-TCTTGGGGTTCEEEHHHH
T ss_pred             HHhhhccCCCHHHHHHHHHHHh-cCcccccccceeechhhh
Confidence             112233468999999999999 4554 5899999886543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-40  Score=291.38  Aligned_cols=239  Identities=24%  Similarity=0.282  Sum_probs=194.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++... ..+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998888877776422 1245789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--Cccc----CcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc-ccCC
Q 020927          105 SGLPLNILINNAGIMAT--PFML----SKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH-QFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~-~~~~  177 (319)
                      +++++|+||||||+...  ..+.    +.++|++.+++|+.+++.+++.++|.|+++      .++||++||..+ ..+.
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~  156 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHAT  156 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSCC
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEecccccccCC
Confidence            99999999999998543  2234    778999999999999999999999999764      489999999988 6643


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----h------HHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----F------FSG  246 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~------~~~  246 (319)
                      |               +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....     .      ...
T Consensus       157 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T 1spx_A          157 P---------------DFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  219 (278)
T ss_dssp             T---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             C---------------CccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccccccCchhhhhhhHHHHH
Confidence            3               367899999999999999999999999  99999999999999865321     1      122


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccC-CCcccccCCcc
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKG-LTGSYFADSNV  288 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~-~~G~~~~~~g~  288 (319)
                      +....+..++.+|+|+|+.+++++ ++...+ ++|+.+..+|.
T Consensus       220 ~~~~~p~~~~~~~~dvA~~v~~l~-s~~~~~~~tG~~~~vdgG  261 (278)
T 1spx_A          220 MKECVPAGVMGQPQDIAEVIAFLA-DRKTSSYIIGHQLVVDGG  261 (278)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHH-CHHHHTTCCSCEEEESTT
T ss_pred             HHhcCCCcCCCCHHHHHHHHHHHc-CccccCcccCcEEEECCC
Confidence            223334556789999999999999 566666 99998874443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-40  Score=288.37  Aligned_cols=233  Identities=26%  Similarity=0.266  Sum_probs=195.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+. ++..+.+     . + .++.+|++++++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999876 5554444     2 3 7889999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~----  144 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLFAEQ----  144 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTSBCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEccccccCCCC----
Confidence            99999999999998644  3356778999999999999999999999999864     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (319)
                                 +...|++||++++.|++.++.++++.|  |+||+|+||++.|++....        .....+....+..
T Consensus       145 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (256)
T 2d1y_A          145 -----------ENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR  211 (256)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC
Confidence                       367899999999999999999999999  9999999999999875431        0111122223445


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       212 ~~~~~~dvA~~~~~l~-s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          212 RLGKPEEVAEAVLFLA-SEKASFITGAILPVDGGM  245 (256)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHh-CchhcCCCCCEEEECCCc
Confidence            6789999999999999 6778899999887 5554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-40  Score=289.65  Aligned_cols=234  Identities=24%  Similarity=0.266  Sum_probs=199.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998877766655     457899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++      +++||++||..+..+.|     
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~-----  146 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLPIE-----  146 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc------CCEEEEEcchhhcCCCC-----
Confidence            9999999999998643  3456778999999999999999999999999764      38999999999887544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCcccCCcccCc---hhHHH-HHH---HHhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTNLFRNI---SFFSG-LVG---LLGKY  254 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~--g~~i~v~~v~PG~v~t~~~~~~---~~~~~-~~~---~~~~~  254 (319)
                                +...|++||++++.|++.++.|++++  |  |+||+|+||++.|++....   ..... +..   ..+..
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~  214 (253)
T 1hxh_A          147 ----------QYAGYSASKAAVSALTRAAALSCRKQGYA--IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG  214 (253)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhhhcCCC--eEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccC
Confidence                      36789999999999999999999988  7  9999999999999975431   11111 111   23445


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.+++++ ++...+++|+++. ++|.
T Consensus       215 ~~~~~~dvA~~~~~l~-s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          215 RAYMPERIAQLVLFLA-SDESSVMSGSELHADNSI  248 (253)
T ss_dssp             CEECHHHHHHHHHHHH-SGGGTTCCSCEEEESSSC
T ss_pred             CCCCHHHHHHHHHHHc-CccccCCCCcEEEECCCc
Confidence            5679999999999999 6888899999887 5553

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.7e-40  Score=288.46  Aligned_cols=234  Identities=28%  Similarity=0.331  Sum_probs=200.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|+++.++++++++++.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999998885 67888888888887665  668999999999999999999998776


Q ss_pred             C------CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          106 G------LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       106 ~------~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +      +++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.++|.|.+       .++||++||.++..+.
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~  155 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL  155 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTSCC
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhccCC
Confidence            5      359999999998644  235678899999999999999999999999844       5799999999998865


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~  253 (319)
                      |.               +..|++||++++.|+++|+.+++++|  |+||+|+||+++|++......    ........+.
T Consensus       156 ~~---------------~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  218 (255)
T 3icc_A          156 PD---------------FIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF  218 (255)
T ss_dssp             TT---------------BHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT
T ss_pred             CC---------------cchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhcccHHHHHhhhccCCc
Confidence            53               68999999999999999999999999  999999999999999876521    1222233455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .++.+|+|+|++++||+ ++...+++|+.+..+|
T Consensus       219 ~~~~~~~dva~~~~~l~-s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          219 NRLGEVEDIADTAAFLA-SPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             SSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESS
T ss_pred             CCCCCHHHHHHHHHHHh-CcccCCccCCEEEecC
Confidence            66789999999999999 6889999999988443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.5e-39  Score=288.37  Aligned_cols=242  Identities=18%  Similarity=0.162  Sum_probs=195.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCH----HHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSL----ASVRKFAS  100 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~----~~v~~~~~  100 (319)
                      +|+||++|||||++|||++++++|+++|++|++++| +.+.++++.+++.... +.++.++.+|++++    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            468999999999999999999999999999999999 9888888888776553 34789999999999    99999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCc-----------ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEE
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSK-----------DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVN  167 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~-----------~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~  167 (319)
                      ++.+.++++|+||||||+...  ..+.+.           ++|++.+++|+.+++.+++.++|.|..........++||+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence            999999999999999998643  234555           8899999999999999999999998621000112389999


Q ss_pred             eCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHH
Q 020927          168 VSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFS  245 (319)
Q Consensus       168 isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~  245 (319)
                      +||..+..+.|               ++..|++||++++.|++.|+.++++.|  |+||+|+||++.|+  ...  ....
T Consensus       167 isS~~~~~~~~---------------~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~--~~~~~~~~~  227 (276)
T 1mxh_A          167 LCDAMTDLPLP---------------GFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP--PAMPQETQE  227 (276)
T ss_dssp             ECCGGGGSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC--SSSCHHHHH
T ss_pred             ECchhhcCCCC---------------CCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC--ccCCHHHHH
Confidence            99999887544               367899999999999999999999999  99999999999999  222  1112


Q ss_pred             HHHHHHhhhh-cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          246 GLVGLLGKYV-IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       246 ~~~~~~~~~~-~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+....+..+ +.+|+|+|+.+++++ ++...+++|+++. ++|.
T Consensus       228 ~~~~~~p~~r~~~~~~dva~~v~~l~-s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          228 EYRRKVPLGQSEASAAQIADAIAFLV-SKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHHTTCTTTSCCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHh-CccccCccCcEEEECCch
Confidence            2222344455 779999999999999 6788899999887 5554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=8.2e-40  Score=288.33  Aligned_cols=235  Identities=24%  Similarity=0.228  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||++++++|+++|++|++++|+.+  +...+++...  +.++.++.+|++++++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999875  4445555443  457889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|     
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~-----  146 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-----NWGRIINIASVHGLVGST-----  146 (255)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcCchhccCCC-----
Confidence            9999999999998643  2356778999999999999999999999999874     368999999999887544     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--------H----HHH-HHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--------F----SGL-VGL  250 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--------~----~~~-~~~  250 (319)
                                +...|++||++++.|++.++.|+++.|  |+||+|+||++.|++......        .    ..+ ...
T Consensus       147 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T 2q2v_A          147 ----------GKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEK  214 (255)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTT
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhcc
Confidence                      367899999999999999999999999  999999999999998653210        0    011 111


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..++.+|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       215 ~p~~~~~~~~dvA~~~~~l~-s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          215 QPSLAFVTPEHLGELVLFLC-SEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             CTTCCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTT
T ss_pred             CCCCCCcCHHHHHHHHHHHh-CCccCCCCCCEEEECCC
Confidence            24455679999999999999 6778899999887 554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.6e-39  Score=288.06  Aligned_cols=235  Identities=13%  Similarity=0.198  Sum_probs=196.7

Q ss_pred             CCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++|++|||||+  +|||++++++|+++|++|++++|+. ..++..+++....+  ...++.+|++++++++++++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHH
Confidence            789999999999  9999999999999999999999987 44445555555432  347899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC------Ccc-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMAT------PFM-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~------~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++++|+||||||+...      ..+ .+.++|++.+++|+.+++.++++++|.|.+       .++||++||..+..+.
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~  156 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERAI  156 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSBC
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhccCC
Confidence            99999999999998642      224 677899999999999999999999999864       4799999999888754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH----HHHHHHhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS----GLVGLLGK  253 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~  253 (319)
                      |               ++..|++||++++.|++.++.+++++|  |+||+|+||++.|++........    .+....+.
T Consensus       157 ~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~  219 (265)
T 1qsg_A          157 P---------------NYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI  219 (265)
T ss_dssp             T---------------TTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT
T ss_pred             C---------------CchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC
Confidence            4               367899999999999999999999999  99999999999999876542222    22223355


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .++.+|+|+|+.+++++ ++...+++|+.+. ++|..
T Consensus       220 ~~~~~~~dva~~v~~l~-s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          220 RRTVTIEDVGNSAAFLC-SDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             SSCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHHh-CchhcCccCCEEEECCCcC
Confidence            56789999999999999 6788899999887 55543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=4.6e-40  Score=292.18  Aligned_cols=232  Identities=19%  Similarity=0.185  Sum_probs=192.5

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        26 ~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +++||++|||||  ++|||++++++|+++|++|++++|+.+. +++..    .+. +.++.++.+|++++++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRL-PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH----TTS-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH----Hhc-CCCceEEEccCCCHHHHHHHHHHH
Confidence            578999999999  9999999999999999999999998755 23332    222 446889999999999999999999


Q ss_pred             HhcCC---CccEEEEccccCC-------CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          103 KSSGL---PLNILINNAGIMA-------TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       103 ~~~~~---~id~lv~nag~~~-------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .++++   ++|+||||||+..       +..+.+.++|++.+++|+.+++.+++.++|+|.+       .++||++||..
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~  151 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDP  151 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCC
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCcc
Confidence            99988   9999999999864       2345678899999999999999999999999865       46999999976


Q ss_pred             cccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------hh---
Q 020927          173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------SF---  243 (319)
Q Consensus       173 ~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------~~---  243 (319)
                      + .+               ...+..|++||++++.|+++++.+++++|  |+||+|+||+++|++....      ..   
T Consensus       152 ~-~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  213 (269)
T 2h7i_A          152 S-RA---------------MPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGA  213 (269)
T ss_dssp             S-SC---------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHH
T ss_pred             c-cc---------------cCchHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhhccccccchhhHHH
Confidence            5 32               22467899999999999999999999999  9999999999999975432      10   


Q ss_pred             -----HHHHHHHHhhh-hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          244 -----FSGLVGLLGKY-VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       244 -----~~~~~~~~~~~-~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                           ...+....+.. ++.+|+|+|+.++||+ ++.+.++||+.+. |+|.
T Consensus       214 ~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~-s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          214 QIQLLEEGWDQRAPIGWNMKDATPVAKTVCALL-SDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHH-SSSCTTCCSEEEEESTTG
T ss_pred             HHHHHHHhhhccCCcccCCCCHHHHHHHHHHHh-CchhccCcceEEEecCCe
Confidence                 11122334555 5789999999999999 6889999999888 5554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2.3e-39  Score=286.34  Aligned_cols=234  Identities=21%  Similarity=0.234  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++     ..++.++.+|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----hcCceEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998877665554     23588899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  148 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLAGTV----  148 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEeehhhcCCCC----
Confidence            99999999999998643  3356778999999999999999999999999874     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 +...|++||++++.+++.++.++++.|  |+||+|+||++.|++.. ... ..+. ..+..++.+|+|+
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~-~~~-~~~~-~~~~~~~~~~~dv  212 (260)
T 1nff_A          149 -----------ACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD-WVP-EDIF-QTALGRAAEPVEV  212 (260)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGT-TSC-TTCS-CCSSSSCBCHHHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccc-cch-hhHH-hCccCCCCCHHHH
Confidence                       367899999999999999999999999  99999999999999854 110 0010 2234556799999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+.+++++ ++...+++|+.+. ++|..
T Consensus       213 A~~v~~l~-s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          213 SNLVVYLA-SDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHh-CccccCCcCCEEEECCCee
Confidence            99999999 6778899999887 55543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-39  Score=288.66  Aligned_cols=235  Identities=22%  Similarity=0.269  Sum_probs=197.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||++|||||++|||++++++|+++|++|++++|+++.++++.+++      .++.++.+|++++++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988776655433      247889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|+|.+.      .++||++||..+..+.|  
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~--  149 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQA--  149 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCT--
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccCCCC--
Confidence            999999999999998642   3356778999999999999999999999999763      58999999998887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHH---HHHHh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGL---VGLLG  252 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~---~~~~~  252 (319)
                                   +...|++||++++.|+++++.+++++|  |+||+|+||++.|++.....     ....+   ....+
T Consensus       150 -------------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p  214 (270)
T 1yde_A          150 -------------QAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP  214 (270)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST
T ss_pred             -------------CCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC
Confidence                         367899999999999999999999999  99999999999999754321     11111   12235


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|+|+|+.++||++ + +.+++|+.+. ++|..
T Consensus       215 ~~r~~~p~dva~~v~~L~s-~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          215 LGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             TSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHcc-c-CCCcCCCEEEECCCee
Confidence            5667899999999999994 5 6899999887 55543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.1e-39  Score=286.65  Aligned_cols=236  Identities=17%  Similarity=0.191  Sum_probs=198.3

Q ss_pred             CCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+  .+.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG--GALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999  99999999999999999999999875 4444555555432  3788999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          103 KSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .+.++++|+||||||+...      ..+.+.++|++.+++|+.++++++++++|.|++       .++||++||..+..+
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV  153 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccCC
Confidence            9999999999999998642      335678899999999999999999999999853       479999999988875


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~  252 (319)
                      .|               ++..|++||++++.|++.++.+++++|  |+||+|+||++.|++.......    ..+....+
T Consensus       154 ~~---------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p  216 (261)
T 2wyu_A          154 VP---------------KYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP  216 (261)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHST
T ss_pred             CC---------------CchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhhccccHHHHHHHHhcCC
Confidence            44               367899999999999999999999999  9999999999999986543211    22233345


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       217 ~~~~~~~~dva~~v~~l~-s~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          217 LRRNITQEEVGNLGLFLL-SPLASGITGEVVYVDAGY  252 (261)
T ss_dssp             TSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCHHHHHHHHHHHc-ChhhcCCCCCEEEECCCc
Confidence            566789999999999999 6888899999887 5554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1e-39  Score=287.53  Aligned_cols=227  Identities=26%  Similarity=0.308  Sum_probs=186.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+             ..+.++.+|++++++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999986432             1378899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|+++     +.++||++||..+..+.|    
T Consensus        84 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~----  154 (253)
T 2nm0_A           84 THGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-----KKGRVVLISSVVGLLGSA----  154 (253)
T ss_dssp             HTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCCCCCCCHH----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCCCCC----
Confidence            99999999999998643  3356788999999999999999999999999864     368999999998876433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (319)
                                 +...|++||++++.|++.++.++++.|  |+||+|+||+++|++.....  ....+....+..++.+|+
T Consensus       155 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~  221 (253)
T 2nm0_A          155 -----------GQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPE  221 (253)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHH
T ss_pred             -----------CcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHH
Confidence                       367899999999999999999999999  99999999999999865431  112222233455678999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      |+|+.+++++ ++...+++|+.+. ++|
T Consensus       222 dvA~~i~~l~-s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          222 EIAATVRFLA-SDDASYITGAVIPVDGG  248 (253)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHh-CccccCCcCcEEEECCc
Confidence            9999999999 6788899999888 444

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.7e-39  Score=282.17  Aligned_cols=228  Identities=26%  Similarity=0.286  Sum_probs=182.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+.         .   ...+.++.+|++++++++++++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999998641         1   11278899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~----  141 (250)
T 2fwm_X           71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-----RGGAIVTVASDAAHTPRI----  141 (250)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-----CCCEEEEECchhhCCCCC----
Confidence            99999999999998643  3456788999999999999999999999999875     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHH-HHHH-------H
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFS-GLVG-------L  250 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~-~~~~-------~  250 (319)
                                 +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....    ... .+..       .
T Consensus       142 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (250)
T 2fwm_X          142 -----------GMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLG  208 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-----------------------------
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccccccChhHHHHHHhhhhhccccc
Confidence                       367899999999999999999999999  99999999999999865421    011 2222       3


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      .+..++.+|+|+|+.+++++ ++.+.+++|+.+. ++|
T Consensus       209 ~p~~~~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          209 IPLGKIARPQEIANTILFLA-SDLASHITLQDIVVDGG  245 (250)
T ss_dssp             -------CHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             CCCCCCcCHHHHHHHHHHHh-CccccCCCCCEEEECCC
Confidence            44556789999999999999 6778899999888 444

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.2e-38  Score=279.47  Aligned_cols=243  Identities=22%  Similarity=0.245  Sum_probs=204.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+...  +.++.++.+|++++++++++++++
T Consensus         7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   84 (260)
T 3awd_A            7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSV   84 (260)
T ss_dssp             GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888777777654  557999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC-C--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLPLNILINNAGIMA-T--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~-~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .++++++|+||||||+.. .  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|.
T Consensus        85 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~  159 (260)
T 3awd_A           85 HEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-----KQGVIVAIGSMSGLIVNRP  159 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCSS
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-----CCCEEEEEecchhcccCCC
Confidence            998999999999999865 2  3356778899999999999999999999999764     3689999999988765442


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc-Cc---hhHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR-NI---SFFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~-~~---~~~~~~~~~~~~~~  255 (319)
                                   .+...|++||++++.+++.++.++++.|  |++++|+||++.|++.. ..   .+...+....+..+
T Consensus       160 -------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T 3awd_A          160 -------------QQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGR  224 (260)
T ss_dssp             -------------SCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSS
T ss_pred             -------------CCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCC
Confidence                         1237899999999999999999999989  99999999999999865 22   12222333344556


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       225 ~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          225 VGQPDEVASVVQFLA-SDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTT
T ss_pred             CCCHHHHHHHHHHHh-CchhccCCCcEEEECCce
Confidence            789999999999999 5777889999877 5443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-38  Score=284.63  Aligned_cols=241  Identities=26%  Similarity=0.336  Sum_probs=201.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+++.++++.+.+...  +.++.++.+|++++++++++++++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHH
Confidence            446789999999999999999999999999999999999998888877777654  557899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++||++||..+..+.|  
T Consensus       116 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~--  188 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLTGNV--  188 (285)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT--
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCC--
Confidence            9999999999999998643  3356778999999999999999999999999764     368999999998887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                   +...|++||++++.+++.++.++++.|  |+||+|+||++.|++.....  ....+....+..++.+
T Consensus       189 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  253 (285)
T 2c07_A          189 -------------GQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGT  253 (285)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCC
Confidence                         367899999999999999999999989  99999999999999876542  1122222334456789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+++++++ ++...+++|+.+. ++|.
T Consensus       254 ~~dvA~~~~~l~-~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          254 PEEVANLACFLS-SDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHh-CCCcCCCCCCEEEeCCCc
Confidence            999999999999 5777889999887 5443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=8.7e-39  Score=278.18  Aligned_cols=229  Identities=19%  Similarity=0.180  Sum_probs=195.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999999999998888886443 56899999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.      .+++|+++|..+..+.|.      
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~~~~------  147 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSARLIPY------  147 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSCCTT------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhcccCCC------
Confidence            99999999998654  3356889999999999999999999999999553      679999999988876443      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                               ...|++||+++++|+++++.  ...|  |+||+|+||+++|++.......      ....++.+|+|+|++
T Consensus       148 ---------~~~Y~~sKaa~~~~~~~l~~--~~~~--i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~p~dva~~  208 (235)
T 3l77_A          148 ---------GGGYVSTKWAARALVRTFQI--ENPD--VRFFELRPGAVDTYFGGSKPGK------PKEKGYLKPDEIAEA  208 (235)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHH--HCTT--SEEEEEEECSBSSSTTTCCSCC------CGGGTCBCHHHHHHH
T ss_pred             ---------cchHHHHHHHHHHHHHHHhh--cCCC--eEEEEEeCCccccccccccCCc------ccccCCCCHHHHHHH
Confidence                     57899999999999999944  4667  9999999999999997765221      112246799999999


Q ss_pred             HHHHhcCCCccCCCcccccCCccc
Q 020927          266 TCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       266 i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      +++++ ++...+++|+.+..++..
T Consensus       209 v~~l~-~~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          209 VRCLL-KLPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             HHHHH-TSCTTCCCCEEEECCTTS
T ss_pred             HHHHH-cCCCCCccceEEEeeccc
Confidence            99999 678888999977755443

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-38  Score=288.09  Aligned_cols=224  Identities=22%  Similarity=0.253  Sum_probs=190.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|+++.++++++++++.+.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999999999999988888765  668999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.|++.+++.++|.|.++.    ..++||++||..+..+.|     
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~-----  176 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQG----TGGHIAFTASFAGLVPNA-----  176 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----SCEEEEEECCGGGTSCCT-----
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC----CCcEEEEeCchhhcCCCC-----
Confidence            9999999999998654  33677899999999999999999999999998751    257999999999998655     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH------------HHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG------------LVGLL  251 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~------------~~~~~  251 (319)
                                ++..|++||++++.|+++|+.++++.|  |+||+|+||+++|++.........            +....
T Consensus       177 ----------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (301)
T 3tjr_A          177 ----------GLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLP  244 (301)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHHHHHHC------------------
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccccccccchhhccccChhhhccccc
Confidence                      378999999999999999999999999  999999999999998764311100            00111


Q ss_pred             hhhhcCCHHHHHHHHHHHhcC
Q 020927          252 GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s  272 (319)
                      ......+|+++|+.++.++..
T Consensus       245 ~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          245 TQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             ----CCCHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHhc
Confidence            222356999999999999953

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=3.4e-39  Score=283.17  Aligned_cols=229  Identities=22%  Similarity=0.333  Sum_probs=188.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+++.++             .+..+.+|++++++++++++++
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999864322             1224889999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|  
T Consensus        76 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  148 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLWGIG--  148 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCCEEEEECCHhhccCCC--
Confidence            9999999999999998643  3456788999999999999999999999999864     368999999998887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                   +...|++||++++.|++.++.|+++.|  |+||+|+||+++|++.....  ....+....+..++.+
T Consensus       149 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~  213 (247)
T 1uzm_A          149 -------------NQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGT  213 (247)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBC
T ss_pred             -------------CChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcC
Confidence                         367899999999999999999999999  99999999999999865431  1111222234456789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      |+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       214 ~~dvA~~~~~l~-s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          214 PAEVAGVVSFLA-SEDASYISGAVIPVDGG  242 (247)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHc-CccccCCcCCEEEECCC
Confidence            999999999999 6888899999888 444

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=5.5e-39  Score=284.59  Aligned_cols=229  Identities=24%  Similarity=0.234  Sum_probs=193.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.             +.++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998643             34688999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~----  141 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-----RDPSIVNISSVQASIITK----  141 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-----CCcEEEEECCchhccCCC----
Confidence            99999999999998643  3356778999999999999999999999999764     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~  249 (319)
                                 +...|++||++++.|++.++.++++.   |+||+|+||+++|++.....             ....+..
T Consensus       142 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (264)
T 2dtx_A          142 -----------NASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGH  207 (264)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHh
Confidence                       36789999999999999999999864   99999999999999865321             1112222


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ..+..++.+|+|+|+.+++++ ++...+++|+.+. ++|...
T Consensus       208 ~~p~~~~~~p~dvA~~v~~l~-s~~~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          208 EHPMQRIGKPQEVASAVAFLA-SREASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             HSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-CchhcCCCCcEEEECCCccc
Confidence            335556789999999999999 6788899999888 555443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.4e-38  Score=279.43  Aligned_cols=242  Identities=24%  Similarity=0.292  Sum_probs=203.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999 888777777777654  55789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.|    
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~isS~~~~~~~~----  153 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----IKGTVINMSSVHEKIPWP----  153 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC----CCCEEEEeCCHHhcCCCC----
Confidence            99999999999998644  23567789999999999999999999999997641    157999999998887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~  258 (319)
                                 +...|++||++++.+++.++.++++.|  |++++|+||++.|++.....    ....+....+..++.+
T Consensus       154 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 1gee_A          154 -----------LFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGE  220 (261)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBC
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcC
Confidence                       367899999999999999999999988  99999999999999865431    1112222234455679


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCccccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQA  291 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~  291 (319)
                      |+|+|+.+++++ ++...+++|+.+. ++|....
T Consensus       221 ~~dva~~~~~l~-~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          221 PEEIAAVAAWLA-SSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHh-CccccCCCCcEEEEcCCcccC
Confidence            999999999999 5777899999887 5555443

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=3.1e-38  Score=277.54  Aligned_cols=239  Identities=26%  Similarity=0.301  Sum_probs=200.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCce-EEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV-QAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++ .++.+|+++++++++++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999999998877766655     3456 8899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+ ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|.
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~~  153 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-----GAGAIVNLGSMSGTIVNRP  153 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCSS
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCcEEEEEecchhccCCCC
Confidence            988 8899999999998644  3356678899999999999999999999999875     3689999999988865443


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYV  255 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~  255 (319)
                                   .+...|++||++++.+++.++.+++++|  |++++|+||++.|++.....    ....+....+..+
T Consensus       154 -------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (254)
T 2wsb_A          154 -------------QFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGR  218 (254)
T ss_dssp             -------------SCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSS
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhccccChHHHHHHHhcCCCCC
Confidence                         1237899999999999999999999988  99999999999999865331    1222333334455


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       219 ~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          219 CGEPSEIAAAALFLA-SPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCHHHHHHHHHHHh-CcccccccCCEEEECCCE
Confidence            779999999999999 5777889999887 5553

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-39  Score=281.98  Aligned_cols=231  Identities=22%  Similarity=0.260  Sum_probs=189.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||++++++|+++|++|++++|+++.+++.. +      -.++.++.+|++++++++++    .+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~------~~~~~~~~~D~~~~~~~~~~----~~   70 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K------YPGIQTRVLDVTKKKQIDQF----AN   70 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G------STTEEEEECCTTCHHHHHHH----HH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h------ccCceEEEeeCCCHHHHHHH----HH
Confidence            3578999999999999999999999999999999999987665432 1      12688999999999998844    44


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|+++     +.++||++||..+..+.|.   
T Consensus        71 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~---  142 (246)
T 2ag5_A           71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVKGVV---  142 (246)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTBCCT---
T ss_pred             HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCceEEEEechHhCcCCCC---
Confidence            57899999999998654  2356778999999999999999999999999764     3689999999988765431   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-------hHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-------FFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-------~~~~~~~~~~~~  254 (319)
                                 +...|++||++++.+++.++.+++++|  |+||+|+||++.|++.... .       ....+....+..
T Consensus       143 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (246)
T 2ag5_A          143 -----------NRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG  209 (246)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCC
Confidence                       367899999999999999999999999  9999999999999975431 0       111222233455


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       210 ~~~~~~dvA~~v~~l~-s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          210 RFATAEEIAMLCVYLA-SDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             SCEEHHHHHHHHHHHH-SGGGTTCCSCEEEECTTG
T ss_pred             CCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCc
Confidence            6779999999999999 6888899999888 5553

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.7e-38  Score=281.28  Aligned_cols=241  Identities=23%  Similarity=0.210  Sum_probs=185.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHH
Confidence            447789999999999999999999999999999999999998888877777654  557899999999999999999999


Q ss_pred             HhcC-CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSG-LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~-~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+.+ +++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.| 
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~-  159 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSAS-  159 (266)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC----------
T ss_pred             HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccchhccCCC-
Confidence            8888 899999999998643  3356778999999999999999999999999764     368999999998876543 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHhhhhc
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLGKYVI  256 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~  256 (319)
                                    +...|++||++++.+++.++.++++.|  |++++|+||++.|++.....   +...+....+..++
T Consensus       160 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  223 (266)
T 1xq1_A          160 --------------VGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRF  223 (266)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC-------------------------
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCC
Confidence                          367899999999999999999999989  99999999999999865431   11222233344566


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+|+|+|+.+++++ ++...+++|+.+..+|.
T Consensus       224 ~~~~dva~~~~~l~-~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          224 GEPEEVSSLVAFLC-MPAASYITGQTICVDGG  254 (266)
T ss_dssp             CCGGGGHHHHHHHT-SGGGTTCCSCEEECCCC
T ss_pred             cCHHHHHHHHHHHc-CccccCccCcEEEEcCC
Confidence            79999999999999 67788999998874443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.4e-38  Score=277.93  Aligned_cols=226  Identities=20%  Similarity=0.277  Sum_probs=183.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999998877766655     3478999999999999999999999999999


Q ss_pred             cEEEEccccCC---CCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          110 NILINNAGIMA---TPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       110 d~lv~nag~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |+||||||+..   +..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|        
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--------  142 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-----NHGHIINIGSTAGSWPYA--------  142 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCCT--------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCceEEEEccchhccCCC--------
Confidence            99999999863   23456788999999999999999999999999764     368999999999887544        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc-CCcccCc-h-hHHHHHHHHhhhhcCCHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT-TNLFRNI-S-FFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~-t~~~~~~-~-~~~~~~~~~~~~~~~~~~~va  263 (319)
                             +...|++||+++++|+++|+.|+++.|  |+||+|+||++. |++.... . ...............+|+|+|
T Consensus       143 -------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA  213 (248)
T 3asu_A          143 -------GGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVS  213 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC----------------------CCBCHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHH
Confidence                   367999999999999999999999999  999999999999 9985421 0 001111111222346899999


Q ss_pred             HHHHHHhcCCCccCCCccccc
Q 020927          264 ATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +.++|++. + ..+++|+.+.
T Consensus       214 ~~v~~l~s-~-~~~~~g~~i~  232 (248)
T 3asu_A          214 EAVWWVST-L-PAHVNINTLE  232 (248)
T ss_dssp             HHHHHHHH-S-CTTCCCCEEE
T ss_pred             HHHHHHhc-C-CccceeeEEE
Confidence            99999994 4 5678998776

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=8e-39  Score=290.90  Aligned_cols=253  Identities=20%  Similarity=0.245  Sum_probs=207.3

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE---------eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA---------VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA   93 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~---------~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   93 (319)
                      ..++++||++|||||++|||+++|++|+++|++|+++         +|+.+.++...+++...  +..   ..+|+++.+
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~   77 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVE   77 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGG
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHH
Confidence            3477899999999999999999999999999999996         45777788877777654  222   347999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           94 SVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        94 ~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +++++++++.+.++++|+||||||+...  ..+.+.++|+..+++|+.|++.+++.++|.|+++     ..++||++||.
T Consensus        78 ~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-----~~grIV~vsS~  152 (319)
T 1gz6_A           78 AGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASA  152 (319)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCh
Confidence            9999999999999999999999998754  2356789999999999999999999999999875     36899999999


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL  251 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~  251 (319)
                      .+..+.|               ++..|++||++++.|++.|++++++.|  |+||+|+||.+ |++..... ....    
T Consensus       153 ~~~~~~~---------------~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~~~-~~~~----  209 (319)
T 1gz6_A          153 SGIYGNF---------------GQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTETVM-PEDL----  209 (319)
T ss_dssp             HHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGGGS-CHHH----
T ss_pred             hhccCCC---------------CCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccccC-Chhh----
Confidence            8877544               367899999999999999999999999  99999999998 87754321 1111    


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc-------------cChhccCHHHHHHHHHHHHHHH
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ-------------ASSQAVNTELAQKLWDFSSDLI  312 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~  312 (319)
                        ....+|+++|+.++|++. + ..+++|+++. ++|...             ......+++.++++|+.+++++
T Consensus       210 --~~~~~p~dvA~~~~~l~s-~-~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~  280 (319)
T 1gz6_A          210 --VEALKPEYVAPLVLWLCH-E-SCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  280 (319)
T ss_dssp             --HHHSCGGGTHHHHHHHTS-T-TCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             --hccCCHHHHHHHHHHHhC-c-hhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhccc
Confidence              123589999999999994 4 4578999887 444321             1244578999999999998765

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.8e-38  Score=277.07  Aligned_cols=228  Identities=22%  Similarity=0.231  Sum_probs=191.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|++|||||++|||++++++|+++|++|++++|+.+..   .+++     +  +.++.+|+++ ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999997652   2222     2  7789999999 9999999999988999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.+        
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-----GWGRVLFIGSVTTFTAGG--------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECchhhccCCC--------
Confidence            9999999998643  3456788999999999999999999999999874     368999999999887531        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCCHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~v  262 (319)
                           ..+...|++||++++.|++.++.+++++|  |+||+|+||++.|++.....    ....+....+..++.+|+|+
T Consensus       138 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  210 (239)
T 2ekp_A          138 -----PVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEI  210 (239)
T ss_dssp             -----TSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHH
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHH
Confidence                 12467899999999999999999999999  99999999999999865321    11222223345567899999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+.+++++ ++...+++|+.+. ++|.
T Consensus       211 A~~~~~l~-s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          211 ARVAAVLC-GDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHc-CchhcCCCCCEEEECCCc
Confidence            99999999 6788899999888 5553

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.1e-38  Score=284.67  Aligned_cols=269  Identities=20%  Similarity=0.221  Sum_probs=214.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ....+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+++++++++++++
T Consensus        19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHH
Confidence            35567899999999999999999999999999999999999998888887776543 45789999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.    ...++||++||..+..+.| 
T Consensus        98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~-  172 (302)
T 1w6u_A           98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIYAETGSG-  172 (302)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTHHHHCCT-
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh----cCCCEEEEEcccccccCCC-
Confidence            99999999999999997543  2356778999999999999999999999999732    1367999999998887543 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC-cccCch----hHHHHHHHHhhh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN-LFRNIS----FFSGLVGLLGKY  254 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~-~~~~~~----~~~~~~~~~~~~  254 (319)
                                    +...|++||++++.+++.++.++++.|  |++++|+||++.|+ +.....    ....+....+..
T Consensus       173 --------------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~  236 (302)
T 1w6u_A          173 --------------FVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG  236 (302)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcC
Confidence                          367899999999999999999999999  99999999999997 433321    111223334455


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccccc--ChhccCHHHHHHHHHHHHHHHH
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQA--SSQAVNTELAQKLWDFSSDLIY  313 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  313 (319)
                      ++.+|+|+|+++++++ ++...+++|+.+. ++|....  .......+...+.|+++++++.
T Consensus       237 ~~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~  297 (302)
T 1w6u_A          237 RLGTVEELANLAAFLC-SDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIR  297 (302)
T ss_dssp             SCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC--
T ss_pred             CCCCHHHHHHHHHHHc-CCcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhcc
Confidence            6779999999999999 5777889999887 5554322  1122334556678888877654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.4e-40  Score=301.39  Aligned_cols=239  Identities=13%  Similarity=0.135  Sum_probs=194.7

Q ss_pred             CCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHH---------HHHHHHHHHhhC-CCCceEEEEcCCCCH--H
Q 020927           28 SGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAA---------CREVKKAIVKEI-PNAKVQAMELDLSSL--A   93 (319)
Q Consensus        28 ~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~---------~~~~~~~~~~~~-~~~~v~~~~~Dl~~~--~   93 (319)
                      ++|++|||||++  |||+++|++|+++|++|++++|++..         .+.....+.... ....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  99999999999999999988877522         111111111101 123478899999998  8


Q ss_pred             ------------------HHHHHHHHHHhcCCCccEEEEccccCC----CCcccCcccccchhhhhhhHHHHHHHHHHHH
Q 020927           94 ------------------SVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTNLLLET  151 (319)
Q Consensus        94 ------------------~v~~~~~~i~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  151 (319)
                                        +++++++++.++++++|+||||||+..    +..+.+.++|++++++|+.+++.+++.++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999742    2446788999999999999999999999999


Q ss_pred             HhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccc-cchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEee
Q 020927          152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS-AYGQSKLANVLHTSELARRLKE-DGVDITANSVH  229 (319)
Q Consensus       152 l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~  229 (319)
                      |++       .|+||++||..+..+.|.               +. .|++||+|+.+|+++|+.|+++ +|  |+||+|+
T Consensus       161 m~~-------~g~Iv~isS~~~~~~~~~---------------~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~v~  216 (329)
T 3lt0_A          161 MKP-------QSSIISLTYHASQKVVPG---------------YGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTIS  216 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSCCTT---------------CTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEE
T ss_pred             Hhh-------CCeEEEEeCccccCCCCc---------------chHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEEEe
Confidence            976       379999999999886554               54 8999999999999999999998 89  9999999


Q ss_pred             CCcccCCcccCchh-----------------------------------------------HHHHHHHHhhhhcCCHHHH
Q 020927          230 PGAITTNLFRNISF-----------------------------------------------FSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       230 PG~v~t~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~v  262 (319)
                      ||+++|+|......                                               ...+....+..++.+|+|+
T Consensus       217 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  296 (329)
T 3lt0_A          217 AGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDI  296 (329)
T ss_dssp             ECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHH
T ss_pred             cceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHH
Confidence            99999998765410                                               2233445566778899999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCccccc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNVAQA  291 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~~~~  291 (319)
                      |+.++||+ ++.+.++||+.|. |+|....
T Consensus       297 A~~v~fL~-s~~a~~itG~~i~vdGG~~~~  325 (329)
T 3lt0_A          297 GSVASFLL-SRESRAITGQTIYVDNGLNIM  325 (329)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHh-CchhccccCcEEEEcCCeeEE
Confidence            99999999 6899999999888 6665543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.4e-38  Score=278.76  Aligned_cols=226  Identities=16%  Similarity=0.179  Sum_probs=188.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-e--CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMA-V--RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~--r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+.+++..+++    .+.       |+.++++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~~-------~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PGT-------IALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TTE-------EECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CCC-------cccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988877665544    121       223777788999999999


Q ss_pred             CCCccEEEEccccCCC-----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          106 GLPLNILINNAGIMAT-----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       106 ~~~id~lv~nag~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++++|+||||||+...     ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|  
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-----~~g~iv~isS~~~~~~~~--  142 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-----GGASVIFITSSVGKKPLA--  142 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCGGGTSCCT--
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECChhhCCCCC--
Confidence            9999999999998643     3356778999999999999999999999999864     368999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc---cCc---hhHHHHHH-HHhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF---RNI---SFFSGLVG-LLGK  253 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~---~~~---~~~~~~~~-~~~~  253 (319)
                                   ++..|++||+++++|+++|+.|++++|  |+||+|+||+++|++.   ...   .....+.. ..+.
T Consensus       143 -------------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~  207 (244)
T 1zmo_A          143 -------------YNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL  207 (244)
T ss_dssp             -------------TCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC
Confidence                         367899999999999999999999999  9999999999999987   432   11222333 3455


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .++.+|+|+|+.+++++ ++...+++|+++. ++|.
T Consensus       208 ~r~~~pe~vA~~v~~l~-s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          208 GRLGRPDEMGALITFLA-SRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             CSCBCHHHHHHHHHHHH-TTTTGGGTTCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHc-CccccCccCCEEEeCCCC
Confidence            66789999999999999 6888999999888 5553

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-38  Score=282.98  Aligned_cols=231  Identities=23%  Similarity=0.231  Sum_probs=186.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+ |++|||||++|||++++++|+++|++|++++|+.+.++++.+++...   .++.++.+|++++++++++++++.+.
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            355 99999999999999999999999999999999998888777766432   47899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCC-eEEEeCCcccccCCCCCC
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEG-RIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~-~ii~isS~~~~~~~p~~~  181 (319)
                      ++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.+ +||++||..+..+.|   
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-----~~g~~IV~isS~~~~~~~~---  166 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-----GAGASIVNLGSVAGKWPYP---  166 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----CTTCEEEEECCGGGTSCCT---
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCcEEEEeCCchhccCCC---
Confidence            9999999999998542   3456788999999999999999999999999875     357 999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-hHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~  259 (319)
                                  +...|++||++++.|++.++.++++.|  |+||+|+||+++|++.... . ...............+|
T Consensus       167 ------------~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p  232 (272)
T 2nwq_A          167 ------------GSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQP  232 (272)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC--------------------CCCCBCH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCH
Confidence                        367899999999999999999999999  9999999999999986532 1 00111111122234689


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+|+.++|++. + ..+++|+.+.
T Consensus       233 edvA~~v~~l~s-~-~~~~~g~~i~  255 (272)
T 2nwq_A          233 EDIAETIFWIMN-Q-PAHLNINSLE  255 (272)
T ss_dssp             HHHHHHHHHHHT-S-CTTEEEEEEE
T ss_pred             HHHHHHHHHHhC-C-CccCccceEE
Confidence            999999999994 3 5678998776

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=7.4e-39  Score=277.89  Aligned_cols=222  Identities=18%  Similarity=0.146  Sum_probs=181.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+++     +.++.++.+|++++++++++++++.+.   +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999998887766554     567889999999999999999877543   3


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++      .++||++||..+..+.|         
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~~~---------  138 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQPKA---------  138 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTSCCT---------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCCCCC---------
Confidence            999999998654  3357789999999999999999999999999764      45999999999987644         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            +...|++||++++.|++.|+.+++++|  |+||+|+||+++|++.....      ...+..++.+|+|+|+.++
T Consensus       139 ------~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~dvA~~i~  204 (230)
T 3guy_A          139 ------QESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETSG------KSLDTSSFMSAEDAALMIH  204 (230)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC----------------------CCCHHHHHHHHH
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhcC------CCCCcccCCCHHHHHHHHH
Confidence                  368999999999999999999999999  99999999999999876542      2234556789999999999


Q ss_pred             HHhcCCCccCCCcccccCCcc
Q 020927          268 YVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       268 ~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +++.++...+++|+.+.+...
T Consensus       205 ~l~~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          205 GALANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             HHCCEETTEEEEEEEEEC---
T ss_pred             HHHhCcCCCCccceeecCCCC
Confidence            999778999999998885544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=7.3e-38  Score=275.20  Aligned_cols=239  Identities=25%  Similarity=0.310  Sum_probs=202.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  +.++.++.+|++++++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888777777654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +.++++|+||||||+... ..+.+.++|++.+++|+.+++.+++.++|.|.+.     ..++||++||..+..+.|    
T Consensus        84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~----  154 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNI----  154 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT----
T ss_pred             HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcchhhcCCCC----
Confidence            989999999999998654 2356778899999999999999999999999764     367999999998887543    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~  259 (319)
                                 +...|++||++++.+++.++.++++.|  |++++|+||++.|++....   .....+....+..++.+|
T Consensus       155 -----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T 1fmc_A          155 -----------NMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQP  221 (255)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCH
T ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCH
Confidence                       367899999999999999999999988  9999999999999876542   112223333344567799


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+|+.+++++ ++...+++|+.+..+|
T Consensus       222 ~dva~~~~~l~-~~~~~~~~G~~~~v~g  248 (255)
T 1fmc_A          222 QDIANAALFLC-SPAASWVSGQILTVSG  248 (255)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHh-CCccccCCCcEEEECC
Confidence            99999999999 5777889998777443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.1e-38  Score=275.00  Aligned_cols=237  Identities=25%  Similarity=0.266  Sum_probs=198.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++++++++++++.++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999999999999988887766652221 45789999999999999999999999999


Q ss_pred             CccEEEEccccCCC-----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          108 PLNILINNAGIMAT-----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       108 ~id~lv~nag~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|+||||||+...     ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +.++||++||..+..+.|    
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~----  150 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-----GAGVIVNIASVASLVAFP----  150 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT----
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEECChhhccCCC----
Confidence            99999999998643     2345678899999999999999999999999874     368999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-ch---hHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-IS---FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~~---~~~~~~~~~~~~~~~~  258 (319)
                                 +...|++||++++.+++.++.++++.|  |++++|+||++.|++... ..   +...+....+..++.+
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (250)
T 2cfc_A          151 -----------GRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGT  217 (250)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBC
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcC
Confidence                       367899999999999999999999988  999999999999998654 11   1122222234455679


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       218 ~~dva~~~~~l~-~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          218 AAQVADAVMFLA-GEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHHHHHH-STTCTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHc-CchhhcccCCEEEECCce
Confidence            999999999999 5777889999887 5443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.6e-38  Score=275.99  Aligned_cols=238  Identities=23%  Similarity=0.278  Sum_probs=185.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |++++|++|||||++|||++++++|+++|++|+++ .|+++..++..+.+...  +.++.++.+|++++++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 67777777777766554  5679999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|   
T Consensus        79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  150 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-----KSGKIINITSIAGIIGNA---  150 (247)
T ss_dssp             HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-----TCEEEEEECC-----------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCcEEEEEcChhhccCCC---
Confidence            989999999999998643  2356778899999999999999999999999764     368999999998776543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~  259 (319)
                                  +...|++||++++.+++.++.++++.|  |++|+|+||++.|++......  ...+....+..++.+|
T Consensus       151 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (247)
T 2hq1_A          151 ------------GQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTP  216 (247)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCH
T ss_pred             ------------CCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCH
Confidence                        367899999999999999999999999  999999999999997654321  1122222344557799


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+.+++++ ++...+++|+.+. ++|
T Consensus       217 ~dva~~~~~l~-~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          217 EEVANVVGFLA-SDDSNYITGQVINIDGG  244 (247)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHc-CcccccccCcEEEeCCC
Confidence            99999999999 5777889998777 444

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.5e-38  Score=274.32  Aligned_cols=235  Identities=26%  Similarity=0.310  Sum_probs=199.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..+...+++...  +.++.++.+|++++++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998 489988888777777655  55789999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|       
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~-------  146 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLIGNI-------  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCT-------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCEEEEECChhhcCCCC-------
Confidence            99999999998654  2356778899999999999999999999999764     368999999998877544       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~va  263 (319)
                              +...|++||++++.+++.++.++++.|  |++++|+||++.|++.....  ....+....+..++.+|+|+|
T Consensus       147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  216 (244)
T 1edo_A          147 --------GQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVA  216 (244)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHH
T ss_pred             --------CCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHH
Confidence                    367899999999999999999999989  99999999999999866542  112222223445567999999


Q ss_pred             HHHHHHhcCCCccCCCccccc-CCc
Q 020927          264 ATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +.+++++.++...+++|+.+. ++|
T Consensus       217 ~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          217 GLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             HHHHHHhCCCccCCcCCCEEEeCCC
Confidence            999999866788899999887 544

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.4e-39  Score=282.51  Aligned_cols=223  Identities=22%  Similarity=0.231  Sum_probs=187.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .++|++|||||++|||+++|++|++ .|++|++++|+++.            ....+.++.+|++++++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            4689999999999999999999999 78899999987531            13467899999999999999996554  


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+       .++||++||..+..+.|.    
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~----  136 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFIAKPN----  136 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTCCCTT----
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHccCCCC----
Confidence            6799999999998654  446788999999999999999999999999865       379999999999886553    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLVGL  250 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~  250 (319)
                                 ...|++||+++++|+++|+.|++++|  |+||+|+||+++|++.....             ........
T Consensus       137 -----------~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (244)
T 4e4y_A          137 -----------SFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE  203 (244)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc
Confidence                       67999999999999999999999999  99999999999999866431             11122233


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .+..++.+|+|+|+.++||+ ++...+++|+.+. |+|.
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~-s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLL-SDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCcCHHHHHHHHHHHh-cCccccccCCeEeECCCc
Confidence            45566789999999999999 6888999999888 5554

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.3e-37  Score=272.52  Aligned_cols=240  Identities=26%  Similarity=0.281  Sum_probs=202.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999999988887777765422 4578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|   
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~---  152 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-----RWGRIVNISSVVGFTGNV---  152 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-----TCEEEEEECCHHHHHCCT---
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-----CCcEEEEEccHHhcCCCC---
Confidence            999999999999998644  2356778899999999999999999999999764     367999999998876543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~  259 (319)
                                  +...|++||++++.+++.++.++++.|  |++++|+||++.|++......  ...+....+...+.+|
T Consensus       153 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (248)
T 2pnf_A          153 ------------GQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSP  218 (248)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCH
Confidence                        367899999999999999999999988  999999999999998764421  1122222344556799


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+.+++++ ++...+++|+.+. ++|
T Consensus       219 ~dva~~~~~l~-~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          219 EEVANVVLFLC-SELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHh-CchhhcCCCcEEEeCCC
Confidence            99999999999 5667889999777 444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=5.3e-38  Score=277.77  Aligned_cols=242  Identities=21%  Similarity=0.228  Sum_probs=195.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999987777666555     457899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCCC--c------ccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCccc
Q 020927          103 KSSGLPLNILINNAGIMATP--F------MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRH  173 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~--~------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~  173 (319)
                      .+.++++|+||||||+....  .      +.+.++|++.+++|+.+++.+++.++|.|.++... ..+.++||++||..+
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  160 (265)
T 2o23_A           81 KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA  160 (265)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence            99999999999999986442  1      25678899999999999999999999999764111 013689999999998


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHH
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLL  251 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~  251 (319)
                      ..+.|               +...|++||++++.+++.++.++++.|  |+||+|+||++.|++.....  ....+....
T Consensus       161 ~~~~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  223 (265)
T 2o23_A          161 FEGQV---------------GQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQV  223 (265)
T ss_dssp             HHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTC
T ss_pred             cCCCC---------------CCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccccCHHHHHHHHHcC
Confidence            87544               367899999999999999999999999  99999999999999876432  111222333


Q ss_pred             hh-hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          252 GK-YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       252 ~~-~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +. .++.+|+|+|+.+++++.   ..+++|+.+. ++|..
T Consensus       224 ~~~~~~~~~~dva~~~~~l~~---~~~~~G~~i~vdgG~~  260 (265)
T 2o23_A          224 PFPSRLGDPAEYAHLVQAIIE---NPFLNGEVIRLDGAIR  260 (265)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTCC
T ss_pred             CCcCCCCCHHHHHHHHHHHhh---cCccCceEEEECCCEe
Confidence            44 567799999999999984   4688999887 55543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-38  Score=276.65  Aligned_cols=249  Identities=24%  Similarity=0.269  Sum_probs=202.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+...+..+++.... +.++.++.+|++++++++++++++.
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999997665555555554433 4578999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.+.. 
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~~~-  162 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQ----QKGSIVVTSSMSSQIINQSS-  162 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTSCCEEE-
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcC----CCceEEEeCCchhhcccccc-
Confidence            999999999999998644  23567789999999999999999999999997641    24799999999887643210 


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (319)
                             ..+..+...|++||++++.+++.++.++++.|  |+|++|+||++.|++.....  ....+....+..++.+|
T Consensus       163 -------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (265)
T 1h5q_A          163 -------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQP  233 (265)
T ss_dssp             -------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCG
T ss_pred             -------ccccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCccccccccccchhHHHHHHhcCcccCCCCH
Confidence                   00122357899999999999999999999999  99999999999999876541  12223333445567899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       234 ~dva~~~~~l~-~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          234 EEMTGQAILLL-SDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             GGGHHHHHHHH-SGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHhhc-cCchhcCcCcEEEecCCE
Confidence            99999999999 5777889999777 5553

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2e-37  Score=276.42  Aligned_cols=243  Identities=19%  Similarity=0.145  Sum_probs=201.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+...  +.++.++.+|+++++++++++++
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHH
Confidence            3446799999999999999999999999999999999999887666666665544  56789999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC---Cc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          102 FKSSGLPLNILINNAGIMAT---PF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~---~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.+.++++|+||||||+...   .. +.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.
T Consensus       105 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~  179 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-----GKGSLIITSSISGKIVN  179 (279)
T ss_dssp             HHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCCTTSCC-
T ss_pred             HHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCeEEEECchHhccCC
Confidence            99989999999999998643   22 45668899999999999999999999999864     36899999999877641


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhh
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYV  255 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~  255 (319)
                      +             ..+...|++||++++.+++.++.++++.+   +||+|+||+++|++.....  ....+....+..+
T Consensus       180 ~-------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~---~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~  243 (279)
T 3ctm_A          180 I-------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA---RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGR  243 (279)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC---EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCS
T ss_pred             C-------------CCCcccHHHHHHHHHHHHHHHHHHhcccC---CEEEEeccCCccccccccChHHHHHHHHhCCccC
Confidence            0             12367899999999999999999998765   8999999999999875431  2222333445566


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       244 ~~~~~dvA~~~~~l~-s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          244 EGLTQELVGGYLYLA-SNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             CBCGGGTHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHh-CccccCccCCEEEECCCe
Confidence            789999999999999 6778899999887 4443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-37  Score=279.93  Aligned_cols=244  Identities=23%  Similarity=0.296  Sum_probs=201.2

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---CCCceEEEEcCCCCHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI---PNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ....++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++....   .+.++.++.+|++++++++++
T Consensus        11 ~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           11 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             cCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            34557899999999999999999999999999999999999998888888876532   255799999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++++.+.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|.+.+.     ..++||++||.. ..+
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~-~~~  164 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVPT-KAG  164 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCCC-TTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-----cCCeEEEEEeec-ccC
Confidence            99999999999999999997543  2356778899999999999999999999965443     267999999988 543


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc-cCch-----hHHHHHHH
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF-RNIS-----FFSGLVGL  250 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~-~~~~-----~~~~~~~~  250 (319)
                      .|               ....|+++|+++.++++.++.++++.|  |+||+|+||++.|++. ....     ....+...
T Consensus       165 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  227 (303)
T 1yxm_A          165 FP---------------LAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK  227 (303)
T ss_dssp             CT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG
T ss_pred             CC---------------cchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccchhhhhccccchHHHHHHHhc
Confidence            33               367899999999999999999999988  9999999999999952 2211     11112222


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .+..++.+|+|+|+.+++++ ++...+++|+++. ++|..
T Consensus       228 ~p~~~~~~~~dvA~~i~~l~-~~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          228 IPAKRIGVPEEVSSVVCFLL-SPAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             STTSSCBCTHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CcccCCCCHHHHHHHHHHHh-CcccccCCCcEEEECCCee
Confidence            34456779999999999999 6778899999888 55543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=6.2e-37  Score=272.74  Aligned_cols=241  Identities=22%  Similarity=0.236  Sum_probs=199.4

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+.+++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++..   ..++.++.+|+++++++++++++
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHH
Confidence            445678999999999999999999999999999999999998877666555521   23799999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          102 FKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +.+.++++|+||||||+...    ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~  160 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFTAG  160 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTCCC
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCeEEEEeeccccCCC
Confidence            99999999999999998642    2356678999999999999999999999999864     36899999999988754


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----hHHHHHHHH-
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----FFSGLVGLL-  251 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~-  251 (319)
                      |.              +...|++||++++.+++.++.++++.|  |++++|+||++.|++.....     ....+.... 
T Consensus       161 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  224 (278)
T 2bgk_A          161 EG--------------VSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA  224 (278)
T ss_dssp             TT--------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC
T ss_pred             CC--------------CCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhhcccchhHHHHhhhccc
Confidence            41              357899999999999999999999999  99999999999999866431     111222211 


Q ss_pred             -hhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          252 -GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       252 -~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                       +..++.+|+|+|+.+++++ ++...+++|+.+..+|
T Consensus       225 ~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~g  260 (278)
T 2bgk_A          225 NLKGTLLRAEDVADAVAYLA-GDESKYVSGLNLVIDG  260 (278)
T ss_dssp             SSCSCCCCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             ccccccCCHHHHHHHHHHHc-CcccccCCCCEEEECC
Confidence             2344679999999999999 5777889999887444

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.4e-37  Score=281.24  Aligned_cols=234  Identities=21%  Similarity=0.180  Sum_probs=189.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.+++||+||||||++|||+++|++|+++|++|++++|+.+.++++.+.+....++.++.++.+|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999999999888877555589999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccc-cCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTAR-ESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.|++++++.++|.|.++.. ..++.|+||++||.++..+.|. 
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~-  161 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS-  161 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS-
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC-
Confidence            999999999999998644  345677899999999999999999999999976311 1124789999999999986553 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH------------
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV------------  248 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~------------  248 (319)
                                    +..|++||+|+++|++.|+.++++.|  |+|++|+||+|+|++...........            
T Consensus       162 --------------~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  225 (319)
T 3ioy_A          162 --------------PGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAV  225 (319)
T ss_dssp             --------------SHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC--------------------------
T ss_pred             --------------CHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCcccccccCchhhcccccchhHHHH
Confidence                          67899999999999999999999999  99999999999999876542111110            


Q ss_pred             HHHh-h-hhcCCHHHHHHHHHHHhcCCC
Q 020927          249 GLLG-K-YVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       249 ~~~~-~-~~~~~~~~va~~i~~l~~s~~  274 (319)
                      .... . ....+|+++|+.++.++..+.
T Consensus       226 ~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          226 ERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             ---CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            0110 0 112689999999999986544

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.4e-38  Score=275.99  Aligned_cols=242  Identities=24%  Similarity=0.285  Sum_probs=195.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-----CCCceEEEEcCCCCHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-----PNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+....     +..++.++.+|+++++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999999988777666554321     1257899999999999999999


Q ss_pred             HHHHhcCCCc-cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          100 SEFKSSGLPL-NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       100 ~~i~~~~~~i-d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      +++.+.++++ |+||||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++.    ..++||++||..+..+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNG----CRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCTHHHHC
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC----CCceEEEECChhhccC
Confidence            9999989998 999999998654  23567789999999999999999999999997641    1579999999988875


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKY  254 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~  254 (319)
                      .|               +...|++||++++.+++.++.++++.|  |++++|+||++.|++.....  ....+....+..
T Consensus       159 ~~---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  221 (264)
T 2pd6_A          159 NV---------------GQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMG  221 (264)
T ss_dssp             CT---------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC----------CTGGGCTTC
T ss_pred             CC---------------CChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhhcCHHHHHHHHHhCCCC
Confidence            44               368899999999999999999999999  99999999999999865431  111111222334


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       222 ~~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          222 HLGDPEDVADVVAFLA-SEDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             CCCCHHHHHHHHHHHc-CCcccCCCCCEEEECCCc
Confidence            5679999999999999 5677889999887 4443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.7e-37  Score=271.06  Aligned_cols=237  Identities=25%  Similarity=0.242  Sum_probs=198.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+..   ..++.++.+|++++++++++++++.+.
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999887776665532   257899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCC-CeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKE-GRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~-~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.     +. ++||++||..+..+.|    
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~~iv~isS~~~~~~~~----  150 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK-----GLGASIINMSSIEGFVGDP----  150 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-----SSCEEEEEECCGGGTSCCT----
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-----CCCCEEEEeCCchhccCCC----
Confidence            9999999999998643  3356778999999999999999999999999764     23 7999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCchhHHH---HHHHHhhhhcC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNISFFSG---LVGLLGKYVIK  257 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~  257 (319)
                                 +...|++||++++.+++.++.++.  +.|  |++++|+||++.|++.........   +....+..++.
T Consensus       151 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (251)
T 1zk4_A          151 -----------SLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIG  217 (251)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCB
T ss_pred             -----------CCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCc
Confidence                       367899999999999999999998  778  999999999999998765421111   11122344567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+|+.+++++ ++...+++|+.+. ++|.
T Consensus       218 ~~~dva~~~~~l~-~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          218 EPNDIAYICVYLA-SNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHc-CcccccccCcEEEECCCc
Confidence            9999999999999 5777889999887 4443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=4.3e-38  Score=277.17  Aligned_cols=230  Identities=17%  Similarity=0.173  Sum_probs=190.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+ +...  +.++..+     ++++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999887776655 5444  3345443     6667888999998889999


Q ss_pred             cEEEEccccC-CC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          110 NILINNAGIM-AT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       110 d~lv~nag~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |+||||||+. ..  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|        
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--------  140 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFGPWK--------  140 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTSCCT--------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEECCcccccCCC--------
Confidence            9999999986 32  3456788999999999999999999999999864     368999999999887544        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc---------cCCcccCch-hHHHHHHHHhhhhc
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI---------TTNLFRNIS-FFSGLVGLLGKYVI  256 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v---------~t~~~~~~~-~~~~~~~~~~~~~~  256 (319)
                             ++..|++||+++++|++.++.+++++|  |+||+|+||++         +|++..... ....+....+..++
T Consensus       141 -------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~  211 (254)
T 1zmt_A          141 -------ELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRL  211 (254)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSC
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCC
Confidence                   367899999999999999999999999  99999999999         887755432 12223333455567


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      .+|+|+|+.+++++ ++...+++|+++. ++|...
T Consensus       212 ~~p~dvA~~v~~l~-s~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          212 GTQKELGELVAFLA-SGSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             BCHHHHHHHHHHHH-TTSCGGGTTCEEEESTTCCC
T ss_pred             cCHHHHHHHHHHHh-CcccCCccCCEEEECCCchh
Confidence            89999999999999 6788899999888 556443

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=8.2e-38  Score=296.54  Aligned_cols=238  Identities=26%  Similarity=0.265  Sum_probs=192.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ....++||++|||||++|||+++|++|+++|++|++++|+... +...+.....    .+.++.+|+++.++++++++++
T Consensus       207 ~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHH
Confidence            3455789999999999999999999999999999999997532 2222222221    3568999999999999999999


Q ss_pred             HhcCCC-ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLP-LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~-id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+++++ +|+||||||+...  ..+.+.++|+..+++|+.+++++.+.++|.|.++     +.++||++||.++..+.| 
T Consensus       282 ~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-----~~g~iV~iSS~a~~~g~~-  355 (454)
T 3u0b_A          282 TEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-----EGGRVIGLSSMAGIAGNR-  355 (454)
T ss_dssp             HHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-----TTCEEEEECCHHHHHCCT-
T ss_pred             HHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----CCCEEEEEeChHhCCCCC-
Confidence            998876 9999999998755  3467889999999999999999999999998763     478999999999998655 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH--HHHHHHHhhhhcC
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF--SGLVGLLGKYVIK  257 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~  257 (319)
                                    ++..|++||+++++|+++++.+++++|  |+||+|+||+++|+|.......  .......+..+..
T Consensus       356 --------------g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g  419 (454)
T 3u0b_A          356 --------------GQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGG  419 (454)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC----------CHHHHHSBTTSSCB
T ss_pred             --------------CCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCC
Confidence                          478999999999999999999999999  9999999999999997765322  1122223445567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      +|+|+|+.++||+ ++.+.++||+.|..+|.
T Consensus       420 ~pedvA~~v~fL~-s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          420 QPVDVAELIAYFA-SPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             CHHHHHHHHHHHH-CGGGTTCCSCEEEESSS
T ss_pred             CHHHHHHHHHHHh-CCccCCCCCcEEEECCc
Confidence            9999999999999 68999999999885543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-37  Score=272.79  Aligned_cols=233  Identities=25%  Similarity=0.291  Sum_probs=192.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            67999999999999999999999999999999999998887777777554334578999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +++|+||||||+.      +.++|++.+++|+.+++.+++.++|.|.+...  .+.++||++||..+..+.|        
T Consensus        85 g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~--------  148 (267)
T 2gdz_A           85 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLMPVA--------  148 (267)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCCCEEEEeCCccccCCCC--------
Confidence            9999999999974      24679999999999999999999999976421  1257999999999887544        


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHH--HHHhccCCCcEEEEEeeCCcccCCcccCchh----------HHHHHHHHhhh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSEL--ARRLKEDGVDITANSVHPGAITTNLFRNISF----------FSGLVGLLGKY  254 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~l--a~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~  254 (319)
                             +...|++||++++.+++++  +.++++.|  |+||+|+||++.|++......          ...+....+..
T Consensus       149 -------~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (267)
T 2gdz_A          149 -------QQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY  219 (267)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccc
Confidence                   3678999999999999985  68899999  999999999999997553210          01112233444


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      .+.+|+|+|+.+++++. +.  .++|+.+..++
T Consensus       220 ~~~~~~dvA~~v~~l~s-~~--~~~G~~~~v~g  249 (267)
T 2gdz_A          220 GILDPPLIANGLITLIE-DD--ALNGAIMKITT  249 (267)
T ss_dssp             CCBCHHHHHHHHHHHHH-CT--TCSSCEEEEET
T ss_pred             cCCCHHHHHHHHHHHhc-Cc--CCCCcEEEecC
Confidence            46799999999999994 43  48999887443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-37  Score=268.48  Aligned_cols=229  Identities=21%  Similarity=0.253  Sum_probs=197.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.++...+++...  +.++.++.+|++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHH
Confidence            478999999999999999999999999       9999999998888877777544  5679999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927          101 EFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      ++.+.++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~  153 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATKAFR  153 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-----CCCEEEEEecchhcCCCC
Confidence            999999999999999998643  2356778999999999999999999999999764     368999999999887544


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCC
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (319)
                                     +...|++||++++.|++.++.++++.|  |++++|+||++.|++........       ..++.+
T Consensus       154 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~  209 (244)
T 2bd0_A          154 ---------------HSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDEM-------QALMMM  209 (244)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCSTT-------GGGSBC
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhccccc-------cccCCC
Confidence                           367899999999999999999999999  99999999999999876542111       235679


Q ss_pred             HHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      |+|+|+.+++++ ++...+++|+.+...+.
T Consensus       210 ~~dva~~~~~l~-~~~~~~~~g~~~~~~~~  238 (244)
T 2bd0_A          210 PEDIAAPVVQAY-LQPSRTVVEEIILRPTS  238 (244)
T ss_dssp             HHHHHHHHHHHH-TSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHHH-hCCccccchheEEeccc
Confidence            999999999999 57788889987774443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.9e-37  Score=284.56  Aligned_cols=256  Identities=12%  Similarity=0.059  Sum_probs=205.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHH------------HHHHHHHhhCCCCceEEEEcCCCC
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACR------------EVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      ..-.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+.+...  +.++..+.+|+++
T Consensus        43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFS  120 (405)
T ss_dssp             CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTS
T ss_pred             cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCC
Confidence            446789999999999999999999999 9999999988654321            122333333  5678999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccC---------------CCC---------------------cccCcccccchhh
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIM---------------ATP---------------------FMLSKDNIELQFA  135 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~---------------~~~---------------------~~~~~~~~~~~~~  135 (319)
                      +++++++++++.+++|++|+||||||+.               .+.                     .+.+.++|+.+++
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~  200 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVA  200 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHH
Confidence            9999999999999999999999999974               111                     3457789999999


Q ss_pred             hhhhHHH-HHHHHHHHH-HhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc--ccchhhHHHHHHHHHH
Q 020927          136 TNHIGHF-LLTNLLLET-MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF--SAYGQSKLANVLHTSE  211 (319)
Q Consensus       136 vn~~~~~-~l~~~~~~~-l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~  211 (319)
                      +|..+.| .+++++++. |..      +.|+||++||.++..+.|.               +  ..|++||+++++++++
T Consensus       201 Vn~~~~~~~~~~~~~~~~m~~------~gG~IVniSSi~~~~~~p~---------------~~~~aY~AaKaal~~ltrs  259 (405)
T 3zu3_A          201 VMGGEDWQMWIDALLDAGVLA------EGAQTTAFTYLGEKITHDI---------------YWNGSIGAAKKDLDQKVLA  259 (405)
T ss_dssp             HHSSHHHHHHHHHHHHHTCEE------EEEEEEEEECCCCGGGTTT---------------TTTSHHHHHHHHHHHHHHH
T ss_pred             hhchhHHHHHHHHHHHHhhhh------CCcEEEEEeCchhhCcCCC---------------ccchHHHHHHHHHHHHHHH
Confidence            9999998 778887754 443      2589999999999876553               4  7899999999999999


Q ss_pred             HHHHhccC-CCcEEEEEeeCCcccCCcccCchhHHHHHH--HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccc--cCC
Q 020927          212 LARRLKED-GVDITANSVHPGAITTNLFRNISFFSGLVG--LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYF--ADS  286 (319)
Q Consensus       212 la~~~~~~-g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~--~~~  286 (319)
                      |+.|+++. |  ||||+|+||++.|++...++.......  .-+..+..+||++++++.+|++ +   +++|..+  +..
T Consensus       260 LA~Ela~~~G--IRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~s-d---~l~~~~~~~D~~  333 (405)
T 3zu3_A          260 IRESLAAHGG--GDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYK-D---SLCGDSPHMDQE  333 (405)
T ss_dssp             HHHHHHTTTS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH-H---TTSSSCCCBCTT
T ss_pred             HHHHhCcccC--eEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHh-c---cccCCCCCcCCC
Confidence            99999999 9  999999999999998776643222111  1245556799999999999994 4   6667654  455


Q ss_pred             cccccChhccCHHHHHHHHHHHH
Q 020927          287 NVAQASSQAVNTELAQKLWDFSS  309 (319)
Q Consensus       287 g~~~~~~~~~~~~~~~~~~~~~~  309 (319)
                      +...+++|+.++++|+++-+.-+
T Consensus       334 ~~~r~d~~e~~~~~q~~~~~~~~  356 (405)
T 3zu3_A          334 GRLRADYKELDPEVQNQVQQLWD  356 (405)
T ss_dssp             SCEECCHHHHCHHHHHHHHHHHH
T ss_pred             cCCCCchhhcCHHHHHHHHHHHH
Confidence            78899999999988886655444

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.9e-37  Score=272.92  Aligned_cols=243  Identities=20%  Similarity=0.241  Sum_probs=199.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+ ++.+++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998 77777777777654  56799999999999999999999999


Q ss_pred             cCCCccEEEEcccc-CCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-CCCCC
Q 020927          105 SGLPLNILINNAGI-MAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-SYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~-~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~~p~~  180 (319)
                      .++++|+||||||+ ...  ..+.+.+.|+..+++|+.+++.+++.++|.|.+........++||++||..+.. +.|  
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP--  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT--
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC--
Confidence            99999999999997 322  235667889999999999999999999999976421011237999999998876 433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~  258 (319)
                                   +...|++||++++.+++.++.++++.|  |++|+|+||++.|++.....  ....+....+..++.+
T Consensus       160 -------------~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T 3afn_B          160 -------------GAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGT  224 (258)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBC
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCC
Confidence                         367899999999999999999999989  99999999999999876531  1122222234455779


Q ss_pred             HHHHHHHHHHHhcCCCcc-CCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVK-GLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~-~~~G~~~~-~~g~  288 (319)
                      |+|+|+.+++++ ++... +++|+.+. ++|.
T Consensus       225 ~~dva~~~~~l~-~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          225 AEEMAPAFLFFA-SHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GGGTHHHHHHHH-CHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHHHh-CcchhccccCCEEeECCCc
Confidence            999999999999 45555 88999777 5443

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=6.2e-37  Score=267.65  Aligned_cols=235  Identities=24%  Similarity=0.284  Sum_probs=197.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEE-EEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQA-MELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~-~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...  +.++.+ +.+|++++++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            5799999999999999999999999999998 89988888777777654  445666 8999999999999999999989


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.|      
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~------  147 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-----RFGRIVNITSVVGILGNP------  147 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCS------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-----CCCEEEEEeChhhccCCC------
Confidence            999999999998644  2356778999999999999999999999999864     368999999998877544      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~v  262 (319)
                               +...|++||++++.+++.++.++.+.|  |++++|+||++.|++.....  ....+....+..++.+|+|+
T Consensus       148 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  216 (245)
T 2ph3_A          148 ---------GQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEV  216 (245)
T ss_dssp             ---------SBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHH
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHH
Confidence                     367899999999999999999999988  99999999999999865432  12222233344556799999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+.+++++ ++...+++|+++. ++|.
T Consensus       217 a~~~~~l~-~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          217 AEAVAFLV-SEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHHHHT-SGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHh-CcccccccCCEEEECCCC
Confidence            99999999 5666789999877 5543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.1e-36  Score=264.42  Aligned_cols=232  Identities=22%  Similarity=0.261  Sum_probs=190.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++      ..+.++.+|++++++++++++   
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHH---
Confidence            36789999999999999999999999999999999999987776554432      135677999999999988876   


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                       .++++|+||||||+...  ..+.+.+.|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.|   
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~---  144 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG----VPGAIVNVSSQCSQRAVT---  144 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTSCCT---
T ss_pred             -HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC----CCcEEEEeCchhhccCCC---
Confidence             56789999999997643  23566788999999999999999999999997641    157999999998887543   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                  +...|++||++++.+++.++.++++.|  |++++|+||++.|++....    .....+....+..++.
T Consensus       145 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (244)
T 3d3w_A          145 ------------NHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFA  210 (244)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCB
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCc
Confidence                        367899999999999999999999988  9999999999999985421    1122333334555678


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      +|+|+|+.+++++ ++...+++|+.+. ++|
T Consensus       211 ~~~dva~~~~~l~-~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          211 EVEHVVNAILFLL-SDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHc-CccccCCCCCEEEECCC
Confidence            9999999999999 5667789999777 444

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-37  Score=272.24  Aligned_cols=240  Identities=23%  Similarity=0.264  Sum_probs=198.3

Q ss_pred             ccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           20 EVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        20 ~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      +....+++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...  +.++.++.+|++++++++++
T Consensus        12 ~~~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           12 PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH
Confidence            333456789999999999999999999999999999999999 887777777777654  56789999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc-c
Q 020927           99 ASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-F  175 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~-~  175 (319)
                      ++++.+.++++|+||||||+...  ..+.+.+.|++.+++|+.+++++++.+++.|++       .++||++||..+. .
T Consensus        90 ~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~  162 (274)
T 1ja9_A           90 FDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT  162 (274)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccC
Confidence            99999999999999999998643  235677889999999999999999999999863       3799999999887 5


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC------------ch-
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN------------IS-  242 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~------------~~-  242 (319)
                      +.|               +...|++||++++.+++.++.+++..|  |++++|+||.+.|++...            .. 
T Consensus       163 ~~~---------------~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  225 (274)
T 1ja9_A          163 GIP---------------NHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQ  225 (274)
T ss_dssp             SCC---------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCH
T ss_pred             CCC---------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchhcccccccccccccCch
Confidence            433               367899999999999999999999988  999999999999987651            11 


Q ss_pred             --hHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          243 --FFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       243 --~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                        ....+....+...+.+|+|+|+.+++++ ++...+++|+.+..+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~dva~~i~~l~-~~~~~~~~G~~~~v~  270 (274)
T 1ja9_A          226 EKIDEGLANMNPLKRIGYPADIGRAVSALC-QEESEWINGQVIKLT  270 (274)
T ss_dssp             HHHHHHHHHTSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEES
T ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHHHHh-CcccccccCcEEEec
Confidence              1111222234455679999999999999 566778899977733

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=7.4e-37  Score=273.02  Aligned_cols=222  Identities=27%  Similarity=0.285  Sum_probs=184.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+     +.++.++.+|++++++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999988776655433     45799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|    
T Consensus        76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~----  146 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-----GSGSVVNISSFGGQLSFA----  146 (281)
T ss_dssp             HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCT----
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEEcCccccCCCC----
Confidence            99999999999998543  3356788999999999999999999999999875     368999999999887644    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------h-hHH------HH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------S-FFS------GL  247 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~-~~~------~~  247 (319)
                                 +...|++||++++.+++.++.++++.|  |+||+|+||++.|++....        . +..      ..
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (281)
T 3m1a_A          147 -----------GFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL  213 (281)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH
Confidence                       468999999999999999999999999  9999999999999985432        1 111      11


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCC
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ....+..++.+|+|+|+++++++..+
T Consensus       214 ~~~~~~~~~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          214 VQGSDGSQPGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             HHC-----CBCHHHHHHHHHHHHHSS
T ss_pred             HhhccCCCCCCHHHHHHHHHHHHhCC
Confidence            11223445679999999999999543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.8e-38  Score=289.97  Aligned_cols=256  Identities=14%  Similarity=0.069  Sum_probs=203.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHH------------HHHHHHHhhCCCCceEEEEcCCCC
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACR------------EVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      +.-.+|++|||||++|||+++|+.|++ .|++|++++|+.+..+            .+.+.+...  +.++..+.+|+++
T Consensus        57 ~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd  134 (422)
T 3s8m_A           57 RNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFS  134 (422)
T ss_dssp             CSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTS
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCC
Confidence            334699999999999999999999999 9999999998765432            122344443  6678999999999


Q ss_pred             HHHHHHHHHHHHhcC-CCccEEEEccccC---------------CCC---------------------cccCcccccchh
Q 020927           92 LASVRKFASEFKSSG-LPLNILINNAGIM---------------ATP---------------------FMLSKDNIELQF  134 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~-~~id~lv~nag~~---------------~~~---------------------~~~~~~~~~~~~  134 (319)
                      +++++++++++.+++ |++|+||||||+.               .+.                     .+.+.++|+.++
T Consensus       135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v  214 (422)
T 3s8m_A          135 DAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTI  214 (422)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHH
Confidence            999999999999999 9999999999972               111                     135678899999


Q ss_pred             hhhhhHHH-HHHHHHHHH-HhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc--ccchhhHHHHHHHHH
Q 020927          135 ATNHIGHF-LLTNLLLET-MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF--SAYGQSKLANVLHTS  210 (319)
Q Consensus       135 ~vn~~~~~-~l~~~~~~~-l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~  210 (319)
                      ++|..+.| .+++.+++. |..      +.|+||++||.++..+.|.               +  ..|++||+++.+|++
T Consensus       215 ~Vn~~~~~~~~~~a~~~~~m~~------~gG~IVniSSi~g~~~~p~---------------~~~~aY~ASKaAl~~lTr  273 (422)
T 3s8m_A          215 TVMGGQDWELWIDALEGAGVLA------DGARSVAFSYIGTEITWPI---------------YWHGALGKAKVDLDRTAQ  273 (422)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEE------EEEEEEEEEECCCGGGHHH---------------HTSHHHHHHHHHHHHHHH
T ss_pred             HhhchhHHHHHHHHHHHHHHhh------CCCEEEEEeCchhhccCCC---------------ccchHHHHHHHHHHHHHH
Confidence            99999998 778887764 433      2589999999998875442               4  789999999999999


Q ss_pred             HHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH--HHhhhhcCCHHHHHHHHHHHhcCCCccCCC-ccc--ccC
Q 020927          211 ELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG--LLGKYVIKNVEQGAATTCYVALHPHVKGLT-GSY--FAD  285 (319)
Q Consensus       211 ~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~i~~l~~s~~~~~~~-G~~--~~~  285 (319)
                      +|+.|+++.|  ||||+|+||++.|++...++.......  ..+..+..+||++|+++.+|++ +.. +.+ |+.  +++
T Consensus       274 sLA~Ela~~G--IRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~s-d~l-y~~~~~~~~~d~  349 (422)
T 3s8m_A          274 RLNARLAKHG--GGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFR-ERL-YRQDGQPAEVDE  349 (422)
T ss_dssp             HHHHHHHTTT--CEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-HTT-TCTTCCCCCCCT
T ss_pred             HHHHHhCccC--EEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhc-chh-hccCCCCcccCC
Confidence            9999999999  999999999999999877643332221  2245667899999999999994 543 333 553  457


Q ss_pred             CcccccChhccCHHHHHHHHHH
Q 020927          286 SNVAQASSQAVNTELAQKLWDF  307 (319)
Q Consensus       286 ~g~~~~~~~~~~~~~~~~~~~~  307 (319)
                      .+...+++|+.++++|+++-+.
T Consensus       350 ~~~~r~d~~e~~~~~q~~~~~~  371 (422)
T 3s8m_A          350 QNRLRLDDWELRDDVQDACKAL  371 (422)
T ss_dssp             TSCEESCTTTTSHHHHHHHHHH
T ss_pred             CCCCccchhhCCHHHHHHHHHH
Confidence            7888999999999988866553

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=3.8e-37  Score=270.94  Aligned_cols=233  Identities=24%  Similarity=0.268  Sum_probs=188.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i  102 (319)
                      |+++||++|||||++|||++++++|+++|++ |++++|+.+.  +..+++....++.++.++.+|++++ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4688999999999999999999999999996 9999998632  2334444444456899999999998 9999999999


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .+.++++|+||||||+.      +.++|++.+++|+.+++.+++.++|.|.++.  ....++||++||.++..+.|    
T Consensus        79 ~~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~----  146 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFNAIH----  146 (254)
T ss_dssp             HHHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCT----
T ss_pred             HHhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhc--CCCCCEEEEECchhhccCCC----
Confidence            99999999999999973      4578999999999999999999999997641  01257999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~  258 (319)
                                 ++..|++||++++.|++.++.++.+.|  |+||+|+||+++|++......    ............+.+
T Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (254)
T 1sby_A          147 -----------QVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQT  213 (254)
T ss_dssp             -----------TSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEE
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCC
Confidence                       367899999999999999999998888  999999999999998654310    111122222233458


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+.+++++.    .+++|+.+. ++|.
T Consensus       214 ~~dvA~~i~~~~~----~~~~G~~~~v~gG~  240 (254)
T 1sby_A          214 SEQCGQNFVKAIE----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHHH----HCCTTCEEEEETTE
T ss_pred             HHHHHHHHHHHHH----cCCCCCEEEEeCCc
Confidence            9999999999983    467899877 5553

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-36  Score=273.50  Aligned_cols=238  Identities=27%  Similarity=0.354  Sum_probs=190.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~  103 (319)
                      ..+++|+||||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++++ ++++++++++.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999998888887653 45799999999998 99999999999


Q ss_pred             hcCCCccEEEEccccCCC--------------------------------CcccCcccccchhhhhhhHHHHHHHHHHHH
Q 020927          104 SSGLPLNILINNAGIMAT--------------------------------PFMLSKDNIELQFATNHIGHFLLTNLLLET  151 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--------------------------------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  151 (319)
                      +.++++|+||||||+...                                ..+.+.+++++.+++|+.|++.+++.++|.
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999998642                                123467889999999999999999999999


Q ss_pred             HhcccccCCCCCeEEEeCCcccccCCCCCCc--------------------------C-cCCCCCCCC-CccccchhhHH
Q 020927          152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIR--------------------------F-DRINDQSGY-NRFSAYGQSKL  203 (319)
Q Consensus       152 l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~--------------------------~-~~~~~~~~~-~~~~~Y~~sK~  203 (319)
                      |+++     +.++||++||..+..+.+....                          + .......++ .+...|++||+
T Consensus       167 l~~~-----~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          167 LQLS-----DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HTTS-----SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hccC-----CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            9764     4689999999998764321100                          0 001111122 24568999999


Q ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccc
Q 020927          204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYF  283 (319)
Q Consensus       204 a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~  283 (319)
                      ++++|++.|++++.+    |+||+|+||+|.|++.....             ..+|+++++.+++++..+. ...+|.++
T Consensus       242 a~~~~~~~la~e~~~----i~v~~v~PG~v~T~~~~~~~-------------~~~~~~~a~~~~~~~~~~~-~~~~g~~~  303 (311)
T 3o26_A          242 CLNAYTRVLANKIPK----FQVNCVCPGLVKTEMNYGIG-------------NYTAEEGAEHVVRIALFPD-DGPSGFFY  303 (311)
T ss_dssp             HHHHHHHHHHHHCTT----SEEEEECCCSBCSGGGTTCC-------------SBCHHHHHHHHHHHHTCCS-SCCCSCEE
T ss_pred             HHHHHHHHHHhhcCC----ceEEEecCCceecCCcCCCC-------------CCCHHHHHHHHHHHHhCCC-CCCCceEe
Confidence            999999999999853    99999999999999876542             2489999999999986554 44567766


Q ss_pred             cCC
Q 020927          284 ADS  286 (319)
Q Consensus       284 ~~~  286 (319)
                      ...
T Consensus       304 ~~s  306 (311)
T 3o26_A          304 DCS  306 (311)
T ss_dssp             TC-
T ss_pred             ccc
Confidence            543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=271.23  Aligned_cols=241  Identities=22%  Similarity=0.238  Sum_probs=195.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.......++.++.+|++++++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999988888887776543467899999999999999999999998


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++..   .+.++||++||..+....|     
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~---~~~g~iv~isS~~~~~~~~-----  180 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLP-----  180 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCS-----
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCCceEEEEcChhhcccCC-----
Confidence            9999999999997644  33567789999999999999999999999998641   0137999999998873211     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCc-h-hHHHHHHHHhhhhcCCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNI-S-FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~  259 (319)
                              ..+...|++||++++.|++.++.+++  ..|  |++|+|+||++.|++.... . .........+..++.+|
T Consensus       181 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (279)
T 1xg5_A          181 --------LSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKP  250 (279)
T ss_dssp             --------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCH
Confidence                    22467899999999999999999998  777  9999999999999984221 1 11222223334456799


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccC
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      +|+|+.+++++. +.....+|++..+
T Consensus       251 ~dvA~~i~~l~~-~~~~~~~g~i~i~  275 (279)
T 1xg5_A          251 EDVAEAVIYVLS-TPAHIQIGDIQMR  275 (279)
T ss_dssp             HHHHHHHHHHHH-SCTTEEEEEEEEE
T ss_pred             HHHHHHHHHHhc-CCcceEeeeEEEc
Confidence            999999999994 5566677775543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-37  Score=267.81  Aligned_cols=227  Identities=20%  Similarity=0.213  Sum_probs=184.0

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ....++||++|||||++|||++++++|+++|++|++++|+++..++    +     + ++.++ +|+  .++++++++++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~-----~-~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S-----G-HRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T-----C-SEEEE-CCT--TTCHHHHHHHS
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh----h-----C-CeEEE-eeH--HHHHHHHHHHh
Confidence            4466899999999999999999999999999999999999743221    1     2 56777 999  55677777765


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .    ++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|+++     +.++||++||..+..+.|  
T Consensus        80 ~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~--  148 (249)
T 1o5i_A           80 K----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISPIE--  148 (249)
T ss_dssp             C----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT--
T ss_pred             c----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCcEEEEEcchHhcCCCC--
Confidence            3    89999999997644  3356778999999999999999999999999875     368999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHH-HHHHHHhhhhcC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFS-GLVGLLGKYVIK  257 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~-~~~~~~~~~~~~  257 (319)
                                   +...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....  ... .+....+..++.
T Consensus       149 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~  213 (249)
T 1o5i_A          149 -------------NLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMA  213 (249)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCB
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCc
Confidence                         368899999999999999999999999  99999999999999864321  111 222234455677


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +|+|+|+.+++++ ++...+++|+.+. ++|..
T Consensus       214 ~~~dvA~~i~~l~-s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          214 KPEEIASVVAFLC-SEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHc-CccccCCCCCEEEECCCcc
Confidence            9999999999999 6778899999887 55543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.6e-38  Score=286.29  Aligned_cols=241  Identities=17%  Similarity=0.157  Sum_probs=186.7

Q ss_pred             CCCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHH------HH-HHHHHHHhhCCCC---ceEEEEcCC--
Q 020927           24 GIDGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAA------CR-EVKKAIVKEIPNA---KVQAMELDL--   89 (319)
Q Consensus        24 ~~~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~------~~-~~~~~~~~~~~~~---~v~~~~~Dl--   89 (319)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|++..      .. ...+.+.....+.   .+.++.+|+  
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            36689999999999  8999999999999999999999987421      10 0111121111111   124444443  


Q ss_pred             ----------C--------CHHHHHHHHHHHHhcCCCccEEEEccccCC----CCcccCcccccchhhhhhhHHHHHHHH
Q 020927           90 ----------S--------SLASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTNL  147 (319)
Q Consensus        90 ----------~--------~~~~v~~~~~~i~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~  147 (319)
                                +        ++++++++++++.++++++|+||||||+..    +..+.+.++|++.+++|+.+++.+++.
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      3        356899999999999999999999999753    234677899999999999999999999


Q ss_pred             HHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-CCCcEEE
Q 020927          148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF-SAYGQSKLANVLHTSELARRLKE-DGVDITA  225 (319)
Q Consensus       148 ~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v  225 (319)
                      ++|+|++       .|+||++||.++..+.|+               + ..|++||+++++|+++|+.|+++ +|  |+|
T Consensus       164 ~~~~m~~-------~g~Iv~isS~~~~~~~~~---------------~~~~Y~asKaal~~l~~~la~el~~~~g--Irv  219 (315)
T 2o2s_A          164 FGPIMNE-------GGSAVTLSYLAAERVVPG---------------YGGGMSSAKAALESDTRTLAWEAGQKYG--VRV  219 (315)
T ss_dssp             HSTTEEE-------EEEEEEEEEGGGTSCCTT---------------CCTTHHHHHHHHHHHHHHHHHHHHHHTC--CEE
T ss_pred             HHHHHhc-------CCEEEEEecccccccCCC---------------ccHHHHHHHHHHHHHHHHHHHHhCcccC--eEE
Confidence            9999964       479999999998875443               4 47999999999999999999985 88  999


Q ss_pred             EEeeCCcccCCcccCch------hHHH----HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          226 NSVHPGAITTNLFRNIS------FFSG----LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       226 ~~v~PG~v~t~~~~~~~------~~~~----~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+||+++|++.....      +...    +....+..++.+|+|+|+.++||+ ++.+.++||+++. ++|..
T Consensus       220 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~-s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          220 NAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLL-SPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             EEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             EEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh-CchhccCcCCEEEECCCee
Confidence            99999999999754321      1111    122345566789999999999999 6888999999888 55544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.5e-37  Score=267.03  Aligned_cols=210  Identities=21%  Similarity=0.213  Sum_probs=177.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+                      +|++++++++++++++ 
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~-   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI-   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH-
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh-
Confidence            35788999999999999999999999999999999999864                      8999999999998865 


Q ss_pred             hcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                         +++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|++       .|+||++||..+..+.|  
T Consensus        58 ---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~--  125 (223)
T 3uce_A           58 ---GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRKVVA--  125 (223)
T ss_dssp             ---CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTSCCT--
T ss_pred             ---CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhccCCC--
Confidence               789999999998632   346778999999999999999999999999865       57999999999887644  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh------HHHHHHHHhhh
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF------FSGLVGLLGKY  254 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~  254 (319)
                                   +...|++||++++.|+++|+.|+++    |+||+|+||+++|++......      ...+....+..
T Consensus       126 -------------~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  188 (223)
T 3uce_A          126 -------------NTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG  188 (223)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTC
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCC
Confidence                         3689999999999999999999986    999999999999998776521      22233445667


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+++++++.   ..+++|+.+. ++|.
T Consensus       189 ~~~~~~dvA~~~~~l~~---~~~~tG~~i~vdgG~  220 (223)
T 3uce_A          189 KVGEASDIAMAYLFAIQ---NSYMTGTVIDVDGGA  220 (223)
T ss_dssp             SCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTG
T ss_pred             CccCHHHHHHHHHHHcc---CCCCCCcEEEecCCe
Confidence            77899999999999994   4789999888 4443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3.5e-36  Score=261.48  Aligned_cols=224  Identities=21%  Similarity=0.244  Sum_probs=181.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +.++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++      .++.++.+|++++++++++++++.+.
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEA   75 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999988776655433      26888999999999999999999998


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++.     +.++||++||..+..+.|     
T Consensus        76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~-----  145 (234)
T 2ehd_A           76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-----GGGTIVNVGSLAGKNPFK-----  145 (234)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCTTTTSCCT-----
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-----CCcEEEEECCchhcCCCC-----
Confidence            9999999999997643  3356778999999999999999999999999864     368999999998876543     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                                +...|+++|++++.+++.++.++++.|  |++++|+||++.|++.....  ..    .   ...+|+|+|
T Consensus       146 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~--~~----~---~~~~~~dvA  204 (234)
T 2ehd_A          146 ----------GGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGNTP--GQ----A---WKLKPEDVA  204 (234)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC-------------------------CCHHHHH
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCcccccc--cc----c---CCCCHHHHH
Confidence                      367899999999999999999999999  99999999999999865431  11    0   135899999


Q ss_pred             HHHHHHhcCCCccCCCcccccCCc
Q 020927          264 ATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.+++++ ++...+++|+.+...+
T Consensus       205 ~~~~~l~-~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          205 QAVLFAL-EMPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHHH-HSCCSSCCCEEECCC-
T ss_pred             HHHHHHh-CCCcccccceEEEeec
Confidence            9999999 5777889998766544

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=9.1e-38  Score=284.09  Aligned_cols=241  Identities=15%  Similarity=0.171  Sum_probs=161.1

Q ss_pred             CCCCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCH-----------HHHH-----------HHHHHHHhhCCC
Q 020927           24 GIDGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNM-----------AACR-----------EVKKAIVKEIPN   79 (319)
Q Consensus        24 ~~~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~-----------~~~~-----------~~~~~~~~~~~~   79 (319)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|++           +.++           ++.+++......
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            35689999999999  89999999999999999999998753           1121           112222221100


Q ss_pred             -CceEEEEcC--CCC------------------HHHHHHHHHHHHhcCCCccEEEEccccCC----CCcccCcccccchh
Q 020927           80 -AKVQAMELD--LSS------------------LASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQF  134 (319)
Q Consensus        80 -~~v~~~~~D--l~~------------------~~~v~~~~~~i~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~  134 (319)
                       ....++.+|  +++                  +++++++++++.++++++|+||||||+..    +..+.+.++|++.+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence             012444444  333                  44899999999999999999999999753    23467789999999


Q ss_pred             hhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc-ccchhhHHHHHHHHHHHH
Q 020927          135 ATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF-SAYGQSKLANVLHTSELA  213 (319)
Q Consensus       135 ~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la  213 (319)
                      ++|+.+++.+++.++|+|++       .|+||++||..+..+.|.               + ..|++||+++++|+++|+
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~~~~---------------~~~~Y~asKaal~~l~~~la  221 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKE-------GGSALALSYIASEKVIPG---------------YGGGMSSAKAALESDCRTLA  221 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE-------EEEEEEEEECC---------------------------------THHHHHHHH
T ss_pred             hHhhHHHHHHHHHHHHHHhc-------CceEEEEeccccccccCc---------------cchhhHHHHHHHHHHHHHHH
Confidence            99999999999999999965       379999999998875443               4 589999999999999999


Q ss_pred             HHhcc-CCCcEEEEEeeCCcccCCcccCchh------HHH----HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccc
Q 020927          214 RRLKE-DGVDITANSVHPGAITTNLFRNISF------FSG----LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSY  282 (319)
Q Consensus       214 ~~~~~-~g~~i~v~~v~PG~v~t~~~~~~~~------~~~----~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~  282 (319)
                      .|+++ +|  |+||+|+||+++|++......      ...    +....+..++.+|+|+|+.++||+ ++.+.++||++
T Consensus       222 ~el~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~-s~~~~~itG~~  298 (319)
T 2ptg_A          222 FEAGRARA--VRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLL-SPLARAVTGAT  298 (319)
T ss_dssp             HHHHHHHC--CEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHT-SGGGTTCCSCE
T ss_pred             HHhccccC--eeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHh-CcccCCccCCE
Confidence            99985 78  999999999999998654321      011    122345567789999999999999 68889999998


Q ss_pred             cc-CCccc
Q 020927          283 FA-DSNVA  289 (319)
Q Consensus       283 ~~-~~g~~  289 (319)
                      +. ++|..
T Consensus       299 i~vdGG~~  306 (319)
T 2ptg_A          299 LYVDNGLH  306 (319)
T ss_dssp             EEESTTCT
T ss_pred             EEECCCce
Confidence            88 55543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.1e-36  Score=298.24  Aligned_cols=226  Identities=22%  Similarity=0.252  Sum_probs=185.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++||++|||||++|||+++|++|+++|++|++++|..  ++++.+++...  +.++..+.+|++  ++++++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            578999999999999999999999999999999998632  34455555543  557788888984  456788888888


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|+||||||+...  ..+.+.++|+..+++|+.|++.++++++|+|+++     +.|+||++||.++..+.|+   
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IVnisS~ag~~~~~~---  463 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-----QFGRIINITSTSGIYGNFG---  463 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCHHHHSCCTT---
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECChhhccCCCC---
Confidence            89999999999998644  3467889999999999999999999999999864     4789999999999876553   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                  +..|++||+|+.+|+++|+.|++++|  |+||+|+||. .|+|..... ..    .  .....+|+++
T Consensus       464 ------------~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~~~-~~----~--~~~~~~pe~v  521 (604)
T 2et6_A          464 ------------QANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLSIM-RE----Q--DKNLYHADQV  521 (604)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC----------------CCSSCGGGT
T ss_pred             ------------ChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccccC-ch----h--hccCCCHHHH
Confidence                        68999999999999999999999999  9999999996 999865321 00    0  1123589999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+.++||+ ++.+. +||+++. ++|.
T Consensus       522 A~~v~~L~-s~~~~-itG~~~~vdGG~  546 (604)
T 2et6_A          522 APLLVYLG-TDDVP-VTGETFEIGGGW  546 (604)
T ss_dssp             HHHHHHTT-STTCC-CCSCEEEEETTE
T ss_pred             HHHHHHHh-CCccC-CCCcEEEECCCe
Confidence            99999999 67777 9999888 5554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-36  Score=297.44  Aligned_cols=227  Identities=24%  Similarity=0.257  Sum_probs=189.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH---------HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM---------AACREVKKAIVKEIPNAKVQAMELDLSSLASV   95 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   95 (319)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++...  +.++   .+|+++.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            568999999999999999999999999999999998765         5667777777654  3333   3588888889


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +++++++.+++|++|+||||||+...  ..+.+.++|++++++|+.|++.++++++|+|+++     +.|+||++||.++
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-----~~G~IVnisS~ag  153 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-----KYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-----CCCEEEEECCHHH
Confidence            99999999999999999999998643  4467889999999999999999999999999875     3789999999999


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      ..+.|+               +..|++||+|+.+|+++|+.|++++|  |+||+|+|| +.|+|...... ..      .
T Consensus       154 ~~~~~~---------------~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~~~~-~~------~  208 (604)
T 2et6_A          154 LYGNFG---------------QANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTESIMP-PP------M  208 (604)
T ss_dssp             HHCCTT---------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHTTSC-HH------H
T ss_pred             cCCCCC---------------chHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccccCC-hh------h
Confidence            886553               68999999999999999999999999  999999998 68877543210 11      1


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ....+|+++|..++||+ ++. .++||+.+. ++|.
T Consensus       209 ~~~~~pe~vA~~v~~L~-s~~-~~itG~~~~vdgG~  242 (604)
T 2et6_A          209 LEKLGPEKVAPLVLYLS-SAE-NELTGQFFEVAAGF  242 (604)
T ss_dssp             HTTCSHHHHHHHHHHHT-SSS-CCCCSCEEEEETTE
T ss_pred             hccCCHHHHHHHHHHHh-CCc-ccCCCCEEEECCCe
Confidence            12358999999999999 566 899999888 5553

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4.3e-37  Score=270.34  Aligned_cols=221  Identities=13%  Similarity=0.084  Sum_probs=184.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +..+..+|++|||||++|||+++|++|+++|++|++++|+.+..              .-..+.+|+++.++++++++++
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHH
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHH
Confidence            34556689999999999999999999999999999999987532              1236789999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .++++++|+||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|++       .|+||++||..+..+.| 
T Consensus        82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~-  153 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALNRTS-  153 (251)
T ss_dssp             HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT-
T ss_pred             HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhccCCC-
Confidence            9999999999999998654   234567889999999999999999999999865       47999999999987644 


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcC
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK  257 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  257 (319)
                                    +...|++||++++.|++.++.+++  +.|  |+||+|+||+++|++....      ....+..++.
T Consensus       154 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~  211 (251)
T 3orf_A          154 --------------GMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRKY------MSDANFDDWT  211 (251)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHHH------CTTSCGGGSB
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhhh------cccccccccC
Confidence                          468999999999999999999987  778  9999999999999875432      1112345567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+|+|+++++++..+...+++|+.+...+
T Consensus       212 ~~~dva~~i~~l~~~~~~~~~tG~~i~v~~  241 (251)
T 3orf_A          212 PLSEVAEKLFEWSTNSDSRPTNGSLVKFET  241 (251)
T ss_dssp             CHHHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             CHHHHHHHHHHHhcCccccCCcceEEEEec
Confidence            999999999999954388999999887443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.7e-37  Score=279.40  Aligned_cols=241  Identities=16%  Similarity=0.167  Sum_probs=186.4

Q ss_pred             CCCCCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHHHHhhCCC---CceEEEEcC---
Q 020927           24 GIDGSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACR-------EVKKAIVKEIPN---AKVQAMELD---   88 (319)
Q Consensus        24 ~~~l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~-------~~~~~~~~~~~~---~~v~~~~~D---   88 (319)
                      .|+++||++|||||+  +|||+++|++|+++|++|++++|++..-.       ...+.+.....+   .....+.+|   
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            467899999999999  99999999999999999999998642110       000011000001   112344443   


Q ss_pred             -----CC------------CHHHHHHHHHHHHhcCCCccEEEEccccCC----CCcccCcccccchhhhhhhHHHHHHHH
Q 020927           89 -----LS------------SLASVRKFASEFKSSGLPLNILINNAGIMA----TPFMLSKDNIELQFATNHIGHFLLTNL  147 (319)
Q Consensus        89 -----l~------------~~~~v~~~~~~i~~~~~~id~lv~nag~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~  147 (319)
                           ++            ++++++++++++.++++++|+||||||+..    +..+.+.++|++.+++|+.+++.+++.
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 32            266899999999999999999999999743    234677889999999999999999999


Q ss_pred             HHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-CCCcEEE
Q 020927          148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF-SAYGQSKLANVLHTSELARRLKE-DGVDITA  225 (319)
Q Consensus       148 ~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v  225 (319)
                      ++|+|++       .++||++||..+..+.|.               + ..|++||+++++|+++|+.|+++ +|  |+|
T Consensus       163 ~~~~m~~-------~g~iv~isS~~~~~~~~~---------------~~~~Y~asKaa~~~~~~~la~e~~~~~g--i~v  218 (297)
T 1d7o_A          163 FLPIMNP-------GGASISLTYIASERIIPG---------------YGGGMSSAKAALESDTRVLAFEAGRKQN--IRV  218 (297)
T ss_dssp             HGGGEEE-------EEEEEEEECGGGTSCCTT---------------CTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEE
T ss_pred             HHHHhcc-------CceEEEEeccccccCCCC---------------cchHHHHHHHHHHHHHHHHHHHhCcccC--cEE
Confidence            9999964       479999999998875443               4 58999999999999999999985 78  999


Q ss_pred             EEeeCCcccCCcccCchhHHH----HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          226 NSVHPGAITTNLFRNISFFSG----LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       226 ~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+||+++|++.........    +....+..++.+|+|+|+.++||+ ++.+.+++|+++. ++|..
T Consensus       219 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~-s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          219 NTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLV-SPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             EEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             EEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHh-CccccCCCCCEEEECCCce
Confidence            999999999999775422222    222345556789999999999999 6888999999888 55543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-35  Score=259.93  Aligned_cols=232  Identities=25%  Similarity=0.350  Sum_probs=190.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++      ..+.++.+|++++++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHH----
Confidence            5688999999999999999999999999999999999987766554331      245677999999999988876    


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++.    ..++||++||..+..+.|    
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~----~~~~iv~~sS~~~~~~~~----  144 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRG----VPGSIVNVSSMVAHVTFP----  144 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT----CCEEEEEECCGGGTSCCT----
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC----CCeEEEEEcchhhcCCCC----
Confidence            56789999999997643  33567788999999999999999999999997641    157999999998887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  258 (319)
                                 +...|++||++++.+++.++.+++..|  |++++|+||++.|++....    .+...+....+...+.+
T Consensus       145 -----------~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (244)
T 1cyd_A          145 -----------NLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAE  211 (244)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBC
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCC
Confidence                       367899999999999999999999988  9999999999999875421    11123333344456779


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+++++++ ++...+++|+.+. ++|.
T Consensus       212 ~~dva~~~~~l~-~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          212 VEDVVNSILFLL-SDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSSEEEESTTG
T ss_pred             HHHHHHHHHHHh-CchhhcccCCEEEECCCc
Confidence            999999999999 5777889999877 5553

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.2e-37  Score=270.05  Aligned_cols=228  Identities=17%  Similarity=0.136  Sum_probs=161.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+++||++|||||++|||+++|++|++ |++|++++|+.+.++...+       ..++.++.+|+++.++ .+.+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHH
Confidence            568899999999999999999999988 9999999999887765433       2358899999999877 455555566


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++.      .++||++||..+..+.|    
T Consensus        72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~----  141 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNGPHP----  141 (245)
T ss_dssp             TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC-------------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCcccccCCC----
Confidence            78899999999998654  2345778999999999999999999999999774      58999999999988654    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                 +...|++||++++.|+++|+.++++.|  |+||+|+||++.|++.....  .......+..++.+|+|+
T Consensus       142 -----------~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~p~dv  206 (245)
T 3e9n_A          142 -----------GNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGLM--DSQGTNFRPEIYIEPKEI  206 (245)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC------------------CCGGGSCHHHH
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhhh--hhhhcccccccCCCHHHH
Confidence                       368899999999999999999999999  99999999999999876542  222223445567899999


Q ss_pred             HHHHHHHhcCCCccCCCcccccCC
Q 020927          263 AATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      |+++++++..+....+.+..+.+.
T Consensus       207 A~~i~~l~~~~~~~~~~~i~~~p~  230 (245)
T 3e9n_A          207 ANAIRFVIDAGETTQITNVDVRPR  230 (245)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEEC
T ss_pred             HHHHHHHHcCCCccceeeeEEEec
Confidence            999999996444333333333343

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.7e-36  Score=265.52  Aligned_cols=238  Identities=28%  Similarity=0.380  Sum_probs=193.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+.+...  +.++.++.+|+++.++++++++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 9999999999998888888877665  567899999999999999999999999


Q ss_pred             CCCccEEEEccccCCCCc-ccC-cccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC----
Q 020927          106 GLPLNILINNAGIMATPF-MLS-KDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE----  179 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~-~~~-~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~----  179 (319)
                      ++++|+||||||+..... ..+ .++++..+++|+.+++++++.++|.|.+       .++||++||..+..+.+.    
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChh
Confidence            999999999999865432 222 4788999999999999999999998864       469999999887642110    


Q ss_pred             --------CCcCc---------------CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc----CCCcEEEEEeeCCc
Q 020927          180 --------GIRFD---------------RINDQSGYNRFSAYGQSKLANVLHTSELARRLKE----DGVDITANSVHPGA  232 (319)
Q Consensus       180 --------~~~~~---------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~g~~i~v~~v~PG~  232 (319)
                              .+..+               +.....++ +...|++||++++.|++.++.++++    .|  |+|++|+||+
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~  229 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW-PSSAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGW  229 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTC-CSCHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCC-ccchhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCc
Confidence                    00000               00000111 2378999999999999999999988    67  9999999999


Q ss_pred             ccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCcccccCCccc
Q 020927          233 ITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFADSNVA  289 (319)
Q Consensus       233 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~~~g~~  289 (319)
                      +.|++...             ....+|+++|+.+++++.++. ..+++|+++.+++..
T Consensus       230 v~t~~~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~  274 (276)
T 1wma_A          230 VRTDMAGP-------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE  274 (276)
T ss_dssp             BCSTTTCT-------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEE
T ss_pred             cccCcCCc-------------cccCChhHhhhhHhhhhcCcccccccCceEeccCcee
Confidence            99998653             135699999999999996453 468999999876643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=3.2e-37  Score=269.50  Aligned_cols=218  Identities=15%  Similarity=0.071  Sum_probs=184.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .++|++|||||++|||++++++|+++|++|++++|+++..+            ....++.+|++++++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999999875321            246778999999999999999999888


Q ss_pred             --CCccEEEEccccCCC--C-cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          107 --LPLNILINNAGIMAT--P-FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       107 --~~id~lv~nag~~~~--~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                        +++|+||||||+...  . .+.+.++|++.+++|+.+++.+++.++|.|++       .++||++||..+..+.|   
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~---  142 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTP---  142 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT---
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHccCCC---
Confidence              799999999998643  2 34567889999999999999999999999964       47999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                  +...|++||++++.|++.++.+++  +.|  |+||+|+||+++|++........      ......+|
T Consensus       143 ------------~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~  202 (241)
T 1dhr_A          143 ------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMPEA------DFSSWTPL  202 (241)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHSTTS------CGGGSEEH
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCccccccCcch------hhccCCCH
Confidence                        368899999999999999999999  888  99999999999999754321000      11234579


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+|+.+++++ ++...+++|+++..+|
T Consensus       203 ~~vA~~v~~l~-~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          203 EFLVETFHDWI-TGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             HHHHHHHHHHH-TTTTCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHh-cCCCcCccceEEEEeC
Confidence            99999999999 6888999999888444

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-35  Score=269.37  Aligned_cols=191  Identities=25%  Similarity=0.301  Sum_probs=160.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-----MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-----~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      |+|++|++|||||++|||+++|++|+++|++|++++|+     .+.++.+.+.+...  +.++.++.+|+++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHH
Confidence            46789999999999999999999999999999987765     55666666665554  567999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          100 SEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++.+++|++|+||||||+...  ..+.+.++|++.+++|+.|++.++++++|+|+++     +.|+||++||.++....
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-----~~g~iV~isS~~~~~~~  153 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-----KHGLLIWISSSSSAGGT  153 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCC
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEecchhccCC
Confidence            9999999999999999998643  3467889999999999999999999999999875     47899999999988532


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF  238 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~  238 (319)
                      +              .+...|++||+++++|+++++.|+++.|  |+||+|+||++.|++.
T Consensus       154 ~--------------~~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          154 P--------------PYLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTN  198 (324)
T ss_dssp             C--------------SSCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC-----
T ss_pred             C--------------CcchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCch
Confidence            1              2357899999999999999999999999  9999999999997653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-36  Score=260.60  Aligned_cols=232  Identities=25%  Similarity=0.270  Sum_probs=182.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+    . .+.++.++.+|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  999999999877654322    1 256899999999999999999999998


Q ss_pred             cCC--CccEEEEccccCC-C--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcc------cccCCCCCeEEEeCCccc
Q 020927          105 SGL--PLNILINNAGIMA-T--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKT------ARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~~~--~id~lv~nag~~~-~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~------~~~~~~~~~ii~isS~~~  173 (319)
                      .++  ++|+||||||+.. .  ..+.+.+++++.+++|+.+++.+++.++|.|.+.      .......++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            888  8999999999865 2  2356678899999999999999999999999764      101111689999999988


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      ..+.+..        .....+...|++||++++.+++.++.++++.|  |++++|+||+++|++....            
T Consensus       156 ~~~~~~~--------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~------------  213 (250)
T 1yo6_A          156 SITDNTS--------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN------------  213 (250)
T ss_dssp             CSTTCCS--------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------
T ss_pred             ccCCccc--------ccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCCC------------
Confidence            7653210        00113467899999999999999999999988  9999999999999986431            


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                       ...+|+++|+.+++++ ++....++|+++..+|
T Consensus       214 -~~~~~~~~a~~~~~~~-~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          214 -AALTVEQSTAELISSF-NKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ------HHHHHHHHHHH-TTCCGGGTTCEEETTE
T ss_pred             -CCCCHHHHHHHHHHHH-hcccccCCCeEEEECC
Confidence             2368999999999999 4666778999988444

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9e-37  Score=265.76  Aligned_cols=219  Identities=14%  Similarity=0.039  Sum_probs=183.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+            ....++.+|++++++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999875421            246778999999999999999999888


Q ss_pred             --CCccEEEEccccCCC--C-cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          107 --LPLNILINNAGIMAT--P-FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       107 --~~id~lv~nag~~~~--~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                        +++|+||||||+...  . .+.+.++|++.+++|+.+++.+++.++|.|.+       .++||++||..+..+.|   
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~---  138 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTP---  138 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCT---
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhccCCC---
Confidence              799999999997643  2 34567889999999999999999999999964       46999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                  +...|++||++++.|+++++.+++  +.|  |+||+|+||+++|++.......      .......+|
T Consensus       139 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~  198 (236)
T 1ooe_A          139 ------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNRKWMPN------ADHSSWTPL  198 (236)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHHHHSTT------CCGGGCBCH
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchhhcCCC------ccccccCCH
Confidence                        368899999999999999999998  888  9999999999999975432000      011234689


Q ss_pred             HHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +|+|+.+++++.++...+++|+++..+|
T Consensus       199 ~dvA~~i~~~l~s~~~~~~~G~~~~v~g  226 (236)
T 1ooe_A          199 SFISEHLLKWTTETSSRPSSGALLKITT  226 (236)
T ss_dssp             HHHHHHHHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHcCCCcccccccEEEEec
Confidence            9999999966657889999999888443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-35  Score=263.21  Aligned_cols=217  Identities=27%  Similarity=0.286  Sum_probs=187.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++++++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888887777665  5579999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.++++|+||||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.++     +.++||++||..+..+.|   
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~~~---  175 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHVSVP---  175 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CCCHH---
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-----CCCEEEEEechhhcCCCC---
Confidence            999999999999998654  2345678899999999999999999999999764     368999999998876433   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK---EDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  258 (319)
                                  +...|++||++++.+++.++.+++   +.|  |+|++|+||+++|++....        ..+...+.+
T Consensus       176 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~~~--------~~~~~~~~~  233 (272)
T 1yb1_A          176 ------------FLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNP--------STSLGPTLE  233 (272)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCT--------HHHHCCCCC
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccccc--------cccccCCCC
Confidence                        367899999999999999999997   567  9999999999999986531        112345679


Q ss_pred             HHHHHHHHHHHhcC
Q 020927          259 VEQGAATTCYVALH  272 (319)
Q Consensus       259 ~~~va~~i~~l~~s  272 (319)
                      |+|+|+.+++++..
T Consensus       234 ~~dva~~i~~~~~~  247 (272)
T 1yb1_A          234 PEEVVNRLMHGILT  247 (272)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999999953

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=5.1e-36  Score=294.36  Aligned_cols=251  Identities=23%  Similarity=0.244  Sum_probs=185.2

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR---------NMAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      ....++++||++|||||++|||+++|++|+++|++|++++|         +.+.++.+.+++...  +..+   .+|+++
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~~---~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGEA---VADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCCE---EECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCeE---EEEeCC
Confidence            33457899999999999999999999999999999999987         666677777777665  3233   379999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      .++++++++++.+.++++|+||||||+...  ..+.+.++|+.++++|+.|+++++++++|+|+++     +.|+||++|
T Consensus        86 ~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-----~~g~IV~is  160 (613)
T 3oml_A           86 VIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-----NYGRIIMTS  160 (613)
T ss_dssp             GGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEC
Confidence            999999999999999999999999998754  3367889999999999999999999999999875     468999999


Q ss_pred             CcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH
Q 020927          170 SRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG  249 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~  249 (319)
                      |.++..+.+               ++..|++||+|+.+|+++|+.|+++.|  |+||+|+||.+ |++...... ..   
T Consensus       161 S~a~~~~~~---------------~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~~~~-~~---  218 (613)
T 3oml_A          161 SNSGIYGNF---------------GQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEGILP-DI---  218 (613)
T ss_dssp             CHHHHHCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CCCCC-HH---
T ss_pred             CHHHcCCCC---------------CChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhhccc-hh---
Confidence            999988644               368899999999999999999999999  99999999975 555544311 11   


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC--------------hhccCHHHHHHHHHHH
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS--------------SQAVNTELAQKLWDFS  308 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~--------------~~~~~~~~~~~~~~~~  308 (319)
                         .....+|+++|+.++||+ ++. .++||+++. ++|.....              ....+.+...+.|+.+
T Consensus       219 ---~~~~~~pedvA~~v~~L~-s~~-~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i  287 (613)
T 3oml_A          219 ---LFNELKPKLIAPVVAYLC-HES-CEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNV  287 (613)
T ss_dssp             ---HHTTCCGGGTHHHHHHTT-STT-CCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHH
T ss_pred             ---hhhcCCHHHHHHHHHHhc-CCC-cCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHh
Confidence               112348999999999999 566 889999887 55543211              1123566777777654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=8e-36  Score=278.14  Aligned_cols=256  Identities=14%  Similarity=0.010  Sum_probs=203.1

Q ss_pred             CCCCEEEEeCCCCchhHH--HHHHHHHCCCEEEEEeCCHHH------------HHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           27 GSGLTAIVTGASSGIGTE--TARVLALRGVHVVMAVRNMAA------------CREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        27 l~~k~vlItGas~gIG~a--ia~~La~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      ..||++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+...  +.++.++.+|++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            689999999999999999  999999999999999986432            12333333332  56799999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccC---------------CCC---------------------cccCcccccchhhh
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIM---------------ATP---------------------FMLSKDNIELQFAT  136 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~---------------~~~---------------------~~~~~~~~~~~~~v  136 (319)
                      ++++++++++.+++|++|+||||||+.               .+.                     .+.+.++|+.++++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999974               111                     13467889999999


Q ss_pred             hhhHHH-HHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCcc--ccchhhHHHHHHHHHHHH
Q 020927          137 NHIGHF-LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF--SAYGQSKLANVLHTSELA  213 (319)
Q Consensus       137 n~~~~~-~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la  213 (319)
                      |..+.+ .+++.+++.+...     +.++||++||.++..+.|.               +  ..|++||+|+++|+++|+
T Consensus       216 n~~~~~~~~~~~l~~~~~~~-----~gg~IV~iSSi~~~~~~p~---------------~~~~aY~ASKaAL~~ltrsLA  275 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFS-----DKATTIAYSYIGSPRTYKI---------------YREGTIGIAKKDLEDKAKLIN  275 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-----EEEEEEEEECCCCGGGTTT---------------TTTSHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhc-----CCcEEEEEeCchhcCCCCc---------------cccHHHHHHHHHHHHHHHHHH
Confidence            999998 7777777654332     2689999999998876553               4  789999999999999999


Q ss_pred             HHhcc-CCCcEEEEEeeCCcccCCcccCchhHHHHHH--HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc--CCcc
Q 020927          214 RRLKE-DGVDITANSVHPGAITTNLFRNISFFSGLVG--LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA--DSNV  288 (319)
Q Consensus       214 ~~~~~-~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~--~~g~  288 (319)
                      .|+++ .|  ||||+|+||++.|++...++.......  ..+..+..+||++++++.+|+. +  ...+|+.+.  .++.
T Consensus       276 ~ELa~~~G--IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~s-d--~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          276 EKLNRVIG--GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFS-E--KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             HHHHHHHS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-H--TTSSSSCCCCCTTSC
T ss_pred             HHhCCccC--eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhh-c--cccCCCccccCCCce
Confidence            99999 99  999999999999998876643222111  1123345789999999999994 3  556788844  4577


Q ss_pred             cccChhccCHHHHHHHHHHHH
Q 020927          289 AQASSQAVNTELAQKLWDFSS  309 (319)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~  309 (319)
                      ...++|+.++++|+++-+.-+
T Consensus       351 ~r~d~~e~~~~~q~~~~~~~~  371 (418)
T 4eue_A          351 LRMDDLELRKDVQDEVDRIWS  371 (418)
T ss_dssp             EESCTTTTCHHHHHHHHHHHH
T ss_pred             eeCChhhcCHHHHHHHHHHHH
Confidence            788999999988887655444

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-35  Score=259.82  Aligned_cols=234  Identities=21%  Similarity=0.256  Sum_probs=190.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRG---VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ...++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...  +.++.++.+|+++++++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHH
Confidence            3456889999999999999999999999999   9999999987765533 344443  457999999999999999999


Q ss_pred             HHHHhcCC--CccEEEEccccCC-C--CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc------CCCCCeEEEe
Q 020927          100 SEFKSSGL--PLNILINNAGIMA-T--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE------SSKEGRIVNV  168 (319)
Q Consensus       100 ~~i~~~~~--~id~lv~nag~~~-~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~~~~~ii~i  168 (319)
                      +++.+.++  ++|+||||||+.. .  ..+.+.+++++.+++|+.+++.+++.++|.|.+....      ....++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            99998888  8999999999865 2  3356778999999999999999999999999764110      0115799999


Q ss_pred             CCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHH
Q 020927          169 SSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLV  248 (319)
Q Consensus       169 sS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~  248 (319)
                      ||..+..+.+.            ..+...|++||++++.|++.++.++++.|  |++++|+||+++|++....       
T Consensus       172 sS~~~~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~-------  230 (267)
T 1sny_A          172 SSILGSIQGNT------------DGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS-------  230 (267)
T ss_dssp             CCGGGCSTTCC------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTT-------
T ss_pred             ecccccccCCC------------CCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCCC-------
Confidence            99988765321            12356899999999999999999999989  9999999999999986531       


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                            ...+|+++|+.+++++. .....++|+++..+|
T Consensus       231 ------~~~~~~~~a~~~~~~~~-~~~~~~~G~~~~~~g  262 (267)
T 1sny_A          231 ------APLDVPTSTGQIVQTIS-KLGEKQNGGFVNYDG  262 (267)
T ss_dssp             ------CSBCHHHHHHHHHHHHH-HCCGGGTTCEECTTS
T ss_pred             ------CCCCHHHHHHHHHHHHH-hcCcCCCCcEEccCC
Confidence                  24689999999999994 566778999987444

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.9e-35  Score=269.68  Aligned_cols=233  Identities=20%  Similarity=0.192  Sum_probs=178.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh----hCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK----EIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++|+||||||++|||++++++|+++|++|++++|+....+...+.+..    ..++.++.++.+|++++++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            478999999999999999999999999988887654433332222222    1224578999999999999999999883


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                        ++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|+++     +.++||++||..+..+.|   
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-----~~g~IV~isS~~~~~~~~---  150 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLP---  150 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCT---
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-----CCCEEEEECCcccccCCC---
Confidence              5799999999997543  3356778999999999999999999999999864     368999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh------------HHH-HH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF------------FSG-LV  248 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~------------~~~-~~  248 (319)
                                  ....|++||++++.|++.|+.|+++.|  |+||+|+||+++|++......            ... +.
T Consensus       151 ------------~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (327)
T 1jtv_A          151 ------------FNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFY  216 (327)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHH
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHH
Confidence                        367899999999999999999999999  999999999999998654310            000 00


Q ss_pred             HHH-----hhhh-cCCHHHHHHHHHHHhcCC--CccCCCccccc
Q 020927          249 GLL-----GKYV-IKNVEQGAATTCYVALHP--HVKGLTGSYFA  284 (319)
Q Consensus       249 ~~~-----~~~~-~~~~~~va~~i~~l~~s~--~~~~~~G~~~~  284 (319)
                      ...     +..+ ..+|+++|+.+++++.++  ...+++|+.+.
T Consensus       217 ~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~~  260 (327)
T 1jtv_A          217 QYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (327)
T ss_dssp             HHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             HHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchHH
Confidence            111     1122 358999999999999653  34566776443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=6.6e-34  Score=254.67  Aligned_cols=217  Identities=24%  Similarity=0.205  Sum_probs=183.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.... ..++.++.+|++++++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888877776652 34789999999999999999999999


Q ss_pred             cCCCccEEEEc-cccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINN-AGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~n-ag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .++++|+|||| +|+... ..+.+.+++++.+++|+.+++.+++.++|.|.+.      .++||++||.++..+.|    
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~----  172 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYP----  172 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCT----
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCcccccCCC----
Confidence            89999999999 576433 2345678899999999999999999999998763      58999999999887544    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRL--KEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~--~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                 +...|++||++++.++++++.++  ...+  |+|++|+||+++|++.....  .    ........+|+
T Consensus       173 -----------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~--~----~~~~~~~~~~~  233 (286)
T 1xu9_A          173 -----------MVAAYSASKFALDGFFSSIRKEYSVSRVN--VSITLCVLGLIDTETAMKAV--S----GIVHMQAAPKE  233 (286)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHHHHTCC--CEEEEEEECCBCCHHHHHHS--C----GGGGGGCBCHH
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeecCccCChhHHHhc--c----ccccCCCCCHH
Confidence                       36789999999999999999999  5567  99999999999999754210  0    01122356899


Q ss_pred             HHHHHHHHHhc
Q 020927          261 QGAATTCYVAL  271 (319)
Q Consensus       261 ~va~~i~~l~~  271 (319)
                      ++|+.++..+.
T Consensus       234 ~vA~~i~~~~~  244 (286)
T 1xu9_A          234 ECALEIIKGGA  244 (286)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999985

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-34  Score=249.85  Aligned_cols=227  Identities=24%  Similarity=0.227  Sum_probs=183.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|++|||||++|||++++++|+++|++|++++|+.+              ..++.++.+|++++++++++++++ +.++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------------ccceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            3789999999999999999999999999999999864              124588999999999999999999 7788


Q ss_pred             CccEEEEccccCCC--CcccCcc----cccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCcccccCCCCC
Q 020927          108 PLNILINNAGIMAT--PFMLSKD----NIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~----~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++|++|||||+...  ..+.+.+    +|++.+++|+.+++.+++.+++.|.+.... .+..++||++||..+..+.|  
T Consensus        66 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  143 (242)
T 1uay_A           66 PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI--  143 (242)
T ss_dssp             CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT--
T ss_pred             CceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC--
Confidence            99999999998644  2233333    899999999999999999999999764210 01234999999999887544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhh-hhcC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGK-YVIK  257 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~-~~~~  257 (319)
                                   +...|++||++++.+++.++.++++.|  |++++|+||++.|++......  ...+....+. .++.
T Consensus       144 -------------~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  208 (242)
T 1uay_A          144 -------------GQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLG  208 (242)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCC
T ss_pred             -------------CCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCC
Confidence                         367899999999999999999999989  999999999999998665421  1222222333 5567


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +|+|+|+.+++++. +  .+++|+.+. ++|..
T Consensus       209 ~~~dva~~~~~l~~-~--~~~~G~~~~v~gG~~  238 (242)
T 1uay_A          209 RPEEYAALVLHILE-N--PMLNGEVVRLDGALR  238 (242)
T ss_dssp             CHHHHHHHHHHHHH-C--TTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHhc-C--CCCCCcEEEEcCCee
Confidence            99999999999994 4  778999877 55543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=4.2e-35  Score=258.05  Aligned_cols=228  Identities=17%  Similarity=0.174  Sum_probs=166.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++|++|++++|+++.++           .   . +.+|++++++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~---~-~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------A---D-LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C---C-TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------c---c-cccCCCCHHHHHHHHHHh---CCCC
Confidence            68999999999999999999999999999999864321           1   1 678999999998887633   3799


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC----
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR----  185 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~----  185 (319)
                      |+||||||+...     .+.|++.+++|+.+++.+++.++|.|+++     +.++||++||..+........+.+.    
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEECChhhhccccccchhhhhhcc
Confidence            999999997542     23589999999999999999999999864     3689999999988732100000000    


Q ss_pred             --CC-------CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h--hHHHHHH--HH
Q 020927          186 --IN-------DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S--FFSGLVG--LL  251 (319)
Q Consensus       186 --~~-------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~--~~~~~~~--~~  251 (319)
                        .+       ...+..+...|++||++++.+++.++.++++.|  |+||+|+||++.|++.... .  .......  ..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  211 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP  211 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CCC
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchhhccchhHHHHHHhccc
Confidence              00       001223567899999999999999999999999  9999999999999987643 1  1111111  22


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +..++.+|+|+|+.+++++ ++...+++|+++. ++|.
T Consensus       212 ~~~~~~~~~dvA~~~~~l~-~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          212 PMGRRAEPSEMASVIAFLM-SPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHT-SGGGTTCCSCEEEESTTH
T ss_pred             ccCCCCCHHHHHHHHHHHh-CchhcCCcCCEEEECCCc
Confidence            3445789999999999999 5777899999887 5553

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=6e-32  Score=284.69  Aligned_cols=243  Identities=16%  Similarity=0.110  Sum_probs=193.3

Q ss_pred             cCCCCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSG-IGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.++++.+++..+.+  +.++.++.+|+++.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            456799999999999998 9999999999999999998 6888777777777755432  56799999999999999999


Q ss_pred             HHHHHhc-----CC-CccEEEEccccCCCC---cccC--cccccchhhhhhhHHHHHHHHH--HHHHhcccccCCCCCeE
Q 020927           99 ASEFKSS-----GL-PLNILINNAGIMATP---FMLS--KDNIELQFATNHIGHFLLTNLL--LETMGKTARESSKEGRI  165 (319)
Q Consensus        99 ~~~i~~~-----~~-~id~lv~nag~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~~~~~i  165 (319)
                      ++++.+.     +| ++|+||||||+....   .+.+  .++|+.++++|+.+++.+++.+  +|.|.++     +.++|
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-----~~G~I  823 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVI  823 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-----CEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-----CCCEE
Confidence            9999988     66 999999999986442   3455  7899999999999999999988  6777653     35799


Q ss_pred             EEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-CCcccCchh
Q 020927          166 VNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH-TSELARRLKEDGVDITANSVHPGAIT-TNLFRNISF  243 (319)
Q Consensus       166 i~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~~~~~~g~~i~v~~v~PG~v~-t~~~~~~~~  243 (319)
                      |++||..+..+                 +...|++||+++++| ++.++.++++.   |+||+|+||+++ |+|......
T Consensus       824 VnISS~ag~~g-----------------g~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~~~~  883 (1887)
T 2uv8_A          824 LPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANNI  883 (1887)
T ss_dssp             EEECSCTTCSS-----------------CBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----CCT
T ss_pred             EEEcChHhccC-----------------CCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEecccccccccccchh
Confidence            99999988763                 357899999999999 89999988765   999999999999 888654222


Q ss_pred             HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc---CCcccccC
Q 020927          244 FSGLVGLLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA---DSNVAQAS  292 (319)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~---~~g~~~~~  292 (319)
                      ........+. +..+|+|+|+.++||+ ++. ..+++|+.+.   ++|.....
T Consensus       884 ~~~~~~~~pl-r~~sPEEVA~avlfLa-Sd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          884 IAEGIEKMGV-RTFSQKEMAFNLLGLL-TPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             THHHHHTTSC-CCEEHHHHHHHHHGGG-SHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             HHHHHHhcCC-CCCCHHHHHHHHHHHh-CCCccccccCcEEEEECCCCeeccc
Confidence            2223333332 3458999999999999 566 6789999775   35654433

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.7e-32  Score=280.55  Aligned_cols=242  Identities=16%  Similarity=0.102  Sum_probs=191.9

Q ss_pred             cCCCCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSG-IGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++..+.+  +.++.++.+|+++.++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            456789999999999998 9999999999999999998 6777666666666644332  45789999999999999999


Q ss_pred             HHHHHhc-----CC-CccEEEEccccCCCC---cccC--cccccchhhhhhhHHHHHHHHH--HHHHhcccccCCCCCeE
Q 020927           99 ASEFKSS-----GL-PLNILINNAGIMATP---FMLS--KDNIELQFATNHIGHFLLTNLL--LETMGKTARESSKEGRI  165 (319)
Q Consensus        99 ~~~i~~~-----~~-~id~lv~nag~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~~~~~i  165 (319)
                      ++++.+.     +| ++|+||||||+....   .+.+  .+.|++++++|+.+++.+++.+  +|.|.++     +.++|
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-----ggGrI  624 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-----PAQVI  624 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-----CEEEC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-----CCCEE
Confidence            9999988     77 899999999986432   3455  7899999999999999999998  7777653     35799


Q ss_pred             EEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHH-HHHHHHHhccCCCcEEEEEeeCCccc-CCcccCchh
Q 020927          166 VNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH-TSELARRLKEDGVDITANSVHPGAIT-TNLFRNISF  243 (319)
Q Consensus       166 i~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~~~~~~g~~i~v~~v~PG~v~-t~~~~~~~~  243 (319)
                      |++||.++..+                 +...|++||+++++| .+.++.++++.   |+||+|+||+++ |+|......
T Consensus       625 VnISSiAG~~G-----------------g~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~~~e~  684 (1688)
T 2pff_A          625 LPMSPNHGTFG-----------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANNI  684 (1688)
T ss_dssp             CCCCSCTTTSS-----------------CBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSCTTTT
T ss_pred             EEEEChHhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccCCchH
Confidence            99999888763                 357899999999998 77888877654   999999999999 787653211


Q ss_pred             HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc-C--Cccccc
Q 020927          244 FSGLVGLLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA-D--SNVAQA  291 (319)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~-~--~g~~~~  291 (319)
                      ........+. +..+|+|+|+.+++|+ ++. ..+++|+.+. +  +|....
T Consensus       685 ~~~~l~~ipl-R~~sPEEVA~aIlFLa-Sd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          685 IAEGIEKMGV-RTFSQKEMAFNLLGLL-TPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             CSTTTSSSSC-CCCCCCTTHHHHHHHT-STTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHhCCC-CCCCHHHHHHHHHHHh-CCCccccccCcEEEEEcCCCeeec
Confidence            1111111222 3458999999999999 566 6889999776 3  555443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=8.9e-31  Score=275.28  Aligned_cols=241  Identities=17%  Similarity=0.113  Sum_probs=191.9

Q ss_pred             cCCCCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSG-IGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ..++++||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++..+..  +.++.++.+|+++.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            446899999999999999 99999999999999999995 777777666666644322  56799999999999999999


Q ss_pred             HHHHHhc---CC-CccEEEEccccCCCC---cccC--cccccchhhhhhhHHHHHHHH--HHHHHhcccccCCCCCeEEE
Q 020927           99 ASEFKSS---GL-PLNILINNAGIMATP---FMLS--KDNIELQFATNHIGHFLLTNL--LLETMGKTARESSKEGRIVN  167 (319)
Q Consensus        99 ~~~i~~~---~~-~id~lv~nag~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~--~~~~l~~~~~~~~~~~~ii~  167 (319)
                      ++++.+.   +| ++|+||||||+....   .+.+  .+.|+.++++|+.+++.+++.  +++.|.++     +.++||+
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-----~~G~IVn  800 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-----PAQVILP  800 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-----CEEECCE
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-----CCCEEEE
Confidence            9999988   88 999999999986442   3555  689999999999999999977  67777653     3579999


Q ss_pred             eCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHH-hccCCCcEEEEEeeCCccc-CCcccCchhHH
Q 020927          168 VSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARR-LKEDGVDITANSVHPGAIT-TNLFRNISFFS  245 (319)
Q Consensus       168 isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~-~~~~g~~i~v~~v~PG~v~-t~~~~~~~~~~  245 (319)
                      +||.++..+                 ++..|++||+++++|++.++.+ +++ +  |+||+|+||+++ |+|........
T Consensus       801 ISS~ag~~g-----------------g~~aYaASKAAL~aLt~~laAeEla~-~--IrVNaVaPG~V~gT~m~~~~~~~~  860 (1878)
T 2uv9_A          801 LSPNHGTFG-----------------NDGLYSESKLALETLFNRWYSESWGN-Y--LTICGAVIGWTRGTGLMSANNLVA  860 (1878)
T ss_dssp             ECSCSSSSS-----------------CCSSHHHHHHHHTTHHHHHHHSTTTT-T--EEEEEEEECCBCCTTSCSHHHHTH
T ss_pred             EcchhhccC-----------------CchHHHHHHHHHHHHHHHHHHHHcCC-C--eEEEEEEecceecCcccccchhhH
Confidence            999988763                 2568999999999998876655 554 3  999999999999 99875422222


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCc-cCCCccccc---CCcccc
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHV-KGLTGSYFA---DSNVAQ  290 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~-~~~~G~~~~---~~g~~~  290 (319)
                      ......+. +..+|+|+|+.++||+ ++.. .+++|+.+.   ++|...
T Consensus       861 ~~~~~~pl-r~~sPeEVA~avlfLa-Sd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          861 EGVEKLGV-RTFSQQEMAFNLLGLM-APAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHHTTTC-CCBCHHHHHHHHHHHH-SHHHHHHHTTSCEEEEESCSGGG
T ss_pred             HHHHhcCC-CCCCHHHHHHHHHHHh-CCcccccccCcEEEEEcCCCccc
Confidence            22222332 3458999999999999 5665 789999775   356543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=4.8e-30  Score=218.25  Aligned_cols=197  Identities=20%  Similarity=0.243  Sum_probs=162.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||++++++|+++  +|++++|+++.++...+.+     +.  .++.+|+++++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            68999999999999999999999  9999999988777665544     22  7889999999999999887    5799


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||||+...  ..+.+.+++++.+++|+.+++.+++.+    .+.     +.++||++||..++.+.+         
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-----~~~~iv~~sS~~~~~~~~---------  129 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-----KGARAVFFGAYPRYVQVP---------  129 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-----EEEEEEEECCCHHHHSST---------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-----CCcEEEEEcChhhccCCC---------
Confidence            999999997643  235677899999999999999999988    222     257999999999887543         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                            +...|+++|++++.+++.++.++++.|  |++++|+||++.|++.....        .+...+.+|+|+|+.++
T Consensus       130 ------~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~dva~~~~  193 (207)
T 2yut_A          130 ------GFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWAPLG--------GPPKGALSPEEAARKVL  193 (207)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGGGGT--------SCCTTCBCHHHHHHHHH
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCccccC--------CCCCCCCCHHHHHHHHH
Confidence                  367899999999999999999999989  99999999999999743221        12245679999999999


Q ss_pred             HHhcCC
Q 020927          268 YVALHP  273 (319)
Q Consensus       268 ~l~~s~  273 (319)
                      +++..+
T Consensus       194 ~~~~~~  199 (207)
T 2yut_A          194 EGLFRE  199 (207)
T ss_dssp             HHHC--
T ss_pred             HHHhCC
Confidence            999543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=1.4e-30  Score=220.88  Aligned_cols=196  Identities=14%  Similarity=0.190  Sum_probs=163.4

Q ss_pred             CC-EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GL-TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k-~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      || ++|||||++|||++++++|+ +|++|++++|+.+                   ++.+|++++++++++++++    +
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----G   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----C
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----C
Confidence            44 79999999999999999999 9999999999863                   4789999999999998875    6


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                      ++|+||||||....  ..+.+.+.|++.+++|+.+++.+++.+.+.|.+       .++||++||..+..+.|       
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~~-------  123 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMEDPIV-------  123 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTSCCT-------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcCCCC-------
Confidence            89999999997543  234677889999999999999999999998854       47999999998876543       


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                              +...|+.+|++++.+++.++.++ +.|  |++++|+||++.|++...       ....+.....+|+|+|+.
T Consensus       124 --------~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~dva~~  185 (202)
T 3d7l_A          124 --------QGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDKL-------EPFFEGFLPVPAAKVARA  185 (202)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHHH-------GGGSTTCCCBCHHHHHHH
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhhh-------hhhccccCCCCHHHHHHH
Confidence                    36789999999999999999998 778  999999999999986421       111233456799999999


Q ss_pred             HHHHhcCCCccCCCccccc
Q 020927          266 TCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       266 i~~l~~s~~~~~~~G~~~~  284 (319)
                      +++++.    .+++|+.+.
T Consensus       186 ~~~~~~----~~~~G~~~~  200 (202)
T 3d7l_A          186 FEKSVF----GAQTGESYQ  200 (202)
T ss_dssp             HHHHHH----SCCCSCEEE
T ss_pred             HHHhhh----ccccCceEe
Confidence            988872    456787554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=1.3e-29  Score=244.13  Aligned_cols=216  Identities=16%  Similarity=0.086  Sum_probs=175.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEE-eCC-------------HHHHHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMA-VRN-------------MAACREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~-~r~-------------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      .++++|||||++|||+++|++|+++|++ |+++ +|+             .+.+++..+++...  +.++.++.+|++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            6899999999999999999999999986 8888 898             35566677777665  67899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                      +++.++++++. +++++|+||||||+...  ..+.+.+.++.++++|+.|.+++.+.+.+.++++    +..++||++||
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~----~~~~~iV~~SS  402 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAG----GRPPVLVLFSS  402 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--------CCCEEEEEEE
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccC----CCCCEEEEECC
Confidence            99999999998 78999999999998755  3467889999999999999999999999988653    12579999999


Q ss_pred             cccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH
Q 020927          171 RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL  250 (319)
Q Consensus       171 ~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~  250 (319)
                      .++..+.|               ++..|+++|+++++|    +.+++.+|  |++++|+||+++|+|.........+. .
T Consensus       403 ~a~~~g~~---------------g~~~YaaaKa~l~~l----A~~~~~~g--i~v~sI~pG~~~tgm~~~~~~~~~~~-~  460 (525)
T 3qp9_A          403 VAAIWGGA---------------GQGAYAAGTAFLDAL----AGQHRADG--PTVTSVAWSPWEGSRVTEGATGERLR-R  460 (525)
T ss_dssp             GGGTTCCT---------------TCHHHHHHHHHHHHH----HTSCCSSC--CEEEEEEECCBTTSGGGSSHHHHHHH-H
T ss_pred             HHHcCCCC---------------CCHHHHHHHHHHHHH----HHHHHhCC--CCEEEEECCccccccccchhhHHHHH-h
Confidence            99998655               478999999998876    56777888  99999999999999975432222221 1


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCC
Q 020927          251 LGKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~  273 (319)
                       ......+|+++++.+.+++..+
T Consensus       461 -~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          461 -LGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             -TTBCCBCHHHHHHHHHHHHHHT
T ss_pred             -cCCCCCCHHHHHHHHHHHHhCC
Confidence             1223468999999999999533

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=4.5e-30  Score=225.02  Aligned_cols=227  Identities=21%  Similarity=0.172  Sum_probs=172.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||+||||++++++|+++|++|++++|+.+..+           .    .+.+|++++++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~----~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A----DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C----CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c----cccCCcccHHHHHHHHHHc---CCCc
Confidence            58999999999999999999999999999999864321           1    1678999999999988865   3689


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC----
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR----  185 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~----  185 (319)
                      |+||||||+...     .+.++..+++|+.+++.+++.+++.|.+.     +.++||++||..++.+.+......+    
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-----~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRG-----QQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhc-----CCceEEEEeccccccccccccchhhhhcc
Confidence            999999997532     24588999999999999999999999764     3589999999988864311000000    


Q ss_pred             CCCC-------CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHH--hh
Q 020927          186 INDQ-------SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLL--GK  253 (319)
Q Consensus       186 ~~~~-------~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~--~~  253 (319)
                      .+..       ....+...|+.||++++.+++.++.++++.|  |++++|+||.+.|++....   ..........  +.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL  211 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTT
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHh
Confidence            0000       0012467899999999999999999998888  9999999999999876532   1111222222  34


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ..+.+|+|+|+++++++ ++...+++|+++..++
T Consensus       212 ~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~v~g  244 (255)
T 2dkn_A          212 GRGSEPREVAEAIAFLL-GPQASFIHGSVLFVDG  244 (255)
T ss_dssp             SSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEEST
T ss_pred             cCCCCHHHHHHHHHHHh-CCCcccceeeEEEecC
Confidence            45689999999999999 4666678998777444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=4.5e-28  Score=266.23  Aligned_cols=232  Identities=16%  Similarity=0.111  Sum_probs=173.9

Q ss_pred             cCCCCCCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhhCCCCceEEEEcCCCCHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSG-IGTETARVLALRGVHVVMAVRNMAA-----CREVKKAIVKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      ....++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +.++..+.+|++++++++
T Consensus      2130 ~~~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~ 2207 (3089)
T 3zen_D         2130 XXXXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDID 2207 (3089)
T ss_dssp             HTCCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHH
T ss_pred             ccccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHH
Confidence            334589999999999999 9999999999999999999998765     44444444322  567899999999999999


Q ss_pred             HHHHHHHh----cCCCccEEEEccccCC-------CCcccCcccccch----hhhhhhHHHHHHHHHHHHHhcccccCCC
Q 020927           97 KFASEFKS----SGLPLNILINNAGIMA-------TPFMLSKDNIELQ----FATNHIGHFLLTNLLLETMGKTARESSK  161 (319)
Q Consensus        97 ~~~~~i~~----~~~~id~lv~nag~~~-------~~~~~~~~~~~~~----~~vn~~~~~~l~~~~~~~l~~~~~~~~~  161 (319)
                      ++++++.+    .+|++|+||||||+..       ...+.+.++|+..    +++|+.+.+.+++.+.+.|......  .
T Consensus      2208 ~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g--~ 2285 (3089)
T 3zen_D         2208 KLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA--S 2285 (3089)
T ss_dssp             HHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC--C
T ss_pred             HHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--c
Confidence            99999988    8899999999999721       1223355667766    9999999999999999999764211  1


Q ss_pred             CCe-EEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCccc-CCc
Q 020927          162 EGR-IVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARR--LKEDGVDITANSVHPGAIT-TNL  237 (319)
Q Consensus       162 ~~~-ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~g~~i~v~~v~PG~v~-t~~  237 (319)
                      ... |+.+++..+..                 .+...|++||+|+.+|+++|+.|  ++ .+  |+||+|+||+++ |++
T Consensus      2286 ~~~ii~~~ss~~g~~-----------------g~~~aYsASKaAl~~LtrslA~E~~~a-~~--IrVn~v~PG~v~tT~l 2345 (3089)
T 3zen_D         2286 RLHVVLPGSPNRGMF-----------------GGDGAYGEAKSALDALENRWSAEKSWA-ER--VSLAHALIGWTKGTGL 2345 (3089)
T ss_dssp             CEEEEEEECSSTTSC-----------------SSCSSHHHHGGGHHHHHHHHHHCSTTT-TT--EEEEEEECCCEECSTT
T ss_pred             eeEEEEECCcccccC-----------------CCchHHHHHHHHHHHHHHHHHhccccC-CC--eEEEEEeecccCCCcc
Confidence            122 33333322221                 12458999999999999999999  65 45  999999999999 776


Q ss_pred             ccCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCc
Q 020927          238 FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTG  280 (319)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G  280 (319)
                      ..............+..+ .+|+|+|..++||+ |+.+..+++
T Consensus      2346 ~~~~~~~~~~~~~~~~r~-~~PeEIA~avlfLa-S~~a~~~~~ 2386 (3089)
T 3zen_D         2346 MGQNDAIVSAVEEAGVTT-YTTDEMAAMLLDLC-TVETKVAAA 2386 (3089)
T ss_dssp             TTTTTTTHHHHGGGSCBC-EEHHHHHHHHHHTT-SHHHHHHHH
T ss_pred             cccchhHHHHHHhcCCCC-CCHHHHHHHHHHHh-ChhhhhHhc
Confidence            554332333333333233 38999999999999 677665444

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.6e-27  Score=227.50  Aligned_cols=210  Identities=19%  Similarity=0.180  Sum_probs=166.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMA---ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            69999999999999999999999998 8999999743   355666666654  67899999999999999999999877


Q ss_pred             cCCCccEEEEccccC-CC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SGLPLNILINNAGIM-AT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      . +++|+||||||+. ..  ..+.+.+.|+..+++|+.+.+++.+.+.+.+         .++||++||.++..+.|   
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~---------~~~iV~~SS~a~~~g~~---  383 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD---------LDAFVLFSSGAAVWGSG---  383 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC---------CSEEEEEEEHHHHTTCT---
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC---------CCEEEEEeChHhcCCCC---
Confidence            6 6899999999986 33  4467889999999999999999998876542         56999999999998654   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHhhhhcCCHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~  260 (319)
                                  ++..|+++|++++.|++.    +...|  |++++|+||++.+..+... .....+. .. .....+|+
T Consensus       384 ------------g~~~YaAaKa~ldala~~----~~~~G--i~v~sV~pG~w~~~gm~~~~~~~~~l~-~~-g~~~l~pe  443 (496)
T 3mje_A          384 ------------GQPGYAAANAYLDALAEH----RRSLG--LTASSVAWGTWGEVGMATDPEVHDRLV-RQ-GVLAMEPE  443 (496)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHH----HHHTT--CCCEEEEECEESSSCC------CHHHH-HT-TEEEECHH
T ss_pred             ------------CcHHHHHHHHHHHHHHHH----HHhcC--CeEEEEECCcccCCccccChHHHHHHH-hc-CCCCCCHH
Confidence                        478999999999887764    45668  9999999999976544322 1111111 11 11235899


Q ss_pred             HHHHHHHHHhcCC
Q 020927          261 QGAATTCYVALHP  273 (319)
Q Consensus       261 ~va~~i~~l~~s~  273 (319)
                      ++++.+..++..+
T Consensus       444 ~~~~~l~~~l~~~  456 (496)
T 3mje_A          444 HALGALDQMLEND  456 (496)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999998533

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=4.6e-27  Score=236.51  Aligned_cols=213  Identities=19%  Similarity=0.227  Sum_probs=172.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHH-HCCC-EEEEEeCC---HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLA-LRGV-HVVMAVRN---MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La-~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+|++|||||++|||+++|++|+ ++|+ +|++++|+   .+..+++.++++..  +.++.++.||++++++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            58999999999999999999999 7998 69999998   44566777777665  778999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+.+ ++|+||||||+...  ..+.+.++|+..+++|+.|++++.+.+.|.|           +||++||.++..+.|  
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~g~~--  672 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVLGSG--  672 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHHTCS--
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcCCCC--
Confidence            8777 99999999999755  4467889999999999999999999986544           899999999998655  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh--hhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG--KYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~  258 (319)
                                   ++..|+++|+    |+++|+++++..|  |++|+|+||++.|.++.... .......+.  .....+
T Consensus       673 -------------g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~~~~-~~~~~~~~~~~g~~~l~  732 (795)
T 3slk_A          673 -------------GQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMASTL-REAEQDRLARSGLLPIS  732 (795)
T ss_dssp             -------------SCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHHHHH-HHHHHHHHHHTTBCCCC
T ss_pred             -------------CCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhhccc-cHHHHHHHHhcCCCCCC
Confidence                         4789999995    6667778888889  99999999999987643220 111111111  122357


Q ss_pred             HHHHHHHHHHHhcCCCcc
Q 020927          259 VEQGAATTCYVALHPHVK  276 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~  276 (319)
                      ++++.+.+..++.++...
T Consensus       733 ~~e~~~~~~~~l~~~~~~  750 (795)
T 3slk_A          733 TEEGLSQFDAACGGAHTV  750 (795)
T ss_dssp             HHHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHHHHHHHhCCCcE
Confidence            888999998888655544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=1.5e-25  Score=198.33  Aligned_cols=196  Identities=18%  Similarity=0.115  Sum_probs=156.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|+||||||+||||++++++|+++|++|++++|++....           +.++.++.+|+++++++.++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            35789999999999999999999999999999999864322           4578999999999999988877      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+||||||+.      +.+.|++.+++|+.+++++++++.+.         ..++||++||..++...+..   ..+
T Consensus        64 -~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~g~~~~~---~~~  124 (267)
T 3rft_A           64 -GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH---------GQPRIVFASSNHTIGYYPQT---ERL  124 (267)
T ss_dssp             -TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGTTSBTT---SCB
T ss_pred             -CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEcchHHhCCCCCC---CCC
Confidence             789999999973      44678999999999999999999442         25799999999887543332   223


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                      .+.....+...|+.||++.+.+++.++.++   |  +++++|.||.+.+++.....          ...+.+++++++.+
T Consensus       125 ~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g--~~~~~vr~~~v~~~~~~~~~----------~~~~~~~~d~a~~~  189 (267)
T 3rft_A          125 GPDVPARPDGLYGVSKCFGENLARMYFDKF---G--QETALVRIGSCTPEPNNYRM----------LSTWFSHDDFVSLI  189 (267)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECBCSSSCCSTTH----------HHHBCCHHHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CeEEEEEeecccCCCCCCCc----------eeeEEcHHHHHHHH
Confidence            444455667889999999999999999886   4  77778888888877544321          11245899999999


Q ss_pred             HHHhcCC
Q 020927          267 CYVALHP  273 (319)
Q Consensus       267 ~~l~~s~  273 (319)
                      ..++..+
T Consensus       190 ~~~~~~~  196 (267)
T 3rft_A          190 EAVFRAP  196 (267)
T ss_dssp             HHHHHCS
T ss_pred             HHHHhCC
Confidence            9988543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=2.4e-25  Score=212.79  Aligned_cols=207  Identities=20%  Similarity=0.227  Sum_probs=162.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMA---ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.+|++|.+++.++++++ 
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            589999999999999999999999999 5999999875   345555666554  668999999999999999999998 


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ..++++|+||||||+...  ..+.+.+.++..+++|+.+.+++.+.+.+.         ..++||++||.++..+.+   
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---------~~~~~V~~SS~a~~~g~~---  369 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL---------DLTAFVLFSSFASAFGAP---  369 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS---------CCSEEEEEEEHHHHTCCT---
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC---------CCCEEEEEcChHhcCCCC---
Confidence            556899999999998654  235678899999999999999999877431         367999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC-cccCchhHHHHHHHH--hhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN-LFRNISFFSGLVGLL--GKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~--~~~~~~~  258 (319)
                                  ++..|+++|++++.|++.    +...|  +++++|+||++.++ |.....     ...+  ......+
T Consensus       370 ------------g~~~Yaaaka~l~~la~~----~~~~g--i~v~~i~pG~~~~~gm~~~~~-----~~~~~~~g~~~i~  426 (486)
T 2fr1_A          370 ------------GLGGYAPGNAYLDGLAQQ----RRSDG--LPATAVAWGTWAGSGMAEGPV-----ADRFRRHGVIEMP  426 (486)
T ss_dssp             ------------TCTTTHHHHHHHHHHHHH----HHHTT--CCCEEEEECCBC-----------------CTTTTEECBC
T ss_pred             ------------CCHHHHHHHHHHHHHHHH----HHhcC--CeEEEEECCeeCCCcccchhH-----HHHHHhcCCCCCC
Confidence                        368999999999987654    44567  99999999999886 432210     1111  1123469


Q ss_pred             HHHHHHHHHHHhcC
Q 020927          259 VEQGAATTCYVALH  272 (319)
Q Consensus       259 ~~~va~~i~~l~~s  272 (319)
                      ++++++.+..++..
T Consensus       427 ~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          427 PETACRALQNALDR  440 (486)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999953

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.92  E-value=2.4e-24  Score=195.87  Aligned_cols=258  Identities=12%  Similarity=0.037  Sum_probs=189.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEeCCHH------------HHHHHHHHHHhhCCCCceEEEEcCCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLA-LRGVHVVMAVRNMA------------ACREVKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La-~~G~~Vv~~~r~~~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      .....+|++|||||++|||+|++..|| ..|+.++++++..+            ....+.+.+++.  +.+...+.||++
T Consensus        45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~  122 (401)
T 4ggo_A           45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAF  122 (401)
T ss_dssp             TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTT
T ss_pred             cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCC
Confidence            456779999999999999999999999 67999998876432            233445555555  778999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCCCc-----------------------cc-------------Cccccc---
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMATPF-----------------------ML-------------SKDNIE---  131 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~-----------------------~~-------------~~~~~~---  131 (319)
                      ++++++++++++++++|++|+||||++......                       +.             +.++++   
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            999999999999999999999999999652100                       00             111122   


Q ss_pred             chhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHH
Q 020927          132 LQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSE  211 (319)
Q Consensus       132 ~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  211 (319)
                      ..|....++.|...+...+.|.+       ++++|.+|+.++....|.            | ....++.+|++++..++.
T Consensus       203 ~vMg~s~~s~w~~al~~a~lla~-------G~siva~SYiGse~t~P~------------Y-~~G~mG~AKaaLEa~~r~  262 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLLEE-------GCITLAYSYIGPEATQAL------------Y-RKGTIGKAKEHLEATAHR  262 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE-------EEEEEEEECCCCGGGHHH------------H-TTSHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHhhhcccC-------CceEEEEeccCcceeecC------------C-CccHHHHHHHHHHHHHHH
Confidence            33444555566666666666644       679999999988775443            1 123578999999999999


Q ss_pred             HHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH---HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccc-ccCCc
Q 020927          212 LARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG---LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSY-FADSN  287 (319)
Q Consensus       212 la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~-~~~~g  287 (319)
                      |+.++++    +++|.+.||.+.|.....++.+.-+..   .+++.. .+-|.+++.+..|.. +.-..-.|.. +++.|
T Consensus       263 La~eL~~----~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk~~-g~heg~ieq~~rl~~-~~ly~~~~~~~~D~~~  336 (401)
T 4ggo_A          263 LNKENPS----IRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMKEK-GNHEGCIEQITRLYA-ERLYRKDGTIPVDEEN  336 (401)
T ss_dssp             HHHHCTT----EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHHHH-TCCCCHHHHHHHHHH-HTTSCTTCCCCCCTTS
T ss_pred             HHHhcCC----CcEEEEEcCccccchhhcCCCchHHHHHHHHHHHhc-CCCCchHHHHHHHHH-HhhccCCCCCCcCCCC
Confidence            9999974    899999999999998877754443222   233332 467889999999884 3333333443 56779


Q ss_pred             ccccChhccCHHHHHHHHHHHH
Q 020927          288 VAQASSQAVNTELAQKLWDFSS  309 (319)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~  309 (319)
                      ...+++|+.++++|+++-+.-+
T Consensus       337 r~r~d~~el~~~vq~~v~~~~~  358 (401)
T 4ggo_A          337 RIRIDDWELEEDVQKAVSALME  358 (401)
T ss_dssp             CEESCTTTTCHHHHHHHHHHHH
T ss_pred             CccCchhhcCHHHHHHHHHHHH
Confidence            9999999999998886655443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=1.8e-24  Score=207.57  Aligned_cols=207  Identities=19%  Similarity=0.181  Sum_probs=164.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMA---ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.+++++  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            579999999999999999999999999 6999999864   345555666544  67899999999999999999886  


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                         +++|+||||||+...  ..+.+.+.++..+++|+.+.+++.+.+.+. .       ..++||++||.++..+.+   
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~-------~~~~~V~~SS~a~~~g~~---  399 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K-------GLDAFVLFSSVTGTWGNA---  399 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T-------TCCCEEEEEEGGGTTCCT---
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c-------CCCEEEEEeCHHhcCCCC---
Confidence               589999999998654  235677899999999999999998876432 0       257999999999887544   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                  ++..|+++|++++.|++.+    ...|  +++++|+||++ .|+|..... ...+ .. ......+|+
T Consensus       400 ------------g~~~YaaaKa~ld~la~~~----~~~g--i~v~sv~pG~~~~tgm~~~~~-~~~~-~~-~g~~~l~~e  458 (511)
T 2z5l_A          400 ------------GQGAYAAANAALDALAERR----RAAG--LPATSVAWGLWGGGGMAAGAG-EESL-SR-RGLRAMDPD  458 (511)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHH----HTTT--CCCEEEEECCBCSTTCCCCHH-HHHH-HH-HTBCCBCHH
T ss_pred             ------------CCHHHHHHHHHHHHHHHHH----HHcC--CcEEEEECCcccCCccccccc-HHHH-Hh-cCCCCCCHH
Confidence                        4689999999999988754    4567  99999999999 788866531 1111 11 122357999


Q ss_pred             HHHHHHHHHhcCC
Q 020927          261 QGAATTCYVALHP  273 (319)
Q Consensus       261 ~va~~i~~l~~s~  273 (319)
                      ++++.++.++..+
T Consensus       459 ~~a~~l~~al~~~  471 (511)
T 2z5l_A          459 AAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=5.2e-25  Score=191.11  Aligned_cols=204  Identities=15%  Similarity=0.107  Sum_probs=148.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCce-EEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV-QAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...+++||+||||||+|+||++++++|+++|++|++++|+++..+....        .++ .++.+|++         +.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~   77 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------ED   77 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SC
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HH
Confidence            3466899999999999999999999999999999999999887654332        257 89999999         33


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +.+.++++|+||||||...      .++++..+++|+.++.++++++...         ..++||++||..+..+..   
T Consensus        78 ~~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~---  139 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR---------GIKRFIMVSSVGTVDPDQ---  139 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH---------TCCEEEEECCTTCSCGGG---
T ss_pred             HHHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc---------CCCEEEEEecCCCCCCCC---
Confidence            4445568999999999743      2568899999999999999988543         256999999966554210   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (319)
                               ...+...|+.+|++++.+++       ..|  ++++.|.||.+.++.....-....  .......+.+++|
T Consensus       140 ---------~~~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~~~~~~~~--~~~~~~~~i~~~D  199 (236)
T 3e8x_A          140 ---------GPMNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEESTGKVTVSP--HFSEITRSITRHD  199 (236)
T ss_dssp             ---------SCGGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCCSEEEEES--SCSCCCCCEEHHH
T ss_pred             ---------ChhhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCCCeEEecc--CCCcccCcEeHHH
Confidence                     00346789999999998775       456  999999999999986543210000  0011234568999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+.+++++..+.   ..|+.+.
T Consensus       200 va~~~~~~~~~~~---~~g~~~~  219 (236)
T 3e8x_A          200 VAKVIAELVDQQH---TIGKTFE  219 (236)
T ss_dssp             HHHHHHHHTTCGG---GTTEEEE
T ss_pred             HHHHHHHHhcCcc---ccCCeEE
Confidence            9999999995332   4566555

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=2e-23  Score=191.40  Aligned_cols=212  Identities=16%  Similarity=0.163  Sum_probs=163.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++|+||||||+|+||++++++|+++ |+ +|++++|++.+.....+.+.    ..++.++.+|+++.+++.++++    
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh----
Confidence            67899999999999999999999999 97 99999999887666554442    3578999999999998887764    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+|||+||....+  .......+.+++|+.++.++++++.+..         .++||++||..+..         
T Consensus        91 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~~---------v~~~V~~SS~~~~~---------  147 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKNA---------ISQVIALSTDKAAN---------  147 (344)
T ss_dssp             ---TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEECCGGGSS---------
T ss_pred             ---cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEecCCccCC---------
Confidence               789999999975422  1123456889999999999999998742         46999999977654         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----H------hhh
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----L------GKY  254 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~------~~~  254 (319)
                               +...|+.||++.+.+++.++.+++..|  +++++|.||.+.++...-++.+......    +      ...
T Consensus       148 ---------p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r  216 (344)
T 2gn4_A          148 ---------PINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTR  216 (344)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEE
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEE
Confidence                     246899999999999999998888788  9999999999998753322222211111    0      012


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      .+.+++|+|+.+++++..+    ..|+.+.
T Consensus       217 ~~i~v~D~a~~v~~~l~~~----~~g~~~~  242 (344)
T 2gn4_A          217 FWITLDEGVSFVLKSLKRM----HGGEIFV  242 (344)
T ss_dssp             EEECHHHHHHHHHHHHHHC----CSSCEEE
T ss_pred             eeEEHHHHHHHHHHHHhhc----cCCCEEe
Confidence            2468999999999998532    2465544

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=4e-23  Score=188.24  Aligned_cols=222  Identities=15%  Similarity=0.068  Sum_probs=162.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEE-EcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM-ELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.+..+...+.+.... +.++.++ .+|+++.+++.++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc----
Confidence            4678999999999999999999999999999999999887766655554332 2468888 899999887766554    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC-CCCCCcC
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS-YPEGIRF  183 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~-~p~~~~~  183 (319)
                         ++|+||||||.....     +++.+.+++|+.++.++++++.+..        ..++||++||.+.+.. .+.... 
T Consensus        83 ---~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~~--------~~~~iv~~SS~~~~~~~~~~~~~-  145 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAATP--------SVKRFVLTSSTVSALIPKPNVEG-  145 (342)
T ss_dssp             ---TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTCT--------TCCEEEEECCGGGTCCCCTTCCC-
T ss_pred             ---CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhCC--------CCcEEEEeccHHHhcCCCCCCCC-
Confidence               789999999975332     3567899999999999999886521        2469999999887632 111000 


Q ss_pred             cCCCCCC----------------CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hH
Q 020927          184 DRINDQS----------------GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FF  244 (319)
Q Consensus       184 ~~~~~~~----------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~  244 (319)
                      ..+++..                ...+...|+.||++.+.+++.++.+++. +  ++++++.||.+.++......   ..
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~~~~~~~~  222 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDPETQSGST  222 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCTTTCCCHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCCCCCCccH
Confidence            0011111                1234568999999999999999998865 6  99999999999998754321   22


Q ss_pred             HHHHHHH------------hhhhcCCHHHHHHHHHHHhcC
Q 020927          245 SGLVGLL------------GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       245 ~~~~~~~------------~~~~~~~~~~va~~i~~l~~s  272 (319)
                      ..+....            ....+..++|+|++++.++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence            2222211            122346899999999999853

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.90  E-value=3.1e-24  Score=186.61  Aligned_cols=191  Identities=15%  Similarity=0.014  Sum_probs=144.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++|++|||||+|+||++++++|+++|+  +|++++|+++..+...        ..++.++.+|+++++++.++++   
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS---
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc---
Confidence            46789999999999999999999999999  9999999875432211        1357889999999988877654   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|+||||||....     .+.++..+++|+.++..+++++.+.         ..++||++||.+++.+       
T Consensus        84 ----~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~---------~~~~iv~~SS~~~~~~-------  138 (242)
T 2bka_A           84 ----GHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADKS-------  138 (242)
T ss_dssp             ----SCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT-------
T ss_pred             ----CCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHHHC---------CCCEEEEEccCcCCCC-------
Confidence                79999999996422     1346788999999999888876432         2569999999877642       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCcccCCcccCchhHHHHHH----HHh----hh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDI-TANSVHPGAITTNLFRNISFFSGLVG----LLG----KY  254 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~----~~~----~~  254 (319)
                                +...|+.+|++++.+++.+       +  + ++++|+||.+.|++.... ....+..    ..+    ..
T Consensus       139 ----------~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  198 (242)
T 2bka_A          139 ----------SNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASG  198 (242)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGG
T ss_pred             ----------CcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCC
Confidence                      2357999999999887643       3  5 799999999999864321 1111111    112    34


Q ss_pred             hcCCHHHHHHHHHHHhcC
Q 020927          255 VIKNVEQGAATTCYVALH  272 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s  272 (319)
                      .+.+++|+|+.+++++..
T Consensus       199 ~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          199 HSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             TEEEHHHHHHHHHHHHTS
T ss_pred             cccCHHHHHHHHHHHHhC
Confidence            467899999999999953

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.90  E-value=2e-22  Score=184.03  Aligned_cols=230  Identities=14%  Similarity=0.131  Sum_probs=163.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |+||||||+|+||++++++|+++|++|++++|+. .........+..   ..++.++.+|+++.+++.++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999842 222222333332   236889999999999999988863     6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC------c
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI------R  182 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~------~  182 (319)
                      +|+|||+||....  ..+.+++...+++|+.++.++++++.+.+.        .++||++||.+.+...+...      .
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~~~~~~~~e~~~~  143 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGDLEQYKYNETETR  143 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCCCCcCCccccccc
Confidence            9999999996432  223456788999999999999999988652        35999999987665322110      0


Q ss_pred             C------cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHH--
Q 020927          183 F------DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLL--  251 (319)
Q Consensus       183 ~------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~--  251 (319)
                      |      ..+.+.....+...|+.+|++.+.+++.++.++   |  ++++++.||.+.++.....   .....+....  
T Consensus       144 ~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~  218 (347)
T 1orr_A          144 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVE  218 (347)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHH
T ss_pred             ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHh
Confidence            0      112333344567789999999999999998876   5  9999999999999865321   1122222111  


Q ss_pred             -------hhh---------hcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          252 -------GKY---------VIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       252 -------~~~---------~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                             +..         .+..++|+|+++++++..  ....+|+.+.
T Consensus       219 ~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~  265 (347)
T 1orr_A          219 IKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFN  265 (347)
T ss_dssp             HHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEE
T ss_pred             CcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEE
Confidence                   111         134799999999999842  2334565444

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=7.7e-23  Score=186.55  Aligned_cols=223  Identities=17%  Similarity=0.095  Sum_probs=160.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|+||||||+|+||++++++|+++|++|++++|+.+....  ..+.......++.++.+|+++.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            468999999999999999999999999999999998654321  11222212346889999999999999998876    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+||||||....  ..+.+++...+++|+.++.++++++... .       ..++||++||.+.+.....    ..+
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-------~~~~iv~~SS~~vyg~~~~----~~~  139 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV-K-------PDTKFYQASTSEMFGKVQE----IPQ  139 (345)
T ss_dssp             -CCSEEEECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C-------TTCEEEEEEEGGGGCSCSS----SSB
T ss_pred             -CCCEEEECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C-------CCceEEEEechhhcCCCCC----CCC
Confidence             78999999997432  2345678899999999999999999853 1       1369999999876643221    112


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhc---cCCCcEEEEEeeCCcccCCcccCch-hHHHHHHH------H---h-
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLK---EDGVDITANSVHPGAITTNLFRNIS-FFSGLVGL------L---G-  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~------~---~-  252 (319)
                      .+.....+...|+.||++.+.+++.++.+++   ..+  +.++.+.||...|.+...+. ........      .   . 
T Consensus       140 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (345)
T 2z1m_A          140 TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNA  217 (345)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCc
Confidence            3334455677899999999999999998876   223  56777889988776533211 11111100      0   0 


Q ss_pred             hhhcCCHHHHHHHHHHHhcC
Q 020927          253 KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s  272 (319)
                      ...+..++|+|+++++++..
T Consensus       218 ~~~~~~v~Dva~a~~~~~~~  237 (345)
T 2z1m_A          218 KRDWGYAPEYVEAMWLMMQQ  237 (345)
T ss_dssp             EECCEEHHHHHHHHHHHHTS
T ss_pred             eeeeEEHHHHHHHHHHHHhC
Confidence            11156899999999999953

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.89  E-value=8.1e-23  Score=187.55  Aligned_cols=237  Identities=14%  Similarity=0.087  Sum_probs=167.2

Q ss_pred             CCCCCCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhhCCCCce
Q 020927            7 KGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA----ACREVKKAIVKEIPNAKV   82 (319)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~----~~~~~~~~~~~~~~~~~v   82 (319)
                      +|+-.|--++..+.....+++++++||||||+|+||++++++|+++|++|++++|+..    .++...+.+... ...++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~   83 (352)
T 1sb8_A            5 HHHGSMGMMSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNF   83 (352)
T ss_dssp             -------CCCHHHHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTE
T ss_pred             ccccchHHHHHHHhhchhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc-cCCce
Confidence            3455555566666666667788899999999999999999999999999999999653    233222221110 02468


Q ss_pred             EEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCC
Q 020927           83 QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKE  162 (319)
Q Consensus        83 ~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~  162 (319)
                      .++.+|+++.+++.++++       ++|+|||+||.....  .+.+++...+++|+.++.++++++.+.         ..
T Consensus        84 ~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~  145 (352)
T 1sb8_A           84 KFIQGDIRNLDDCNNACA-------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA---------KV  145 (352)
T ss_dssp             EEEECCTTSHHHHHHHHT-------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT---------TC
T ss_pred             EEEECCCCCHHHHHHHhc-------CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc---------CC
Confidence            899999999998888776       789999999974321  234567889999999999999998753         24


Q ss_pred             CeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-
Q 020927          163 GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-  241 (319)
Q Consensus       163 ~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-  241 (319)
                      ++||++||...+...+..    .+++.....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++..... 
T Consensus       146 ~~~v~~SS~~~~~~~~~~----~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~  216 (352)
T 1sb8_A          146 QSFTYAASSSTYGDHPGL----PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDPNG  216 (352)
T ss_dssp             SEEEEEEEGGGGTTCCCS----SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCCCS
T ss_pred             CEEEEeccHHhcCCCCCC----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCCCc
Confidence            699999998877643321    12233334456789999999999999998876   5  8889999999998865322 


Q ss_pred             ---hhHHHHHHHHhh-------------hhcCCHHHHHHHHHHHhc
Q 020927          242 ---SFFSGLVGLLGK-------------YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       242 ---~~~~~~~~~~~~-------------~~~~~~~~va~~i~~l~~  271 (319)
                         .....+......             ..+..++|+|++++.++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~  262 (352)
T 1sb8_A          217 AYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAAT  262 (352)
T ss_dssp             TTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred             chhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence               122222222111             124578999999999984

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=6e-22  Score=179.20  Aligned_cols=213  Identities=16%  Similarity=0.129  Sum_probs=157.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..+.++||||||+|+||++++++|+++|++|++++|+... +.           .++.++.+|+++.+++.++++.    
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l~~~~~~~Dl~d~~~~~~~~~~----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------PNVEMISLDIMDSQRVKKVISD----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------TTEEEEECCTTCHHHHHHHHHH----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------ceeeEEECCCCCHHHHHHHHHh----
Confidence            3467899999999999999999999999999999998653 11           1588899999999999998876    


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                       +++|+||||||....  ..+.+++...+++|+.++.++++++ +.+.       +.++||++||.+.+...+.  .-..
T Consensus        73 -~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-------~~~~iv~~SS~~v~g~~~~--~~~~  139 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-------LDCRILTIGSSEEYGMILP--EESP  139 (321)
T ss_dssp             -HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT-------CCCEEEEEEEGGGTBSCCG--GGCS
T ss_pred             -cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC-------CCCeEEEEccHHhcCCCCC--CCCC
Confidence             279999999997532  2334578899999999999999999 5552       2569999999876653210  0111


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh-------------
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG-------------  252 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-------------  252 (319)
                      +++.....+...|+.+|++.+.+++.++.++   |  ++++.+.||.+-++..........+.....             
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  214 (321)
T 2pk3_A          140 VSEENQLRPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV  214 (321)
T ss_dssp             BCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEE
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEe
Confidence            2333344567789999999999999998874   5  999999999999887554222222222111             


Q ss_pred             -----hhhcCCHHHHHHHHHHHhcC
Q 020927          253 -----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 -----~~~~~~~~~va~~i~~l~~s  272 (319)
                           ...+..++|+|+++++++..
T Consensus       215 ~~~~~~~~~v~v~Dva~a~~~~~~~  239 (321)
T 2pk3_A          215 GNLEAVRDFTDVRDIVQAYWLLSQY  239 (321)
T ss_dssp             SCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             CCCCcEEeeEEHHHHHHHHHHHHhC
Confidence                 11245799999999999953

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.89  E-value=5.9e-22  Score=182.12  Aligned_cols=234  Identities=13%  Similarity=0.103  Sum_probs=163.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHH--HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALR-GVHVVMAVRNMA--ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.. ..+   ....++.++.+|+++.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDI---SESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhh---hcCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 789999998641  11111 111   11347899999999999999988763     


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC------CC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE------GI  181 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~------~~  181 (319)
                      ++|+||||||....  ..+.++++..+++|+.++.++++++.+.|..-....+..++||++||.+.+...+.      ..
T Consensus        73 ~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            79999999997432  23346788899999999999999999987431000001259999999875543211      00


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh--------
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK--------  253 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------  253 (319)
                      ++..+++.....+...|+.||++.+.+++.++.++   |  ++++.|.||.+.++......+...+......        
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence            11123344445567789999999999999998876   5  8899999999999875432222222222111        


Q ss_pred             -----hhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          254 -----YVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       254 -----~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                           ..+..++|+|+++++++..+    .+|+.+.
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~  257 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMVVTEG----KAGETYN  257 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEE
T ss_pred             CCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEE
Confidence                 12457999999999998422    3565544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.89  E-value=5.2e-22  Score=180.71  Aligned_cols=214  Identities=15%  Similarity=0.088  Sum_probs=156.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHH--HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMA--ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++++||||||+|+||++++++|+++|  ++|++++|+..  ..+.. +.+   ....++.++.+|+++.+++.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~---~~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDL---EDDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTT---TTCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhh---ccCCceEEEEcCCCCHHHHHHHhh---
Confidence            46789999999999999999999997  79999998642  11111 111   113478999999999999888873   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|+||||||....  ..+.+++...+++|+.++.++++++.+.  .      ..++||++||.+.+...+.    
T Consensus        75 ----~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~------~~~~iv~~SS~~vyg~~~~----  136 (336)
T 2hun_A           75 ----KVDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE--N------PEVRFVHVSTDEVYGDILK----  136 (336)
T ss_dssp             ----TCSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C------TTSEEEEEEEGGGGCCCSS----
T ss_pred             ----CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C------CCcEEEEeccHHHHCCCCC----
Confidence                79999999997432  2234567889999999999999999876  1      1469999999876543211    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh-----------
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG-----------  252 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-----------  252 (319)
                      ..+++.....+...|+.+|++.+.+++.++.++   |  ++++.+.||.+.++......+...+.....           
T Consensus       137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (336)
T 2hun_A          137 GSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTG  211 (336)
T ss_dssp             SCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC-
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCC
Confidence            122333445566789999999999999998875   5  899999999999987543222222222211           


Q ss_pred             --hhhcCCHHHHHHHHHHHhc
Q 020927          253 --KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 --~~~~~~~~~va~~i~~l~~  271 (319)
                        ...+..++|+|+++++++.
T Consensus       212 ~~~~~~i~v~Dva~~~~~~~~  232 (336)
T 2hun_A          212 KNVRDWLYVEDHVRAIELVLL  232 (336)
T ss_dssp             --CEEEEEHHHHHHHHHHHHH
T ss_pred             CceeeeEEHHHHHHHHHHHHh
Confidence              1224578999999999984

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=4.4e-22  Score=181.56  Aligned_cols=185  Identities=21%  Similarity=0.124  Sum_probs=142.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++++||||||+|+||++++++|+++|++|++++|+.+...+..+.+.... +.++.++.+|+++++++.+++++     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46899999999999999999999999999999997765555555544332 45789999999999999998886     3


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+||||||.....  ...+...+.+++|+.++.++++.+..    .     ..++||++||.+.+...+.    ..++
T Consensus        78 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~-----~~~~iv~~SS~~~~g~~~~----~~~~  142 (341)
T 3enk_A           78 PITAAIHFAALKAVG--ESVAKPIEYYRNNLDSLLSLLRVMRE----R-----AVKRIVFSSSATVYGVPER----SPID  142 (341)
T ss_dssp             CCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----T-----TCCEEEEEEEGGGBCSCSS----SSBC
T ss_pred             CCcEEEECccccccC--ccccChHHHHHHHHHHHHHHHHHHHh----C-----CCCEEEEEecceEecCCCC----CCCC
Confidence            899999999975331  12344567899999999988776543    2     2569999999877643211    1233


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      +.....+...|+.||.+.+.+++.++.++.  +  ++++.+.||.+-++.
T Consensus       143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          143 ETFPLSATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAH  188 (341)
T ss_dssp             TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCc
Confidence            444455667899999999999999998865  4  888899999887663

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=2.3e-22  Score=172.67  Aligned_cols=197  Identities=10%  Similarity=0.079  Sum_probs=140.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLA-LRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La-~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|++|||||+|+||++++++|+ ++|++|++++|+++ .++++.    ..  ..++.++.+|+++++++.++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc------
Confidence            3789999999999999999999 89999999999987 555432    11  5578999999999999988876      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc-CcC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR-FDR  185 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~-~~~  185 (319)
                       ++|+||||+|..                 |+.     .+.+++.|++.     ..++||++||..++...|.... +. 
T Consensus        73 -~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~-----~~~~iv~iSs~~~~~~~~~~~~~~~-  123 (221)
T 3r6d_A           73 -NAEVVFVGAMES-----------------GSD-----MASIVKALSRX-----NIRRVIGVSMAGLSGEFPVALEKWT-  123 (221)
T ss_dssp             -TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHT-----TCCEEEEEEETTTTSCSCHHHHHHH-
T ss_pred             -CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhc-----CCCeEEEEeeceecCCCCccccccc-
Confidence             789999999952                 322     78888888764     3579999999887764332100 00 


Q ss_pred             CCCCCCCCccc-cchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC-cccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          186 INDQSGYNRFS-AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN-LFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       186 ~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                            ..... .|+.+|.+++.+++.       .|  ++++.|+||++.++ ..........  .........+++|+|
T Consensus       124 ------~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~--~~~~~~~~~~~~dvA  186 (221)
T 3r6d_A          124 ------FDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYNDPEXTDYELIPE--GAQFNDAQVSREAVV  186 (221)
T ss_dssp             ------HHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECCTTCCCCEEECT--TSCCCCCEEEHHHHH
T ss_pred             ------ccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCCCCCcceeeccC--CccCCCceeeHHHHH
Confidence                  00011 799999999887643       56  99999999999887 3222211000  001112246789999


Q ss_pred             HHHHHHh--cCCCccCCCccccc
Q 020927          264 ATTCYVA--LHPHVKGLTGSYFA  284 (319)
Q Consensus       264 ~~i~~l~--~s~~~~~~~G~~~~  284 (319)
                      +.+++++  . +...++++.+..
T Consensus       187 ~~~~~l~~~~-~~~~~~~~~~~i  208 (221)
T 3r6d_A          187 KAIFDILHAA-DETPFHRTSIGV  208 (221)
T ss_dssp             HHHHHHHTCS-CCGGGTTEEEEE
T ss_pred             HHHHHHHHhc-Chhhhhcceeee
Confidence            9999999  5 444566665444

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=7.9e-22  Score=181.19  Aligned_cols=222  Identities=16%  Similarity=0.085  Sum_probs=164.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++++||||||+|+||++++++|+++|++|++++|+.+........+.   ...++.++.+|+++++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            568999999999999999999999999999999997654433333221   1447889999999999999998876    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+|||+||...  ...+.+++...+++|+.++.++++++.+. .       ..++||++||...+...+..   ..+
T Consensus        80 -~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-------~~~~~v~~SS~~vyg~~~~~---~~~  145 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV-G-------GVKAVVNITSDKCYDNKEWI---WGY  145 (357)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-C-------CCCEEEEECCGGGBCCCCSS---SCB
T ss_pred             -CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh-C-------CCCeEEEecCHHHhCCCCcC---CCC
Confidence             7999999999632  12334667889999999999999999763 1       24699999998866532210   112


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhc------cCCCcEEEEEeeCCcccCCcccC-chhHHHHHHHHh-------
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLK------EDGVDITANSVHPGAITTNLFRN-ISFFSGLVGLLG-------  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~------~~g~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~-------  252 (319)
                      .+.....+...|+.+|.+.+.+++.++.++.      +.|  ++++.+.||.+-++.... ..+...+.....       
T Consensus       146 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~  223 (357)
T 1rkx_A          146 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII  223 (357)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE
Confidence            2233444567899999999999999999875      346  999999999999875421 122233332211       


Q ss_pred             -----hhhcCCHHHHHHHHHHHhc
Q 020927          253 -----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 -----~~~~~~~~~va~~i~~l~~  271 (319)
                           ...+..++|+|++++.++.
T Consensus       224 ~~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          224 RNPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             SCTTCEECCEETHHHHHHHHHHHH
T ss_pred             CCCCCeeccEeHHHHHHHHHHHHH
Confidence                 1123578999999999884

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=2e-21  Score=177.68  Aligned_cols=224  Identities=13%  Similarity=0.036  Sum_probs=155.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .+.+++++||||||+|+||.+++++|+++|  ++|+..+|......  ...+.......++.++.+|+++.+++.++++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            356788999999999999999999999999  67888887542110  11111122235799999999999999999886


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .     ++|+|||+||.....  ...+.....+++|+.++..+++++...         ..+++|++||...+...+.. 
T Consensus        97 ~-----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vy~~~~~~-  159 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHVD--RSIENPIPFYDTNVIGTVTLLELVKKY---------PHIKLVQVSTDEVYGSLGKT-  159 (346)
T ss_dssp             H-----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS---------TTSEEEEEEEGGGGCCCCSS-
T ss_pred             c-----CCCEEEECCcccchh--hhhhCHHHHHHHHHHHHHHHHHHHHhc---------CCCEEEEeCchHHhCCCCcC-
Confidence            4     699999999975432  244677889999999999999888653         24589999998776543211 


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhh-------
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKY-------  254 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-------  254 (319)
                        ..+.+.....+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++......+...+.......       
T Consensus       160 --~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
T 4egb_A          160 --GRFTEETPLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYG  232 (346)
T ss_dssp             --CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEET
T ss_pred             --CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeC
Confidence              123344455667889999999999999988775   5  88889999999887654333333333322111       


Q ss_pred             ------hcCCHHHHHHHHHHHhcCC
Q 020927          255 ------VIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       255 ------~~~~~~~va~~i~~l~~s~  273 (319)
                            .+..++|+|++++.++..+
T Consensus       233 ~~~~~~~~i~v~Dva~a~~~~~~~~  257 (346)
T 4egb_A          233 DGLNVRDWLHVTDHCSAIDVVLHKG  257 (346)
T ss_dssp             TSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcC
Confidence                  1235899999999999543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.87  E-value=8.9e-22  Score=179.13  Aligned_cols=213  Identities=15%  Similarity=0.126  Sum_probs=146.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ...++++++||||||+|+||++++++|+++|++|++++|+.....+..+    .  -.++.++.+|+++.+++.++++++
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--l~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----P--VAGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC----S--CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh----c--cCCceEEEeeCCCHHHHHHHHhhc
Confidence            3456789999999999999999999999999999999996543221111    1  136889999999999999998876


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+||||||.....   +.+++.  +++|+.++.++++++...         ..++||++||.+.+...+.. +
T Consensus        88 -----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~~~~~~~-~  147 (330)
T 2pzm_A           88 -----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA---------GVKRLLNFQTALCYGRPATV-P  147 (330)
T ss_dssp             -----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH---------TCSEEEEEEEGGGGCSCSSS-S
T ss_pred             -----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCccC-C
Confidence                 799999999975432   334455  999999999999998742         25699999998876533110 0


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCCcccCCcccCchhHHHHHHH---Hh---hhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDIT-ANSVHPGAITTNLFRNISFFSGLVGL---LG---KYV  255 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~-v~~v~PG~v~t~~~~~~~~~~~~~~~---~~---~~~  255 (319)
                       ..+++..  .+...|+.+|++.+.+++.+  ++....  || ++.+.||. .+++...  +...+...   +.   ...
T Consensus       148 -~~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~~~~~~--iR~~~v~gp~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~  217 (330)
T 2pzm_A          148 -IPIDSPT--APFTSYGISKTAGEAFLMMS--DVPVVS--LRLANVTGPRL-AIGPIPT--FYKRLKAGQKCFCSDTVRD  217 (330)
T ss_dssp             -BCTTCCC--CCCSHHHHHHHHHHHHHHTC--SSCEEE--EEECEEECTTC-CSSHHHH--HHHHHHTTCCCCEESCEEC
T ss_pred             -CCcCCCC--CCCChHHHHHHHHHHHHHHc--CCCEEE--EeeeeeECcCC-CCCHHHH--HHHHHHcCCEEeCCCCEec
Confidence             0111111  35678999999999988776  333333  56 56666664 3332211  11111100   00   223


Q ss_pred             cCCHHHHHH-HHHHHhc
Q 020927          256 IKNVEQGAA-TTCYVAL  271 (319)
Q Consensus       256 ~~~~~~va~-~i~~l~~  271 (319)
                      +..++|+|+ ++++++.
T Consensus       218 ~i~~~Dva~~a~~~~~~  234 (330)
T 2pzm_A          218 FLDMSDFLAIADLSLQE  234 (330)
T ss_dssp             EEEHHHHHHHHHHHTST
T ss_pred             ceeHHHHHHHHHHHHhh
Confidence            468999999 9999984

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.87  E-value=1.3e-21  Score=178.37  Aligned_cols=229  Identities=17%  Similarity=0.120  Sum_probs=152.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++|+||||||+|+||++++++|+++|++|+++.|+.+...+... +.. .+  ..++.++.+|+++.+++.++++   
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~---   76 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLD-LPKAETHLTLWKADLADEGSFDEAIK---   76 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHT-STTHHHHEEEEECCTTSTTTTHHHHT---
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHh-cccCCCeEEEEEcCCCCHHHHHHHHc---
Confidence            4578999999999999999999999999999999998654332211 111 11  1358899999999998887765   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          .+|+|||+|+... .  ...+.....+++|+.++.++++++.+..        ..++||++||.+++...+.... 
T Consensus        77 ----~~d~Vih~A~~~~-~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~--------~~~riV~~SS~~~~~~~~~~~~-  140 (337)
T 2c29_D           77 ----GCTGVFHVATPMD-F--ESKDPENEVIKPTIEGMLGIMKSCAAAK--------TVRRLVFTSSAGTVNIQEHQLP-  140 (337)
T ss_dssp             ----TCSEEEECCCCCC-S--SCSSHHHHTHHHHHHHHHHHHHHHHHHS--------CCCEEEEECCGGGTSCSSSCCS-
T ss_pred             ----CCCEEEEeccccC-C--CCCChHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEeeeHhhcccCCCCCc-
Confidence                6899999998641 1  1122335689999999999999987653        1459999999886653221100 


Q ss_pred             cCCCCCCC---------CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h-hHHHH-----
Q 020927          184 DRINDQSG---------YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S-FFSGL-----  247 (319)
Q Consensus       184 ~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~-~~~~~-----  247 (319)
                       .+++...         ..+...|+.||.+.+.+++.++.+.   |  ++++++.||.+.++..... . .....     
T Consensus       141 -~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~  214 (337)
T 2c29_D          141 -VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---N--IDFITIIPTLVVGPFIMSSMPPSLITALSPIT  214 (337)
T ss_dssp             -EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSCSSCCHHHHHHTHHHH
T ss_pred             -ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHc
Confidence             0111100         0122369999999998887766543   5  8999999999998864321 1 11111     


Q ss_pred             -----HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          248 -----VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       248 -----~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                           .......++..++|+|+++++++..+   ..+|.|+.
T Consensus       215 g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~~~  253 (337)
T 2c29_D          215 GNEAHYSIIRQGQFVHLDDLCNAHIYLFENP---KAEGRYIC  253 (337)
T ss_dssp             TCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT---TCCEEEEE
T ss_pred             CCCccccccCCCCEEEHHHHHHHHHHHhcCc---ccCceEEE
Confidence                 00011223678999999999998532   23466544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=9.6e-22  Score=180.12  Aligned_cols=224  Identities=14%  Similarity=0.048  Sum_probs=163.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC---CceEEEEcCCCCHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN---AKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~   98 (319)
                      ...+.+++|+||||||+|+||++++++|+++|++|++++|+..........+....+.   .++.++.+|+++.+++.++
T Consensus        18 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   97 (351)
T 3ruf_A           18 TQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV   97 (351)
T ss_dssp             HHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH
T ss_pred             HhhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence            3446678999999999999999999999999999999999654433333444332111   5799999999999988877


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927           99 ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      ++       ++|+|||+||....  ..+.++....+++|+.++.++++++...         ..+++|++||...+...+
T Consensus        98 ~~-------~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~v~~SS~~vyg~~~  159 (351)
T 3ruf_A           98 MK-------GVDHVLHQAALGSV--PRSIVDPITTNATNITGFLNILHAAKNA---------QVQSFTYAASSSTYGDHP  159 (351)
T ss_dssp             TT-------TCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGTTCC
T ss_pred             hc-------CCCEEEECCccCCc--chhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEecHHhcCCCC
Confidence            66       79999999996432  2234567788999999999999988653         245999999988775433


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhh-
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGK-  253 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-  253 (319)
                      .    ..+++.....+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++.....    .+...+...... 
T Consensus       160 ~----~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (351)
T 3ruf_A          160 A----LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKG  230 (351)
T ss_dssp             C----SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHT
T ss_pred             C----CCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcC
Confidence            2    123333444566789999999999999988876   5  7888899999987754332    222232222211 


Q ss_pred             ------------hhcCCHHHHHHHHHHHhcC
Q 020927          254 ------------YVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       254 ------------~~~~~~~~va~~i~~l~~s  272 (319)
                                  ..+..++|+|++++.++..
T Consensus       231 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          231 DDVYINGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             CCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             CCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence                        1134689999999999853

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.87  E-value=1.3e-21  Score=170.62  Aligned_cols=211  Identities=13%  Similarity=0.003  Sum_probs=147.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +++|++|||||+|+||++++++|+++  |++|++++|+++..+..         ..++.++.+|+++.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            46789999999999999999999999  79999999998665432         3467889999999999888875    


Q ss_pred             cCCCccEEEEccccCCCC-----------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          105 SGLPLNILINNAGIMATP-----------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                         ++|+||||||.....           .....+.+...+++|+.++..+++++...         +.++||++||..+
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~  136 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---------GVKHIVVVGSMGG  136 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---------TCSEEEEEEETTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---------CCCEEEEEcCccC
Confidence               689999999975321           11223445678899999999999887653         1469999999876


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHH--
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL--  251 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~--  251 (319)
                      ....+.         ...| ....|+.+|.+++.+++.       .|  +++++|.||.+.++..............+  
T Consensus       137 ~~~~~~---------~~~~-~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~  197 (253)
T 1xq6_A          137 TNPDHP---------LNKL-GNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQ  197 (253)
T ss_dssp             TCTTCG---------GGGG-GGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSSSSCEEEESTTGGGG
T ss_pred             CCCCCc---------cccc-cchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcchhhhhccCCcCCcC
Confidence            532110         0001 113467799999887642       56  99999999999987533211100000001  


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ....+.+++|+|+.+++++..+.   .+|+.+.
T Consensus       198 ~~~~~~~~~Dva~~~~~~~~~~~---~~g~~~~  227 (253)
T 1xq6_A          198 TDTKTVPRADVAEVCIQALLFEE---AKNKAFD  227 (253)
T ss_dssp             SSCCEEEHHHHHHHHHHHTTCGG---GTTEEEE
T ss_pred             CCCcEEcHHHHHHHHHHHHcCcc---ccCCEEE
Confidence            12235689999999999995332   2565444

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.87  E-value=7.5e-22  Score=181.81  Aligned_cols=216  Identities=14%  Similarity=0.024  Sum_probs=149.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHH--CCCEEEEEeCCHHHHHHH---HHHHH--hhCCCCceEEEEcCCCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLAL--RGVHVVMAVRNMAACREV---KKAIV--KEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~--~G~~Vv~~~r~~~~~~~~---~~~~~--~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      .+++++|+||||||+|+||++++++|++  .|++|++++|+.......   .+.+.  ....+.++.++.+|+++++++.
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            4678999999999999999999999999  899999999965411100   00000  0112446799999999999988


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           97 KFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++      ...++|+||||||+..    .+.+.+...+++|+.++.++++++...          +.+||++||.+.+..
T Consensus        85 ~~------~~~~~D~vih~A~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~~~V~~SS~~vyg~  144 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD----TTMLNQELVMKTNYQAFLNLLEIARSK----------KAKVIYASSAGVYGN  144 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG----GGCCCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGGCS
T ss_pred             Hh------hccCCCEEEECCccCC----ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEeCcHHHhCC
Confidence            76      2348999999999542    245778899999999999999988431          346999999666543


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~  252 (319)
                      .+.     .+.+.....+...|+.||.+.+.+++.++.+       +.+..+.|+.+-.+.....    .....+.....
T Consensus       145 ~~~-----~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~  212 (362)
T 3sxp_A          145 TKA-----PNVVGKNESPENVYGFSKLCMDEFVLSHSND-------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAM  212 (362)
T ss_dssp             CCS-----SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHH
T ss_pred             CCC-----CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHH
Confidence            222     2333445556678999999999998877665       3344466666655433211    12222222211


Q ss_pred             h-------------hhcCCHHHHHHHHHHHhc
Q 020927          253 K-------------YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ~-------------~~~~~~~~va~~i~~l~~  271 (319)
                      .             ..+..++|+|++++.++.
T Consensus       213 ~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~  244 (362)
T 3sxp_A          213 AFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK  244 (362)
T ss_dssp             TTSEEECSGGGCCEEECEEHHHHHHHHHHHTT
T ss_pred             hCCCeEEECCCCeEEccEEHHHHHHHHHHHHh
Confidence            1             123458999999999995

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=2.2e-20  Score=174.21  Aligned_cols=228  Identities=13%  Similarity=0.071  Sum_probs=156.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHH----------------HHHHHHhhCCCCceEEEEcCCC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACRE----------------VKKAIVKEIPNAKVQAMELDLS   90 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~----------------~~~~~~~~~~~~~v~~~~~Dl~   90 (319)
                      .++++||||||+|.||++++++|+++|++|++++|+......                ....+.... +.++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            468899999999999999999999999999999987543211                111111111 456889999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeC
Q 020927           91 SLASVRKFASEFKSSGLPLNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVS  169 (319)
Q Consensus        91 ~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~is  169 (319)
                      +.+++.++++.+     ++|+||||||...... ..+.+.+...+++|+.++.++++++.+..        ...+||++|
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--------~~~~~V~~S  154 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG--------EECHLVKLG  154 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC--------TTCEEEEEC
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC--------CCcEEEEeC
Confidence            999999988865     6999999999754321 12344456789999999999999987642        124999999


Q ss_pred             CcccccCCCCCCcCcCCC---------CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC
Q 020927          170 SRRHQFSYPEGIRFDRIN---------DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN  240 (319)
Q Consensus       170 S~~~~~~~p~~~~~~~~~---------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~  240 (319)
                      |.+.+...+...+.++..         ......+...|+.||++.+.+++.++.++   |  +++++|.||.+-++....
T Consensus       155 S~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v~Gp~~~~  229 (404)
T 1i24_A          155 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVKTDE  229 (404)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSCCTT
T ss_pred             cHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEecceeeCCCCCc
Confidence            987664322111110000         00134456789999999999999988876   5  999999999998875421


Q ss_pred             -----------------chhHHHHHHHHhh-------------hhcCCHHHHHHHHHHHhcCC
Q 020927          241 -----------------ISFFSGLVGLLGK-------------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       241 -----------------~~~~~~~~~~~~~-------------~~~~~~~~va~~i~~l~~s~  273 (319)
                                       ......+......             ..+..++|+|++++.++..+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~  292 (404)
T 1i24_A          230 TEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP  292 (404)
T ss_dssp             GGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC
T ss_pred             cccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCc
Confidence                             1122222222111             12346899999999998543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.87  E-value=2.7e-21  Score=176.89  Aligned_cols=175  Identities=14%  Similarity=0.062  Sum_probs=131.8

Q ss_pred             cccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH
Q 020927           19 EEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        19 ~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      .+.....++++|+||||||+|+||.+++++|+++|++|++++|+.+.              .++.++.+|+++.+++.++
T Consensus         9 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A            9 HHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             ------------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHH
T ss_pred             CCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHH
Confidence            34445567889999999999999999999999999999999998643              3678899999999998887


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927           99 ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                      ++       ++|+|||+|+....    +...+...+++|+.++.++++++...         ..++||++||...+...+
T Consensus        75 ~~-------~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~~---------~~~~~V~~SS~~vyg~~~  134 (347)
T 4id9_A           75 IM-------GVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASAA---------GVRRFVFASSGEVYPENR  134 (347)
T ss_dssp             HT-------TCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGTTTTS
T ss_pred             Hh-------CCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEECCHHHhCCCC
Confidence            76       78999999996433    33455889999999999999988652         256999999987665311


Q ss_pred             CCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 020927          179 EGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT  234 (319)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~  234 (319)
                        .....+.+.....+...|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-
T Consensus       135 --~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~  183 (347)
T 4id9_A          135 --PEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQ  183 (347)
T ss_dssp             --CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEE
T ss_pred             --CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEe
Confidence              112234444555667889999999999999888774   5  889999999887

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=3.1e-21  Score=176.06  Aligned_cols=222  Identities=18%  Similarity=0.144  Sum_probs=156.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRG-------VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      .+.+++++||||||+|+||++++++|+++|       ++|++++|+.+....        ....++.++.+|+++++++.
T Consensus         9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~   80 (342)
T 2hrz_A            9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAE   80 (342)
T ss_dssp             CSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHH
T ss_pred             CCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHH
Confidence            456789999999999999999999999999       799999997542211        11457889999999999988


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           97 KFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      ++++      +++|+||||||....   .+.+++...+++|+.++.++++++.+...+.    +..++||++||.+.+..
T Consensus        81 ~~~~------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~----~~~~~iv~~SS~~~~~~  147 (342)
T 2hrz_A           81 KLVE------ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKD----GYKPRVVFTSSIAVFGA  147 (342)
T ss_dssp             HHHH------TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGCCS
T ss_pred             HHHh------cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhccccc----CCCcEEEEeCchHhhCC
Confidence            8775      379999999997431   2346788999999999999999988754221    01469999999977653


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEee--CCcccCCcccCchhHHHHHHHHhh-
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVH--PGAITTNLFRNISFFSGLVGLLGK-  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~--PG~v~t~~~~~~~~~~~~~~~~~~-  253 (319)
                      ...    ..++++....+...|+.+|++.+.+++.++.+..-....+|++.|.  ||...+...   .+...+...... 
T Consensus       148 ~~~----~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~---~~~~~~~~~~~~~  220 (342)
T 2hrz_A          148 PLP----YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS---GFFSNILREPLVG  220 (342)
T ss_dssp             SCC----SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG---GHHHHHHHHHHTT
T ss_pred             CCC----CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH---HHHHHHHHHHhcC
Confidence            211    1233333444667899999999999988887642221126777776  887655431   122222221110 


Q ss_pred             ------------hhcCCHHHHHHHHHHHhcCC
Q 020927          254 ------------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 ------------~~~~~~~~va~~i~~l~~s~  273 (319)
                                  ..+..++|+|++++.++..+
T Consensus       221 ~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~  252 (342)
T 2hrz_A          221 QEAVLPVPESIRHWHASPRSAVGFLIHGAMID  252 (342)
T ss_dssp             CCEEECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred             CCeeccCCCccceeeEehHHHHHHHHHHHhcc
Confidence                        11357999999999998543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=1.2e-20  Score=172.45  Aligned_cols=214  Identities=18%  Similarity=0.132  Sum_probs=154.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |+||||||+|+||++++++|+++  |++|++++|+... ......    .....++.++.+|+++++++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE----AILGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG----GGCSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh----hhccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  8899999986421 001111    1113578999999999998888776      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC------
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG------  180 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~------  180 (319)
                       .+|+|||+||....  ..+.+++...+++|+.++.++++++.+.          +.+||++||.+.+...+..      
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCccccccccc
Confidence             56999999997432  2234567889999999999999999875          2399999998765422110      


Q ss_pred             --CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh------
Q 020927          181 --IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG------  252 (319)
Q Consensus       181 --~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~------  252 (319)
                        .+...+.+.....+...|+.+|++.+.+++.++.++   |  ++++.+.||.+-++......+...+.....      
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  216 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  216 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCce
Confidence              000123344445567789999999999999998876   5  899999999999887543222222222211      


Q ss_pred             -------hhhcCCHHHHHHHHHHHhc
Q 020927          253 -------KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 -------~~~~~~~~~va~~i~~l~~  271 (319)
                             ...+..++|+|++++.++.
T Consensus       217 ~~~~~~~~~~~i~v~Dva~~~~~~~~  242 (348)
T 1oc2_A          217 LYGEGKNVRDWIHTNDHSTGVWAILT  242 (348)
T ss_dssp             EETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred             EecCCCceEeeEEHHHHHHHHHHHhh
Confidence                   1124578999999999985

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.86  E-value=2.9e-21  Score=174.00  Aligned_cols=217  Identities=18%  Similarity=0.118  Sum_probs=156.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+||||||+|+||++++++|+++|++|++++|+.+......        ...+.++.+|+++.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            57999999999999999999999999999999764322111        346889999999986 544332       3 


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||....  ..+.+.+...+++|+.++.++++++...         ..++||++||...+...+.    ..+.+.
T Consensus        64 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~vyg~~~~----~~~~e~  128 (312)
T 3ko8_A           64 DVVFHFAANPEV--RLSTTEPIVHFNENVVATFNVLEWARQT---------GVRTVVFASSSTVYGDADV----IPTPEE  128 (312)
T ss_dssp             SEEEECCSSCSS--SGGGSCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCSCSS----SSBCTT
T ss_pred             CEEEECCCCCCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeCcHHHhCCCCC----CCCCCC
Confidence            999999996432  3455678899999999999999988543         2459999999887754221    223344


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh--------------hh
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK--------------YV  255 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~  255 (319)
                      ....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++..... ....+......              ..
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~  202 (312)
T 3ko8_A          129 EPYKPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKS  202 (312)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEEC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEe
Confidence            556667899999999999999999887   5  9999999999999865432 22222221111              11


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +..++|+|++++.++..+......|..+.
T Consensus       203 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~n  231 (312)
T 3ko8_A          203 YLYVRDAVEATLAAWKKFEEMDAPFLALN  231 (312)
T ss_dssp             EEEHHHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred             eEEHHHHHHHHHHHHHhccccCCCCcEEE
Confidence            34589999999999854222233454444

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.86  E-value=1.1e-20  Score=172.16  Aligned_cols=207  Identities=17%  Similarity=0.133  Sum_probs=145.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|+||++++++|+++|++|++++|+.+..+..    .    ..++.++.+|+++.+++.++++       ++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~~~~~~~~~-------~~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDHAGLERALR-------GL   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCHHHHHHHHc-------CC
Confidence            4899999999999999999999999999999987543221    1    2368899999999988877765       68


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||...    .+.+++.+.+++|+.++.++++++.+.-         .++||++||...+...+...   ..++.
T Consensus        79 d~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~---------~~~~v~~SS~~~~~~~~~~~---~~~E~  142 (342)
T 2x4g_A           79 DGVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQAR---------VPRILYVGSAYAMPRHPQGL---PGHEG  142 (342)
T ss_dssp             SEEEEC----------------CHHHHHHHHHHHHHHHHHHHT---------CSCEEEECCGGGSCCCTTSS---CBCTT
T ss_pred             CEEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHcC---------CCeEEEECCHHhhCcCCCCC---CCCCC
Confidence            99999999643    2345778899999999999999998741         46999999998876433210   11222


Q ss_pred             CCCCc----cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc-cC-ch-hHHHHHHHH------hhhhc
Q 020927          190 SGYNR----FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF-RN-IS-FFSGLVGLL------GKYVI  256 (319)
Q Consensus       190 ~~~~~----~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~-~~-~~-~~~~~~~~~------~~~~~  256 (319)
                      ....+    ...|+.+|.+.+.+++.++.   . |  ++++.+.||.+.++.. .. .. +...+....      ....+
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNV  216 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEE
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcce
Confidence            33334    67899999999999988876   2 6  8999999999998865 21 21 111111110      11124


Q ss_pred             CCHHHHHHHHHHHhcCC
Q 020927          257 KNVEQGAATTCYVALHP  273 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~  273 (319)
                      ..++|+|++++.++..+
T Consensus       217 i~v~Dva~~~~~~~~~~  233 (342)
T 2x4g_A          217 IDAAEAGRGLLMALERG  233 (342)
T ss_dssp             EEHHHHHHHHHHHHHHS
T ss_pred             eeHHHHHHHHHHHHhCC
Confidence            58999999999999533

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=2.4e-21  Score=170.96  Aligned_cols=193  Identities=19%  Similarity=0.120  Sum_probs=148.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .|++|||||+|+||++++++|+++|++|++++|+.....           ..++.++.+|+++++++.++++       +
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------C
Confidence            368999999999999999999999999999999864210           1357889999999999888775       6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+||||||..      +.+.+...+++|+.++.++++++.+.         ..++||++||...+...+..   ..+.+
T Consensus        64 ~d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~~---~~~~E  125 (267)
T 3ay3_A           64 CDGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL---------GKPRIVFASSNHTIGYYPRT---TRIDT  125 (267)
T ss_dssp             CSEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT---------TCCEEEEEEEGGGSTTSBTT---SCBCT
T ss_pred             CCEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCHHHhCCCCCC---CCCCC
Confidence            89999999974      23567889999999999999988652         25699999998877543321   12233


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHH
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  267 (319)
                      .....+...|+.+|++.+.+++.++.   ..|  ++++.+.||.+ .++...           -....+.+++|+|+.++
T Consensus       126 ~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~g--i~~~~lrp~~v~~~~~~~-----------~~~~~~~~~~dva~~~~  189 (267)
T 3ay3_A          126 EVPRRPDSLYGLSKCFGEDLASLYYH---KFD--IETLNIRIGSCFPKPKDA-----------RMMATWLSVDDFMRLMK  189 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHH---TTC--CCEEEEEECBCSSSCCSH-----------HHHHHBCCHHHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHH---HcC--CCEEEEeceeecCCCCCC-----------CeeeccccHHHHHHHHH
Confidence            33445567899999999999988764   346  89999999997 444211           01223578999999999


Q ss_pred             HHhcCC
Q 020927          268 YVALHP  273 (319)
Q Consensus       268 ~l~~s~  273 (319)
                      .++..+
T Consensus       190 ~~~~~~  195 (267)
T 3ay3_A          190 RAFVAP  195 (267)
T ss_dssp             HHHHSS
T ss_pred             HHHhCC
Confidence            998644

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=1.7e-20  Score=176.72  Aligned_cols=218  Identities=16%  Similarity=0.125  Sum_probs=148.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHHHHhhCC-------CCceEEEEcCCCCHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA---ACREVKKAIVKEIP-------NAKVQAMELDLSSLASV   95 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~---~~~~~~~~~~~~~~-------~~~v~~~~~Dl~~~~~v   95 (319)
                      ...+++||||||+|+||++++++|++.|++|++++|+.+   ..+...+.+...++       ..++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356789999999999999999999999999999999876   33444443332211       35799999999998887


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927           96 RKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus        96 ~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      .        ..+++|+||||||....     .+.+...+++|+.++.++++++.+   .       ..+||++||... .
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~-----~~~~~~~~~~Nv~g~~~l~~aa~~---~-------~~~~v~~SS~~~-G  201 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV-G  201 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH---T-------TCEEEEEEEGGG-G
T ss_pred             C--------CcCCCCEEEECCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHh---c-------CCcEEEECchHh-C
Confidence            6        45689999999997532     256789999999999999999977   1       459999999887 2


Q ss_pred             CCCC----CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhH
Q 020927          176 SYPE----GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFF  244 (319)
Q Consensus       176 ~~p~----~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~  244 (319)
                      ....    ...+..-+...+..+...|+.+|.+.+.+++.++.    .|  +++++|.||.+-++.....       ..+
T Consensus       202 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~~~~~~~~~~~~  275 (427)
T 4f6c_A          202 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRF  275 (427)
T ss_dssp             SEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSCCCCTTGGGCHH
T ss_pred             CCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCCccccCcchHHH
Confidence            2100    00011111111133567899999999999987653    57  9999999999988764432       112


Q ss_pred             HHHHHHHh------------hhhcCCHHHHHHHHHHHhcCC
Q 020927          245 SGLVGLLG------------KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       245 ~~~~~~~~------------~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ..+.....            ...+.+++|+|+++++++..+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~  316 (427)
T 4f6c_A          276 SMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN  316 (427)
T ss_dssp             HHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCC
Confidence            22222211            112457899999999998533

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.85  E-value=4e-20  Score=172.10  Aligned_cols=189  Identities=17%  Similarity=0.117  Sum_probs=138.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHH-HCCCEEEEEeCCHHH---------HHHHHHHHHhhCC---CCc---eEEEEcCCCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLA-LRGVHVVMAVRNMAA---------CREVKKAIVKEIP---NAK---VQAMELDLSSL   92 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La-~~G~~Vv~~~r~~~~---------~~~~~~~~~~~~~---~~~---v~~~~~Dl~~~   92 (319)
                      +++||||||+|+||++++++|+ ++|++|++++|+...         .+...+.+.....   ..+   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999987543         2333222222211   124   88999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      +++.+++++    ++++|+||||||.....  .+.+++...+++|+.++.++++++...         ..++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLH---------KCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHHh---------CCCEEEEECCHH
Confidence            998888764    44699999999975322  234567889999999999999986432         246999999976


Q ss_pred             cccCCCCC---CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          173 HQFSYPEG---IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       173 ~~~~~p~~---~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      .+...+..   .+...+++.....+...|+.||++.+.+++.++.++   |  ++++++.||.+-++.
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence            55422100   001123333344556789999999999999999887   5  999999999997664

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=3.2e-21  Score=165.22  Aligned_cols=194  Identities=15%  Similarity=0.172  Sum_probs=144.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~~~~i  109 (319)
                      +||||||+|+||++++++|+++|++|++++|+.+..+.          ..++.++.+|+++ ++++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHc-------CC
Confidence            69999999999999999999999999999999764332          1478999999999 888777654       79


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+||||||...          ...+++|+.++..+++++...         ..++||++||..+..+.+..    +    
T Consensus        65 d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~~~---------~~~~iv~~SS~~~~~~~~~~----e----  117 (219)
T 3dqp_A           65 DAIINVSGSGG----------KSLLKVDLYGAVKLMQAAEKA---------EVKRFILLSTIFSLQPEKWI----G----  117 (219)
T ss_dssp             SEEEECCCCTT----------SSCCCCCCHHHHHHHHHHHHT---------TCCEEEEECCTTTTCGGGCC----S----
T ss_pred             CEEEECCcCCC----------CCcEeEeHHHHHHHHHHHHHh---------CCCEEEEECcccccCCCccc----c----
Confidence            99999999743          237889999999998887432         24699999998776532210    0    


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYV  269 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l  269 (319)
                      ....+...|+.+|.+.+.+++      ...|  ++++.+.||.+.++.....-...     .....+.+++|+|+.++++
T Consensus       118 ~~~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~~~~~~~-----~~~~~~i~~~Dva~~i~~~  184 (219)
T 3dqp_A          118 AGFDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEATGLIDIN-----DEVSASNTIGDVADTIKEL  184 (219)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCCSEEEES-----SSCCCCEEHHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCCCccccC-----CCcCCcccHHHHHHHHHHH
Confidence            111235689999999998875      3566  99999999999887543321110     1233356899999999999


Q ss_pred             hcCCCccCCCccccc
Q 020927          270 ALHPHVKGLTGSYFA  284 (319)
Q Consensus       270 ~~s~~~~~~~G~~~~  284 (319)
                      +..+.   ..|+.+.
T Consensus       185 l~~~~---~~g~~~~  196 (219)
T 3dqp_A          185 VMTDH---SIGKVIS  196 (219)
T ss_dssp             HTCGG---GTTEEEE
T ss_pred             HhCcc---ccCcEEE
Confidence            95432   2355444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.85  E-value=1.5e-21  Score=168.04  Aligned_cols=215  Identities=17%  Similarity=0.070  Sum_probs=151.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|+||++++++|+++|++|++++|+++.....         ..++.++.+|+++.+++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999997653221         2578999999999999988876       68


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||....        ....+++|+.++.++++++...         ..+++|++||.......++...     .+
T Consensus        69 d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~~~-----~~  126 (227)
T 3dhn_A           69 DAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA---------GVNRFLMVGGAGSLFIAPGLRL-----MD  126 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT---------TCSEEEEECCSTTSEEETTEEG-----GG
T ss_pred             CEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCChhhccCCCCCcc-----cc
Confidence            999999986411        1237889999999988887553         2459999999887664443211     12


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH---HhhhhcCCHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL---LGKYVIKNVEQGAATT  266 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~va~~i  266 (319)
                      ....+...|+.+|.+.+.+.+.++.   ..|  ++++.+.||.+-++......+.......   -....+..++|+|+++
T Consensus       127 ~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai  201 (227)
T 3dhn_A          127 SGEVPENILPGVKALGEFYLNFLMK---EKE--IDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAM  201 (227)
T ss_dssp             TTCSCGGGHHHHHHHHHHHHHTGGG---CCS--SEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhh---ccC--ccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHH
Confidence            2334567899999999988877665   346  9999999999877643321100000000   0012246899999999


Q ss_pred             HHHhcCCCccCCCcccccCCcccc
Q 020927          267 CYVALHPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~~g~~~  290 (319)
                      +.++.++.   ..|+.+...+..+
T Consensus       202 ~~~l~~~~---~~g~~~~~~~~~~  222 (227)
T 3dhn_A          202 IDELEHPK---HHQERFTIGYLEH  222 (227)
T ss_dssp             HHHHHSCC---CCSEEEEEECCSC
T ss_pred             HHHHhCcc---ccCcEEEEEeehh
Confidence            99996443   2466555444433

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.85  E-value=1.1e-20  Score=159.79  Aligned_cols=198  Identities=14%  Similarity=0.041  Sum_probs=141.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++++++||||+|+||++++++|+++|++|++++|+++.....        ...++.++.+|+++++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            358999999999999999999999999999999997653211        03468899999999998888765       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      .+|++|||+|....      ++   ..++|+.+...+++++...         ..+++|++||...+...+..       
T Consensus        67 ~~d~vi~~a~~~~~------~~---~~~~n~~~~~~~~~~~~~~---------~~~~~v~~Ss~~~~~~~~~~-------  121 (206)
T 1hdo_A           67 GQDAVIVLLGTRND------LS---PTTVMSEGARNIVAAMKAH---------GVDKVVACTSAFLLWDPTKV-------  121 (206)
T ss_dssp             TCSEEEECCCCTTC------CS---CCCHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGTSCTTCS-------
T ss_pred             CCCEEEECccCCCC------CC---ccchHHHHHHHHHHHHHHh---------CCCeEEEEeeeeeccCcccc-------
Confidence            68999999996433      11   1347888888888777643         24699999998766532210       


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                          ..+...|+.+|.+++.+++       ..+  ++++.+.||.+ .++......  ..+ ...+...+.+++|+|+.+
T Consensus       122 ----~~~~~~y~~~K~~~e~~~~-------~~~--i~~~~lrp~~~~~~~~~~~~~--~~~-~~~~~~~~i~~~Dva~~~  185 (206)
T 1hdo_A          122 ----PPRLQAVTDDHIRMHKVLR-------ESG--LKYVAVMPPHIGDQPLTGAYT--VTL-DGRGPSRVISKHDLGHFM  185 (206)
T ss_dssp             ----CGGGHHHHHHHHHHHHHHH-------HTC--SEEEEECCSEEECCCCCSCCE--EES-SSCSSCSEEEHHHHHHHH
T ss_pred             ----cccchhHHHHHHHHHHHHH-------hCC--CCEEEEeCCcccCCCCCcceE--ecc-cCCCCCCccCHHHHHHHH
Confidence                0045789999999998873       246  99999999998 343322211  000 001113456899999999


Q ss_pred             HHHhcCCCccCCCccccc
Q 020927          267 CYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~  284 (319)
                      ++++..+   ..+|+.+.
T Consensus       186 ~~~~~~~---~~~g~~~~  200 (206)
T 1hdo_A          186 LRCLTTD---EYDGHSTY  200 (206)
T ss_dssp             HHTTSCS---TTTTCEEE
T ss_pred             HHHhcCc---ccccccee
Confidence            9999533   24676555

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=2.3e-21  Score=168.19  Aligned_cols=202  Identities=14%  Similarity=0.053  Sum_probs=129.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..|+||||||+|+||++++++|+++| ++|++++|+++.++..        ...++.++.+|+++++++.++++      
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc------
Confidence            35899999999999999999999999 8999999998654321        13478999999999999988876      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       .+|+||||+|..                    .....++.+++.+++.     ..++||++||...+...|...  ...
T Consensus        88 -~~D~vv~~a~~~--------------------~~~~~~~~~~~~~~~~-----~~~~iV~iSS~~~~~~~~~~~--~~~  139 (236)
T 3qvo_A           88 -GQDIVYANLTGE--------------------DLDIQANSVIAAMKAC-----DVKRLIFVLSLGIYDEVPGKF--VEW  139 (236)
T ss_dssp             -TCSEEEEECCST--------------------THHHHHHHHHHHHHHT-----TCCEEEEECCCCC-------------
T ss_pred             -CCCEEEEcCCCC--------------------chhHHHHHHHHHHHHc-----CCCEEEEEecceecCCCCccc--ccc
Confidence             679999999841                    0113456778888764     357999999988776543311  000


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  266 (319)
                      ...........|..+|.           .+...|  |++++|+||++.++..........  ......++.+++|+|+.+
T Consensus       140 ~~~~~~~~~~~~~~~~~-----------~l~~~g--i~~~~vrPg~i~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~i  204 (236)
T 3qvo_A          140 NNAVIGEPLKPFRRAAD-----------AIEASG--LEYTILRPAWLTDEDIIDYELTSR--NEPFKGTIVSRKSVAALI  204 (236)
T ss_dssp             -----CGGGHHHHHHHH-----------HHHTSC--SEEEEEEECEEECCSCCCCEEECT--TSCCSCSEEEHHHHHHHH
T ss_pred             hhhcccchHHHHHHHHH-----------HHHHCC--CCEEEEeCCcccCCCCcceEEecc--CCCCCCcEECHHHHHHHH
Confidence            00001111223333322           223567  999999999998875443211000  001123456899999999


Q ss_pred             HHHhcCCCccCCCcccccCCc
Q 020927          267 CYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ++++. +...++++.+...++
T Consensus       205 ~~ll~-~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          205 TDIID-KPEKHIGENIGINQP  224 (236)
T ss_dssp             HHHHH-STTTTTTEEEEEECS
T ss_pred             HHHHc-CcccccCeeEEecCC
Confidence            99995 555555444433433

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=2.3e-20  Score=169.98  Aligned_cols=212  Identities=16%  Similarity=0.083  Sum_probs=151.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC---C---CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLALR---G---VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~---G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +||||||+|+||++++++|+++   |   ++|++++|+.....  .+.+.......++.++.+|+++++++.+++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcccCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   89999998642100  000111111357899999999998887776     


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                        .++|+|||+||....  ..+.+++...+++|+.++.++++++.+..         .++||++||.+.+...+.    .
T Consensus        75 --~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~---------~~~~v~~SS~~vyg~~~~----~  137 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVYGSIDS----G  137 (337)
T ss_dssp             --TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCCCSS----S
T ss_pred             --cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEecchHHhCCCCC----C
Confidence              389999999996432  12345678899999999999999997752         459999999876643211    1


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------  253 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------  253 (319)
                      .+.+.....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++......+...+......           
T Consensus       138 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (337)
T 1r6d_A          138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA  212 (337)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence            12333345566789999999999999988875   4  8888999999988865322222222222111           


Q ss_pred             --hhcCCHHHHHHHHHHHhc
Q 020927          254 --YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       254 --~~~~~~~~va~~i~~l~~  271 (319)
                        ..+..++|+|++++.++.
T Consensus       213 ~~~~~i~v~Dva~a~~~~~~  232 (337)
T 1r6d_A          213 NVREWVHTDDHCRGIALVLA  232 (337)
T ss_dssp             CEEEEEEHHHHHHHHHHHHH
T ss_pred             eeEeeEeHHHHHHHHHHHHh
Confidence              123478999999999985

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=7.2e-21  Score=209.95  Aligned_cols=175  Identities=19%  Similarity=0.149  Sum_probs=135.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHH---HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAA---CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+|++|||||++|||+++|++|+++|++ |++++|+...   ..+..+++...  +.++.++.+|+++.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999996 8889997543   23444454443  6689999999999999999999987


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      + ++++|+||||||+...  ..+.+.++|++.+++|+.|++++.+.+.+.|.+       .++||++||.++..+.|   
T Consensus      1961 ~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~g~~--- 2029 (2512)
T 2vz8_A         1961 Q-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGRGNA--- 2029 (2512)
T ss_dssp             H-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHTTCT---
T ss_pred             h-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcCCCC---
Confidence            4 7899999999998644  446788999999999999999999999998854       47999999999988655   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI  233 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v  233 (319)
                                  ++..|+++|+++++|++.++.+    |  +...++..|.+
T Consensus      2030 ------------g~~~Y~aaKaal~~l~~~rr~~----G--l~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2030 ------------GQANYGFANSAMERICEKRRHD----G--LPGLAVQWGAI 2063 (2512)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHT----T--SCCCEEEECCB
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHC----C--CcEEEEEccCc
Confidence                        3789999999999999876543    4  55555666554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=6.1e-21  Score=172.50  Aligned_cols=224  Identities=17%  Similarity=0.138  Sum_probs=145.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ||+||||||+|+||++++++|+++|++|+++.| +.+..+.. ..+.. .+  ..++.++.+|+++++++.++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTN-LPGASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHT-STTHHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHh-hhccCCceEEEecCCCCHHHHHHHHc-----
Confidence            689999999999999999999999999999998 65321111 01111 11  1257889999999999888775     


Q ss_pred             CCCccEEEEccccCCCCcccCc-ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          106 GLPLNILINNAGIMATPFMLSK-DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                        .+|+|||+|+..    ..+. +.+.+.+++|+.++.++++++.+..        ..++||++||..+....+....  
T Consensus        74 --~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~--------~~~~iV~~SS~~~~~~~~~~~~--  137 (322)
T 2p4h_X           74 --GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILKACVNSK--------TVKRFIYTSSGSAVSFNGKDKD--  137 (322)
T ss_dssp             --TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS--------SCCEEEEEEEGGGTSCSSSCCS--
T ss_pred             --CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccHHHcccCCCCCe--
Confidence              679999999743    1122 2245689999999999999886531        1469999999886643322100  


Q ss_pred             CCCCCCCC--------Ccc-ccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHH--
Q 020927          185 RINDQSGY--------NRF-SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLL--  251 (319)
Q Consensus       185 ~~~~~~~~--------~~~-~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~--  251 (319)
                      .+++....        .+. ..|+.||.+.+.+++.++.+   .|  ++++++.||.+.+++....  .....+....  
T Consensus       138 ~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g  212 (322)
T 2p4h_X          138 VLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLG  212 (322)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHS
T ss_pred             ecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCCCCCCchHHHHHHHHhC
Confidence            01111000        011 16999999887776655443   46  9999999999999865421  1111111111  


Q ss_pred             -----hhh--hcCCHHHHHHHHHHHhcCCCccCCCcccc
Q 020927          252 -----GKY--VIKNVEQGAATTCYVALHPHVKGLTGSYF  283 (319)
Q Consensus       252 -----~~~--~~~~~~~va~~i~~l~~s~~~~~~~G~~~  283 (319)
                           +..  .+..++|+|+++++++..+   ..+|+|+
T Consensus       213 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~g~~~  248 (322)
T 2p4h_X          213 KKEQIGVTRFHMVHVDDVARAHIYLLENS---VPGGRYN  248 (322)
T ss_dssp             CGGGCCEEEEEEEEHHHHHHHHHHHHHSC---CCCEEEE
T ss_pred             CCccCcCCCcCEEEHHHHHHHHHHHhhCc---CCCCCEE
Confidence                 101  2568999999999998532   2467754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=1.4e-20  Score=169.58  Aligned_cols=209  Identities=20%  Similarity=0.177  Sum_probs=148.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||||+|+||++++++|+++|++|++++|.......       .. ..++.++.+|+++++++.+++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-------~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-------NV-PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-------GS-CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-------hc-ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999999985321110       00 235778899999999999888753     789


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC-CCCCcCcCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY-PEGIRFDRINDQ  189 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~-p~~~~~~~~~~~  189 (319)
                      ++||+|+....  ..+.+++...+++|+.++.++++++...         ..++||++||.++.... +..   ....+.
T Consensus        69 ~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~---------~~~~iv~~SS~~~~~g~~~~~---~~~~E~  134 (311)
T 2p5y_A           69 HVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQY---------GVEKLVFASTGGAIYGEVPEG---ERAEET  134 (311)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT---------TCSEEEEEEEHHHHHCCCCTT---CCBCTT
T ss_pred             EEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEeCCChhhcCCCCCC---CCcCCC
Confidence            99999996432  1234567889999999999999988642         24699999998333221 110   012222


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhh-------------
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGK-------------  253 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~-------------  253 (319)
                      ....+...|+.||++.+.+++.++.++   |  ++++.+.||.+-++.....   .....+......             
T Consensus       135 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (311)
T 2p5y_A          135 WPPRPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPG  209 (311)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTT
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCC
Confidence            233456789999999999999988775   5  8899999999988764321   112222221110             


Q ss_pred             -----hhcCCHHHHHHHHHHHhc
Q 020927          254 -----YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       254 -----~~~~~~~~va~~i~~l~~  271 (319)
                           ..+..++|+|++++.++.
T Consensus       210 ~g~~~~~~i~v~Dva~a~~~~~~  232 (311)
T 2p5y_A          210 DEGCVRDYVYVGDVAEAHALALF  232 (311)
T ss_dssp             SCCCEECEEEHHHHHHHHHHHHH
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHh
Confidence                 123468999999999985

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=7.6e-20  Score=169.44  Aligned_cols=171  Identities=16%  Similarity=0.108  Sum_probs=128.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhhCCCC-ceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-----CREVKKAIVKEIPNA-KVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .|+||||||+|+||.+++++|+++|++|++++|+.+.     ++.....+...  +. ++.++.+|+++.+++.++++.+
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc
Confidence            3789999999999999999999999999999997643     22111111111  22 6889999999999999998876


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||+||....  ..+.+++...+++|+.++.++++++.+...+.    ++.++||++||.+.+.....   
T Consensus       106 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~----~~~~~~v~~SS~~vyg~~~~---  171 (381)
T 1n7h_A          106 -----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGSTPP---  171 (381)
T ss_dssp             -----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTSCS---
T ss_pred             -----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc----CCccEEEEeCcHHHhCCCCC---
Confidence                 78999999997432  12345678899999999999999999976542    12569999999887653221   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK  217 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  217 (319)
                        .+++.....+...|+.+|++.+.+++.++.+++
T Consensus       172 --~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          172 --PQSETTPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             --SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence              233333455677899999999999999988764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.84  E-value=5.3e-20  Score=165.95  Aligned_cols=204  Identities=14%  Similarity=0.099  Sum_probs=147.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+||||||+|+||++++++|+++|..|++..|+....+..         ...+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            4799999999999999999999995555544443322110         3468899999999 88877765       78


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|+...  ...+.+.+...+++|+.++.++++++...         ..++||++||...+.....    ..+.+.
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~iv~~SS~~vyg~~~~----~~~~E~  129 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRKA---------GVSRIVFTSTSTVYGEAKV----IPTPED  129 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEECCGGGGCSCSS----SSBCTT
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEeCchHHhCcCCC----CCCCCC
Confidence            99999999542  23456788999999999999999886543         2569999999887753221    123334


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh--------------hh
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK--------------YV  255 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~  255 (319)
                      ....+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+-++.... .....+......              ..
T Consensus       130 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~  203 (313)
T 3ehe_A          130 YPTHPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEILGNGEQNKS  203 (313)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEESTTSCCEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEeCCCCeEEe
Confidence            455567789999999999999998876   5  899999999998875443 222222221111              12


Q ss_pred             cCCHHHHHHHHHHHhc
Q 020927          256 IKNVEQGAATTCYVAL  271 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~  271 (319)
                      +..++|+|++++.++.
T Consensus       204 ~i~v~Dva~a~~~~~~  219 (313)
T 3ehe_A          204 YIYISDCVDAMLFGLR  219 (313)
T ss_dssp             CEEHHHHHHHHHHHTT
T ss_pred             EEEHHHHHHHHHHHhc
Confidence            3467999999999984

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=2.2e-19  Score=165.54  Aligned_cols=222  Identities=14%  Similarity=0.057  Sum_probs=146.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhC--CCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVKEI--PNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~-~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+....  .+.++.++.+|+++.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999865421 1112221110  1346889999999999999998876   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        ++|+||||||....  ..+.+++...+++|+.++.++++++.+...+      +.++||++||.+.+...+.    ..
T Consensus        78 --~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~iv~~SS~~v~g~~~~----~~  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGLVQE----IP  143 (372)
T ss_dssp             --CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTTCCS----SS
T ss_pred             --CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEeCChhhhCCCCC----CC
Confidence              78999999997543  2345677889999999999999999875422      1379999999877653221    12


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-c--hhHHHHHHHHh----------
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-I--SFFSGLVGLLG----------  252 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~----------  252 (319)
                      +.+.....+...|+.+|++.+.+++.++.++.     +.+..+.|..+-.+.... .  .....+.....          
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  218 (372)
T 1db3_A          144 QKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG  218 (372)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred             CCccCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeec
Confidence            23334445577899999999999999988764     333334444333322111 1  11111211110          


Q ss_pred             ----hhhcCCHHHHHHHHHHHhcC
Q 020927          253 ----KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 ----~~~~~~~~~va~~i~~l~~s  272 (319)
                          ...+..++|+|++++.++..
T Consensus       219 ~~~~~~~~i~v~Dva~a~~~~~~~  242 (372)
T 1db3_A          219 NMDSLRDWGHAKDYVKMQWMMLQQ  242 (372)
T ss_dssp             CTTCEECCEEHHHHHHHHHHTTSS
T ss_pred             CCCceeeeeEHHHHHHHHHHHHhc
Confidence                01235789999999998853

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.84  E-value=4.7e-20  Score=167.92  Aligned_cols=209  Identities=18%  Similarity=0.103  Sum_probs=139.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+++++||||||+|+||++++++|+++|++|++++|+.....+...    .  -.++.++.+|+++.+++.++++..  
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~----~--~~~~~~~~~Dl~d~~~~~~~~~~~--   88 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK----D--HPNLTFVEGSIADHALVNQLIGDL--   88 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC----C--CTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh----h--cCCceEEEEeCCCHHHHHHHHhcc--
Confidence            34567899999999999999999999999999999997532111000    0  136889999999999999888753  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+||||||.....   +.+++.  +++|+.++.++++++.+.         ..++||++||.+.+...|..... 
T Consensus        89 ---~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~---------~~~~iV~~SS~~~~g~~~~~~~~-  150 (333)
T 2q1w_A           89 ---QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN---------NVGRFVYFQTALCYGVKPIQQPV-  150 (333)
T ss_dssp             ---CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT---------TCSEEEEEEEGGGGCSCCCSSSB-
T ss_pred             ---CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCcccCCC-
Confidence               699999999975432   223344  999999999999998762         24699999998766411111000 


Q ss_pred             CCCCCCCCCcc-ccchhhHHHHHHHHHH-HHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHH----------h
Q 020927          185 RINDQSGYNRF-SAYGQSKLANVLHTSE-LARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL----------G  252 (319)
Q Consensus       185 ~~~~~~~~~~~-~~Y~~sK~a~~~~~~~-la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~----------~  252 (319)
                      .+++..  .+. ..|+.+|++.+.+++. ++      .  +  ..+.|+.+-.+. ....+...+....          .
T Consensus       151 ~~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~------~--~--~ilR~~~v~gp~-~~~~~~~~~~~~~~~~~~~~~~~~  217 (333)
T 2q1w_A          151 RLDHPR--NPANSSYAISKSANEDYLEYSGL------D--F--VTFRLANVVGPR-NVSGPLPIFFQRLSEGKKCFVTKA  217 (333)
T ss_dssp             CTTSCC--CCTTCHHHHHHHHHHHHHHHHTC------C--E--EEEEESEEESTT-CCSSHHHHHHHHHHTTCCCEEEEC
T ss_pred             CcCCCC--CCCCCchHHHHHHHHHHHHhhhC------C--e--EEEeeceEECcC-CcCcHHHHHHHHHHcCCeeeCCCc
Confidence            111221  344 7899999999998876 54      1  2  346666665544 1111122222211          1


Q ss_pred             hhhcCCHHHHHHHHHHHhcC
Q 020927          253 KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s  272 (319)
                      ...+..++|+|+++++++..
T Consensus       218 ~~~~i~v~Dva~ai~~~~~~  237 (333)
T 2q1w_A          218 RRDFVFVKDLARATVRAVDG  237 (333)
T ss_dssp             EECEEEHHHHHHHHHHHHTT
T ss_pred             eEeeEEHHHHHHHHHHHHhc
Confidence            12346799999999999953

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.84  E-value=1.2e-20  Score=174.79  Aligned_cols=216  Identities=13%  Similarity=0.031  Sum_probs=148.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++++||||||+|+||++++++|+++| ++|++++|+.......   +.   ...++.++.+|+++++++.++++   
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHHhh---
Confidence            45788999999999999999999999999 9999999976432110   00   13578899999999988766554   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|+|||+||.....  .+.+++...+++|+.++.++++++...        ...++||++||...+...+.    
T Consensus        99 ----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~~V~~SS~~vyg~~~~----  160 (377)
T 2q1s_A           99 ----EYDYVFHLATYHGNQ--SSIHDPLADHENNTLTTLKLYERLKHF--------KRLKKVVYSAAGCSIAEKTF----  160 (377)
T ss_dssp             ----CCSEEEECCCCSCHH--HHHHCHHHHHHHHTHHHHHHHHHHTTC--------SSCCEEEEEEEC------------
T ss_pred             ----CCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEeCCHHHcCCCCC----
Confidence                799999999964321  223567889999999999999887421        02459999999776542211    


Q ss_pred             cCCC--CCC---CC-CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcc---------cC----chhH
Q 020927          184 DRIN--DQS---GY-NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLF---------RN----ISFF  244 (319)
Q Consensus       184 ~~~~--~~~---~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~---------~~----~~~~  244 (319)
                      ..+.  +..   .. .+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++..         ..    ..+.
T Consensus       161 ~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~  235 (377)
T 2q1s_A          161 DDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVT  235 (377)
T ss_dssp             ------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHH
T ss_pred             CCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCcccccccccCcccccccHH
Confidence            0011  111   22 456789999999999999988765   5  8899999999988764         21    1222


Q ss_pred             HHHHHHHhhh-------------hcCCHHHHHHH-HHHHhcC
Q 020927          245 SGLVGLLGKY-------------VIKNVEQGAAT-TCYVALH  272 (319)
Q Consensus       245 ~~~~~~~~~~-------------~~~~~~~va~~-i~~l~~s  272 (319)
                      ..+.......             .+..++|+|++ ++.++..
T Consensus       236 ~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~  277 (377)
T 2q1s_A          236 PTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADG  277 (377)
T ss_dssp             HHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            2232221111             12358999999 9999854

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.83  E-value=4.4e-20  Score=168.77  Aligned_cols=183  Identities=17%  Similarity=0.119  Sum_probs=134.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH------HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA------CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +|+||||||+|+||++++++|+++|++|++++|+...      ..+..+.+.... +.++.++.+|+++.+++.+++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5899999999999999999999999999999875322      112222222211 457889999999999998888753


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||+||.....  .+.+++...+++|+.++.++++++...         ..++||++||.+.+.....   
T Consensus        81 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~~g~~~~---  141 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKAH---------GVKNLVFSSSATVYGNPQY---  141 (348)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCSCSS---
T ss_pred             -----CCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEECcHHHhCCCCC---
Confidence                 799999999964321  133567789999999999999876431         2469999999876643211   


Q ss_pred             CcCCCCCCCCCc-cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          183 FDRINDQSGYNR-FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       183 ~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                       ..+++.....+ ...|+.+|++.+.+++.++.+  ..+  +++..+.|+.+-.+
T Consensus       142 -~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~--~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          142 -LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKT--WNAVLLRYFNPTGA  191 (348)
T ss_dssp             -SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTT--CEEEEEEECEEECC
T ss_pred             -CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCC--cceEEEeeccccCC
Confidence             11222223333 678999999999999999887  334  88888999888665

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-19  Score=167.47  Aligned_cols=221  Identities=14%  Similarity=0.036  Sum_probs=151.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-----CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     ++.....+... ...++.++.+|+++.+++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999997542     11111110000 1346889999999999999998876  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+||||||....  ..+.+++...+++|+.++.++++++.+...+      +.++||++||.+.+...+.    .
T Consensus       102 ---~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~------~~~~iv~~SS~~~~~~~~~----~  166 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHV--KISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKVQE----I  166 (375)
T ss_dssp             ---CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSCSS----S
T ss_pred             ---CCCEEEECCCcccc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCC------ccceEEEecchhhhCCCCC----C
Confidence               78999999996432  1234567889999999999999999775431      1369999999887653221    1


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC-c--hhHHHHHHHHhh--------
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN-I--SFFSGLVGLLGK--------  253 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~--------  253 (319)
                      .+++.....+...|+.+|++.+.+++.++.+++     +.+..+.|+.+-.+.... .  .....+......        
T Consensus       167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (375)
T 1t2a_A          167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL  241 (375)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEE
T ss_pred             CCCccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEe
Confidence            223333445567899999999999999988763     556566666555443211 1  111111111110        


Q ss_pred             ------hhcCCHHHHHHHHHHHhcCC
Q 020927          254 ------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 ------~~~~~~~~va~~i~~l~~s~  273 (319)
                            ..+..++|+|++++.++..+
T Consensus       242 g~~~~~~~~i~v~Dva~a~~~~~~~~  267 (375)
T 1t2a_A          242 GNLDAKRDWGHAKDYVEAMWLMLQND  267 (375)
T ss_dssp             SCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCCCceeeeEEHHHHHHHHHHHHhcC
Confidence                  11346899999999998543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.83  E-value=8.6e-20  Score=168.49  Aligned_cols=226  Identities=10%  Similarity=0.055  Sum_probs=157.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC-CHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS-SLASVRKFASEF  102 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~~i  102 (319)
                      ..|++++||||||+|+||++++++|+++ |++|++++|+.+.......       ..++.++.+|++ +.+++.++++  
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH--
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc--
Confidence            3467899999999999999999999999 8999999998754432211       357999999999 9999888877  


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||+|+.....  ...++..+.+++|+.++.++++++...          +.++|++||...+...+.. .
T Consensus        91 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~v~~SS~~vyg~~~~~-~  152 (372)
T 3slg_A           91 -----KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMCADE-Q  152 (372)
T ss_dssp             -----HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH----------TCEEEEECCGGGGBSCCCS-S
T ss_pred             -----cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEeCcHHHhCCCCCC-C
Confidence                 689999999975432  123455678999999999998888653          1599999997665532221 1


Q ss_pred             CcCCCCCCCC-------CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--------chhHHHH
Q 020927          183 FDRINDQSGY-------NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--------ISFFSGL  247 (319)
Q Consensus       183 ~~~~~~~~~~-------~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--------~~~~~~~  247 (319)
                         +.+....       .+...|+.+|.+.+.+++.++.+    |  ++++.+.|+.+-++....        ..+...+
T Consensus       153 ---~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  223 (372)
T 3slg_A          153 ---FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQF  223 (372)
T ss_dssp             ---BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCCCTTCSBSCSCHHHHHH
T ss_pred             ---CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcccccccccccchHHHHH
Confidence               1111100       24457999999999999887765    6  899999999998775432        1122222


Q ss_pred             HHHHhh-------------hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          248 VGLLGK-------------YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       248 ~~~~~~-------------~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      ...+..             ..+..++|+|++++.++..+. ....|..+.-.+
T Consensus       224 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~  275 (372)
T 3slg_A          224 LGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN-GVATGKIYNIGN  275 (372)
T ss_dssp             HHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECC
T ss_pred             HHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc-CcCCCceEEeCC
Confidence            222111             123478999999999995433 223455555333

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.83  E-value=5.7e-20  Score=165.79  Aligned_cols=198  Identities=14%  Similarity=0.089  Sum_probs=116.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|+||||||+|+||++++++|+++|++|++++|+.+.            ++    ++.+|+++++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHhh-----C
Confidence            6899999999999999999999999999999987543            12    6789999999999888865     7


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+||.....  .+.+++...+++|+.++.++++++.+.          ++++|++||...+....     ..+.+
T Consensus        61 ~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~~~-----~~~~E  123 (315)
T 2ydy_A           61 PHVIVHCAAERRPD--VVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDGTN-----PPYRE  123 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCSSS-----CSBCT
T ss_pred             CCEEEECCcccChh--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCCCC-----CCCCC
Confidence            89999999975432  245678899999999999999999763          24999999988765411     11233


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccC---CcccCchhHHHHH-HH--H-----hhhhcC
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITT---NLFRNISFFSGLV-GL--L-----GKYVIK  257 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t---~~~~~~~~~~~~~-~~--~-----~~~~~~  257 (319)
                      .....+...|+.+|.+.+.+++.++.++.    .+|++.|. |...+   ++...  +..... ..  +     ....+.
T Consensus       124 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~lR~~~v~-G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i  196 (315)
T 2ydy_A          124 EDIPAPLNLYGKTKLDGEKAVLENNLGAA----VLRIPILY-GEVEKLEESAVTV--MFDKVQFSNKSANMDHWQQRFPT  196 (315)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCTTCE----EEEECSEE-CSCSSGGGSTTGG--GHHHHHCCSSCEEEECSSBBCCE
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHhCCCeE----EEeeeeee-CCCCcccccHHHH--HHHHHHhcCCCeeeccCceECcE
Confidence            33344567899999999999988753321    25666555 55544   21111  111111 00  0     112345


Q ss_pred             CHHHHHHHHHHHhc
Q 020927          258 NVEQGAATTCYVAL  271 (319)
Q Consensus       258 ~~~~va~~i~~l~~  271 (319)
                      .++|+|+++++++.
T Consensus       197 ~v~Dva~a~~~~~~  210 (315)
T 2ydy_A          197 HVKDVATVCRQLAE  210 (315)
T ss_dssp             EHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHH
Confidence            78999999999985

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.83  E-value=1e-19  Score=168.74  Aligned_cols=218  Identities=14%  Similarity=0.033  Sum_probs=154.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +..++++||||||+|+||++++++|+++|++|++++|+.......      .  ..++.++.+|+++.+++.++++    
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~----   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE----   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT----
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC----
Confidence            445678999999999999999999999999999999976432110      0  2367889999999999888775    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC-cC
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI-RF  183 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~-~~  183 (319)
                         ++|+|||+||..... ..+.+++...+++|+.++.++++++...         ..++||++||...+....... +.
T Consensus        93 ---~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~---------~~~~~V~~SS~~v~~~~~~~~~~~  159 (379)
T 2c5a_A           93 ---GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN---------GIKRFFYASSACIYPEFKQLETTN  159 (379)
T ss_dssp             ---TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEEEEGGGSCGGGSSSSSS
T ss_pred             ---CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEeehheeCCCCCCCccC
Confidence               789999999975321 1124567889999999999999988642         245999999977654211100 00


Q ss_pred             cCCCCCC--CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHh-----
Q 020927          184 DRINDQS--GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLG-----  252 (319)
Q Consensus       184 ~~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-----  252 (319)
                      ..+.+..  ...+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++.....    .....+.....     
T Consensus       160 ~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (379)
T 2c5a_A          160 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR  234 (379)
T ss_dssp             CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSC
T ss_pred             CCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCc
Confidence            0011111  23346789999999999999988765   5  8999999999988754321    11222222211     


Q ss_pred             ---------hhhcCCHHHHHHHHHHHhcC
Q 020927          253 ---------KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 ---------~~~~~~~~~va~~i~~l~~s  272 (319)
                               ...+..++|+|++++.++..
T Consensus       235 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~  263 (379)
T 2c5a_A          235 FEMWGDGLQTRSFTFIDECVEGVLRLTKS  263 (379)
T ss_dssp             EEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             eEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence                     11234589999999999853

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.82  E-value=5.3e-19  Score=159.30  Aligned_cols=202  Identities=15%  Similarity=0.085  Sum_probs=148.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +++||||||+|+||++++++|+++|++|++++|+.....  .        . ++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--------~-~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I--------N-DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C--------C-ceEEEEcccc-HHHHHHhhc-------C
Confidence            478999999999999999999999999999999843322  1        1 6889999999 888877765       7


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+|+.....      .....+++|+.++.++++++...         ..+++|++||...+...+.    ..+++
T Consensus        63 ~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~---------~~~r~v~~SS~~vyg~~~~----~~~~E  123 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN---------NISNIVYASTISAYSDETS----LPWNE  123 (311)
T ss_dssp             CSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCCGGG----CSBCT
T ss_pred             CCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEEccHHHhCCCCC----CCCCC
Confidence            99999999975432      56778999999999999888542         2458999999766543211    12333


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-------------hh
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-------------YV  255 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------~~  255 (319)
                      .....+...|+.+|.+.+.+++.++.+   .|  ++++.+.||.+-++......+...+......             ..
T Consensus       124 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  198 (311)
T 3m2p_A          124 KELPLPDLMYGVSKLACEHIGNIYSRK---KG--LCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKRE  198 (311)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHHHHHH---SC--CEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEE
T ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHHH---cC--CCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEc
Confidence            444556678999999999999888775   35  8999999999988765432233333333211             12


Q ss_pred             cCCHHHHHHHHHHHhcCC
Q 020927          256 IKNVEQGAATTCYVALHP  273 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~  273 (319)
                      +..++|+|++++.++..+
T Consensus       199 ~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          199 FLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             EEEHHHHHHHHHHHTTCT
T ss_pred             eEEHHHHHHHHHHHHhcC
Confidence            346789999999998533

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=3.8e-19  Score=161.69  Aligned_cols=221  Identities=15%  Similarity=0.040  Sum_probs=153.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ...+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+   ....++.++.+|+++.+++.++++.+  
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~--   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADACSVQRAVIKA--   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCHHHHHHHHHHc--
Confidence            346889999999999999999999999999999999764311 111111   11346889999999999999998876  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+|||+||....  ..+.+++...+++|+.++.++++++.+.-        ..++||++||.+.+...+.    .
T Consensus        86 ---~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--------~~~~~v~~SS~~v~g~~~~----~  148 (335)
T 1rpn_A           86 ---QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFS--------PETRFYQASTSEMFGLIQA----E  148 (335)
T ss_dssp             ---CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHC--------TTSEEEEEEEGGGGCSCSS----S
T ss_pred             ---CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEeCHHHhCCCCC----C
Confidence               78999999996432  12245678899999999999999986541        1269999999877654322    1


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhh--------
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGK--------  253 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~--------  253 (319)
                      .+.+.....+...|+.+|.+.+.+++.++.++   +  +.+..+.|+.+-.+.....   .....+......        
T Consensus       149 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~  223 (335)
T 1rpn_A          149 RQDENTPFYPRSPYGVAKLYGHWITVNYRESF---G--LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRL  223 (335)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEE
T ss_pred             CCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---C--CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEe
Confidence            12333344556789999999999999988776   3  5566678877766543211   111222211111        


Q ss_pred             ------hhcCCHHHHHHHHHHHhcCC
Q 020927          254 ------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 ------~~~~~~~~va~~i~~l~~s~  273 (319)
                            ..+..++|+|++++.++..+
T Consensus       224 g~g~~~~~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          224 GNVDAKRDWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             SCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             CCCcceeceEEHHHHHHHHHHHHhcC
Confidence                  11346799999999998543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.82  E-value=4.3e-20  Score=168.27  Aligned_cols=227  Identities=17%  Similarity=0.103  Sum_probs=145.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH--HHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV--KKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~--~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +|+||||||+|+||++++++|+++|++|+++.|+.+.....  ...+. .  ..++.++.+|+++.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            78999999999999999999999999999998876432211  11221 1  3468889999999988877765      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC-----CC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE-----GI  181 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~-----~~  181 (319)
                       ++|+|||+|+....   ...+...+.+++|+.++.++++++.+..        ..++||++||.++....+.     ..
T Consensus        80 -~~D~Vih~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~--------~v~r~V~~SS~~~~~~~~~~~~~~~~  147 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF---ASEDPENDMIKPAIQGVVNVMKACTRAK--------SVKRVILTSSAAAVTINQLDGTGLVV  147 (338)
T ss_dssp             -TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT--------TCCEEEEECCHHHHHHHHHTCSCCCC
T ss_pred             -CCCEEEEeCCccCC---CCCCcHHHHHHHHHHHHHHHHHHHHHcC--------CcCEEEEEecHHHeecCCcCCCCccc
Confidence             68999999986421   1112234589999999999999987642        1459999999875321110     01


Q ss_pred             cCcC---CCCCCCCC-ccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHH---H---
Q 020927          182 RFDR---INDQSGYN-RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLV---G---  249 (319)
Q Consensus       182 ~~~~---~~~~~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~---~---  249 (319)
                      +.++   ........ ....|+.||.+.+.+++.++.+.   |  +++++|.||.+.++.....  .....+.   .   
T Consensus       148 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  222 (338)
T 2rh8_A          148 DEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE  222 (338)
T ss_dssp             CTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCH
T ss_pred             ChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc
Confidence            1110   00000111 11269999999998887766543   5  8899999999998864321  1111110   0   


Q ss_pred             -HHh---h-------hhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          250 -LLG---K-------YVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       250 -~~~---~-------~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                       .+.   .       ..+..++|+|+++++++..+.   .+|.|+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~  265 (338)
T 2rh8_A          223 FLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES---ASGRYIC  265 (338)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT---CCEEEEE
T ss_pred             cccccccccccccCcccEEEHHHHHHHHHHHHcCCC---cCCcEEE
Confidence             010   0       036789999999999985322   2455544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.82  E-value=4.8e-20  Score=169.33  Aligned_cols=215  Identities=12%  Similarity=0.015  Sum_probs=149.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++++||||||+|+||++++++|+++| ++|++++|+.....  ..    ..++  +. +.+|+++.+.++++++.  
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~----~~~~--~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FV----NLVD--LN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GG----GTTT--SC-CSEEEEHHHHHHHHHTT--
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hh----cccC--ce-EeeecCcHHHHHHHHhh--
Confidence            34678999999999999999999999999 89999999754321  00    1112  22 67899999888877653  


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ..++++|+|||+||....    +.+++...+++|+.++.++++++.+.         .. +||++||...+...+..   
T Consensus       111 ~~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~---------~~-r~V~~SS~~v~g~~~~~---  173 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGGRTSD---  173 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGCSCSSC---
T ss_pred             cccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEcchHHhCCCCCC---
Confidence            235689999999997543    34567889999999999999998763         14 99999998876543221   


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC----chhHHHHHHHH--------
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN----ISFFSGLVGLL--------  251 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~~--------  251 (319)
                       .+++.....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++....    ......+....        
T Consensus       174 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (357)
T 2x6t_A          174 -FIESREYEKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL  247 (357)
T ss_dssp             -CCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEE
T ss_pred             -CcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEE
Confidence             12333334456789999999999998887653   5  888999999998875431    11222222111        


Q ss_pred             -----h-hhhcCCHHHHHHHHHHHhcCC
Q 020927          252 -----G-KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       252 -----~-~~~~~~~~~va~~i~~l~~s~  273 (319)
                           . ...+..++|+|++++.++..+
T Consensus       248 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~  275 (357)
T 2x6t_A          248 FEGSENFKRDFVYVGDVADVNLWFLENG  275 (357)
T ss_dssp             ETTGGGCEECEEEHHHHHHHHHHHHHHC
T ss_pred             eCCCCcceEccEEHHHHHHHHHHHHhcC
Confidence                 0 112457899999999998533

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=2.8e-19  Score=162.16  Aligned_cols=175  Identities=16%  Similarity=0.137  Sum_probs=134.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+||||||+|+||++++++|+++|++|++++|+.....       ... ..++.++.+|+++.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-------DAI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-------GGS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-------hhc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            57999999999999999999999999999998653221       111 22688999999999999888775     379


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||.....  .+.+++...+++|+.++.++++++...         ..+++|++||.+.+.....    ..+++.
T Consensus        69 d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~~~~~~----~~~~E~  133 (330)
T 2c20_A           69 EAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDEF---------KVDKFIFSSTAATYGEVDV----DLITEE  133 (330)
T ss_dssp             EEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGGCSCSS----SSBCTT
T ss_pred             CEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHHc---------CCCEEEEeCCceeeCCCCC----CCCCcC
Confidence            9999999974321  234567889999999999999887532         2469999999876643211    122333


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      ....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++.
T Consensus       134 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          134 TMTNPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCC
Confidence            344556789999999999999888764   5  899999999887764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.82  E-value=4.3e-19  Score=161.79  Aligned_cols=219  Identities=11%  Similarity=0.045  Sum_probs=151.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~~~  107 (319)
                      ++||||||+|+||++++++|+++ |++|++++|+.+..+...       ...++.++.+|+++. +.+.++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 899999999876543211       134789999999984 56666665       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+|||+||...+.  ...+++...+++|+.++.++++++...          .++||++||...+...+...    +.
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~v~g~~~~~~----~~  130 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKY----FD  130 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSS----BC
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEEecHHHcCCCCCCC----cC
Confidence            579999999975331  112456778999999999998887542          25999999987665432210    11


Q ss_pred             CCCC-------CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--------chhHHHHHHHHh
Q 020927          188 DQSG-------YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--------ISFFSGLVGLLG  252 (319)
Q Consensus       188 ~~~~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~  252 (319)
                      +...       ..+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++....        ......+.....
T Consensus       131 e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  205 (345)
T 2bll_A          131 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLV  205 (345)
T ss_dssp             TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHH
T ss_pred             CcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHH
Confidence            1110       1234489999999999999988765   5  888999999998775431        112222222111


Q ss_pred             h-------------hhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          253 K-------------YVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       253 ~-------------~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      .             ..+..++|+|++++.++.. ......|+.+.
T Consensus       206 ~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~g~~~~  249 (345)
T 2bll_A          206 EGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN-AGNRCDGEIIN  249 (345)
T ss_dssp             HTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEE
T ss_pred             cCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh-ccccCCCceEE
Confidence            0             1245789999999999853 22224565554

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.81  E-value=1.2e-18  Score=148.69  Aligned_cols=214  Identities=14%  Similarity=0.131  Sum_probs=129.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|+||++++++|+++|++|++++|+++..+..         ..++.++.+|++++++  +.+       .++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~D~~d~~~--~~~-------~~~   62 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT---------HKDINILQKDIFDLTL--SDL-------SDQ   62 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH---------CSSSEEEECCGGGCCH--HHH-------TTC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc---------cCCCeEEeccccChhh--hhh-------cCC
Confidence            3699999999999999999999999999999998765432         1468899999999887  222       378


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+||||||....           ...+|+.+    .+.+++.+++.     ..+++|++||..++...+...   .....
T Consensus        63 d~vi~~ag~~~~-----------~~~~~~~~----~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~---~~~~~  119 (221)
T 3ew7_A           63 NVVVDAYGISPD-----------EAEKHVTS----LDHLISVLNGT-----VSPRLLVVGGAASLQIDEDGN---TLLES  119 (221)
T ss_dssp             SEEEECCCSSTT-----------TTTSHHHH----HHHHHHHHCSC-----CSSEEEEECCCC-----------------
T ss_pred             CEEEECCcCCcc-----------ccchHHHH----HHHHHHHHHhc-----CCceEEEEecceEEEcCCCCc---ccccc
Confidence            999999997321           13345544    45555555553     367999999988876544311   00111


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHH--H-HHHHHhhhhcCCHHHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFS--G-LVGLLGKYVIKNVEQGAATT  266 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~--~-~~~~~~~~~~~~~~~va~~i  266 (319)
                      ....+...|+.+|.+.+.+. .+..  ...|  ++++.|.||.+.++......+..  . +...-......+++|+|+++
T Consensus       120 ~~~~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  194 (221)
T 3ew7_A          120 KGLREAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAV  194 (221)
T ss_dssp             -----CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCCC---------------------CCCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHH
Confidence            12223466999999998763 2222  1456  89999999999887211111110  0 00001112356899999999


Q ss_pred             HHHhcCCCccCCCcccccCCcccccC
Q 020927          267 CYVALHPHVKGLTGSYFADSNVAQAS  292 (319)
Q Consensus       267 ~~l~~s~~~~~~~G~~~~~~g~~~~~  292 (319)
                      +.++..+.   ..|+.+.-.+..+.+
T Consensus       195 ~~~l~~~~---~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          195 LDEIERPN---HLNEHFTVAGKLEHH  217 (221)
T ss_dssp             HHHHHSCS---CTTSEEECCC-----
T ss_pred             HHHHhCcc---ccCCEEEECCCCccc
Confidence            99996443   246666655554433

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.81  E-value=8.9e-19  Score=167.35  Aligned_cols=215  Identities=17%  Similarity=0.148  Sum_probs=150.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhCC--------------CCceEEEEc
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALR---GVHVVMAVRNMAACREVKKAIVKEIP--------------NAKVQAMEL   87 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~--------------~~~v~~~~~   87 (319)
                      ...++|+||||||+|+||++++++|+++   |++|++++|+.+.... ...+.....              ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4568999999999999999999999999   8999999998664322 222222221              258999999


Q ss_pred             CCC------CHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCC
Q 020927           88 DLS------SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSK  161 (319)
Q Consensus        88 Dl~------~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~  161 (319)
                      |++      +.+++.++++       ++|+||||||....      +.+.+.+++|+.++.++++.+...         .
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~---------~  205 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT---------K  205 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS---------S
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC---------C
Confidence            998      5556666665       68999999997532      567789999999999999887531         2


Q ss_pred             CCeEEEeCCcccccCCCCCCcCcCCCCCCCC-----------CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 020927          162 EGRIVNVSSRRHQFSYPEGIRFDRINDQSGY-----------NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHP  230 (319)
Q Consensus       162 ~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~P  230 (319)
                      .+++|++||.+.+......    .+.++...           .....|+.||.+.+.+++.++.+.   |  ++++.+.|
T Consensus       206 ~~~~V~iSS~~v~~~~~~~----~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ivRp  276 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPS----AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVFRC  276 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTT----TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEEEE
T ss_pred             CCeEEEEeehhhcCccCCC----CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEEEC
Confidence            4589999997655432111    11111111           112459999999999999888764   5  88999999


Q ss_pred             CcccCCcc-----cCchhHHHHHHHHhh---------------------hhcCCHHHHHHHHHHHhc
Q 020927          231 GAITTNLF-----RNISFFSGLVGLLGK---------------------YVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       231 G~v~t~~~-----~~~~~~~~~~~~~~~---------------------~~~~~~~~va~~i~~l~~  271 (319)
                      |.|-++..     ....++..+......                     .-+...+++|++++.++.
T Consensus       277 g~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~  343 (478)
T 4dqv_A          277 GMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGA  343 (478)
T ss_dssp             CEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHH
T ss_pred             ceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHh
Confidence            99976522     112333333322111                     012578999999999985

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=2e-19  Score=161.78  Aligned_cols=211  Identities=13%  Similarity=0.080  Sum_probs=151.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +|+||||||+|+||++++++|+++  |++|++++|+....+     +.     .++.++.+|+++.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            578999999999999999999999  899999999765421     11     14678899999999998888754    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ++|+|||+||.....   ..++....+++|+.++.++++++.+.         ..+++|++||...+...+..   ...
T Consensus        68 -~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~~~~~~~~~---~~~  131 (312)
T 2yy7_A           68 -KITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKAK---------KIKKIFWPSSIAVFGPTTPK---ENT  131 (312)
T ss_dssp             -TCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHTT---------SCSEEECCEEGGGCCTTSCS---SSB
T ss_pred             -CCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEeccHHHhCCCCCC---CCc
Confidence             799999999964321   23567788999999999999888642         24599999998876543221   112


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----h-hHHHHHHHHhh--------
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----S-FFSGLVGLLGK--------  253 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~-~~~~~~~~~~~--------  253 (319)
                      ++.....+...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++.....    . ....+...+..        
T Consensus       132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (312)
T 2yy7_A          132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLS  206 (312)
T ss_dssp             CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSC
T ss_pred             cccCcCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecC
Confidence            222334456789999999999999888765   5  8999999999877542111    1 11112211111        


Q ss_pred             ----hhcCCHHHHHHHHHHHhcCCC
Q 020927          254 ----YVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       254 ----~~~~~~~~va~~i~~l~~s~~  274 (319)
                          ..+..++|+|++++.++..+.
T Consensus       207 ~~~~~~~i~v~Dva~a~~~~~~~~~  231 (312)
T 2yy7_A          207 SETKMPMMYMDDAIDATINIMKAPV  231 (312)
T ss_dssp             TTCCEEEEEHHHHHHHHHHHHHSCG
T ss_pred             CCceeeeeeHHHHHHHHHHHHhCcc
Confidence                112467999999999986443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.81  E-value=5.2e-19  Score=161.54  Aligned_cols=235  Identities=11%  Similarity=0.017  Sum_probs=143.8

Q ss_pred             cccCCCCCCCCCCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceE
Q 020927            4 LSSKGASGFSSSSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQ   83 (319)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~   83 (319)
                      |+++|.--...+|..++... ..+++++||||||+|+||++++++|+++|++|++++|+.........   ......++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~   78 (343)
T 2b69_A            3 SSHHHHHHSSGRENLYFQGH-MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWIGHENFE   78 (343)
T ss_dssp             -------------------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGTTCTTEE
T ss_pred             cccccccccccccccccccc-cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhh---hhccCCceE
Confidence            34444444445555444332 34678999999999999999999999999999999986432111111   111134688


Q ss_pred             EEEcCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCC
Q 020927           84 AMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEG  163 (319)
Q Consensus        84 ~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~  163 (319)
                      ++.+|+.+..            +.++|+|||+||......  ..+++...+++|+.++.++++++...          ..
T Consensus        79 ~~~~D~~~~~------------~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~  134 (343)
T 2b69_A           79 LINHDVVEPL------------YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GA  134 (343)
T ss_dssp             EEECCTTSCC------------CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TC
T ss_pred             EEeCccCChh------------hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----------CC
Confidence            9999998752            457999999999743211  12456788999999999999988653          23


Q ss_pred             eEEEeCCcccccCCCCC-CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--
Q 020927          164 RIVNVSSRRHQFSYPEG-IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--  240 (319)
Q Consensus       164 ~ii~isS~~~~~~~p~~-~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--  240 (319)
                      ++|++||...+...... .+.+.........+...|+.+|.+.+.+++.++.+.   |  ++++.+.||.+-++....  
T Consensus       135 ~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~  209 (343)
T 2b69_A          135 RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMND  209 (343)
T ss_dssp             EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTC
T ss_pred             cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCCCCc
Confidence            99999997765432111 011111111233455679999999999999888765   5  888899999998875432  


Q ss_pred             chhHHHHHHHHh-------------hhhcCCHHHHHHHHHHHhc
Q 020927          241 ISFFSGLVGLLG-------------KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       241 ~~~~~~~~~~~~-------------~~~~~~~~~va~~i~~l~~  271 (319)
                      ......+.....             ...+..++|+|++++.++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  253 (343)
T 2b69_A          210 GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN  253 (343)
T ss_dssp             CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHh
Confidence            112222221111             1123478999999999984

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.80  E-value=1.9e-19  Score=154.32  Aligned_cols=213  Identities=10%  Similarity=-0.048  Sum_probs=138.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||||+|+||++++++|+++|++|++++|+++......        ..++.++.+|++++++  +.       ++++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~-------~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--AD-------LDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hh-------cccCC
Confidence            5999999999999999999999999999999987655331        3578999999999887  22       23789


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      +||||||.....         ....+|+.+..    .+++.+++.      ++++|++||.++....+... ....+...
T Consensus        65 ~vi~~ag~~~~~---------~~~~~n~~~~~----~l~~a~~~~------~~~~v~~SS~~~~~~~~~~~-~~~~~~~~  124 (224)
T 3h2s_A           65 AVVDALSVPWGS---------GRGYLHLDFAT----HLVSLLRNS------DTLAVFILGSASLAMPGADH-PMILDFPE  124 (224)
T ss_dssp             EEEECCCCCTTS---------SCTHHHHHHHH----HHHHTCTTC------CCEEEEECCGGGSBCTTCSS-CGGGGCCG
T ss_pred             EEEECCccCCCc---------chhhHHHHHHH----HHHHHHHHc------CCcEEEEecceeeccCCCCc-cccccCCC
Confidence            999999975211         12455666654    444545443      37999999988776544321 00011111


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH---HHHHHhhhhcCCHHHHHHHHH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG---LVGLLGKYVIKNVEQGAATTC  267 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~va~~i~  267 (319)
                      ...+...|+.+|.+.+.+    .......|  ++++.|.||.+.++..... +...   +...-....+.+++|+|++++
T Consensus       125 ~~~~~~~y~~sK~~~e~~----~~~~~~~~--i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~~~  197 (224)
T 3h2s_A          125 SAASQPWYDGALYQYYEY----QFLQMNAN--VNWIGISPSEAFPSGPATS-YVAGKDTLLVGEDGQSHITTGNMALAIL  197 (224)
T ss_dssp             GGGGSTTHHHHHHHHHHH----HHHTTCTT--SCEEEEEECSBCCCCCCCC-EEEESSBCCCCTTSCCBCCHHHHHHHHH
T ss_pred             CCccchhhHHHHHHHHHH----HHHHhcCC--CcEEEEcCccccCCCcccC-ceecccccccCCCCCceEeHHHHHHHHH
Confidence            111256799999998854    22223567  8999999999987732211 0000   000001123578999999999


Q ss_pred             HHhcCCCccCCCcccccCCcccc
Q 020927          268 YVALHPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       268 ~l~~s~~~~~~~G~~~~~~g~~~  290 (319)
                      .++..+.   ..|+.+.-.+...
T Consensus       198 ~~l~~~~---~~g~~~~~~~~~~  217 (224)
T 3h2s_A          198 DQLEHPT---AIRDRIVVRDADL  217 (224)
T ss_dssp             HHHHSCC---CTTSEEEEEECC-
T ss_pred             HHhcCcc---ccCCEEEEecCcc
Confidence            9996443   2466555444443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=1.8e-20  Score=159.62  Aligned_cols=185  Identities=16%  Similarity=0.063  Sum_probs=138.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++++|||||+|+||++++++|+++|.  +|++++|+++.          .  ..++.++.+|+++++++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            578999999999999999999999998  99999998653          1  346888899999877655443      


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                         +|+||||||....    +.+.+++.+++|+.++..+++++.+.         ..+++|++||...+..         
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~Ss~~~~~~---------  120 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADAK---------  120 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT---------
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc---------CCCEEEEECCcccCCC---------
Confidence               8999999996421    23567888999999999999887653         2458999999876642         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEE-EEEeeCCcccCCcccCchhHHHHH----HHH-hhhhcCCH
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDIT-ANSVHPGAITTNLFRNISFFSGLV----GLL-GKYVIKNV  259 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~-v~~v~PG~v~t~~~~~~~~~~~~~----~~~-~~~~~~~~  259 (319)
                              +...|+.+|.+++.+++.       .|  ++ ++.+.||.+.++.... .+...+.    ... ....+.++
T Consensus       121 --------~~~~y~~sK~~~e~~~~~-------~~--~~~~~~vrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~i~~  182 (215)
T 2a35_A          121 --------SSIFYNRVKGELEQALQE-------QG--WPQLTIARPSLLFGPREEF-RLAEILAAPIARILPGKYHGIEA  182 (215)
T ss_dssp             --------CSSHHHHHHHHHHHHHTT-------SC--CSEEEEEECCSEESTTSCE-EGGGGTTCCCC----CHHHHHHH
T ss_pred             --------CccHHHHHHHHHHHHHHH-------cC--CCeEEEEeCceeeCCCCcc-hHHHHHHHhhhhccCCCcCcEeH
Confidence                    245899999999988754       25  87 9999999998875331 1111100    000 12234578


Q ss_pred             HHHHHHHHHHhcCC
Q 020927          260 EQGAATTCYVALHP  273 (319)
Q Consensus       260 ~~va~~i~~l~~s~  273 (319)
                      +|+|+.++.++..+
T Consensus       183 ~Dva~~~~~~~~~~  196 (215)
T 2a35_A          183 CDLARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.79  E-value=2.2e-18  Score=153.73  Aligned_cols=189  Identities=22%  Similarity=0.234  Sum_probs=137.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ..++||||||+|+||++++++|+++|++|++++|+                       .+|+++.+++.++++++     
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----
Confidence            56899999999999999999999999999999996                       27999999999988865     


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+|||+||....  ..+.+++...+++|+.++.++++++.+.          +.+||++||.+.+...+.    ..+.
T Consensus        63 ~~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----------~~~iv~~SS~~v~~~~~~----~~~~  126 (292)
T 1vl0_A           63 KPNVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDGEAK----EPIT  126 (292)
T ss_dssp             CCSEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCSCCS----SCBC
T ss_pred             CCCEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEechHHeECCCCC----CCCC
Confidence            79999999996432  2234677889999999999999998763          239999999877654321    1122


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh-----------hhhc
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG-----------KYVI  256 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-----------~~~~  256 (319)
                      +.....+...|+.+|.+.+.+++.++.+         +..+.|+.+-++ ...  +...+.....           ...+
T Consensus       127 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---------~~~lR~~~v~G~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  194 (292)
T 1vl0_A          127 EFDEVNPQSAYGKTKLEGENFVKALNPK---------YYIVRTAWLYGD-GNN--FVKTMINLGKTHDELKVVHDQVGTP  194 (292)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHCSS---------EEEEEECSEESS-SSC--HHHHHHHHHHHCSEEEEESSCEECC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHhhCCC---------eEEEeeeeeeCC-CcC--hHHHHHHHHhcCCcEEeecCeeeCC
Confidence            3333445678999999999988775431         344667777655 222  2222222111           1223


Q ss_pred             CCHHHHHHHHHHHhcC
Q 020927          257 KNVEQGAATTCYVALH  272 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s  272 (319)
                      ..++|+|+++++++..
T Consensus       195 i~v~Dva~~~~~~~~~  210 (292)
T 1vl0_A          195 TSTVDLARVVLKVIDE  210 (292)
T ss_dssp             EEHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhc
Confidence            4689999999999953

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.78  E-value=2e-18  Score=171.18  Aligned_cols=224  Identities=11%  Similarity=0.039  Sum_probs=155.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHH-HHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLAS-VRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~i~~  104 (319)
                      +++++||||||+|+||++++++|+++ |++|++++|+.+..+..       ....++.++.+|+++.++ +.++++    
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~v~~Dl~d~~~~~~~~~~----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF-------LNHPHFHFVEGDISIHSEWIEYHVK----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG-------TTCTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh-------ccCCceEEEECCCCCcHHHHHHhhc----
Confidence            46889999999999999999999998 89999999986543221       113578899999999765 555554    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+|||+||.....  ...+++...+++|+.++.++++++...          .+++|++||...+...+..    
T Consensus       382 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~r~V~~SS~~vyg~~~~~----  442 (660)
T 1z7e_A          382 ---KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDK----  442 (660)
T ss_dssp             ---HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCSS----
T ss_pred             ---CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh----------CCEEEEEecHHHcCCCCCc----
Confidence               689999999975432  112456788999999999998888642          2599999998776543221    


Q ss_pred             CCCCCCC-------CCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC--------chhHHHHHH
Q 020927          185 RINDQSG-------YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN--------ISFFSGLVG  249 (319)
Q Consensus       185 ~~~~~~~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~  249 (319)
                      .+.+...       ..+...|+.||.+.+.+++.++.+.   |  ++++.+.||.+-++....        ......+..
T Consensus       443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~  517 (660)
T 1z7e_A          443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_dssp             SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH
T ss_pred             ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCccccccccccccchHHHHHH
Confidence            0111110       1234479999999999999988765   5  889999999998876432        112222222


Q ss_pred             HHhh-------------hhcCCHHHHHHHHHHHhcCCCccCCCcccccCC
Q 020927          250 LLGK-------------YVIKNVEQGAATTCYVALHPHVKGLTGSYFADS  286 (319)
Q Consensus       250 ~~~~-------------~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~  286 (319)
                      ....             ..+..++|+|++++.++. ......+|+.+..+
T Consensus       518 ~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~-~~~~~~~g~~~ni~  566 (660)
T 1z7e_A          518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE-NAGNRCDGEIINIG  566 (660)
T ss_dssp             HHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH-CGGGTTTTEEEEEC
T ss_pred             HHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh-CccccCCCeEEEEC
Confidence            1111             113468999999999985 33333456655533

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.78  E-value=2.2e-18  Score=156.91  Aligned_cols=179  Identities=19%  Similarity=0.127  Sum_probs=126.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||||+|+||++++++|+++|++|++++|.........+.+.... +.++.++.+|+++++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            69999999999999999999999999999863221111112222111 346888999999999998887752     699


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      +||||||.....  ...+.....+++|+.++.++++++...         ..++||++||.+.+.....    ..+.+..
T Consensus        76 ~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~iv~~SS~~~~g~~~~----~~~~e~~  140 (338)
T 1udb_A           76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAA---------NVKNFIFSSSATVYGDNPK----IPYVESF  140 (338)
T ss_dssp             EEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCSCCS----SSBCTTS
T ss_pred             EEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHHhc---------CCCeEEEEccHHHhCCCCC----CCcCccc
Confidence            999999964321  122455678999999999998875432         2469999999876542111    1112222


Q ss_pred             CCC-ccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 020927          191 GYN-RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT  234 (319)
Q Consensus       191 ~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~  234 (319)
                      ... +...|+.||++.+.+++.++.+.  .+  +++..+.|+.+-
T Consensus       141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~  181 (338)
T 1udb_A          141 PTGTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPV  181 (338)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceec
Confidence            222 25689999999999999998874  24  777778776553

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=2.4e-18  Score=155.13  Aligned_cols=213  Identities=14%  Similarity=0.157  Sum_probs=146.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +||||||+|+||++++++|+++  |++|++++|+....             .++.++.+|+++++++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999999  78999999875321             14668899999999998887752     7


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+||....   ...+++...+++|+.++.++++++.+.         ..+++|++||...+...+..   ....+
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~~v~~SS~~~~~~~~~~---~~~~e  127 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH---------RVEKVVIPSTIGVFGPETPK---NKVPS  127 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEEEEGGGCCTTSCS---SSBCS
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc---------CCCEEEEecCHHHhCCCCCC---CCccc
Confidence            9999999996432   123567788999999999999988652         24599999998877542111   11222


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc-cCCcccC---chhH-HHHHHHHhh----------
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI-TTNLFRN---ISFF-SGLVGLLGK----------  253 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v-~t~~~~~---~~~~-~~~~~~~~~----------  253 (319)
                      .....+...|+.+|.+.+.+++.++.++   |  ++++.+.|+.+ .+.....   ..+. ..+...+..          
T Consensus       128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (317)
T 3ajr_A          128 ITITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPN  202 (317)
T ss_dssp             SSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTT
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCcc
Confidence            2334456789999999999998887654   5  88888875544 3322111   1111 111111111          


Q ss_pred             --hhcCCHHHHHHHHHHHhcCCCccCCCcc
Q 020927          254 --YVIKNVEQGAATTCYVALHPHVKGLTGS  281 (319)
Q Consensus       254 --~~~~~~~~va~~i~~l~~s~~~~~~~G~  281 (319)
                        ..+..++|+|++++.++..+.....+|.
T Consensus       203 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~  232 (317)
T 3ajr_A          203 RALPMMYMPDALKALVDLYEADRDKLVLRN  232 (317)
T ss_dssp             CCEEEEEHHHHHHHHHHHHHCCGGGCSSCS
T ss_pred             ceeeeeEHHHHHHHHHHHHhCCccccccCc
Confidence              1123579999999999865543333333

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.77  E-value=2.1e-18  Score=172.07  Aligned_cols=193  Identities=17%  Similarity=0.123  Sum_probs=134.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.+++|+||||||+|+||++++++|+++|++|++++|+........+.+.... ..++.++.+|+++++++.+++++. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-
Confidence            456789999999999999999999999999999999986543222222222111 346888999999999998888753 


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|+|||+||.....  ...+...+.+++|+.++.++++++...         ..++||++||.+.+...+...+.
T Consensus        84 ----~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~---------~~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQY---------NVSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             ----CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHH---------TCCEEEEEEEGGGGCCGGGSTTC
T ss_pred             ----CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCEEEEECcHHHhCCCcccccc
Confidence                799999999975321  112334568999999999998776542         24699999998765421100001


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      ..+.+.....+...|+.+|++++.+++.++.+. ..+  +++..+.|+.+-.+
T Consensus       149 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~  198 (699)
T 1z45_A          149 IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGA  198 (699)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECC
T ss_pred             CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCC
Confidence            112233334456789999999999999988775 346  88888998877554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.77  E-value=2.3e-18  Score=151.85  Aligned_cols=188  Identities=16%  Similarity=0.124  Sum_probs=135.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++|||||+|+||++++++|++ |++|++++|+++. .          ++     +.+|+++++++.++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q----------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T----------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C----------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            699999999999999999995 8999999998631 0          12     789999999999998876     799


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      +||||||....  ..+.++++..+++|+.++.++++++.+.          +++||++||...+.+.+.     .+.+..
T Consensus        60 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~iv~~SS~~~~~~~~~-----~~~e~~  122 (273)
T 2ggs_A           60 VIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKVI----------DSYIVHISTDYVFDGEKG-----NYKEED  122 (273)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEEEEGGGSCSSSC-----SBCTTS
T ss_pred             EEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHHh----------CCeEEEEecceeEcCCCC-----CcCCCC
Confidence            99999997532  2234678899999999999999998641          349999999988764332     122233


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh----------hhhcCCHH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG----------KYVIKNVE  260 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~  260 (319)
                      ...+...|+.+|++.+.+++.    +....  +|++.|. |  .+++      ...+.....          ...+..++
T Consensus       123 ~~~~~~~Y~~sK~~~e~~~~~----~~~~~--iR~~~v~-G--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (273)
T 2ggs_A          123 IPNPINYYGLSKLLGETFALQ----DDSLI--IRTSGIF-R--NKGF------PIYVYKTLKEGKTVFAFKGYYSPISAR  187 (273)
T ss_dssp             CCCCSSHHHHHHHHHHHHHCC----TTCEE--EEECCCB-S--SSSH------HHHHHHHHHTTCCEEEESCEECCCBHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhC----CCeEE--Eeccccc-c--ccHH------HHHHHHHHHcCCCEEeecCCCCceEHH
Confidence            344567899999999998876    22222  5655555 4  2221      111111111          22356899


Q ss_pred             HHHHHHHHHhcC
Q 020927          261 QGAATTCYVALH  272 (319)
Q Consensus       261 ~va~~i~~l~~s  272 (319)
                      |+|+++++++..
T Consensus       188 dva~~i~~~~~~  199 (273)
T 2ggs_A          188 KLASAILELLEL  199 (273)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999953

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.77  E-value=1.3e-17  Score=150.65  Aligned_cols=200  Identities=14%  Similarity=0.093  Sum_probs=144.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++++||||||+|+||++++++|+++|++|++++|+.                      .+|+++.+++.+++++.     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            468999999999999999999999999999988862                      26999999999888765     


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+|||+||..... ....++....+++|+.++.++++++...         ..+++|++||...+......    .+.
T Consensus        55 ~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~v~~SS~~vyg~~~~~----~~~  120 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN---------DVNKLLFLGSSCIYPKLAKQ----PMA  120 (321)
T ss_dssp             CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCCEEEEECCGGGSCTTCCS----SBC
T ss_pred             CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh---------CCCeEEEEccHHHcCCCCCC----CcC
Confidence            799999999974321 1123456788999999999999888652         14599999998776532111    111


Q ss_pred             CCC----CCCc-cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhh-----
Q 020927          188 DQS----GYNR-FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGK-----  253 (319)
Q Consensus       188 ~~~----~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-----  253 (319)
                      +..    ...+ ...|+.+|.+.+.+++.++.++   |  ++++.+.||.+-++.....    .+...+...+..     
T Consensus       121 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g  195 (321)
T 1e6u_A          121 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQK  195 (321)
T ss_dssp             GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcC
Confidence            111    1223 3589999999999999888765   5  8999999999988754311    222222222110     


Q ss_pred             -------------hhcCCHHHHHHHHHHHhcCC
Q 020927          254 -------------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 -------------~~~~~~~~va~~i~~l~~s~  273 (319)
                                   ..+..++|+|++++.++..+
T Consensus       196 ~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~  228 (321)
T 1e6u_A          196 APDVVVWGSGTPMREFLHVDDMAAASIHVMELA  228 (321)
T ss_dssp             CSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred             CCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCc
Confidence                         11237899999999998644

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.77  E-value=3.2e-18  Score=152.27  Aligned_cols=189  Identities=16%  Similarity=0.146  Sum_probs=140.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||+|+||++++++|+++|++|++++|.                       .+|+++.+++.++++++     ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CC
Confidence            389999999999999999999999999999992                       27999999999998876     79


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||....  ....+.+...+++|+.++.++++++.+.          +.++|++||...+...+.    ..+.+.
T Consensus        58 d~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~~~~----~~~~E~  121 (287)
T 3sc6_A           58 HIIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQGDRP----EGYDEF  121 (287)
T ss_dssp             SEEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCCCCS----SCBCTT
T ss_pred             CEEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCCCCC----CCCCCC
Confidence            999999997542  2233678889999999999999988653          338999999876643221    123344


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------hhcCC
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------YVIKN  258 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~  258 (319)
                      ....+...|+.+|.+.+.+++.++.         .+..+.|+.+-++....  +...+......           ..+..
T Consensus       122 ~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (287)
T 3sc6_A          122 HNPAPINIYGASKYAGEQFVKELHN---------KYFIVRTSWLYGKYGNN--FVKTMIRLGKEREEISVVADQIGSPTY  190 (287)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC--HHHHHHHHHTTCSEEEEECSCEECCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHhCC---------CcEEEeeeeecCCCCCc--HHHHHHHHHHcCCCeEeecCcccCceE
Confidence            4455677899999999998876543         13568899887764332  22333322211           11235


Q ss_pred             HHHHHHHHHHHhcCC
Q 020927          259 VEQGAATTCYVALHP  273 (319)
Q Consensus       259 ~~~va~~i~~l~~s~  273 (319)
                      ++|+|++++.++..+
T Consensus       191 v~Dva~~~~~~~~~~  205 (287)
T 3sc6_A          191 VADLNVMINKLIHTS  205 (287)
T ss_dssp             HHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHhCC
Confidence            899999999999543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.75  E-value=8.3e-19  Score=158.16  Aligned_cols=210  Identities=16%  Similarity=0.012  Sum_probs=140.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ++++++||||||+|+||++++++|+++|++|++++|+..........+.......++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            35689999999999999999999999999999999976410000000000001123445555554               


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        ++|+|||+||.....  ...+.....++ |+.++.++++++...-         .+++|++||...+...+.    ..
T Consensus        69 --~~d~vi~~a~~~~~~--~~~~~~~~~~~-n~~~~~~ll~a~~~~~---------v~~~v~~SS~~v~~~~~~----~~  130 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP--RSFKQPLDYLD-NVDSGRHLLALCTSVG---------VPKVVVGSTCEVYGQADT----LP  130 (321)
T ss_dssp             --TEEEEEECCCCCCHH--HHTTSTTTTHH-HHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCSS----SS
T ss_pred             --cCCEEEECCccCChH--HHHhCHHHHHH-HHHHHHHHHHHHHHcC---------CCeEEEecCHHHhCCCCC----CC
Confidence              789999999975431  12234455677 9999999998886542         359999999887654322    12


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcE-EEEEeeCCcccCCcccCchhHHHHHHHHhh-----------
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDI-TANSVHPGAITTNLFRNISFFSGLVGLLGK-----------  253 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------  253 (319)
                      +.+.....+...|+.+|.+.+.+++.++.+.   |  + +++.+.|+.+-++......+...+......           
T Consensus       131 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (321)
T 3vps_A          131 TPEDSPLSPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE  205 (321)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC
Confidence            3344455567889999999999998887753   5  7 888999999988765432223333222211           


Q ss_pred             --hhcCCHHHHHHHHHHHhcCC
Q 020927          254 --YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 --~~~~~~~~va~~i~~l~~s~  273 (319)
                        ..+..++|+|++++.++..+
T Consensus       206 ~~~~~v~v~Dva~~~~~~~~~~  227 (321)
T 3vps_A          206 QRRDFTYITDVVDKLVALANRP  227 (321)
T ss_dssp             CEECEEEHHHHHHHHHHGGGSC
T ss_pred             ceEceEEHHHHHHHHHHHHhcC
Confidence              11247899999999999543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.75  E-value=1.3e-17  Score=149.71  Aligned_cols=205  Identities=14%  Similarity=0.039  Sum_probs=141.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.+++++||||||+|+||++++++|+++|+      +.             ......+.++.+|+++.+++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-------------~~~~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LP-------------GEDWVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-------------TCEEEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-------------cccccccCceecccCCHHHHHHHHhhc--
Confidence            457889999999999999999999999997      10             000123445578999999999888753  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         ++|+|||+|+.... ...+.+.....+++|+.++.++++++...         ..+++|++||...+...+..    
T Consensus        61 ---~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~a~~~~---------~~~~~v~~SS~~vyg~~~~~----  123 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLHSAFEV---------GARKVVSCLSTCIFPDKTTY----  123 (319)
T ss_dssp             ---CCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHHHHHHT---------TCSEEEEECCGGGSCSSCCS----
T ss_pred             ---CCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHHHHHHc---------CCCeEEEEcchhhcCCCCCC----
Confidence               69999999997432 11234566788999999999999887543         14599999998766432211    


Q ss_pred             CCCCCC----CCCccc-cchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHH----H
Q 020927          185 RINDQS----GYNRFS-AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGL----L  251 (319)
Q Consensus       185 ~~~~~~----~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~----~  251 (319)
                      .+++..    ...+.. .|+.+|.+.+.+++.++.+.   |  ++++.+.|+.+-++.....    .....+...    .
T Consensus       124 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  198 (319)
T 4b8w_A          124 PIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAK  198 (319)
T ss_dssp             SBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHH
T ss_pred             CccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHh
Confidence            111111    122223 59999999999999888765   5  8899999999987754321    111122211    1


Q ss_pred             hh-------------hhcCCHHHHHHHHHHHhcC
Q 020927          252 GK-------------YVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 ~~-------------~~~~~~~~va~~i~~l~~s  272 (319)
                      ..             ..+..++|+|++++.++..
T Consensus       199 ~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  232 (319)
T 4b8w_A          199 SSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLRE  232 (319)
T ss_dssp             HHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             ccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence            11             1124789999999999854

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.74  E-value=9.9e-18  Score=150.43  Aligned_cols=209  Identities=12%  Similarity=0.018  Sum_probs=145.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +||||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|+++.+.+.++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999998754321  01111    1  22 678999988877766521  12369


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+||....    +.+++...+++|+.++.++++++.+.         .. ++|++||...+...+..    .+++.
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~---------~~-~~v~~SS~~v~g~~~~~----~~~E~  131 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER---------EI-PFLYASSAATYGGRTSD----FIESR  131 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH---------TC-CEEEEEEGGGGTTCCSC----BCSSG
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeeHHHhCCCCCC----CCCCC
Confidence            999999997543    34567889999999999999988653         14 99999998766532211    12233


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccC----chhHHHHHHH---------Hh----
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN----ISFFSGLVGL---------LG----  252 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~---------~~----  252 (319)
                      ....+...|+.+|.+.+.+++.++.+   .|  ++++.+.||.+-++....    ..+...+...         ..    
T Consensus       132 ~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  206 (310)
T 1eq2_A          132 EYEKPLNVYGYSKFLFDEYVRQILPE---AN--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN  206 (310)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGG---CS--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC------------
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cC--CCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCc
Confidence            33445678999999999999887765   35  889999999998875431    1111111111         11    


Q ss_pred             -hhhcCCHHHHHHHHHHHhcCC
Q 020927          253 -KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       253 -~~~~~~~~~va~~i~~l~~s~  273 (319)
                       ...+..++|+|++++.++..+
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~  228 (310)
T 1eq2_A          207 FKRDFVYVGDVADVNLWFLENG  228 (310)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHC
T ss_pred             ceEccEEHHHHHHHHHHHHhcC
Confidence             122357899999999998543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.73  E-value=9.1e-18  Score=150.10  Aligned_cols=189  Identities=16%  Similarity=0.091  Sum_probs=138.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      +||||||+|+||++++++|+ +|++|++++|+..                   ++.+|+++.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999999751                   3568999999999888765     689


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||+||.....  .+.+++...+++|+.++.++++++..    .      +.++|++||...+...+.    ..+.+..
T Consensus        57 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~------~~~~v~~SS~~vy~~~~~----~~~~E~~  120 (299)
T 1n2s_A           57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----T------GAWVVHYSTDYVFPGTGD----IPWQETD  120 (299)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----T------TCEEEEEEEGGGSCCCTT----CCBCTTS
T ss_pred             EEEECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEEecccEEeCCCC----CCCCCCC
Confidence            999999964321  23456788899999999999988743    1      238999999877654322    1123333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------hhcCCH
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------YVIKNV  259 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~  259 (319)
                      ...+...|+.+|.+.+.+++.++.         +++.+.||.+-++...+  +...+......           ..+..+
T Consensus       121 ~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v  189 (299)
T 1n2s_A          121 ATSPLNVYGKTKLAGEKALQDNCP---------KHLIFRTSWVYAGKGNN--FAKTMLRLAKERQTLSVINDQYGAPTGA  189 (299)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC--HHHHHHHHHHHCSEEEEECSCEECCEEH
T ss_pred             CCCCccHHHHHHHHHHHHHHHhCC---------CeEEEeeeeecCCCcCc--HHHHHHHHHhcCCCEEeecCcccCCeeH
Confidence            445567899999999988876532         35668999998875432  22222222111           112348


Q ss_pred             HHHHHHHHHHhc
Q 020927          260 EQGAATTCYVAL  271 (319)
Q Consensus       260 ~~va~~i~~l~~  271 (319)
                      +|+|++++.++.
T Consensus       190 ~Dva~~~~~~~~  201 (299)
T 1n2s_A          190 ELLADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999985

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.73  E-value=5.2e-17  Score=156.25  Aligned_cols=215  Identities=15%  Similarity=0.101  Sum_probs=145.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHHHhh-------CCCCceEEEEcCCCCHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA---CREVKKAIVKE-------IPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~---~~~~~~~~~~~-------~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      .++||||||+|+||.+++++|.+.|++|++++|+...   .+...+.+...       ....++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999998763   23333332221       11458999999999987776  


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCC
Q 020927           99 ASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP  178 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p  178 (319)
                            ...++|+|||||+....     ...+...+++|+.++.++++.+..   .       ..++|++||... ....
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~---~-------~~~~v~iSS~~v-G~~~  285 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV-GTYF  285 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT---T-------TCEEEEEEESCT-TSEE
T ss_pred             ------CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh---C-------CCcEEEeCChhh-ccCC
Confidence                  34589999999997532     245678899999999999998865   1       459999999876 2110


Q ss_pred             CC-CcCcCCCCCC---CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhHHHH
Q 020927          179 EG-IRFDRINDQS---GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFFSGL  247 (319)
Q Consensus       179 ~~-~~~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~~~~  247 (319)
                      .. ..-..+.+..   +..+...|+.+|.+.+.+++.++.    .|  ++++.+.||.+-++.....       ..+..+
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  359 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV  359 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSCCCCTTCTTCHHHHH
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCCcccCCcchHHHHHH
Confidence            00 0000011111   122567899999999998877543    57  9999999999987754332       112233


Q ss_pred             HHHHhh------------hhcCCHHHHHHHHHHHhcCC
Q 020927          248 VGLLGK------------YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       248 ~~~~~~------------~~~~~~~~va~~i~~l~~s~  273 (319)
                      ......            ..+.+++++|+++++++..+
T Consensus       360 i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~  397 (508)
T 4f6l_B          360 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN  397 (508)
T ss_dssp             HHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBC
T ss_pred             HHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCC
Confidence            322211            11346899999999999543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.72  E-value=4.7e-17  Score=144.60  Aligned_cols=187  Identities=14%  Similarity=0.077  Sum_probs=134.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      |+||||||+|+||++++++|+++  |++|++++|+.+..+...        ..++.++.+|+++++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            57999999999999999999999  999999999876544322        1257889999999988887765       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|++||+|+..  .     +   .  ++|+.++.++++++...         ..++||++||......           
T Consensus        66 ~~d~vi~~a~~~--~-----~---~--~~n~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~~~-----------  113 (287)
T 2jl1_A           66 GVSKLLFISGPH--Y-----D---N--TLLIVQHANVVKAARDA---------GVKHIAYTGYAFAEES-----------  113 (287)
T ss_dssp             TCSEEEECCCCC--S-----C---H--HHHHHHHHHHHHHHHHT---------TCSEEEEEEETTGGGC-----------
T ss_pred             cCCEEEEcCCCC--c-----C---c--hHHHHHHHHHHHHHHHc---------CCCEEEEECCCCCCCC-----------
Confidence            689999999952  1     1   1  57888888888777432         2459999999776421           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----H----hhhhcCCH
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----L----GKYVIKNV  259 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~----~~~~~~~~  259 (319)
                             ...|+.+|.+.+.+++.       .|  ++++.+.||.+.++....  +.......    .    ....+..+
T Consensus       114 -------~~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~  175 (287)
T 2jl1_A          114 -------IIPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFFVNE--GLRASTESGAIVTNAGSGIVNSVTR  175 (287)
T ss_dssp             -------CSTHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHHSSG--GGHHHHHHTEEEESCTTCCBCCBCH
T ss_pred             -------CCchHHHHHHHHHHHHH-------cC--CCeEEEECCEeccccchh--hHHHHhhCCceeccCCCCccCccCH
Confidence                   23799999999988742       46  888899999987764221  12222111    0    11234689


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      +|+|++++.++..+.   ..|+.+.
T Consensus       176 ~Dva~~~~~~~~~~~---~~g~~~~  197 (287)
T 2jl1_A          176 NELALAAATVLTEEG---HENKTYN  197 (287)
T ss_dssp             HHHHHHHHHHHTSSS---CTTEEEE
T ss_pred             HHHHHHHHHHhcCCC---CCCcEEE
Confidence            999999999995332   2465444

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.69  E-value=5.4e-18  Score=150.87  Aligned_cols=194  Identities=16%  Similarity=0.040  Sum_probs=135.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++++||||| +|+||++++++|+++|++|++++|+.+.+            ..++.++.+|+++.+++.++++      
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------
Confidence            3467899999 59999999999999999999999986541            3568899999999988877655      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +++|+|||+||..       .......+++|+.++.++++++..    .     ..+++|++||...+...++    ..+
T Consensus        62 ~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~~----~-----~~~~~v~~SS~~vyg~~~~----~~~  121 (286)
T 3gpi_A           62 LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALEG----A-----PLQHVFFVSSTGVYGQEVE----EWL  121 (286)
T ss_dssp             GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTTT----S-----CCCEEEEEEEGGGCCCCCS----SEE
T ss_pred             CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHhh----C-----CCCEEEEEcccEEEcCCCC----CCC
Confidence            2699999999952       245677889999999988887752    1     2469999999876653221    112


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH-H-----hhhhcCCHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL-L-----GKYVIKNVE  260 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-~-----~~~~~~~~~  260 (319)
                      .+.....+...|+.+|.+.+.+ +..          ++++.+.||.+-++....  +...+... .     ....+..++
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~  188 (286)
T 3gpi_A          122 DEDTPPIAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRLR--MIRQAQTPEQWPARNAWTNRIHRD  188 (286)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBCH--HHHHTTCGGGSCSSBCEECEEEHH
T ss_pred             CCCCCCCCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCchh--HHHHHHhcccCCCcCceeEEEEHH
Confidence            3344455667899999998876 432          346678999988765431  12221110 0     011234689


Q ss_pred             HHHHHHHHHhcC
Q 020927          261 QGAATTCYVALH  272 (319)
Q Consensus       261 ~va~~i~~l~~s  272 (319)
                      |+|++++.++..
T Consensus       189 Dva~~~~~~~~~  200 (286)
T 3gpi_A          189 DGAAFIAYLIQQ  200 (286)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999999964

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.68  E-value=1e-16  Score=142.22  Aligned_cols=183  Identities=15%  Similarity=0.104  Sum_probs=126.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +||||||+|+||++++++|+++  |++|++++|+++..+...        ..++.++.+|+++++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            4899999999999999999999  999999999876544321        1257889999999988877765       6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|++||+||...              ..|+.+..++++++...         ..++||++||...+.   .         
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~~~~---------~~~~~v~~Ss~~~~~---~---------  110 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAAKAA---------GVKFIAYTSLLHADT---S---------  110 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHHHHH---------TCCEEEEEEETTTTT---C---------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHHHHc---------CCCEEEEECCCCCCC---C---------
Confidence            899999999520              13566666666665432         246999999976641   1         


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----H----hhhhcCCHH
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----L----GKYVIKNVE  260 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~----~~~~~~~~~  260 (319)
                            ...|+.+|.+.+.+++.       .|  ++++.+.||++.++....   .......    .    ....+..++
T Consensus       111 ------~~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~  172 (286)
T 2zcu_A          111 ------PLGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENYLAS---APAALEHGVFIGAAGDGKIASATRA  172 (286)
T ss_dssp             ------CSTTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHHHTT---HHHHHHHTEEEESCTTCCBCCBCHH
T ss_pred             ------cchhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhhHHH---hHHhhcCCceeccCCCCccccccHH
Confidence                  24799999999988753       35  899999999987764321   1111111    0    112346899


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      |+|++++.++..+.   .+|+.+.
T Consensus       173 Dva~~~~~~~~~~~---~~g~~~~  193 (286)
T 2zcu_A          173 DYAAAAARVISEAG---HEGKVYE  193 (286)
T ss_dssp             HHHHHHHHHHHSSS---CTTCEEE
T ss_pred             HHHHHHHHHhcCCC---CCCceEE
Confidence            99999999995432   2455444

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.64  E-value=3.7e-16  Score=139.03  Aligned_cols=179  Identities=16%  Similarity=0.137  Sum_probs=119.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +||||||+|+||++++++|++. |++|++++|+++.....      .  ..++.++.+|+++++++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~--~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------W--RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------G--BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------h--hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5999999999999999999998 89999999998654321      1  3478999999999998887765       78


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||++|.....            ..|+.+...+    ++.+++.     .-++||++||......             
T Consensus        67 d~vi~~a~~~~~~------------~~~~~~~~~l----~~aa~~~-----gv~~iv~~Ss~~~~~~-------------  112 (289)
T 3e48_A           67 DTVVFIPSIIHPS------------FKRIPEVENL----VYAAKQS-----GVAHIIFIGYYADQHN-------------  112 (289)
T ss_dssp             SEEEECCCCCCSH------------HHHHHHHHHH----HHHHHHT-----TCCEEEEEEESCCSTT-------------
T ss_pred             CEEEEeCCCCccc------------hhhHHHHHHH----HHHHHHc-----CCCEEEEEcccCCCCC-------------
Confidence            9999999964221            1244444444    4444443     2469999999653321             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----Hh----hhhcCCHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----LG----KYVIKNVEQ  261 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~----~~~~~~~~~  261 (319)
                            ..|..++...     .+...+...|  ++++.+.||.+.+++..   +.......    .+    ...+.+++|
T Consensus       113 ------~~~~~~~~~~-----~~e~~~~~~g--~~~~ilrp~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~D  176 (289)
T 3e48_A          113 ------NPFHMSPYFG-----YASRLLSTSG--IDYTYVRMAMYMDPLKP---YLPELMNMHKLIYPAGDGRINYITRND  176 (289)
T ss_dssp             ------CCSTTHHHHH-----HHHHHHHHHC--CEEEEEEECEESTTHHH---HHHHHHHHTEECCCCTTCEEEEECHHH
T ss_pred             ------CCCccchhHH-----HHHHHHHHcC--CCEEEEeccccccccHH---HHHHHHHCCCEecCCCCceeeeEEHHH
Confidence                  2233333221     2223334557  99999999999887532   12222111    01    111458999


Q ss_pred             HHHHHHHHhcCCC
Q 020927          262 GAATTCYVALHPH  274 (319)
Q Consensus       262 va~~i~~l~~s~~  274 (319)
                      +|+.++.++..+.
T Consensus       177 va~~~~~~l~~~~  189 (289)
T 3e48_A          177 IARGVIAIIKNPD  189 (289)
T ss_dssp             HHHHHHHHHHCGG
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999996443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.64  E-value=2.1e-15  Score=137.81  Aligned_cols=191  Identities=13%  Similarity=0.004  Sum_probs=128.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH----HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM----AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      |+.++||||||||+||++++++|+++|++|++++|+.    ++.+. ...+.    ..++.++.+|+++.+++.+++++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCHHHHHHHHhhC
Confidence            4467899999999999999999999999999999976    33322 22222    346899999999999999888763


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||++|.                 .|+.+..++++++...-        .-.++|+ |+ .+..       
T Consensus        83 -----~~d~Vi~~a~~-----------------~n~~~~~~l~~aa~~~g--------~v~~~v~-S~-~g~~-------  123 (346)
T 3i6i_A           83 -----EIDIVVSTVGG-----------------ESILDQIALVKAMKAVG--------TIKRFLP-SE-FGHD-------  123 (346)
T ss_dssp             -----TCCEEEECCCG-----------------GGGGGHHHHHHHHHHHC--------CCSEEEC-SC-CSSC-------
T ss_pred             -----CCCEEEECCch-----------------hhHHHHHHHHHHHHHcC--------CceEEee-cc-cCCC-------
Confidence                 79999999996                 17778878887775532        1336664 33 2211       


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHH------H----HHHh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGL------V----GLLG  252 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~------~----~~~~  252 (319)
                         .+......+...|+.+|.+++.+.+.       .|  +.+..+.||.+-+............      .    ..-.
T Consensus       124 ---~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~  191 (346)
T 3i6i_A          124 ---VNRADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV  191 (346)
T ss_dssp             ---TTTCCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCC
T ss_pred             ---CCccCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEecccccccCccccccccccCCCceEEEccCCCc
Confidence               11122234567899999998877754       45  7788899998877554332110000      0    0001


Q ss_pred             hhhcCCHHHHHHHHHHHhcCC
Q 020927          253 KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ...+..++|+|+.++.++..+
T Consensus       192 ~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          192 KAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             CEEEECHHHHHHHHHHHTTCG
T ss_pred             eEEecCHHHHHHHHHHHHhCc
Confidence            223568999999999999543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.63  E-value=1.7e-15  Score=134.53  Aligned_cols=190  Identities=11%  Similarity=0.012  Sum_probs=127.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++|||||| |+||++++++|+++|++|++++|+.+......        ..++.++.+|+++.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--------ASGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--------HTTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--------hCCCeEEEecccccc------------cCCC
Confidence            68999998 99999999999999999999999987654432        236899999999932            4489


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |+|||+|+.....     +.              ..+.++..+.+..   ....++|++||...+...+.    ..+++.
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~---~~~~~~v~~Ss~~vyg~~~~----~~~~E~  118 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARA---AQFRWVGYLSTTAVYGDHDG----AWVDET  118 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTG---GGCSEEEEEEEGGGGCCCTT----CEECTT
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhc---CCceEEEEeecceecCCCCC----CCcCCC
Confidence            9999999964321     00              1233344443310   02469999999876643221    113334


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH-H----HHHHhhhhcCCHHHHHH
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG-L----VGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~-~----~~~~~~~~~~~~~~va~  264 (319)
                      ....+...|+.+|.+.+.+++.+      .|  ++++.+.||.+-++....+..... .    ...-....+..++|+|+
T Consensus       119 ~~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  190 (286)
T 3ius_A          119 TPLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQ  190 (286)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHH
Confidence            44556678999999999888665      45  888899999997764332210000 0    00001122357799999


Q ss_pred             HHHHHhcCCC
Q 020927          265 TTCYVALHPH  274 (319)
Q Consensus       265 ~i~~l~~s~~  274 (319)
                      +++.++..+.
T Consensus       191 a~~~~~~~~~  200 (286)
T 3ius_A          191 VLAASMARPD  200 (286)
T ss_dssp             HHHHHHHSCC
T ss_pred             HHHHHHhCCC
Confidence            9999996433

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.63  E-value=6.6e-15  Score=135.68  Aligned_cols=172  Identities=16%  Similarity=0.103  Sum_probs=129.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ++||||||+|+||++++++|+++|. +|+.++|+                           .+++++.++++       +
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------H
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------c
Confidence            3699999999999999999999998 77777665                           67778887776       5


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+||....      +.....+++|+.++.++++++..    .    +...++|++||...+.             
T Consensus        47 ~d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~----~----~~~~~~v~~Ss~~~~~-------------   99 (369)
T 3st7_A           47 ADFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTR----N----TKKPAILLSSSIQATQ-------------   99 (369)
T ss_dssp             CSEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTT----C----SSCCEEEEEEEGGGGS-------------
T ss_pred             CCEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHH----h----CCCCeEEEeCchhhcC-------------
Confidence            8999999997532      35677889999999998887742    1    1234899999987664             


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhh------------h
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGK------------Y  254 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~------------~  254 (319)
                            ...|+.+|.+.+.+++.++++.   |  +++..+.|+.+-++.....  .+...+...+..            .
T Consensus       100 ------~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (369)
T 3st7_A          100 ------DNPYGESKLQGEQLLREYAEEY---G--NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVEL  168 (369)
T ss_dssp             ------CSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEE
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHh---C--CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEE
Confidence                  3689999999999999888775   4  6777899999887654321  223333322211            1


Q ss_pred             hcCCHHHHHHHHHHHhcCC
Q 020927          255 VIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~  273 (319)
                      .+..++|+|++++.++..+
T Consensus       169 ~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          169 TLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             EEEEHHHHHHHHHHHHHTC
T ss_pred             EEEEHHHHHHHHHHHHhCC
Confidence            2346899999999999644

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.61  E-value=5.2e-15  Score=135.74  Aligned_cols=187  Identities=16%  Similarity=0.082  Sum_probs=125.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcC-CCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD-LSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~D-l~~~~~v~~~~~~i~~~  105 (319)
                      +.+++||||||+|+||++++++|+++|++|++++|+.+...  .+.+..   ..++.++.+| +++++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-----
Confidence            45788999999999999999999999999999999876542  122221   2368889999 999999888765     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCC-CCeEEEeCCccc-ccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSK-EGRIVNVSSRRH-QFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~-~~~ii~isS~~~-~~~~p~~~~~  183 (319)
                        .+|++|||++...             ...|..+ .++    ++.+.+.     . .++||++||... ....      
T Consensus        73 --~~d~Vi~~a~~~~-------------~~~~~~~-~~l----~~aa~~~-----g~v~~~V~~SS~~~~~~~~------  121 (352)
T 1xgk_A           73 --GAHLAFINTTSQA-------------GDEIAIG-KDL----ADAAKRA-----GTIQHYIYSSMPDHSLYGP------  121 (352)
T ss_dssp             --TCSEEEECCCSTT-------------SCHHHHH-HHH----HHHHHHH-----SCCSEEEEEECCCGGGTSS------
T ss_pred             --cCCEEEEcCCCCC-------------cHHHHHH-HHH----HHHHHHc-----CCccEEEEeCCccccccCC------
Confidence              6899999997531             1234443 444    4444432     2 359999999862 2211      


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhH------HHHH--H----H
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFF------SGLV--G----L  250 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~------~~~~--~----~  250 (319)
                               .....|+.+|.+.+.+++.+       |  ++++.|.||.+-++..... ..+      ....  .    .
T Consensus       122 ---------~~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  183 (352)
T 1xgk_A          122 ---------WPAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDP  183 (352)
T ss_dssp             ---------CCCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCT
T ss_pred             ---------CCCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCchhcccccccccccCCCceEEeeccCC
Confidence                     12357999999999888652       5  7888899998765443211 000      0000  0    0


Q ss_pred             HhhhhcCCH-HHHHHHHHHHhcC
Q 020927          251 LGKYVIKNV-EQGAATTCYVALH  272 (319)
Q Consensus       251 ~~~~~~~~~-~~va~~i~~l~~s  272 (319)
                      -....+..+ +|+|+.++.++..
T Consensus       184 ~~~~~~i~v~~Dva~ai~~~l~~  206 (352)
T 1xgk_A          184 DIPLPWLDAEHDVGPALLQIFKD  206 (352)
T ss_dssp             TSCEEEECHHHHHHHHHHHHHHH
T ss_pred             CCceeeEecHHHHHHHHHHHHhC
Confidence            011123567 8999999999853

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.61  E-value=6.7e-15  Score=131.58  Aligned_cols=190  Identities=13%  Similarity=-0.036  Sum_probs=126.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+||||||+|+||++++++|+++| ++|++++|+++....  ..+.    ...+.++.+|+++++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~----~~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELR----LQGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHH----HTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHH----HCCCEEEEecCCCHHHHHHHHh-------
Confidence            5899999999999999999999999 899999998764321  1222    1257889999999999888776       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|+|||++|.....          ..+.|+.+...++    +.+++.     ..++||++|+.......+         
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~~~~~~~----~aa~~~-----gv~~iv~~S~~~~~~~~~---------  123 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVKQGKLLA----DLARRL-----GLHYVVYSGLENIKKLTA---------  123 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHHHHHHHH----HHHHHH-----TCSEEEECCCCCHHHHTT---------
T ss_pred             cCCEEEEeCCCCccc----------cchHHHHHHHHHH----HHHHHc-----CCCEEEEEcCccccccCC---------
Confidence            689999999853110          1234444444444    444433     256899966644332111         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-h--hHHH------HHHHHhhhhcCC
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-S--FFSG------LVGLLGKYVIKN  258 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~--~~~~------~~~~~~~~~~~~  258 (319)
                          ......|..+|.+++.+++.       .|  ++++.+.||.+.+++...+ .  ....      +...-....+.+
T Consensus       124 ----~~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~  190 (299)
T 2wm3_A          124 ----GRLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMS  190 (299)
T ss_dssp             ----TSCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEEC
T ss_pred             ----CcccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceec
Confidence                01235799999999988754       25  8899999999988754321 0  0000      000001123458


Q ss_pred             HHHHHHHHHHHhcC
Q 020927          259 VEQGAATTCYVALH  272 (319)
Q Consensus       259 ~~~va~~i~~l~~s  272 (319)
                      ++|+|+.++.++..
T Consensus       191 ~~Dva~~~~~~l~~  204 (299)
T 2wm3_A          191 VSDLGPVVLSLLKM  204 (299)
T ss_dssp             GGGHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcC
Confidence            99999999999853

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.58  E-value=9.8e-15  Score=130.78  Aligned_cols=186  Identities=13%  Similarity=0.071  Sum_probs=119.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-------HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-------AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +++|+||||+|+||++++++|+++|++|++++|+.       ++.+.. +.+.    ...+.++.+|+++++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~----~~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQ----SLGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHH----HTTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHH----hCCCEEEEeCCCCHHHHHHHHh-
Confidence            57899999999999999999999999999999986       444332 2222    2358889999999998888776 


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                            ++|+|||++|...                 +.+...+++++    ++.    +.-+++|  .|..+...  .. 
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~----g~v~~~v--~S~~g~~~--~~-  119 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQVKIIKAI----KEA----GNVKKFF--PSEFGLDV--DR-  119 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHHHHHHHH----HHH----CCCSEEE--CSCCSSCT--TS-
T ss_pred             ------CCCEEEECCcccc-----------------cccHHHHHHHH----Hhc----CCceEEe--ecccccCc--cc-
Confidence                  6899999999632                 23344455444    332    0134776  23332211  00 


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH------HHHH----HHH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF------SGLV----GLL  251 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~------~~~~----~~~  251 (319)
                            ..........| .+|.+++.+++.       .|  ++++.+.||++.+++.......      ....    ..-
T Consensus       120 ------~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (307)
T 2gas_A          120 ------HDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGN  183 (307)
T ss_dssp             ------CCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSC
T ss_pred             ------ccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeeccccccccccccccCCCCeEEEecCCC
Confidence                  00011124578 999998877653       25  7788899999988654322100      0000    000


Q ss_pred             hhhhcCCHHHHHHHHHHHhcC
Q 020927          252 GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s  272 (319)
                      ....+.+++|+|+.++.++..
T Consensus       184 ~~~~~i~~~Dva~~~~~~l~~  204 (307)
T 2gas_A          184 VKGAYVTEADVGTFTIRAAND  204 (307)
T ss_dssp             SEEEEECHHHHHHHHHHHHTC
T ss_pred             cceEEeeHHHHHHHHHHHHcC
Confidence            122346899999999999953

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.55  E-value=5e-14  Score=129.09  Aligned_cols=173  Identities=12%  Similarity=0.043  Sum_probs=116.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC-----CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG-----VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +|+||||||+|+||++++++|+++|     ++|++++|+.....         ....++.++.+|+++.+++.++++.+ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~-   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPL-   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcC-
Confidence            5789999999999999999999999     89999999764322         11346889999999999887776532 


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEE-------EeCCcccccC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIV-------NVSSRRHQFS  176 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii-------~isS~~~~~~  176 (319)
                         +++|++||+||...       ++....+++|+.++.++++++.+...       +-.++|       ++||...+..
T Consensus        71 ---~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~-------~~~~~v~~~g~~i~~Ss~~vyg~  133 (364)
T 2v6g_A           71 ---TDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCP-------NLKHISLQTGRKHYMGPFESYGK  133 (364)
T ss_dssp             ---TTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCT-------TCCEEEEECCTHHHHCCGGGTTT
T ss_pred             ---CCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhcc-------ccceEEeccCceEEEechhhccc
Confidence               24999999999642       35678899999999999998865421       134676       6888765543


Q ss_pred             CC-CCCcCcCCCCCCCCCc-cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCccc
Q 020927          177 YP-EGIRFDRINDQSGYNR-FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR  239 (319)
Q Consensus       177 ~p-~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~  239 (319)
                      .+ ...   .+.+.....+ ...|    .+.+.+++.++.+.  .+  +.+..+.|+.+-.+...
T Consensus       134 ~~~~~~---~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~--~~--~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          134 IESHDP---PYTEDLPRLKYMNFY----YDLEDIMLEEVEKK--EG--LTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             SCCCCS---SBCTTSCCCSSCCHH----HHHHHHHHHHHTTS--TT--CEEEEEEESSEECCCTT
T ss_pred             cccCCC---CCCccccCCccchhh----HHHHHHHHHHhhcC--CC--ceEEEECCCceeCCCCC
Confidence            21 000   1112211111 2345    23344444333221  13  88889999999876543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.55  E-value=2.7e-14  Score=137.57  Aligned_cols=198  Identities=14%  Similarity=0.060  Sum_probs=132.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +++||||||+|+||.+++++|+++|++|++++|+....                ..+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCC
Confidence            67999999999999999999999999999999986431                12567876431         223458


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+||..... ..+.+.....+++|+.++.++++++..   ..     ..++||++||.+.+...+..   ..+.+
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~-----~~~r~V~~SS~~vyg~~~~~---~~~~E  269 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---ST-----QCTTMISASAVGFYGHDRGD---EILTE  269 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CS-----SCCEEEEEEEGGGGCSEEEE---EEECT
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cC-----CCCEEEEeCcceEecCCCCC---CccCC
Confidence            99999999975332 334566778999999999999997442   11     25699999997766411110   01122


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh------------hhc
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK------------YVI  256 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------~~~  256 (319)
                      .... +...|+.+|...+.+..    .....|  ++++.+.||.+-++...   ....+...+..            ..+
T Consensus       270 ~~~~-~~~~y~~~~~~~E~~~~----~~~~~g--i~~~ilRp~~v~Gp~~~---~~~~~~~~~~~g~~~~~g~g~~~~~~  339 (516)
T 3oh8_A          270 ESES-GDDFLAEVCRDWEHATA----PASDAG--KRVAFIRTGVALSGRGG---MLPLLKTLFSTGLGGKFGDGTSWFSW  339 (516)
T ss_dssp             TSCC-CSSHHHHHHHHHHHTTH----HHHHTT--CEEEEEEECEEEBTTBS---HHHHHHHTTC---CCCCTTSCCEECE
T ss_pred             CCCC-CcChHHHHHHHHHHHHH----HHHhCC--CCEEEEEeeEEECCCCC---hHHHHHHHHHhCCCcccCCCCceEce
Confidence            2222 45568888887776543    234567  99999999999887521   22222222111            123


Q ss_pred             CCHHHHHHHHHHHhcCC
Q 020927          257 KNVEQGAATTCYVALHP  273 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~  273 (319)
                      ..++|+|++++.++..+
T Consensus       340 i~v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          340 IAIDDLTDIYYRAIVDA  356 (516)
T ss_dssp             EEHHHHHHHHHHHHHCT
T ss_pred             EeHHHHHHHHHHHHhCc
Confidence            46899999999999644

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.52  E-value=3.9e-14  Score=127.23  Aligned_cols=191  Identities=10%  Similarity=0.034  Sum_probs=120.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-----AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++|+||||+|+||++++++|+++|++|++++|+.     ++.+.. ..+.    ..++.++.+|+++++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999983     333222 2221    3468899999999999888775   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|+|||++|.....             .|+.+...+++++.    +.    +.-+++|+ |+ .+..  +..   
T Consensus        76 ----~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa~----~~----g~v~~~v~-S~-~g~~--~~~---  123 (313)
T 1qyd_A           76 ----QVDVVISALAGGVLS-------------HHILEQLKLVEAIK----EA----GNIKRFLP-SE-FGMD--PDI---  123 (313)
T ss_dssp             ----TCSEEEECCCCSSSS-------------TTTTTHHHHHHHHH----HS----CCCSEEEC-SC-CSSC--TTS---
T ss_pred             ----CCCEEEECCccccch-------------hhHHHHHHHHHHHH----hc----CCCceEEe-cC-CcCC--ccc---
Confidence                689999999964321             25556666665553    22    11347774 33 2211  110   


Q ss_pred             cCCCCCCCC-CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh-------HHHHHHH----H
Q 020927          184 DRINDQSGY-NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF-------FSGLVGL----L  251 (319)
Q Consensus       184 ~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~----~  251 (319)
                        .  .... .....| .+|.+++.+.+.       .|  +.++.+.||++.+++......       .......    -
T Consensus       124 --~--~~~~~p~~~~y-~sK~~~e~~~~~-------~g--~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  189 (313)
T 1qyd_A          124 --M--EHALQPGSITF-IDKRKVRRAIEA-------AS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGN  189 (313)
T ss_dssp             --C--CCCCSSTTHHH-HHHHHHHHHHHH-------TT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSC
T ss_pred             --c--ccCCCCCcchH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccccCCCCeEEEeCCCC
Confidence              0  0111 124568 999998877642       35  777778999886543221100       0000000    0


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCC
Q 020927          252 GKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ....+..++|+|+.++.++..+
T Consensus       190 ~~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          190 VKGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             SEEEEECHHHHHHHHHHHTTCG
T ss_pred             ceEEEEEHHHHHHHHHHHHhCc
Confidence            1223468999999999998543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.48  E-value=6.6e-14  Score=126.31  Aligned_cols=186  Identities=13%  Similarity=0.068  Sum_probs=115.6

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM------AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++|+||||+|+||++++++|+++|++|++++|+.      +..+ ....+.    ...+.++.+|+++++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~l~~~~----~~~v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQ-LREEFR----SMGVTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHH-HHHHHH----HTTCEEEECCTTCHHHHHHHHT--
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHH-HHHHhh----cCCcEEEEecCCCHHHHHHHHc--
Confidence            46799999999999999999999999999999985      2222 222222    2358899999999999888776  


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||++|...                 +.+...+++++    .+.+    .-++||  .|..+...  .   
T Consensus        77 -----~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g----~v~~~v--~S~~g~~~--~---  119 (321)
T 3c1o_A           77 -----QVDIVISALPFPM-----------------ISSQIHIINAI----KAAG----NIKRFL--PSDFGCEE--D---  119 (321)
T ss_dssp             -----TCSEEEECCCGGG-----------------SGGGHHHHHHH----HHHC----CCCEEE--CSCCSSCG--G---
T ss_pred             -----CCCEEEECCCccc-----------------hhhHHHHHHHH----HHhC----CccEEe--ccccccCc--c---
Confidence                 6899999999631                 22333444444    3320    134776  23332110  0   


Q ss_pred             CcCCCCCCCCCc-cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh------HHH----HHHHH
Q 020927          183 FDRINDQSGYNR-FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF------FSG----LVGLL  251 (319)
Q Consensus       183 ~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~------~~~----~~~~~  251 (319)
                           ......+ ...| .+|.+++.+++.       .|  +.+..|.||.+.++.......      ...    +...-
T Consensus       120 -----~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (321)
T 3c1o_A          120 -----RIKPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGE  184 (321)
T ss_dssp             -----GCCCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSC
T ss_pred             -----ccccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccccccccccccccccccCceEEecCCC
Confidence                 0001111 4578 999999887753       24  666678899876543211000      000    00000


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCC
Q 020927          252 GKYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~  273 (319)
                      ....+.+++|+|+.++.++..+
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~~  206 (321)
T 3c1o_A          185 TKFVLNYEEDIAKYTIKVACDP  206 (321)
T ss_dssp             CEEEEECHHHHHHHHHHHHHCG
T ss_pred             cceeEeeHHHHHHHHHHHHhCc
Confidence            1223468999999999999643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.41  E-value=1.9e-12  Score=115.87  Aligned_cols=185  Identities=12%  Similarity=0.096  Sum_probs=115.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM------AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++|+||||+|+||++++++|+++|++|++++|+.      ++.+. .+.+.    ...+.++.+|+++++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~~~l~----~~~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL-LESFK----ASGANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHH-HHHHH----TTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHH-HHHHH----hCCCEEEEeccCCHHHHHHHHc--
Confidence            46799999999999999999999999999999973      22221 12221    3468899999999999888876  


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           ++|+|||+++...                 +.+...+++++    ++.+    .-+++|+ |+ .+..  +.   
T Consensus        77 -----~~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g----~v~~~v~-S~-~g~~--~~---  119 (308)
T 1qyc_A           77 -----NVDVVISTVGSLQ-----------------IESQVNIIKAI----KEVG----TVKRFFP-SE-FGND--VD---  119 (308)
T ss_dssp             -----TCSEEEECCCGGG-----------------SGGGHHHHHHH----HHHC----CCSEEEC-SC-CSSC--TT---
T ss_pred             -----CCCEEEECCcchh-----------------hhhHHHHHHHH----HhcC----CCceEee-cc-cccC--cc---
Confidence                 6899999999531                 22333444444    3321    1347763 33 2211  10   


Q ss_pred             CcCCCCCCCC-CccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH------H-HH---HHHH
Q 020927          183 FDRINDQSGY-NRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF------S-GL---VGLL  251 (319)
Q Consensus       183 ~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~------~-~~---~~~~  251 (319)
                           ..... .....| .+|.+++.+++.       .|  +.+..+.||++.++........      . ..   ...-
T Consensus       120 -----~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (308)
T 1qyc_A          120 -----NVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGN  184 (308)
T ss_dssp             -----SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSC
T ss_pred             -----ccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccCCCCCceEEecCCC
Confidence                 00111 123568 999998877753       24  6667788998765432211000      0 00   0000


Q ss_pred             hhhhcCCHHHHHHHHHHHhcC
Q 020927          252 GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s  272 (319)
                      ....+.+++|+|+.++.++..
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~  205 (308)
T 1qyc_A          185 ARVVFVKEEDIGTFTIKAVDD  205 (308)
T ss_dssp             CEEEEECHHHHHHHHHTTSSC
T ss_pred             ceEEEecHHHHHHHHHHHHhC
Confidence            122345789999999999853

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.39  E-value=1.4e-12  Score=117.56  Aligned_cols=186  Identities=10%  Similarity=0.037  Sum_probs=114.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .++||||||+|+||++++++|+++|++|++++|+.+........+.    ...+.++.+|+++++++.++++       +
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----SLGAIIVKGELDEHEKLVELMK-------K   79 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh----cCCCEEEEecCCCHHHHHHHHc-------C
Confidence            3679999999999999999999999999999998742112222222    2358889999999999888776       6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +|+|||+++...                 +.+...+++++    ++.+    .-+++|+ |+ .+..  +.        .
T Consensus        80 ~d~vi~~a~~~~-----------------~~~~~~l~~aa----~~~g----~v~~~v~-S~-~g~~--~~--------~  122 (318)
T 2r6j_A           80 VDVVISALAFPQ-----------------ILDQFKILEAI----KVAG----NIKRFLP-SD-FGVE--ED--------R  122 (318)
T ss_dssp             CSEEEECCCGGG-----------------STTHHHHHHHH----HHHC----CCCEEEC-SC-CSSC--TT--------T
T ss_pred             CCEEEECCchhh-----------------hHHHHHHHHHH----HhcC----CCCEEEe-ec-cccC--cc--------c
Confidence            899999999531                 22333444443    3321    1347763 33 2211  00        0


Q ss_pred             CCCCCc-cccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-h--HHH----HHHHHhhhhcCCHH
Q 020927          189 QSGYNR-FSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-F--FSG----LVGLLGKYVIKNVE  260 (319)
Q Consensus       189 ~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~--~~~----~~~~~~~~~~~~~~  260 (319)
                      .....+ ...| .+|.+++.+++.       .|  +.+..+.||.+..++..... .  ...    +...-....+..++
T Consensus       123 ~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (318)
T 2r6j_A          123 INALPPFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ  192 (318)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH
T ss_pred             ccCCCCcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH
Confidence            001111 3468 999998877653       35  66777889887654221100 0  000    00000122245789


Q ss_pred             HHHHHHHHHhcC
Q 020927          261 QGAATTCYVALH  272 (319)
Q Consensus       261 ~va~~i~~l~~s  272 (319)
                      |+|+.++.++..
T Consensus       193 Dva~~~~~~l~~  204 (318)
T 2r6j_A          193 DIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcC
Confidence            999999999853

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.38  E-value=9.8e-13  Score=117.17  Aligned_cols=109  Identities=20%  Similarity=0.234  Sum_probs=87.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||++|||||+||+|+++++.|+++|++|++++|+.++++++.+.+...   .++.++.+|+++++++.++++   
T Consensus       114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~---  187 (287)
T 1lu9_A          114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK---  187 (287)
T ss_dssp             TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT---
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH---
Confidence            35688999999999999999999999999999999999998888877777543   136678899999988877665   


Q ss_pred             hcCCCccEEEEccccCCC--Cc-ccCc-ccccchhhhhhhHHH
Q 020927          104 SSGLPLNILINNAGIMAT--PF-MLSK-DNIELQFATNHIGHF  142 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~-~~~~-~~~~~~~~vn~~~~~  142 (319)
                          .+|+||||+|+...  +. +.+. +.+...+++|+.+++
T Consensus       188 ----~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ----GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ----TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ----hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence                47999999986322  11 3343 778888999988876

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.32  E-value=1.3e-11  Score=110.16  Aligned_cols=196  Identities=14%  Similarity=0.073  Sum_probs=118.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||||.||++++++|.++|++|++++|++..              .++.   .|     .+      ..+....+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD-----EL------AASGLPSC   52 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH-----HH------HHHCCCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc-----hh------hHhhccCC
Confidence            369999999999999999999999999999997531              1222   11     11      11234589


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |.+||.||....  ....+.......+++|+.++..+++.+...-       .+..++|+.||...+......    ..+
T Consensus        53 d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-------~~~~~~i~~Ss~~vyg~~~~~----~~~  121 (298)
T 4b4o_A           53 DAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-------QPPKAWVLVTGVAYYQPSLTA----EYD  121 (298)
T ss_dssp             SEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-------SCCSEEEEEEEGGGSCCCSSC----CBC
T ss_pred             CEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-------CCceEEEEEeeeeeecCCCCC----ccc
Confidence            999999985322  2223444455677888888777776654321       124457777776666532221    122


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh------------hh
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK------------YV  255 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------~~  255 (319)
                      ++....+...|+..+...+..     ......+  +++..+.||.+-.+...   ....+......            ..
T Consensus       122 E~~p~~~~~~~~~~~~~~e~~-----~~~~~~~--~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~g~g~~~~~  191 (298)
T 4b4o_A          122 EDSPGGDFDFFSNLVTKWEAA-----ARLPGDS--TRQVVVRSGVVLGRGGG---AMGHMLLPFRLGLGGPIGSGHQFFP  191 (298)
T ss_dssp             TTCCCSCSSHHHHHHHHHHHH-----HCCSSSS--SEEEEEEECEEECTTSH---HHHHHHHHHHTTCCCCBTTSCSBCC
T ss_pred             ccCCccccchhHHHHHHHHHH-----HHhhccC--CceeeeeeeeEEcCCCC---chhHHHHHHhcCCcceecccCceee
Confidence            333344444555555544421     2334556  88889999999876422   12222221111            11


Q ss_pred             cCCHHHHHHHHHHHhcCCC
Q 020927          256 IKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~  274 (319)
                      +...+|+++++++++..+.
T Consensus       192 ~ihv~Dva~a~~~~~~~~~  210 (298)
T 4b4o_A          192 WIHIGDLAGILTHALEANH  210 (298)
T ss_dssp             EEEHHHHHHHHHHHHHCTT
T ss_pred             cCcHHHHHHHHHHHHhCCC
Confidence            2367999999999986443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.05  E-value=3.4e-10  Score=102.59  Aligned_cols=160  Identities=13%  Similarity=0.054  Sum_probs=104.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ++|+||||+|.||..++..|+++|.       .|+++++.+  +..+.....+...  .  +.++ .|+.+.++..+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~--~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--A--FPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--T--CTTE-EEEEEESCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--c--cccc-CCeEeccChHHHhC
Confidence            4799999999999999999999986       799999874  3333322333221  1  1122 46655444444332


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                             .+|++||.||.....    .+...+.+++|+.++..+++++..+- .      .+.+++++|+...... |- 
T Consensus        80 -------~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~-~------~~~~vvv~snp~~~~~-~~-  139 (327)
T 1y7t_A           80 -------DADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA-K------KDVKVLVVGNPANTNA-LI-  139 (327)
T ss_dssp             -------TCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS-C------TTCEEEECSSSHHHHH-HH-
T ss_pred             -------CCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc-C------CCeEEEEeCCchhhhH-HH-
Confidence                   689999999975432    13345689999999999998887652 0      1458888887652110 00 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE  218 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~  218 (319)
                       ..   +...++.+...|+.+|...+.+...++..+.-
T Consensus       140 -~~---~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~  173 (327)
T 1y7t_A          140 -AY---KNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGT  173 (327)
T ss_dssp             -HH---HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             -HH---HHcCCCChhheeccchHHHHHHHHHHHHHhCc
Confidence             00   00002344567999999999988888877653

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.00  E-value=5e-10  Score=95.31  Aligned_cols=79  Identities=23%  Similarity=0.283  Sum_probs=60.8

Q ss_pred             CCCCCEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           26 DGSGLTAIVTGA----------------SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        26 ~l~~k~vlItGa----------------s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      +|+||+||||||                +||||+++|++|+++|++|++++++.. ++         .+. .+  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEcc
Confidence            478999999999                689999999999999999999987642 11         011 22  24688


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMA  120 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~  120 (319)
                      ++.+   ++++.+.+.++++|+||||||+..
T Consensus        72 ~~~~---~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           72 MTAL---EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CSHH---HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CcHH---HHHHHHHHhcCCCCEEEECCcccC
Confidence            7754   455666667889999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.89  E-value=9.8e-09  Score=77.97  Aligned_cols=74  Identities=23%  Similarity=0.237  Sum_probs=62.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+++++|+|+ |++|+++++.|++.| ++|++++|+++..+...        ...+.++.+|+.+.+++.++++      
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc------
Confidence            3578999999 999999999999999 79999999988766543        2356778899999888777654      


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                       .+|++|++++
T Consensus        69 -~~d~vi~~~~   78 (118)
T 3ic5_A           69 -GFDAVISAAP   78 (118)
T ss_dssp             -TCSEEEECSC
T ss_pred             -CCCEEEECCC
Confidence             7899999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.79  E-value=1.6e-08  Score=86.19  Aligned_cols=79  Identities=14%  Similarity=0.268  Sum_probs=58.1

Q ss_pred             CCCEEEEeCC----------------CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           28 SGLTAIVTGA----------------SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        28 ~~k~vlItGa----------------s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      +||+||||||                +|++|+++|++|+++|++|++++|.... ..       .. ...+..  .|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~-~~~~~~--~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EP-HPNLSI--REIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CC-CTTEEE--EECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cC-CCCeEE--EEHh-
Confidence            5899999999                7789999999999999999999987531 00       00 113333  3444 


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMA  120 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~  120 (319)
                        ++.++++.+.+.++++|++|+||++..
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence              456666666667788999999999753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.75  E-value=3.5e-08  Score=82.38  Aligned_cols=103  Identities=12%  Similarity=0.228  Sum_probs=72.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||+++++.+...|++|++++|+++..+...    +.  +...   .+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVEY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCCE---EeeCCcHHHHHHHHHHhC--CC
Confidence            6899999999999999999999999999999999987655432    21  2221   247777654444433221  23


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++|++|+|+|.         +               ..+.+++.++.       .|++|++++..
T Consensus       107 ~~D~vi~~~g~---------~---------------~~~~~~~~l~~-------~G~~v~~g~~~  140 (198)
T 1pqw_A          107 GVDVVLNSLAG---------E---------------AIQRGVQILAP-------GGRFIELGKKD  140 (198)
T ss_dssp             CEEEEEECCCT---------H---------------HHHHHHHTEEE-------EEEEEECSCGG
T ss_pred             CCeEEEECCch---------H---------------HHHHHHHHhcc-------CCEEEEEcCCC
Confidence            69999999982         0               13445555544       67999998855

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.74  E-value=7e-08  Score=89.84  Aligned_cols=82  Identities=22%  Similarity=0.385  Sum_probs=71.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRG---VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|+|+|| |+||+++++.|+++|   ..|++++|+.++++++.+.+.... +.++..+.+|+++.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            47999999 899999999999998   389999999999988888775532 246889999999999999999876    


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                       ++|+||||+|.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.72  E-value=1e-08  Score=82.72  Aligned_cols=77  Identities=13%  Similarity=0.145  Sum_probs=62.8

Q ss_pred             CchhHHHHHHHHHCCCEEEEEeCCHHHHH---HHHHHHHhhCCCCceEEEEcCCCCH--HHHHHHHHHHHhcCCCccEEE
Q 020927           39 SGIGTETARVLALRGVHVVMAVRNMAACR---EVKKAIVKEIPNAKVQAMELDLSSL--ASVRKFASEFKSSGLPLNILI  113 (319)
Q Consensus        39 ~gIG~aia~~La~~G~~Vv~~~r~~~~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~--~~v~~~~~~i~~~~~~id~lv  113 (319)
                      +-++.++++.|++.|++|++..|+.....   +..+.+...  +.++..+.+|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45889999999999999999988654322   123334333  66788999999999  9999999999998989 9999


Q ss_pred             Ecccc
Q 020927          114 NNAGI  118 (319)
Q Consensus       114 ~nag~  118 (319)
                      ||||+
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.59  E-value=1.4e-07  Score=88.99  Aligned_cols=79  Identities=16%  Similarity=0.256  Sum_probs=62.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |++|+|+|+| +|++|+++++.|++.|++|++++|+.++++.+.+.    .  ..+..+.+|+++.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~--~~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----V--QHSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----C--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----c--CCceEEEeecCCHHHHHHHHc------
Confidence            3578999998 79999999999999999999999998766543321    1  236788999999988877664      


Q ss_pred             CCccEEEEccccC
Q 020927          107 LPLNILINNAGIM  119 (319)
Q Consensus       107 ~~id~lv~nag~~  119 (319)
                       .+|+||||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             789999999863

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.56  E-value=5.7e-08  Score=93.39  Aligned_cols=97  Identities=22%  Similarity=0.194  Sum_probs=64.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-  104 (319)
                      ++++|+++|||| ||+|+++++.|++.|++|++++|+.++++++.+.+     +.++..    +.+   +       .+ 
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~~----~~d---l-------~~~  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKALS----LTD---L-------DNY  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CEE----TTT---T-------TTC
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceee----HHH---h-------hhc
Confidence            578999999999 59999999999999999999999998877766554     222221    211   1       11 


Q ss_pred             cCCCccEEEEccccCCC-------CcccCcccccchhhhhhhHHH
Q 020927          105 SGLPLNILINNAGIMAT-------PFMLSKDNIELQFATNHIGHF  142 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~-------~~~~~~~~~~~~~~vn~~~~~  142 (319)
                      ....+|+||||+|+...       ..+.+.+.+...+++|+.+..
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            11358999999997421       122445678889999998763

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.55  E-value=3.9e-08  Score=87.30  Aligned_cols=82  Identities=21%  Similarity=0.255  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|+++||||+ |+|+++++.|++.| +|++++|+.++++++.+.+....... . .+.+|+.+.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~-~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKK-F-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCC-H-HHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccc-c-ceeEEEeeH----------HH
Confidence            46889999999997 99999999999999 99999999988888777664421001 0 112343331          34


Q ss_pred             cCCCccEEEEccccCC
Q 020927          105 SGLPLNILINNAGIMA  120 (319)
Q Consensus       105 ~~~~id~lv~nag~~~  120 (319)
                      .++.+|+||+|+|...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            5678999999999743

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.55  E-value=1.8e-07  Score=84.56  Aligned_cols=79  Identities=19%  Similarity=0.292  Sum_probs=61.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++|||||+||||+++++.+...|++|+++++++++.+.+ +.+     +..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            689999999999999999999999999999999998776654 322     222   23477764455555555543  5


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            8999999999

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.51  E-value=1.6e-07  Score=85.41  Aligned_cols=104  Identities=13%  Similarity=0.102  Sum_probs=74.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||+++++.+...|++|++++|++++.+.. +.+     +..   ..+|+++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEEecCccHhHHHHHHHHhCC--
Confidence            689999999999999999999999999999999988766433 221     322   224877655666666665543  


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++|++|+|+|..                       ..++.+++.++.       .|++|.+++..
T Consensus       238 ~~D~vi~~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~g~~~  272 (347)
T 2hcy_A          238 GAHGVINVSVSE-----------------------AAIEASTRYVRA-------NGTTVLVGMPA  272 (347)
T ss_dssp             CEEEEEECSSCH-----------------------HHHHHHTTSEEE-------EEEEEECCCCT
T ss_pred             CCCEEEECCCcH-----------------------HHHHHHHHHHhc-------CCEEEEEeCCC
Confidence            799999999831                       133444455543       67999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.50  E-value=3.5e-10  Score=106.27  Aligned_cols=47  Identities=19%  Similarity=0.268  Sum_probs=41.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      .+.+.||+++|||++ +||+++|+.|+..|++|+++++++........
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            356899999999998 99999999999999999999999877655443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.50  E-value=1.1e-06  Score=78.71  Aligned_cols=84  Identities=26%  Similarity=0.336  Sum_probs=66.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN---MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ..+++||++||+|| ||+|++++..|++.|+ +|+++.|+   .++++++.+++.... +..+.  ..++.+.+++.+.+
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~--~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQ--LFDIEDHEQLRKEI  224 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEE--EEETTCHHHHHHHH
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceE--EeccchHHHHHhhh
Confidence            46789999999998 6999999999999998 89999999   888888888887654 22333  34666665555544


Q ss_pred             HHHHhcCCCccEEEEcccc
Q 020927          100 SEFKSSGLPLNILINNAGI  118 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~  118 (319)
                      .       ..|+||++.+.
T Consensus       225 ~-------~aDiIINaTp~  236 (315)
T 3tnl_A          225 A-------ESVIFTNATGV  236 (315)
T ss_dssp             H-------TCSEEEECSST
T ss_pred             c-------CCCEEEECccC
Confidence            4       67999999875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.49  E-value=2.1e-07  Score=85.58  Aligned_cols=108  Identities=17%  Similarity=0.205  Sum_probs=74.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+.+++++|+|+ |+||+++++.+...|++|++++|++++++...+.+     +..   +.+|.++.+++.+++.    
T Consensus       162 ~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~----  228 (369)
T 2eez_A          162 PGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ----  228 (369)
T ss_dssp             TBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh----
Confidence            3578899999999 99999999999999999999999988766543322     223   3457778777776654    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                         ..|++|+++|.....   +              +..+.+..++.|++       .++||++++..
T Consensus       229 ---~~DvVi~~~g~~~~~---~--------------~~li~~~~l~~mk~-------gg~iV~v~~~~  269 (369)
T 2eez_A          229 ---HADLLIGAVLVPGAK---A--------------PKLVTRDMLSLMKE-------GAVIVDVAVDQ  269 (369)
T ss_dssp             ---HCSEEEECCC------------------------CCSCHHHHTTSCT-------TCEEEECC---
T ss_pred             ---CCCEEEECCCCCccc---c--------------chhHHHHHHHhhcC-------CCEEEEEecCC
Confidence               579999999963210   0              01234555666643       67899998754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.46  E-value=5e-07  Score=85.37  Aligned_cols=80  Identities=18%  Similarity=0.262  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++++|+|+|| |++|+++++.|++. |++|++++|+.++++.+.+.       ..+..+.+|+.+.+++.++++   
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc---
Confidence            5677899999997 99999999999998 67999999998877655432       135677899999988877665   


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                          ++|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                689999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.32  E-value=1.4e-06  Score=76.62  Aligned_cols=77  Identities=18%  Similarity=0.287  Sum_probs=58.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|+++|+|+ ||+|++++..|++.|.+|++++|+.++++++.+.+...  + .+.  ..|+   +++       .+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------cc
Confidence            5678999999998 69999999999999999999999998887776655321  1 222  2343   111       11


Q ss_pred             cCCCccEEEEccccC
Q 020927          105 SGLPLNILINNAGIM  119 (319)
Q Consensus       105 ~~~~id~lv~nag~~  119 (319)
                        +.+|+||+|+|..
T Consensus       179 --~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 --HEFDLIINATSSG  191 (271)
T ss_dssp             --CCCSEEEECCSCG
T ss_pred             --CCCCEEEECCCCC
Confidence              5899999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.32  E-value=7.7e-07  Score=69.73  Aligned_cols=77  Identities=13%  Similarity=0.061  Sum_probs=57.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +++++++|+|+ |++|+.+++.|.+.|++|++++++++..+...        ......+..|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~--------~~~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT--------TTCSEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhCCEEEEeCCCCHHHHHhc------CC
Confidence            56788999998 99999999999999999999999986654321        11245677899887655432      12


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            378999999883

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.31  E-value=2.7e-06  Score=76.85  Aligned_cols=80  Identities=14%  Similarity=0.205  Sum_probs=59.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||+++++.+...|++|++++|++++.+...+ +     +...   .+|.++.+..+++.+...  ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~~---~~d~~~~~~~~~i~~~~~--~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCHH---TINYSTQDFAEVVREITG--GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHHT--TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCHHHHHHHHHHhC--CC
Confidence            68999999999999999999999999999999999877665432 2     3222   246666554444433321  23


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            79999999993

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.31  E-value=2.6e-06  Score=66.80  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=59.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +.++++|+|+ |.+|+.+++.|.++|++|++++++++..+...+    .    .+.++.+|.++++.+.++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC------Ccc
Confidence            4578999998 779999999999999999999999887665432    1    367788999998876654      234


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ..|++|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899998877

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.30  E-value=1.2e-06  Score=79.59  Aligned_cols=80  Identities=16%  Similarity=0.197  Sum_probs=59.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||++++..+...|++|+++++++++++.+.+.+     +...   .+|.++.+++.+.+.++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFDD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCSE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCce---EEecCCHHHHHHHHHHHhC--C
Confidence            6899999999999999999999999999999999987765543222     3221   2366654445555555432  4


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.30  E-value=2.1e-06  Score=77.37  Aligned_cols=104  Identities=13%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||+++++.+...|++|++++|++++.+...+ +     +...   .+|.++.+..+.+.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~~---~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCccHHHHHHHHhC--CC
Confidence            58999999999999999999999999999999999877665433 2     3222   246666555444433321  23


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ++|++|+|+|.  .                      .++..++.++.       .|+++.+++..+
T Consensus       209 ~~D~vi~~~g~--~----------------------~~~~~~~~l~~-------~G~iv~~g~~~~  243 (327)
T 1qor_A          209 KVRVVYDSVGR--D----------------------TWERSLDCLQR-------RGLMVSFGNSSG  243 (327)
T ss_dssp             CEEEEEECSCG--G----------------------GHHHHHHTEEE-------EEEEEECCCTTC
T ss_pred             CceEEEECCch--H----------------------HHHHHHHHhcC-------CCEEEEEecCCC
Confidence            69999999992  1                      13444555543       679999987543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.28  E-value=2.8e-06  Score=74.97  Aligned_cols=81  Identities=16%  Similarity=0.266  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+....++..+..  .++.+   +.+.+.   
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~--~~~~~---l~~~l~---  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDARG---IEDVIA---  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEE--ECSTT---HHHHHH---
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEE--cCHHH---HHHHHh---
Confidence            4689999999998 7999999999999998 799999999999988888876644444433  34333   333333   


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                          ..|++|++...
T Consensus       194 ----~~DiVInaTp~  204 (283)
T 3jyo_A          194 ----AADGVVNATPM  204 (283)
T ss_dssp             ----HSSEEEECSST
T ss_pred             ----cCCEEEECCCC
Confidence                46999999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.23  E-value=3.8e-06  Score=76.56  Aligned_cols=80  Identities=13%  Similarity=0.194  Sum_probs=58.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||++++..+...|++|++++|++++.+.+ +.+     +..   ..+|..+.+..+.+.+.. . .+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFT-K-GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHh-c-CC
Confidence            589999999999999999999999999999999998876654 332     322   224666654444433221 1 23


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999993

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.21  E-value=3.6e-06  Score=76.05  Aligned_cols=104  Identities=17%  Similarity=0.302  Sum_probs=72.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||.+++..+...|++|+++++++++.+.+.+++     +...   .+|..+.+..+.+ .+..  .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~-~~~~--~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFDG---AIDYKNEDLAAGL-KREC--PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCSE---EEETTTSCHHHHH-HHHC--TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCCE---EEECCCHHHHHHH-HHhc--CC
Confidence            6899999999999999999999999999999999988766543322     3222   2366554433333 3322  34


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ++|++|+|+|..                        .++..++.++.       .|++|.++....
T Consensus       218 ~~d~vi~~~g~~------------------------~~~~~~~~l~~-------~G~iv~~G~~~~  252 (336)
T 4b7c_A          218 GIDVFFDNVGGE------------------------ILDTVLTRIAF-------KARIVLCGAISQ  252 (336)
T ss_dssp             CEEEEEESSCHH------------------------HHHHHHTTEEE-------EEEEEECCCGGG
T ss_pred             CceEEEECCCcc------------------------hHHHHHHHHhh-------CCEEEEEeeccc
Confidence            799999999930                        23344444543       689999987664

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.20  E-value=8e-06  Score=74.03  Aligned_cols=104  Identities=17%  Similarity=0.264  Sum_probs=71.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||++++..+...|++|+++++++++.+.+. .+     +...   .+|.++.+ +.+.+.++.. ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~-~~~~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPD-WPKEVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence            5899999999999999999999999999999999988776543 22     3222   24666653 2222333321 23


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ++|++|+++| . .                      .++..++.++.       .|+++.+++...
T Consensus       235 ~~d~vi~~~g-~-~----------------------~~~~~~~~l~~-------~G~~v~~g~~~~  269 (343)
T 2eih_A          235 GADKVVDHTG-A-L----------------------YFEGVIKATAN-------GGRIAIAGASSG  269 (343)
T ss_dssp             CEEEEEESSC-S-S----------------------SHHHHHHHEEE-------EEEEEESSCCCS
T ss_pred             CceEEEECCC-H-H----------------------HHHHHHHhhcc-------CCEEEEEecCCC
Confidence            7999999999 2 1                      13445555544       679999987543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.20  E-value=3e-06  Score=77.25  Aligned_cols=104  Identities=14%  Similarity=0.244  Sum_probs=71.8

Q ss_pred             CC--CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           28 SG--LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~--k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .|  +++||+||+||||+++++.+...|+ +|+++++++++.+.+.+++     +..   ..+|..+.+.. +.+.++..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~-~~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDNVA-EQLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSCHH-HHHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchHHH-HHHHHhcC
Confidence            57  9999999999999999999999999 9999999987665543322     222   22466664333 33333322


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                        +++|++|+|+|.                        ..++..++.++.       .|++|.++....
T Consensus       229 --~~~d~vi~~~G~------------------------~~~~~~~~~l~~-------~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 --AGVDVYFDNVGG------------------------NISDTVISQMNE-------NSHIILCGQISQ  264 (357)
T ss_dssp             --TCEEEEEESCCH------------------------HHHHHHHHTEEE-------EEEEEECCCGGG
T ss_pred             --CCCCEEEECCCH------------------------HHHHHHHHHhcc-------CcEEEEECCccc
Confidence              279999999992                        023445555543       679999987554

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.19  E-value=1.6e-05  Score=71.76  Aligned_cols=162  Identities=10%  Similarity=0.001  Sum_probs=98.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCC----HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRN----MAACREVKKAIVKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~----~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      +.++|+||||+|.||..++..|+..|.       .|++++++    +++++.....+....  ..+.   .|+....+..
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~   78 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPM   78 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcH
Confidence            346899999999999999999999885       79999998    655655455554421  1111   2333323333


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927           97 KFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      +.++       ..|++||.||....+.    ..-.+.+..|+-....+++.+..+-.       ..++||++|+......
T Consensus        79 ~al~-------~aD~Vi~~ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~~-------p~a~ii~~SNPv~~~t  140 (329)
T 1b8p_A           79 TAFK-------DADVALLVGARPRGPG----MERKDLLEANAQIFTVQGKAIDAVAS-------RNIKVLVVGNPANTNA  140 (329)
T ss_dssp             HHTT-------TCSEEEECCCCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHSC-------TTCEEEECSSSHHHHH
T ss_pred             HHhC-------CCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHhcC-------CCeEEEEccCchHHHH
Confidence            3333       7899999999743321    12335677888777777777766520       2569999998663211


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE  218 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~  218 (319)
                      .--      .....+++....|+.++.--..+...++..+.-
T Consensus       141 ~~~------~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          141 YIA------MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             HHH------HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             HHH------HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCc
Confidence            000      000002233345777766555666677777654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.18  E-value=2.7e-05  Score=70.21  Aligned_cols=104  Identities=16%  Similarity=0.299  Sum_probs=70.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+.. +++     +....   +|..+.+..+.+. +... ..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~~~---~~~~~~~~~~~~~-~~~~-~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAEYL---INASKEDILRQVL-KFTN-GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSEE---EETTTSCHHHHHH-HHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCcEE---EeCCCchHHHHHH-HHhC-CC
Confidence            689999999999999999999999999999999998876633 222     32222   3555443333332 2211 23


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ++|++|+|+|.  .                      .++.++..++.       .|++|.++...+
T Consensus       217 g~D~vid~~g~--~----------------------~~~~~~~~l~~-------~G~iv~~G~~~~  251 (334)
T 3qwb_A          217 GVDASFDSVGK--D----------------------TFEISLAALKR-------KGVFVSFGNASG  251 (334)
T ss_dssp             CEEEEEECCGG--G----------------------GHHHHHHHEEE-------EEEEEECCCTTC
T ss_pred             CceEEEECCCh--H----------------------HHHHHHHHhcc-------CCEEEEEcCCCC
Confidence            69999999993  0                      13444555544       689999987543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.17  E-value=6e-06  Score=75.21  Aligned_cols=79  Identities=16%  Similarity=0.255  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+||||.++++.+...|++|+++++++++.+.. +.+     +..   ..+|..+.+..+++.+..  ...
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~~~~~--~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKIKKYV--GEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHHHHHH--CTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHHHHHc--CCC
Confidence            589999999999999999999999999999999998776632 221     222   124666654444433322  123


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999999

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.17  E-value=7.7e-06  Score=76.92  Aligned_cols=109  Identities=20%  Similarity=0.264  Sum_probs=73.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEE--EcCCC---------CHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--ELDLS---------SLASVR   96 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~--~~Dl~---------~~~~v~   96 (319)
                      .|++|||+||+|+||.+++..+...|++|+++++++++.+.+. ++     +....+.  ..|+.         +.+++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~  293 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-----GCDLVINRAELGITDDIADDPRRVVETGR  293 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecccccccccccccccccchhhh
Confidence            6899999999999999999999999999999999987766542 22     3222221  12321         123445


Q ss_pred             HHHHHHHhcC-CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           97 KFASEFKSSG-LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        97 ~~~~~i~~~~-~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .+.+++.+.. +++|++|.++|..                        .++..++.++       +.|++|.+++..+
T Consensus       294 ~~~~~v~~~~g~g~Dvvid~~G~~------------------------~~~~~~~~l~-------~~G~iv~~G~~~~  340 (447)
T 4a0s_A          294 KLAKLVVEKAGREPDIVFEHTGRV------------------------TFGLSVIVAR-------RGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHSSCCSEEEECSCHH------------------------HHHHHHHHSC-------TTCEEEESCCTTC
T ss_pred             HHHHHHHHHhCCCceEEEECCCch------------------------HHHHHHHHHh-------cCCEEEEEecCCC
Confidence            5555555533 3799999999930                        1244455554       3789999987543

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.15  E-value=1.2e-05  Score=71.70  Aligned_cols=85  Identities=21%  Similarity=0.321  Sum_probs=63.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC---HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN---MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ..++++|++||+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.+.+.... +..+..  .++.+.+...+.+
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~~--~~~~~l~~~~~~l  218 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTV--TDLADQHAFTEAL  218 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEEE--EETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceEE--echHhhhhhHhhc
Confidence            46789999999998 8999999999999998 89999999   888888888776653 223333  4555543333333


Q ss_pred             HHHHhcCCCccEEEEccccC
Q 020927          100 SEFKSSGLPLNILINNAGIM  119 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~  119 (319)
                      .       ..|+|||+.+..
T Consensus       219 ~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          219 A-------SADILTNGTKVG  231 (312)
T ss_dssp             H-------HCSEEEECSSTT
T ss_pred             c-------CceEEEECCcCC
Confidence            3       469999998753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.11  E-value=2e-05  Score=62.68  Aligned_cols=79  Identities=14%  Similarity=0.100  Sum_probs=59.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |.++.++|.|+ |.+|+.+++.|.+.|.+|++++++ ++.++......     ...+.++..|.++++.+.++      .
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~   68 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------G   68 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------T
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------C
Confidence            34677899986 999999999999999999999997 45444433322     23478889999998876554      1


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (153)
T 1id1_A           69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             hhhCCEEEEecC
Confidence            237899998887

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=1.1e-05  Score=73.13  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|+++||+||+||||++++..+... |++|+++++++++.+.+. ++     +...   .+|..+.+..++ +.++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~~~~~~-~~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GADY---VINASMQDPLAE-IRRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHH-HHHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCCE---EecCCCccHHHH-HHHHhcC-
Confidence            6899999999999999999999999 999999999987766542 22     3222   235555443333 2333221 


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            489999999994

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.08  E-value=3.6e-05  Score=69.30  Aligned_cols=120  Identities=16%  Similarity=0.110  Sum_probs=77.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|+||||+|.+|..++..|+++|  ..|++++++++  +.....+.......++..    +....+..+.++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            579999999999999999999998  68999998765  222233333211112222    223344444443       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ..|++|+++|......    ..-...+..|+-....+++.+..+-        .++.|+++|.....
T Consensus        76 gaDvVi~~ag~~~~~g----~~r~dl~~~N~~~~~~i~~~i~~~~--------p~~~viv~SNPv~~  130 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG----MTRDDLFKINAGIVKTLCEGIAKCC--------PRAIVNLISNPVNS  130 (326)
T ss_dssp             TCSEEEECCCCCCCSS----CCCSHHHHHHHHHHHHHHHHHHHHC--------TTSEEEECCSSHHH
T ss_pred             CCCEEEEcCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC--------CCeEEEEECCchHH
Confidence            7899999999643221    1223557888888888877776653        24567776665544

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.05  E-value=2e-05  Score=71.72  Aligned_cols=79  Identities=20%  Similarity=0.369  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+.+.+ +     +....   +|..+.+..+.+ .+..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~~---~~~~~~~~~~~~-~~~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAKRG---INYRSEDFAAVI-KAET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSEE---EETTTSCHHHHH-HHHH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCEE---EeCCchHHHHHH-HHHh--CC
Confidence            68999999999999999999999999999999999887765432 2     32222   355554433333 3332  45


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999993

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.00  E-value=1.3e-05  Score=73.39  Aligned_cols=76  Identities=17%  Similarity=0.186  Sum_probs=53.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM---AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +++|++|||+|| |+||..++..+...|++|+++++++   ++.+.+ +.+     +  ...+  | .+  ++.+.+.+ 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----g--a~~v--~-~~--~~~~~~~~-  242 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----K--TNYY--N-SS--NGYDKLKD-  242 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----T--CEEE--E-CT--TCSHHHHH-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----C--Ccee--c-hH--HHHHHHHH-
Confidence            345999999999 9999999999999999999999987   665432 222     3  2233  5 44  22222222 


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                      ..  +++|++|.++|.
T Consensus       243 ~~--~~~d~vid~~g~  256 (366)
T 2cdc_A          243 SV--GKFDVIIDATGA  256 (366)
T ss_dssp             HH--CCEEEEEECCCC
T ss_pred             hC--CCCCEEEECCCC
Confidence            22  589999999994

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.99  E-value=3e-05  Score=60.20  Aligned_cols=75  Identities=17%  Similarity=0.325  Sum_probs=56.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ++.++|+|+ |.+|..+++.|.+.|.+|++++|+++..+...+    .   ..+.++..|.++.+.+.+.      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~---~~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----E---IDALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----H---CSSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----h---cCcEEEEcCCCCHHHHHHc------Cccc
Confidence            467999987 999999999999999999999999876654432    1   1355678899887654321      1347


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|++|++++
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            899999976

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.97  E-value=4e-05  Score=69.95  Aligned_cols=103  Identities=14%  Similarity=0.219  Sum_probs=70.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+.+ +     +... .  +|..+.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~-~--~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR-P--INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE-E--EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE-E--EecCChh-HHHHHHHhc--CC
Confidence            68999999999999999999999999999999999877654432 1     3222 1  2444332 333333332  24


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      ++|++|.|+|.                        ..++.+++.++.       .|++|.+++..+
T Consensus       231 g~D~vid~~g~------------------------~~~~~~~~~l~~-------~G~iv~~g~~~~  265 (362)
T 2c0c_A          231 GVDVVYESVGG------------------------AMFDLAVDALAT-------KGRLIVIGFISG  265 (362)
T ss_dssp             CEEEEEECSCT------------------------HHHHHHHHHEEE-------EEEEEECCCGGG
T ss_pred             CCCEEEECCCH------------------------HHHHHHHHHHhc-------CCEEEEEeCCCC
Confidence            79999999982                        023445565554       679999988654

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.97  E-value=2.7e-05  Score=71.28  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=60.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.|+-+.++|+|.|| |++|+.+++.|++ .++|.+.+++.+.++..         ...+..+.+|+.|.+++.++++  
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~--   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK--   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT--
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh--
Confidence            445556667999998 9999999999876 47899999998777654         2346678899999998888776  


Q ss_pred             HhcCCCccEEEEccccC
Q 020927          103 KSSGLPLNILINNAGIM  119 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~  119 (319)
                           +.|+||++++..
T Consensus        77 -----~~DvVi~~~p~~   88 (365)
T 3abi_A           77 -----EFELVIGALPGF   88 (365)
T ss_dssp             -----TCSEEEECCCGG
T ss_pred             -----CCCEEEEecCCc
Confidence                 679999999753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.97  E-value=5.1e-05  Score=71.53  Aligned_cols=109  Identities=16%  Similarity=0.206  Sum_probs=75.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEE--EcC--------CCCHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM--ELD--------LSSLASVRK   97 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~--~~D--------l~~~~~v~~   97 (319)
                      .|.+|||+||+|+||...+..+...|++|+++++++++++.+ +.+     +....+-  ..|        ..+.++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            689999999999999999999999999999999988776654 333     3222211  112        245566666


Q ss_pred             HHHHHHhcC--CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927           98 FASEFKSSG--LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus        98 ~~~~i~~~~--~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +.+.+.+..  .++|++|.++|.                        ..+...+..++.       .|+++.+++..+
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~------------------------~~~~~~~~~l~~-------~G~iv~~G~~~~  348 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR------------------------ETFGASVFVTRK-------GGTITTCASTSG  348 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH------------------------HHHHHHHHHEEE-------EEEEEESCCTTC
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc------------------------hhHHHHHHHhhC-------CcEEEEEecCCC
Confidence            667776642  379999999983                        023444555544       679999887543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.96  E-value=7e-05  Score=67.93  Aligned_cols=103  Identities=15%  Similarity=0.114  Sum_probs=68.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ++++||+||+|+||.+.+..+...|++|+++++++++.+.+. ++     +....   +|..+.+-.+.+ .++... .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~~---~~~~~~~~~~~v-~~~~~~-~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAHV---LNEKAPDFEATL-REVMKA-EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSEE---EETTSTTHHHHH-HHHHHH-HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCEE---EECCcHHHHHHH-HHHhcC-CC
Confidence            489999999999999999999999999999999988766543 22     32222   344443333332 222211 27


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +|++|.++|..                        .++.+++.++       ..|++|.+++..+
T Consensus       234 ~D~vid~~g~~------------------------~~~~~~~~l~-------~~G~iv~~G~~~~  267 (349)
T 3pi7_A          234 PRIFLDAVTGP------------------------LASAIFNAMP-------KRARWIIYGRLDP  267 (349)
T ss_dssp             CCEEEESSCHH------------------------HHHHHHHHSC-------TTCEEEECCCSCC
T ss_pred             CcEEEECCCCh------------------------hHHHHHhhhc-------CCCEEEEEeccCC
Confidence            99999999931                        1133455554       3789999987543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.96  E-value=2.5e-05  Score=67.64  Aligned_cols=83  Identities=13%  Similarity=0.282  Sum_probs=67.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. +|++++++.                   .+.+...+.+...+|..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            367899999996 6999999999999997 899999987                   7888888888888888888888


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..++.. +.+.+++.       ..|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            777763 34444443       6799998875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.95  E-value=2.9e-05  Score=69.79  Aligned_cols=80  Identities=16%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+... ++     +....   +|..+.+..+.+.+ .. ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~~---~~~~~~~~~~~~~~-~~-~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWET---IDYSHEDVAKRVLE-LT-DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSEE---EETTTSCHHHHHHH-HT-TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCEE---EeCCCccHHHHHHH-Hh-CCC
Confidence            5899999999999999999999999999999999988776543 22     32222   35555443333322 21 123


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            79999999993

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.94  E-value=3.4e-05  Score=67.68  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=57.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++++|+++|+|+ ||+|++++..|++.|.+|++++|+.++++++.+.+...  + .+..  .|+   ++       +.+
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~-------~~~  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DS-------IPL  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GG-------CCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HH-------hcc
Confidence            5678999999998 79999999999999999999999998888877766332  1 2322  232   11       101


Q ss_pred             cCCCccEEEEccccC
Q 020927          105 SGLPLNILINNAGIM  119 (319)
Q Consensus       105 ~~~~id~lv~nag~~  119 (319)
                        +..|+||++++..
T Consensus       179 --~~~DivIn~t~~~  191 (272)
T 1p77_A          179 --QTYDLVINATSAG  191 (272)
T ss_dssp             --SCCSEEEECCCC-
T ss_pred             --CCCCEEEECCCCC
Confidence              4799999999964

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.90  E-value=5.9e-05  Score=68.17  Aligned_cols=101  Identities=16%  Similarity=0.101  Sum_probs=70.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+|| |+||..++..+...|++|+++++++++.+.+. .+     +...   .+|..+.+ +.+.+.++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GADL---VVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCSE---EECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCCE---EecCCCcc-HHHHHHHHh---C
Confidence            5899999999 88999999999999999999999988766442 22     3221   24666543 323333332   4


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++|++|.++|..                       ..++..++.++.       .|+++.+++..
T Consensus       230 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~-------~G~~v~~g~~~  264 (339)
T 1rjw_A          230 GVHAAVVTAVSK-----------------------PAFQSAYNSIRR-------GGACVLVGLPP  264 (339)
T ss_dssp             SEEEEEESSCCH-----------------------HHHHHHHHHEEE-------EEEEEECCCCS
T ss_pred             CCCEEEECCCCH-----------------------HHHHHHHHHhhc-------CCEEEEecccC
Confidence            799999999831                       134555566654       67999988744

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.89  E-value=2.2e-05  Score=69.77  Aligned_cols=78  Identities=21%  Similarity=0.173  Sum_probs=56.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++++++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+....   . ..     .+.+++       .
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~---~-~~-----~~~~~~-------~  199 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR---S-AY-----FSLAEA-------E  199 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS---C-CE-----ECHHHH-------H
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc---C-ce-----eeHHHH-------H
Confidence            4678999999998 7899999999999998 89999999988777665542110   0 11     122222       2


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                      +.....|+||++++..
T Consensus       200 ~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          200 TRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HTGGGCSEEEECSCTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            2234789999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.85  E-value=3.5e-05  Score=69.66  Aligned_cols=80  Identities=19%  Similarity=0.255  Sum_probs=56.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+++||.+++..+...|++|+++++++++.+.+.+ +     +....   +|..+.+..+.+ .++. ...
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~~---~~~~~~~~~~~~-~~~~-~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAYV---IDTSTAPLYETV-MELT-NGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEE---EETTTSCHHHHH-HHHT-TTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcEE---EeCCcccHHHHH-HHHh-CCC
Confidence            68999999999999999999998899999999998877654433 2     32222   355554333332 2221 123


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999994

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.80  E-value=0.00011  Score=64.78  Aligned_cols=91  Identities=12%  Similarity=0.352  Sum_probs=73.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH------------------HHHHHHHHHHHhhCCCCceEEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM------------------AACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~------------------~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                  .+.+.+.+.+.+.+|..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            367889999986 7999999999999997 899998765                  67788888888888888999999


Q ss_pred             cCCCCHHHHHHHHHHHHhc----CCCccEEEEccc
Q 020927           87 LDLSSLASVRKFASEFKSS----GLPLNILINNAG  117 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~----~~~id~lv~nag  117 (319)
                      .+++..+.+..+++.+...    ....|++|.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            9998877777777655321    136899987664

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.80  E-value=0.00012  Score=64.33  Aligned_cols=76  Identities=16%  Similarity=0.252  Sum_probs=58.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+.+....   .+.....+  +   +       
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~~~~--~---l-------  184 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQAFE--Q---L-------  184 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGG--G---C-------
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEeeHH--H---h-------
Confidence            45789999999998 6999999999999997 89999999999888887775431   34443321  1   1       


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                         ....|++|++.+.
T Consensus       185 ---~~~aDiIInaTp~  197 (281)
T 3o8q_A          185 ---KQSYDVIINSTSA  197 (281)
T ss_dssp             ---CSCEEEEEECSCC
T ss_pred             ---cCCCCEEEEcCcC
Confidence               0378999999875

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.79  E-value=7.9e-05  Score=65.26  Aligned_cols=76  Identities=17%  Similarity=0.275  Sum_probs=57.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+..    ..+..+.  +.+.   .      
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~~--~~~l---~------  178 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRISR--YEAL---E------  178 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEEC--SGGG---T------
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEee--HHHh---c------
Confidence            45789999999998 6999999999999996 899999999988887776532    1344332  2221   1      


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                       .  ...|++|++.+.
T Consensus       179 -~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 -G--QSFDIVVNATSA  191 (272)
T ss_dssp             -T--CCCSEEEECSSG
T ss_pred             -c--cCCCEEEECCCC
Confidence             1  378999999875

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.78  E-value=8.5e-05  Score=67.23  Aligned_cols=79  Identities=28%  Similarity=0.410  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++|||+||+|+||.+++..+...|++|+++++++++.+.+.+ +     +... .+  |..  +++.+.+.++.. ..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~~-v~--~~~--~~~~~~v~~~~~-~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GADI-VL--PLE--EGWAKAVREATG-GA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE-EE--ESS--TTHHHHHHHHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-Ee--cCc--hhHHHHHHHHhC-CC
Confidence            68999999999999999999999999999999998877654332 2     3222 22  333  223333333221 12


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999994

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.74  E-value=5.1e-05  Score=62.13  Aligned_cols=80  Identities=14%  Similarity=0.086  Sum_probs=59.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.++.++.++|.| .|.+|..+++.|.+. |++|++++++++..+...+    .    .+..+..|.++++.+.++    
T Consensus        34 ~~~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~----  100 (183)
T 3c85_A           34 LINPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERI----  100 (183)
T ss_dssp             CBCCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTB----
T ss_pred             CcCCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhc----
Confidence            3456788899998 599999999999999 9999999999877655332    1    355677899987654332    


Q ss_pred             HhcCCCccEEEEccc
Q 020927          103 KSSGLPLNILINNAG  117 (319)
Q Consensus       103 ~~~~~~id~lv~nag  117 (319)
                       ....+.|++|.+.+
T Consensus       101 -~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 -LDTGHVKLVLLAMP  114 (183)
T ss_dssp             -CSCCCCCEEEECCS
T ss_pred             -cCCCCCCEEEEeCC
Confidence             01347899998876

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.73  E-value=3.8e-05  Score=61.24  Aligned_cols=79  Identities=11%  Similarity=0.129  Sum_probs=56.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -+..+++++|.|+ |.+|..+++.|.+.|++|++++|+++.++....       ...+..+..|..+.+.+.+.      
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTT------
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHc------
Confidence            4467889999996 999999999999999999999999876543210       11345677888886544321      


Q ss_pred             cCCCccEEEEccc
Q 020927          105 SGLPLNILINNAG  117 (319)
Q Consensus       105 ~~~~id~lv~nag  117 (319)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1236899999887

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.72  E-value=0.00022  Score=65.02  Aligned_cols=78  Identities=17%  Similarity=0.209  Sum_probs=57.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+..     ...+..+   ..+.+++.+.+.     
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~-----  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-----GSRVELL---YSNSAEIETAVA-----  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGSEEE---ECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh-----CceeEee---eCCHHHHHHHHc-----
Confidence            467799999999 99999999999999999999999998877654432     1222222   233444443332     


Q ss_pred             CCCccEEEEccccC
Q 020927          106 GLPLNILINNAGIM  119 (319)
Q Consensus       106 ~~~id~lv~nag~~  119 (319)
                        ..|++|++++..
T Consensus       230 --~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 --EADLLIGAVLVP  241 (361)
T ss_dssp             --TCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              689999999863

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.70  E-value=0.00027  Score=63.13  Aligned_cols=157  Identities=15%  Similarity=0.140  Sum_probs=91.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeC--CHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVR--NMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r--~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +|+||||+|++|..++..|+..|.  .++++++  +++.++.....+....+  +..+.....|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            699999999999999999999884  6999999  76655543333332211  1222222211    01111       


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      .+...|++||.||....+.    ..-...+..|+-....+++.+..+-         ++.|+++|........-      
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~---------~~~vlv~SNPv~~~t~~------  131 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----MSRMDLAKTNAKIVGKYAKKIAEIC---------DTKIFVITNPVDVMTYK------  131 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHC---------CCEEEECSSSHHHHHHH------
T ss_pred             HhCCCCEEEECCCCCCCCC----CcHHHHHHHHHHHHHHHHHHHHHhC---------CeEEEEecCcHHHHHHH------
Confidence            2337899999999743221    1224558888888888887776653         34777777655432100      


Q ss_pred             CCCCCCCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 020927          185 RINDQSGYNRFSAYGQ-SKLANVLHTSELARRLKE  218 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  218 (319)
                       .....+++....++. +..--..+...++..+.-
T Consensus       132 -~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv  165 (313)
T 1hye_A          132 -ALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGV  165 (313)
T ss_dssp             -HHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTC
T ss_pred             -HHHhhCcChhcEEEeCccHHHHHHHHHHHHHhCc
Confidence             000012223345665 554445555666666653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.70  E-value=0.00012  Score=67.19  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+.|++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+     +..+.   .|..+..++.+++.    
T Consensus       164 ~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~~---~~~~~~~~l~~~l~----  230 (377)
T 2vhw_A          164 PGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRIH---TRYSSAYELEGAVK----  230 (377)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSSE---EEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCeeE---eccCCHHHHHHHHc----
Confidence            3678999999998 99999999999999999999999988766544322     22322   23445555555543    


Q ss_pred             cCCCccEEEEccccC
Q 020927          105 SGLPLNILINNAGIM  119 (319)
Q Consensus       105 ~~~~id~lv~nag~~  119 (319)
                         ..|++|++++..
T Consensus       231 ---~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 ---RADLVIGAVLVP  242 (377)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               579999999853

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.69  E-value=8.8e-05  Score=67.77  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+|+ |+||..++..+...|++|+++++++++.+...+.+     +...   .+|..+.+.+.+       ..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~~~~~~-------~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQEQMQA-------AAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCHHHHHH-------TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCHHHHHH-------hhC
Confidence            7899999996 99999999999999999999999987765543222     3221   235566543322       234


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.67  E-value=0.00085  Score=61.00  Aligned_cols=83  Identities=19%  Similarity=0.200  Sum_probs=60.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||.|| |++|...+..+...|++ |+++++++++.+.+.+ +     ...+..+..|-.+.+++.+.+.++.. .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-----CPEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-----CTTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----chhcccccccccchHHHHHHHHHHhC-C
Confidence            6899999998 99999999888889997 9999999887664432 2     23455556665566665554444321 2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999983

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.66  E-value=0.00034  Score=63.33  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=69.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|+++||+|| |+||..++..+...|+ +|+++++++++.+... .+     +...   .+|..+.+ +.+.+.++.. .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~-~~~~v~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEED-VVKEVMDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTSC-HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCcC-HHHHHHHHcC-C
Confidence            7899999999 9999999999989999 8999999987765443 22     3221   13555433 2222332211 1


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .++|++|.++|..                       ..++.+++.++.       .|+++.+++..
T Consensus       235 ~g~D~vid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP-----------------------KALEQGLQAVTP-------AGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH-----------------------HHHHHHHHHEEE-------EEEEEECCCCS
T ss_pred             CCCCEEEECCCCH-----------------------HHHHHHHHHHhc-------CCEEEEEccCC
Confidence            2699999999830                       134555566654       67999998754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.66  E-value=0.00027  Score=63.93  Aligned_cols=78  Identities=14%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||.+.+..+...|++|+++++++++.+.+.+ +     +....   +|..+  +..+.+.++  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v---i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADIV---LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSEE---ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcEE---EECCc--cHHHHHHHh--CCC
Confidence            68999999999999999999999999999999999887665433 2     32221   23333  233333333  234


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999983

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.65  E-value=0.00035  Score=62.17  Aligned_cols=118  Identities=15%  Similarity=0.070  Sum_probs=74.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeC--CHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVR--NMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r--~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||||+|.+|..++..|+..|.  .++++++  ++++++.....+..... ...+.... |  +.+    .       
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a-------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----D-------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----G-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----H-------
Confidence            699999999999999999999885  6999999  87766544444443211 22333322 2  111    1       


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      +...|++|+.||....+. .   .-...+..|+-....+++.+..+        ..++.|+++|.....
T Consensus        68 ~~~aDvVi~~ag~~~~~g-~---~r~dl~~~N~~i~~~i~~~i~~~--------~p~~~viv~SNPv~~  124 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG-Q---TRIDLAGDNAPIMEDIQSSLDEH--------NDDYISLTTSNPVDL  124 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT-C---CHHHHHHHHHHHHHHHHHHHHTT--------CSCCEEEECCSSHHH
T ss_pred             hCCCCEEEEcCCCCCCCC-C---CHHHHHHHHHHHHHHHHHHHHHH--------CCCcEEEEeCChHHH
Confidence            237899999999743221 1   12345677777766666666443        135567776665543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.58  E-value=0.00021  Score=61.73  Aligned_cols=83  Identities=17%  Similarity=0.304  Sum_probs=64.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++...+.+.+.+|..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367899999997 6799999999999997 788886432                   6778888888888888888887


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..++.. +.+.++++       ..|++|.+..
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            776654 44545544       4699998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.57  E-value=0.0003  Score=54.92  Aligned_cols=76  Identities=14%  Similarity=0.078  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++ +.++|.|+ |.+|..+++.|.+.|+.|++++++++..+...+        ..+..+..|.++++.+.++      .
T Consensus         5 ~~~-~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            5 DIC-NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             CCC-SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT------T
T ss_pred             cCC-CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc------C
Confidence            444 45778886 889999999999999999999999987765432        1466788999998876553      1


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      ....|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (140)
T 3fwz_A           69 LECAKWLILTIP   80 (140)
T ss_dssp             GGGCSEEEECCS
T ss_pred             cccCCEEEEECC
Confidence            126788888877

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.53  E-value=0.00031  Score=63.48  Aligned_cols=76  Identities=21%  Similarity=0.421  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||.+++..+...|++|+++ +++++.+.+ +++     +...    +| .+.+ +.+.+.+... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~~-~~~~~~~~~~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASRE-PEDYAAEHTA-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTSC-HHHHHHHHHT-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCCC-HHHHHHHHhc-CC
Confidence            68999999999999999999999999999999 777765533 222     3332    34 3322 3333333322 23


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|.++|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.52  E-value=0.0014  Score=58.46  Aligned_cols=119  Identities=18%  Similarity=0.138  Sum_probs=73.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|.|+||+|.+|..++..|+..|  ..|+++++++  .+.....+.......++....    ...+.++.++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            68999999999999999999998  5899999987  233333443321111222221    0122333333       7


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .|++|+.+|....+. .+   -.+.+..|+-....+.+.+.++-        ..+.||++|.....
T Consensus        69 aDvVvi~ag~~~~~g-~~---r~dl~~~n~~i~~~i~~~i~~~~--------p~a~viv~sNPv~~  122 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MT---RDDLFNTNATIVATLTAACAQHC--------PDAMICIISNPVNS  122 (314)
T ss_dssp             CSEEEECCSCCCCTT-CC---GGGGHHHHHHHHHHHHHHHHHHC--------TTSEEEECSSCHHH
T ss_pred             CCEEEECCCcCCCCC-Cc---HHHHHHHHHHHHHHHHHHHHhhC--------CCeEEEEECCCcch
Confidence            899999999753321 11   12345666665555555554432        36799998887654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.52  E-value=6.8e-05  Score=58.92  Aligned_cols=71  Identities=14%  Similarity=0.235  Sum_probs=53.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +++++|.|+ |++|+++++.|.+.|++|++++|++++.+.+.+.+     +  ....  +..+   +.+++.       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~--~~~~--~~~~---~~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----E--YEYV--LIND---IDSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----T--CEEE--ECSC---HHHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----C--CceE--eecC---HHHHhc-------C
Confidence            899999996 99999999999999999999999998887766554     2  1221  2233   333333       6


Q ss_pred             ccEEEEccccC
Q 020927          109 LNILINNAGIM  119 (319)
Q Consensus       109 id~lv~nag~~  119 (319)
                      .|++|.+++..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            79999998854

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.50  E-value=0.00024  Score=59.83  Aligned_cols=73  Identities=19%  Similarity=0.173  Sum_probs=58.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .++|.|+ |.+|..+++.|.++|..|++++++++..+...+.       ..+.++..|.++++.++++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            5899996 8999999999999999999999999877654432       1466889999998776644      123679


Q ss_pred             EEEEccc
Q 020927          111 ILINNAG  117 (319)
Q Consensus       111 ~lv~nag  117 (319)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998776

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.48  E-value=0.00019  Score=63.57  Aligned_cols=73  Identities=18%  Similarity=0.216  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~~  106 (319)
                      .|+++||+||+|++|.+++..+...|++|+++++++++.+... .+     +...   .+|..+ .+.    .+.+    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~---~~~~~~~~~~----~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEE---AATYAEVPER----AKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSE---EEEGGGHHHH----HHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEECCcchhH----HHHh----
Confidence            6899999999999999999999999999999999887765432 22     3221   135444 222    2222    


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|. +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            47999999 883

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.46  E-value=0.00033  Score=63.25  Aligned_cols=100  Identities=16%  Similarity=0.138  Sum_probs=68.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.++||+|| |++|..++..+...|+ +|+++++++++.+...+ +        . ...+|..+. ++.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l--------a-~~v~~~~~~-~~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y--------A-DRLVNPLEE-DLLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T--------C-SEEECTTTS-CHHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h--------H-HhccCcCcc-CHHHHHHHhc--C
Confidence            7899999999 9999999998888999 89999999876543211 1        1 112355543 2333344433  3


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      .++|++|.++|.                       -..++..++.++.       .|+++.++..
T Consensus       230 ~g~D~vid~~g~-----------------------~~~~~~~~~~l~~-------~G~iv~~g~~  264 (343)
T 2dq4_A          230 SGVEVLLEFSGN-----------------------EAAIHQGLMALIP-------GGEARILGIP  264 (343)
T ss_dssp             SCEEEEEECSCC-----------------------HHHHHHHHHHEEE-------EEEEEECCCC
T ss_pred             CCCCEEEECCCC-----------------------HHHHHHHHHHHhc-------CCEEEEEecC
Confidence            479999999983                       0124555566654       6799998863

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.44  E-value=0.0019  Score=58.43  Aligned_cols=81  Identities=25%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHh-c
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKS-S  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~-~  105 (319)
                      .|++|||+|+ |++|...+..+...|++|+++++++++.+.+. ++     +... .  +|..+ .+..+++.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-~--~~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GADV-T--LVVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCSE-E--EECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCCE-E--EcCcccccHHHHHHHHhcccc
Confidence            6899999997 89999999988889999999999987765432 22     3221 2  24433 2222222221110 1


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|++|.++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999983

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.41  E-value=0.0023  Score=57.41  Aligned_cols=122  Identities=12%  Similarity=0.027  Sum_probs=78.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCC--CceEEEEcCCCCHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPN--AKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +.+.++|.|+|+ |.+|.+++..|+..|.  .|+++++++++++.....+....|-  ..+.....|   .         
T Consensus         2 ~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~---------   68 (326)
T 3pqe_A            2 NKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y---------   68 (326)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G---------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H---------
Confidence            334678999996 9999999999999996  8999999998888766666654321  233333222   1         


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                        +.+...|++|..+|....+.    +.-...++.|.-    +++.+.+.+.+..    .++.++++|.....
T Consensus        69 --~a~~~aDvVvi~ag~p~kpG----~~R~dL~~~N~~----Iv~~i~~~I~~~~----p~a~vlvvtNPvd~  127 (326)
T 3pqe_A           69 --EDCKDADIVCICAGANQKPG----ETRLELVEKNLK----IFKGIVSEVMASG----FDGIFLVATNPVDI  127 (326)
T ss_dssp             --GGGTTCSEEEECCSCCCCTT----CCHHHHHHHHHH----HHHHHHHHHHHTT----CCSEEEECSSSHHH
T ss_pred             --HHhCCCCEEEEecccCCCCC----ccHHHHHHHHHH----HHHHHHHHHHHhc----CCeEEEEcCChHHH
Confidence              12337899999999643221    112233455543    4445555554432    46788988886644

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.36  E-value=0.0013  Score=57.74  Aligned_cols=46  Identities=15%  Similarity=0.182  Sum_probs=40.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVK   70 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~   70 (319)
                      ..++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            46688999999998 6999999999999998 8999999998776554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.35  E-value=0.0021  Score=57.57  Aligned_cols=124  Identities=11%  Similarity=0.120  Sum_probs=74.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+..+++|.|+|| |.+|.+++..|+..|.  +|+++++++++++.....+....+- ..+.....|            
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~------------   70 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE------------   70 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC------------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc------------
Confidence            34567788999996 9999999999999986  8999999998888777777654321 123332222            


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                        .+.+...|++|..||....+. .   .-.+.++.|.    .+++.+.+.+.+..    +++.++++|.....
T Consensus        71 --~~a~~~aDiVvi~ag~~~kpG-~---tR~dL~~~N~----~I~~~i~~~i~~~~----p~a~ilvvtNPvdi  130 (326)
T 3vku_A           71 --YSDAKDADLVVITAGAPQKPG-E---TRLDLVNKNL----KILKSIVDPIVDSG----FNGIFLVAANPVDI  130 (326)
T ss_dssp             --GGGGTTCSEEEECCCCC------------------------CHHHHHHHHHTTT----CCSEEEECSSSHHH
T ss_pred             --HHHhcCCCEEEECCCCCCCCC-c---hHHHHHHHHH----HHHHHHHHHHHhcC----CceEEEEccCchHH
Confidence              112347899999999743221 1   1223344444    34455555555442    46788888876543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.34  E-value=0.0025  Score=58.31  Aligned_cols=104  Identities=15%  Similarity=0.162  Sum_probs=67.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC--CHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS--SLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~v~~~~~~i~~  104 (319)
                      .|.+|||+| +|++|...+..+...| .+|+++++++++.+.+. ++     +... .  +|..  +.+++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GADL-T--LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCSE-E--EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCcE-E--EeccccCcchHHHHHHHHhC
Confidence            589999999 8999999999888899 59999999987765443 22     3221 2  2333  23444333333321


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                       ..++|++|.++|..                       ..++..++.++.       .|++|.++...
T Consensus       265 -g~g~Dvvid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~G~~~  301 (380)
T 1vj0_A          265 -GRGADFILEATGDS-----------------------RALLEGSELLRR-------GGFYSVAGVAV  301 (380)
T ss_dssp             -TSCEEEEEECSSCT-----------------------THHHHHHHHEEE-------EEEEEECCCCS
T ss_pred             -CCCCcEEEECCCCH-----------------------HHHHHHHHHHhc-------CCEEEEEecCC
Confidence             12699999999831                       123444555544       67999988644

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.32  E-value=0.00021  Score=63.48  Aligned_cols=94  Identities=15%  Similarity=0.176  Sum_probs=59.9

Q ss_pred             CCCCCE-EEEeCCCC-----------------c-hhHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHHHHhh-
Q 020927           26 DGSGLT-AIVTGASS-----------------G-IGTETARVLALRGVHVVMAVRNMAACRE---------VKKAIVKE-   76 (319)
Q Consensus        26 ~l~~k~-vlItGas~-----------------g-IG~aia~~La~~G~~Vv~~~r~~~~~~~---------~~~~~~~~-   76 (319)
                      ++.||. ||||+|+.                 | .|.++|++++++|+.|+++++..+ +..         ..+.+... 
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence            368888 99987765                 5 999999999999999999987432 110         01110000 


Q ss_pred             CCCCceEEEEcCCCCHHHHHHHHHHH------------------------------HhcCCCccEEEEccccCC
Q 020927           77 IPNAKVQAMELDLSSLASVRKFASEF------------------------------KSSGLPLNILINNAGIMA  120 (319)
Q Consensus        77 ~~~~~v~~~~~Dl~~~~~v~~~~~~i------------------------------~~~~~~id~lv~nag~~~  120 (319)
                      .....+..+.+|+....++.+.+.+.                              .+.++..|++|++|++..
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            00123445566666655555555433                              234568999999999854

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.31  E-value=0.0013  Score=59.40  Aligned_cols=121  Identities=11%  Similarity=0.089  Sum_probs=74.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh-CCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKE-IPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      |.+++|.|+||+|.+|..++..++..|.  +|+++++++++++.....+... ++..++.+ .   ++   ..+.++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC---
Confidence            4578899999999999999999999994  7999999998877666666543 22223322 1   12   222222   


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCC-eEEEeCCccc
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEG-RIVNVSSRRH  173 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~-~ii~isS~~~  173 (319)
                          ..|++|.++|....+.    +.-.+.++.|.-    +++.+.+.+.+..    .++ .|+++|....
T Consensus        76 ----dADvVvitaG~p~kpG----~~R~dLl~~N~~----I~~~i~~~i~~~~----p~a~~vlvvsNPvd  130 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPRKEG----MTREDLLKGNAE----IAAQLGKDIKSYC----PDCKHVIIIFNPAD  130 (343)
T ss_dssp             ----TEEEEEECCC-----------CHHHHHHHHHH----HHHHHHHHHHHHC----TTCCEEEECSSSHH
T ss_pred             ----CCCEEEEccCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhc----cCcEEEEEecCchH
Confidence                6899999999742221    112334555544    4444555554432    356 4788887653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.30  E-value=0.00035  Score=58.42  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=37.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      +++|+||+|.+|.++++.|++.|++|++++|+++..+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877665543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.27  E-value=0.00083  Score=62.20  Aligned_cols=73  Identities=21%  Similarity=0.346  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.+++++..+.+     +..  .  .+..   ++.+++.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~~---~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRFD---ELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCGG---GHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecHH---hHHHHhc----
Confidence            578999999998 9999999999999998 8999999988776555544     322  1  2322   3333332    


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                         ..|++|.++|.
T Consensus       227 ---~aDvVi~at~~  237 (404)
T 1gpj_A          227 ---RSDVVVSATAA  237 (404)
T ss_dssp             ---TCSEEEECCSS
T ss_pred             ---CCCEEEEccCC
Confidence               68999999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.27  E-value=0.0012  Score=60.20  Aligned_cols=104  Identities=19%  Similarity=0.207  Sum_probs=67.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH-hc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK-SS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~-~~  105 (319)
                      .|.+|||+|| |++|...+..+...|+ +|+++++++++.+.. +++     +...   ..|..+.+-.+. +.+.. ..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~-i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GATA---TVDPSAGDVVEA-IAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTSSCHHHH-HHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EECCCCcCHHHH-HHhhhhcc
Confidence            5899999998 8999999988888999 899999998776533 333     3222   135555432222 22211 12


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .+++|++|.++|..                       ..++..+..++.       .|+++.++...
T Consensus       251 ~gg~Dvvid~~G~~-----------------------~~~~~~~~~l~~-------~G~vv~~G~~~  287 (370)
T 4ej6_A          251 PGGVDVVIECAGVA-----------------------ETVKQSTRLAKA-------GGTVVILGVLP  287 (370)
T ss_dssp             TTCEEEEEECSCCH-----------------------HHHHHHHHHEEE-------EEEEEECSCCC
T ss_pred             CCCCCEEEECCCCH-----------------------HHHHHHHHHhcc-------CCEEEEEeccC
Confidence            34799999999831                       134455555544       67999987644

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.27  E-value=0.00062  Score=61.29  Aligned_cols=120  Identities=13%  Similarity=0.041  Sum_probs=75.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--E-----EEEEeCCH--HHHHHHHHHHHhh-CCCCceEEEEcCCCCHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--H-----VVMAVRNM--AACREVKKAIVKE-IPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~-----Vv~~~r~~--~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ++|+||||+|.||..++..|+..|.  +     |+++++++  +.++.....+... .+-  ..-+.  ...  ...+. 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~~~~--~~~--~~~~~-   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LKDVI--ATD--KEEIA-   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EEEEE--EES--CHHHH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cCCEE--EcC--CcHHH-
Confidence            5799999999999999999999875  5     99999974  4566666666553 221  11111  111  11111 


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCC-eEEEeCCcccc
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEG-RIVNVSSRRHQ  174 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~-~ii~isS~~~~  174 (319)
                            +...|++|+.||....+    -+.-.+.++.|+.....+.+.+..+-        .++ +++++|.....
T Consensus        77 ------~~daDvVvitAg~prkp----G~tR~dll~~N~~i~~~i~~~i~~~~--------~~~~~vivvsNPvd~  134 (333)
T 5mdh_A           77 ------FKDLDVAILVGSMPRRD----GMERKDLLKANVKIFKCQGAALDKYA--------KKSVKVIVVGNPANT  134 (333)
T ss_dssp             ------TTTCSEEEECCSCCCCT----TCCTTTTHHHHHHHHHHHHHHHHHHS--------CTTCEEEECSSSHHH
T ss_pred             ------hCCCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC--------CCCeEEEEcCCchHH
Confidence                  23789999999964322    12344567777766555555554432        245 68888876543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.26  E-value=0.0038  Score=57.59  Aligned_cols=79  Identities=18%  Similarity=0.337  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||+|| |++|...+..+...|+ +|+++++++++.+.+ +++     +....   +|..+.+-. +.+.++.. .
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~~~~~~~~-~~i~~~t~-g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADHV---IDPTKENFV-EAVLDYTN-G  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSEE---ECTTTSCHH-HHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCEE---EcCCCCCHH-HHHHHHhC-C
Confidence            6899999998 8999999988888999 899999998776643 232     32222   354444322 22222211 2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.24  E-value=0.00086  Score=60.24  Aligned_cols=63  Identities=14%  Similarity=0.231  Sum_probs=52.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            467899999986 7999999999999997 799987643                   5778888888888888888888


Q ss_pred             EcCC
Q 020927           86 ELDL   89 (319)
Q Consensus        86 ~~Dl   89 (319)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.24  E-value=0.0086  Score=52.40  Aligned_cols=43  Identities=26%  Similarity=0.234  Sum_probs=37.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~   73 (319)
                      ++|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            57888875 78999999999999999999999999888776654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.22  E-value=0.0014  Score=59.87  Aligned_cols=79  Identities=14%  Similarity=0.158  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +...   .+|..+ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATD---FVNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCE---EECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCce---EEeccccchhHHHHHHHHhC-
Confidence            5899999996 9999999998888998 8999999987766432 22     3221   134443 1234444444433 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +++|++|.++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.22  E-value=0.0063  Score=54.66  Aligned_cols=130  Identities=16%  Similarity=0.116  Sum_probs=74.9

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhh---C-CCCceEEEEcCCCCHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKE---I-PNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~---~-~~~~v~~~~~Dl~~~~~v~   96 (319)
                      ++.|..+.++|.|.|| |.+|.+++..|+..|. +|++.+++++.++.....+...   . ...++.+ .   ++   .+
T Consensus         2 ~~~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~   73 (331)
T 1pzg_A            2 APALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YE   73 (331)
T ss_dssp             -CCCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HH
T ss_pred             CcCcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HH
Confidence            3445555678999998 9999999999999997 9999999988777644444332   1 1122322 1   22   22


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCcccCcc-cccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927           97 KFASEFKSSGLPLNILINNAGIMATPFMLSKD-NIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus        97 ~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~-~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      +.++       ..|++|..+|....+...+.. .-...+..|.-    +.+.+.+.+.+..    +.+.+|++|...+.
T Consensus        74 ea~~-------~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~----i~~~i~~~i~~~~----p~a~vi~~tNP~~~  137 (331)
T 1pzg_A           74 AALT-------GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYC----PKTFIIVVTNPLDC  137 (331)
T ss_dssp             HHHT-------TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             HHhC-------CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHH----HHHHHHHHHHHHC----CCcEEEEEcCchHH
Confidence            2222       679999999974332110000 11122333333    4444444444431    35677777766543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.19  E-value=0.0015  Score=59.43  Aligned_cols=78  Identities=13%  Similarity=0.171  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+| +|+||...+..+...|++|+++++++++.+.+ +++     +....   +| .+.+++.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADHG---IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSEE---EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCEE---Ec-CCcccHHHHHHHHhC-CC
Confidence            689999999 89999999999888999999999998876653 222     33222   24 332333333333322 22


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            7999999998

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.19  E-value=0.0018  Score=58.41  Aligned_cols=101  Identities=20%  Similarity=0.233  Sum_probs=66.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR--GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|| |+||...+..+...  |++|+++++++++.+.+. ++     +....   +|..+.   ...++++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADYV---SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSEE---ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCEE---eccccc---hHHHHHhhc-
Confidence            7899999999 89999999888888  999999999988765443 22     32211   233220   122334332 


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ..++|++|.++|..                       ..++..+..++.       .|+++.++...
T Consensus       236 g~g~D~vid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~g~~~  272 (344)
T 2h6e_A          236 GLGASIAIDLVGTE-----------------------ETTYNLGKLLAQ-------EGAIILVGMEG  272 (344)
T ss_dssp             TCCEEEEEESSCCH-----------------------HHHHHHHHHEEE-------EEEEEECCCCS
T ss_pred             CCCccEEEECCCCh-----------------------HHHHHHHHHhhc-------CCEEEEeCCCC
Confidence            23799999999831                       123455555544       67999887643

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.18  E-value=0.00086  Score=61.30  Aligned_cols=76  Identities=26%  Similarity=0.393  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+++||+||+|+||..++..+...|++|+++++ +++.+.+ +++     +....   +|..+.+-.    +++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l-----Ga~~v---~~~~~~~~~----~~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL-----GADDV---IDYKSGSVE----EQLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT-----TCSEE---EETTSSCHH----HHHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc-----CCCEE---EECCchHHH----HHHhh-cC
Confidence            6899999999999999999988889999998884 4444332 222     32221   244443322    22332 25


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999994

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.15  E-value=0.00027  Score=61.95  Aligned_cols=44  Identities=18%  Similarity=0.083  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACRE   68 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~   68 (319)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+.+++++
T Consensus       112 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          112 YEGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             STTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            35678999999997 7999999999999998 89999999876554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.14  E-value=0.0026  Score=58.08  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |+||..++..+...|+ +|+++++++++.+.+. .+     +...   .+|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GATE---CVNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCce---EecccccchhHHHHHHHHhC-
Confidence            6899999995 9999999998888999 8999999987765432 22     3221   134433 1234444444432 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +++|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999984

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.13  E-value=0.00061  Score=61.91  Aligned_cols=83  Identities=16%  Similarity=0.343  Sum_probs=65.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            357889999987 7899999999999997 899998642                   4677788888888888889998


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ..++.....+.       + +...|++|.+..
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEecC
Confidence            88887764322       2 447899888764

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.13  E-value=0.0023  Score=58.32  Aligned_cols=79  Identities=14%  Similarity=0.157  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +....   +|..+ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATEC---INPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSEE---ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCceE---eccccccccHHHHHHHHhC-
Confidence            5899999996 8999999988888898 8999999887766443 22     32211   24432 1234444444432 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +++|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.09  E-value=0.0026  Score=58.08  Aligned_cols=79  Identities=19%  Similarity=0.200  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |+||...+..+...|+ +|+++++++++.+.+. ++     +....   +|..+ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATDC---LNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSEE---ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCcEE---EccccccchHHHHHHHHhC-
Confidence            5899999996 8999999988888999 8999999987765432 22     32211   24432 1223344444432 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +++|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.03  E-value=0.0017  Score=58.48  Aligned_cols=101  Identities=12%  Similarity=0.079  Sum_probs=68.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+... ++     +....   +|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL-----GAEVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCSEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc-----CCCEE---EeCCCcCHHHHHHH----hCC
Confidence            6899999997 89999999888889999999999988766432 22     32222   34444433333322    234


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++|++|.++|..                       ..++..+..++.       .|+++.++...
T Consensus       232 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~G~~~  266 (340)
T 3s2e_A          232 GAHGVLVTAVSP-----------------------KAFSQAIGMVRR-------GGTIALNGLPP  266 (340)
T ss_dssp             SEEEEEESSCCH-----------------------HHHHHHHHHEEE-------EEEEEECSCCS
T ss_pred             CCCEEEEeCCCH-----------------------HHHHHHHHHhcc-------CCEEEEeCCCC
Confidence            899999998731                       124455555544       67999887643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.03  E-value=0.021  Score=51.14  Aligned_cols=122  Identities=11%  Similarity=0.038  Sum_probs=78.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh--CCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKE--IPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ....+.|.|+|| |.+|.+++..|+..|.  .|++.+++++.++.....+.+.  ++...-.....|   .+        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d---~~--------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKD---YS--------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSS---GG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCC---HH--------
Confidence            346778999998 9999999999999996  8999999998888777777653  222111111222   11        


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                         .....|++|..+|....+.    +.-.+.++.|.--    ++.+.+.+.+.    .+++.++++|.....
T Consensus        84 ---~~~~aDiVvi~aG~~~kpG----~tR~dL~~~N~~I----~~~i~~~i~~~----~p~a~vlvvtNPvdi  141 (331)
T 4aj2_A           84 ---VTANSKLVIITAGARQQEG----ESRLNLVQRNVNI----FKFIIPNVVKY----SPQCKLLIVSNPVDI  141 (331)
T ss_dssp             ---GGTTEEEEEECCSCCCCTT----CCGGGGHHHHHHH----HHHHHHHHHHH----CTTCEEEECSSSHHH
T ss_pred             ---HhCCCCEEEEccCCCCCCC----ccHHHHHHHHHHH----HHHHHHHHHHH----CCCeEEEEecChHHH
Confidence               1237899999999743321    1223455555544    44444444433    146789999887644

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.03  E-value=0.0017  Score=56.47  Aligned_cols=41  Identities=22%  Similarity=0.221  Sum_probs=38.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++++++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999997 89999999999999999999999998887766

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.00  E-value=0.0018  Score=58.87  Aligned_cols=77  Identities=14%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-c
Q 020927           28 SGLTAIVTGASSGIGTETARVLAL-RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-S  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-~  105 (319)
                      .|.+|||+||+|++|...+..+.. .|++|+++++++++.+.+.+ +     +....   +|..+  ++   .+++.+ .
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l-----Gad~v---i~~~~--~~---~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L-----GAHHV---IDHSK--PL---AAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T-----TCSEE---ECTTS--CH---HHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c-----CCCEE---EeCCC--CH---HHHHHHhc
Confidence            589999999999999987765554 47899999999877655422 2     32222   24433  22   233333 2


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|++|.++|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence            3479999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.00064  Score=60.89  Aligned_cols=75  Identities=21%  Similarity=0.277  Sum_probs=48.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      ++||+||+|++|...+..+...|++|+++++++++.+.+. ++     +....   +|..+.+  .+.+.++  ..+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~---i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEV---LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEE---EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcEE---EecCCcH--HHHHHHh--cCCccc
Confidence            7999999999999999988889999999999876655432 22     32221   2444432  1222222  124799


Q ss_pred             EEEEcccc
Q 020927          111 ILINNAGI  118 (319)
Q Consensus       111 ~lv~nag~  118 (319)
                      ++|.++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999983

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.98  E-value=0.0064  Score=55.02  Aligned_cols=79  Identities=24%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC--CHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS--SLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~v~~~~~~i~~  104 (319)
                      .|.+|||+|+ |++|...+..+...|+ +|+++++++++.+... ++     +.. ..  +|..  +.++..+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccchHHHHHHHHhC
Confidence            5899999996 8999999888888999 8999999987765432 22     322 12  2444  22333333333322


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                        +++|++|.++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999983

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.98  E-value=0.012  Score=53.06  Aligned_cols=124  Identities=17%  Similarity=0.082  Sum_probs=74.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhC-CCCceEEEEcCCCCHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEI-PNAKVQAMELDLSSLAS   94 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~   94 (319)
                      .+++.-+|.|+||+|+||+.++..|+....       .+++++.++  +.++....++.... +...-.....|   .  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~---~--   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTAD---P--   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESC---H--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCC---h--
Confidence            456677899999999999999999998643       699999865  34555555555432 22122222222   1  


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           95 VRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                       .+       .+...|++|..||....+. .+   -.+.++.|.-    +++.+.+.+.+..   .+...|+++|...
T Consensus        95 -~~-------a~~~advVvi~aG~prkpG-mt---R~DLl~~Na~----I~~~~~~~i~~~a---~~~~~vlvvsNPv  153 (345)
T 4h7p_A           95 -RV-------AFDGVAIAIMCGAFPRKAG-ME---RKDLLEMNAR----IFKEQGEAIAAVA---ASDCRVVVVGNPA  153 (345)
T ss_dssp             -HH-------HTTTCSEEEECCCCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSSSH
T ss_pred             -HH-------HhCCCCEEEECCCCCCCCC-CC---HHHHHHHhHH----HHHHHHHHHHhhc---cCceEEEEeCCCc
Confidence             11       1347899999999754332 22   2344555543    4555555554421   1245677787764

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0033  Score=57.02  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||+|| |++|...+..+... |++|+++++++++.+.+. ++     +....   +|..+.  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADHV---VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSEE---EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCEE---Eeccch--HHHHHHHHhC-C
Confidence            6899999999 89999998887778 999999999987766443 22     32221   354443  3333333322 1


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            279999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.94  E-value=0.0029  Score=56.44  Aligned_cols=40  Identities=28%  Similarity=0.396  Sum_probs=35.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      |+ +||+||+|++|...+..+...|++|+++++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999999889999999999998776654

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.93  E-value=0.0061  Score=54.53  Aligned_cols=121  Identities=17%  Similarity=0.131  Sum_probs=74.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC----CCCceEEEEcCCCCHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI----PNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      +|+.+.|.|+|| |.+|.+++..|+..|. +|++++++++.++.....+.+..    ...++.. ..|.   +       
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d~---~-------   71 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-ANDY---A-------   71 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESSG---G-------
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCCH---H-------
Confidence            456678999998 9999999999999998 99999999887765555554431    1223322 1221   1       


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                          .+...|++|..+|....+. .+   -.+.+..|.    .+++.+.+.+.+..    ..+.++++|.....
T Consensus        72 ----a~~~aDiVIiaag~p~k~G-~~---R~dl~~~N~----~i~~~i~~~i~~~~----p~a~iivvtNPvd~  129 (324)
T 3gvi_A           72 ----AIEGADVVIVTAGVPRKPG-MS---RDDLLGINL----KVMEQVGAGIKKYA----PEAFVICITNPLDA  129 (324)
T ss_dssp             ----GGTTCSEEEECCSCCCC---------CHHHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             ----HHCCCCEEEEccCcCCCCC-CC---HHHHHHhhH----HHHHHHHHHHHHHC----CCeEEEecCCCcHH
Confidence                1236899999999743321 11   123344444    44555555554432    46788988886644

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.90  E-value=0.0024  Score=61.53  Aligned_cols=63  Identities=14%  Similarity=0.231  Sum_probs=53.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+.+.+|..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            368899999987 6999999999999997 899988643                   5778888888888888888888


Q ss_pred             EcCC
Q 020927           86 ELDL   89 (319)
Q Consensus        86 ~~Dl   89 (319)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.88  E-value=0.021  Score=50.76  Aligned_cols=122  Identities=18%  Similarity=0.181  Sum_probs=76.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC--HHHHHHHHHHHHhhC----CCCceEEEEcCCCCHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN--MAACREVKKAIVKEI----PNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~--~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      |.++.+.+.|+|+ |.+|.+++..|+..|. +|++.+++  ++.++.....+....    ...++.. ..|   .     
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~-----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y-----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G-----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H-----
Confidence            5567788999997 9999999999999998 99999999  555554444443321    1223332 112   1     


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                            +.+...|++|.++|....+. .   .-.+.++.|.-    +++.+.+.+.+..    +++.++++|.....
T Consensus        74 ------~a~~~aDvVIiaag~p~kpg-~---~R~dl~~~N~~----i~~~i~~~i~~~~----p~a~vlvvsNPvd~  132 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIARKPG-M---SRDDLVATNSK----IMKSITRDIAKHS----PNAIIVVLTNPVDA  132 (315)
T ss_dssp             ------GGGTTCSEEEECCSCCCCTT-C---CHHHHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             ------HHhCCCCEEEEeCCCCCCCC-C---CHHHHHHHHHH----HHHHHHHHHHHhC----CCeEEEECCChHHH
Confidence                  12347899999999743321 1   12334455544    4444444444432    46788888876544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.86  E-value=0.0022  Score=58.23  Aligned_cols=85  Identities=18%  Similarity=0.188  Sum_probs=51.3

Q ss_pred             CC-CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH--HHHHHHHHHHHh
Q 020927           28 SG-LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL--ASVRKFASEFKS  104 (319)
Q Consensus        28 ~~-k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~--~~v~~~~~~i~~  104 (319)
                      .| .+|||+||+|++|...+..+...|++|++++++.++.++..+.+++.  +....+   |..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~~vi---~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVI---TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEE---EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCeEEE---ecCccchHHHHHHHHHHhh
Confidence            57 99999999999999998887788999988887655422222222222  322111   22110  122222333220


Q ss_pred             -cCCCccEEEEccc
Q 020927          105 -SGLPLNILINNAG  117 (319)
Q Consensus       105 -~~~~id~lv~nag  117 (319)
                       ..+++|++|.++|
T Consensus       241 ~~~~g~Dvvid~~G  254 (364)
T 1gu7_A          241 QSGGEAKLALNCVG  254 (364)
T ss_dssp             HHTCCEEEEEESSC
T ss_pred             ccCCCceEEEECCC
Confidence             1247999999998

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0033  Score=57.33  Aligned_cols=74  Identities=18%  Similarity=0.252  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+|||+|+ |+||...+..+...|++|+++++++++.+.+.+ +     +...   .+|..+.+.++    ++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~~---vi~~~~~~~~~----~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GADE---VVNSRNADEMA----AHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE---EEETTCHHHHH----TTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCcE---EeccccHHHHH----Hhh---c
Confidence            5899999998 889999998888899999999998877665432 2     3222   13555544322    222   4


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.84  E-value=0.017  Score=50.98  Aligned_cols=41  Identities=27%  Similarity=0.269  Sum_probs=36.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      ++|.|.|+ |.+|.++|..|++.|++|++++|+++.++...+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~   56 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   56 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            57889988 899999999999999999999999988776433

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.84  E-value=0.0012  Score=56.17  Aligned_cols=72  Identities=15%  Similarity=0.092  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+.++|.|+ |.+|+.+++.|.+.|. |++++++++.++...         ..+.++.+|.++++.+.++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc------Ccch
Confidence            457899997 8999999999999999 999999987665432         1377889999998766543      1236


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            789988765

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.78  E-value=0.0034  Score=57.41  Aligned_cols=81  Identities=21%  Similarity=0.191  Sum_probs=54.4

Q ss_pred             CCCCEEEEeC-CCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTG-ASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItG-as~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..|.++||.| |+|++|...+..+...|++|+++++++++.+.+.+ +     +....   +|..+.+-.++ +.++...
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~~---~~~~~~~~~~~-v~~~t~~  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-----GAVHV---CNAASPTFMQD-LTEALVS  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-----TCSCE---EETTSTTHHHH-HHHHHHH
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-----CCcEE---EeCCChHHHHH-HHHHhcC
Confidence            3688999997 89999999998888889999999999887665432 2     32222   24444332222 2222111


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       .++|++|.++|.
T Consensus       239 -~g~d~v~d~~g~  250 (379)
T 3iup_A          239 -TGATIAFDATGG  250 (379)
T ss_dssp             -HCCCEEEESCEE
T ss_pred             -CCceEEEECCCc
Confidence             269999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.76  E-value=0.0016  Score=59.10  Aligned_cols=74  Identities=14%  Similarity=0.172  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCH-HHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL-ASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~i~~~~  106 (319)
                      .|.+|||+|| |++|...+..+...|++|+++++++++.+.+.+ +     +....   +|..+. +.    .+++.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v---~~~~~~~~~----~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADHY---IATLEEGDW----GEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEE---EEGGGTSCH----HHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCEE---EcCcCchHH----HHHhh---
Confidence            6899999999 999999998888899999999998877654432 2     32221   233332 21    22222   


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            489999999985

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.75  E-value=0.0027  Score=61.08  Aligned_cols=63  Identities=14%  Similarity=0.227  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      ++++++|+|.|+ ||+|.++++.|+..|. +|.+++.+                   ..+++.+.+.+.+.+|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            467899999985 6899999999999998 79998543                   25788888889888888888888


Q ss_pred             EcCC
Q 020927           86 ELDL   89 (319)
Q Consensus        86 ~~Dl   89 (319)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.74  E-value=0.0044  Score=54.78  Aligned_cols=74  Identities=19%  Similarity=0.239  Sum_probs=53.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..++.|++++|.|+ |+||+++++.|...|++|++++|+.++.+...+    .  +  +..+.     ..++.+++    
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~--g--~~~~~-----~~~l~~~l----  213 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----M--G--LVPFH-----TDELKEHV----  213 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--T--CEEEE-----GGGHHHHS----
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--C--CeEEc-----hhhHHHHh----
Confidence            35789999999996 899999999999999999999999876543321    1  2  22221     12233322    


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                         ...|++|.+...
T Consensus       214 ---~~aDvVi~~~p~  225 (300)
T 2rir_A          214 ---KDIDICINTIPS  225 (300)
T ss_dssp             ---TTCSEEEECCSS
T ss_pred             ---hCCCEEEECCCh
Confidence               368999999884

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.72  E-value=0.0047  Score=53.27  Aligned_cols=42  Identities=19%  Similarity=0.322  Sum_probs=36.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREV   69 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~   69 (319)
                      +++| +++|.|+ ||.|++++..|++.|. +|+++.|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4578 8999997 8999999999999998 899999998776543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.70  E-value=0.084  Score=47.15  Aligned_cols=119  Identities=13%  Similarity=0.029  Sum_probs=77.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC--C-CCceEEEEcCCCCHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEI--P-NAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~--~-~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++|.|+|+ |.+|.+++..|+..|.  .|++.+++++.++.....+....  + ..++. ...|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHHH-----------
Confidence            3567999999 9999999999999996  89999999988887666665431  1 11222 2233322           


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                         +...|++|..+|....+. .   .-.+.+..|.-    +.+.+.+.+.+.    .+++.++++|.....
T Consensus        87 ---~~daDiVIitaG~p~kpG-~---tR~dll~~N~~----I~k~i~~~I~k~----~P~a~ilvvtNPvdi  143 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEG-E---SRLNLVQRNVN----IFKFIIPNIVKH----SPDCLKELHPELGTD  143 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSS-C---CTTGGGHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHHH
T ss_pred             ---hCCCCEEEEeCCCCCCCC-C---CHHHHHHhhHH----HHHHHHHHHHhh----CCCceEEeCCCccHH
Confidence               347899999999753322 1   12234444443    444444444443    246789988886644

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.69  E-value=0.0023  Score=58.00  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+|+ |+||...+..+...|++|+++++++++.+...+.    . +....   .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~----l-Ga~~v---i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD----L-GADDY---VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT----S-CCSCE---EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----c-CCcee---eccccHHHHH-------HhcC
Confidence            6899999995 9999999988888899999999987765543322    2 32211   2444443222       2234


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.69  E-value=0.0036  Score=55.80  Aligned_cols=73  Identities=15%  Similarity=0.280  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+||+|++|...+..+...|++|+.++++. +. +..+++     +...   .+|..+.+.+.+       ...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l-----Ga~~---~i~~~~~~~~~~-------~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL-----GAEQ---CINYHEEDFLLA-------IST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH-----TCSE---EEETTTSCHHHH-------CCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc-----CCCE---EEeCCCcchhhh-------hcc
Confidence            689999999999999999999999999999888543 32 233332     3222   134444432221       224


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|++|.++|
T Consensus       215 g~D~v~d~~g  224 (321)
T 3tqh_A          215 PVDAVIDLVG  224 (321)
T ss_dssp             CEEEEEESSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.62  E-value=0.0026  Score=58.17  Aligned_cols=79  Identities=9%  Similarity=0.101  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |+||...+..+...|+ +|+++++++++++.+ +++     +...   .+|..+ .+++.+.+.++.  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~i~~~~--  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNE---FVNPKDHDKPIQEVIVDLT--  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCE---EECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcE---EEccccCchhHHHHHHHhc--
Confidence            5899999998 9999999988888899 799999998876633 221     3222   134432 223444444443  


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|++|.++|.
T Consensus       261 ~gg~D~vid~~g~  273 (378)
T 3uko_A          261 DGGVDYSFECIGN  273 (378)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2389999999983

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.61  E-value=0.0064  Score=53.54  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=38.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACRE   68 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~   68 (319)
                      .++.|++++|.|+ |+||+++++.|...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            4789999999995 899999999999999999999999876543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.57  E-value=0.0076  Score=54.89  Aligned_cols=79  Identities=15%  Similarity=0.147  Sum_probs=52.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..|.+|||.||+|++|...+..+...|++|+.+. ++++.+. .+++     +... .  +|..+.+ +.+.+.++.  .
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l-----Ga~~-v--i~~~~~~-~~~~v~~~t--~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR-----GAEE-V--FDYRAPN-LAQTIRTYT--K  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT-----TCSE-E--EETTSTT-HHHHHHHHT--T
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc-----CCcE-E--EECCCch-HHHHHHHHc--c
Confidence            4689999999999999999999889999988886 5555442 2222     3221 1  2444443 222233332  3


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            469999999994

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.56  E-value=0.0024  Score=57.59  Aligned_cols=69  Identities=17%  Similarity=0.253  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+|||+|+ |+||...+..+...|++|+++++++++.+.+.+ +     +....+     .+.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M-----GVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T-----TCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c-----CCCeec-----CCHHHHhc----------
Confidence            6899999997 899999998888899999999998877664322 2     322222     33332211          


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.53  E-value=0.032  Score=49.16  Aligned_cols=116  Identities=14%  Similarity=0.083  Sum_probs=73.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh---CC-CCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKE---IP-NAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +|.|+|| |.+|.+++..|+..|.  +|++++++++.++.....+.+.   ++ ..++.. ..|   .+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~-t~d---~~-----------   65 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-GAD---YS-----------   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-ESC---GG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE-eCC---HH-----------
Confidence            5889999 9999999999999997  8999999998876444444332   21 122222 122   11           


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+...|++|..+|....+. .+   -.+.++.|    ..+++.+.+.+.+.    .+++.++++|.....
T Consensus        66 a~~~aDiVViaag~~~kpG-~~---R~dl~~~N----~~i~~~i~~~i~~~----~p~a~iivvsNPvd~  123 (294)
T 1oju_A           66 LLKGSEIIVVTAGLARKPG-MT---RLDLAHKN----AGIIKDIAKKIVEN----APESKILVVTNPMDV  123 (294)
T ss_dssp             GGTTCSEEEECCCCCCCSS-CC---HHHHHHHH----HHHHHHHHHHHHTT----STTCEEEECSSSHHH
T ss_pred             HhCCCCEEEECCCCCCCCC-Cc---HHHHHHHH----HHHHHHHHHHHHhh----CCCeEEEEeCCcchH
Confidence            1236799999999743321 11   12234444    34566666666554    247788988876643

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.53  E-value=0.0039  Score=58.07  Aligned_cols=81  Identities=19%  Similarity=0.279  Sum_probs=61.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC----------C---------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVR----------N---------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r----------~---------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.+++.          .         ..+++.+.+.+.+.+|..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46888999987 7899999999999998 7888853          2         146777788888888888888888


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .++.+..  ..++       ...|++|.+..
T Consensus       117 ~~i~~~~--~~~~-------~~~DlVi~~~D  138 (434)
T 1tt5_B          117 NKIQDFN--DTFY-------RQFHIIVCGLD  138 (434)
T ss_dssp             SCGGGBC--HHHH-------TTCSEEEECCS
T ss_pred             cccchhh--HHHh-------cCCCEEEECCC
Confidence            7776532  1222       26788888754

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.50  E-value=0.0048  Score=57.16  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=52.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +..|+|.|. |.+|+.+++.|.+.|..|++++++++.++...+    .    .+.++.+|.++++.+.++      ...+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~a------gi~~   68 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESA------GAAK   68 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHT------TTTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhc------CCCc
Confidence            346889986 779999999999999999999999987765432    1    244566777776655443      1124


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|++|.+.+
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            566665554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.47  E-value=0.0036  Score=56.71  Aligned_cols=98  Identities=12%  Similarity=0.127  Sum_probs=63.9

Q ss_pred             CCEEEEeCCCCchhHHH-HHHH-HHCCCE-EEEEeCCHH---HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTET-ARVL-ALRGVH-VVMAVRNMA---ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~ai-a~~L-a~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+|||+|| |++|... +..+ ...|++ |++++++++   +.+.+ +++     +  ...+  |..+.+ +.+ +.++
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----G--a~~v--~~~~~~-~~~-i~~~  239 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----D--ATYV--DSRQTP-VED-VPDV  239 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----T--CEEE--ETTTSC-GGG-HHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----C--Cccc--CCCccC-HHH-HHHh
Confidence            399999999 9999998 6655 567986 999999876   65543 222     3  2233  554432 333 4444


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                         .+++|++|.++|..                       ..++..+..++.       .|+++.++...
T Consensus       240 ---~gg~Dvvid~~g~~-----------------------~~~~~~~~~l~~-------~G~iv~~g~~~  276 (357)
T 2b5w_A          240 ---YEQMDFIYEATGFP-----------------------KHAIQSVQALAP-------NGVGALLGVPS  276 (357)
T ss_dssp             ---SCCEEEEEECSCCH-----------------------HHHHHHHHHEEE-------EEEEEECCCCC
T ss_pred             ---CCCCCEEEECCCCh-----------------------HHHHHHHHHHhc-------CCEEEEEeCCC
Confidence               23799999999831                       023444555544       67999988754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.46  E-value=0.0057  Score=55.72  Aligned_cols=79  Identities=15%  Similarity=0.151  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|||+|+ |+||...+..+...|+ +|+++++++++.+.+. ++     +... .  +|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-C--LNPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhC-
Confidence            5899999996 8999999888878898 8999999887765432 22     3221 1  24332 1223333443322 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                       +++|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.42  E-value=0.021  Score=51.00  Aligned_cols=120  Identities=14%  Similarity=0.130  Sum_probs=74.5

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC----CCCceEEEEcCCCCHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI----PNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      |+.++|.|+|+ |.+|.+++..|+..|. +|++++++++.++.....+.+..    ...++.. ..|   .+        
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-t~d---~~--------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-TND---YK--------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-ESC---GG--------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-cCC---HH--------
Confidence            34567899995 9999999999999988 99999999887765555554421    1222321 122   11        


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                         .+...|++|..+|....+. .+   -.+.+..|.-    +++.+.+.+.+..    +.+.++++|.....
T Consensus        70 ---a~~~aDvVIi~ag~p~k~G-~~---R~dl~~~N~~----i~~~i~~~i~~~~----p~a~vivvtNPvd~  127 (321)
T 3p7m_A           70 ---DLENSDVVIVTAGVPRKPG-MS---RDDLLGINIK----VMQTVGEGIKHNC----PNAFVICITNPLDI  127 (321)
T ss_dssp             ---GGTTCSEEEECCSCCCCTT-CC---HHHHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             ---HHCCCCEEEEcCCcCCCCC-CC---HHHHHHHhHH----HHHHHHHHHHHHC----CCcEEEEecCchHH
Confidence               1236899999999743321 11   2233444443    4455555544432    36788888876544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.42  E-value=0.0077  Score=54.36  Aligned_cols=103  Identities=14%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||+|+ |+||...+..+...|+ +|+++++++++.+.. +++     +...   .+|..+.+-.++ +.++.. .
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~---vi~~~~~~~~~~-v~~~t~-g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GATD---IINYKNGDIVEQ-ILKATD-G  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCCE---EECGGGSCHHHH-HHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCce---EEcCCCcCHHHH-HHHHcC-C
Confidence            5899999985 8999999988888898 799999998776543 222     3222   134433332222 222211 1


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      .++|++|.++|..                       ..++..+..++.       .|+++.++...
T Consensus       234 ~g~D~v~d~~g~~-----------------------~~~~~~~~~l~~-------~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDV-----------------------HTFAQAVKMIKP-------GSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCT-----------------------THHHHHHHHEEE-------EEEEEECCCCC
T ss_pred             CCCCEEEECCCCh-----------------------HHHHHHHHHHhc-------CCEEEEecccC
Confidence            2699999999841                       133445555544       67999888643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.40  E-value=0.0053  Score=56.69  Aligned_cols=43  Identities=16%  Similarity=0.037  Sum_probs=38.3

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      ++.+++|+|+|+ |.+|+++++.+...|++|+++++++..++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            578999999996 8999999999999999999999998776554

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.38  E-value=0.0068  Score=57.01  Aligned_cols=75  Identities=13%  Similarity=0.201  Sum_probs=59.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+.++|.|+ |.+|+.+|+.|.++|..|++.+++++.++.+.+.+       .+..+..|.++++.++++=      ...
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Ag------i~~   68 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAG------AQD   68 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHT------TTT
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcC------CCc
Confidence            356888887 68999999999999999999999998877655432       4778899999998877661      126


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|.+|...+
T Consensus        69 ad~~ia~t~   77 (461)
T 4g65_A           69 ADMLVAVTN   77 (461)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEEcC
Confidence            788887765

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.37  E-value=0.0045  Score=60.16  Aligned_cols=83  Identities=22%  Similarity=0.320  Sum_probs=60.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM-------------------AACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |.+.+|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+.+.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            46788999987 8999999999999998 799987422                   45666777777777788888888


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .+++.......++       ..+|+||.+..
T Consensus        94 ~~i~~~~~~~~~~-------~~~DlVvda~D  117 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------RQFILVMNALD  117 (640)
T ss_dssp             SCTTSTTSCHHHH-------TTCSEEEECCS
T ss_pred             cccchhhhhHhhh-------cCCCEEEECCC
Confidence            7775432112222       26788887754

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.34  E-value=0.012  Score=53.94  Aligned_cols=79  Identities=23%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||.|+ |+||...+..+...|+ +|+++++++++++.+. .+     +.  ..  +|.++.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga--~~--i~~~~~~~~~~~v~~~t~-g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GF--EI--ADLSLDTPLHEQIAALLG-E  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TC--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-----CC--cE--EccCCcchHHHHHHHHhC-C
Confidence            6899999995 9999999888778898 7999999987766442 22     43  22  355443323333333221 2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (398)
T 1kol_A          253 PEVDCAVDAVGF  264 (398)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCCCEEEECCCC
Confidence            369999999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.33  E-value=0.015  Score=52.77  Aligned_cols=78  Identities=12%  Similarity=0.103  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|++|||+|+ |+||...+..+...|+ +|+++++++++.+.+. .+     +....   +|..+.+ +.+.+.++.  .
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~~-~~~~~~~~~--~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GATHV---INSKTQD-PVAAIKEIT--D  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCSEE---EETTTSC-HHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCCEE---ecCCccC-HHHHHHHhc--C
Confidence            5899999995 8999999888777898 6999999987766442 22     32221   2333322 222222222  2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999983

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.30  E-value=0.0082  Score=54.56  Aligned_cols=46  Identities=22%  Similarity=0.269  Sum_probs=41.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      +++||+++|.|+ |.+|..+|+.|.+.|++|++.+++.+.+++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            799999999997 7899999999999999999999998877766554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.29  E-value=0.052  Score=48.53  Aligned_cols=122  Identities=11%  Similarity=0.150  Sum_probs=75.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +-+.++|.|+|| |.+|..++..|+..+.  .|++.++++++++.....+....+ ...+.... |  +.+         
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~---------   72 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS---------   72 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH---------
Confidence            445578999999 9999999999999885  799999999888776666654321 12233322 2  111         


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                        .+...|++|..+|....+. .+   -...+..|.    .+++.+.+.+.+..    ..+.||++|.....
T Consensus        73 --a~~~aDvVii~ag~~~k~g-~~---R~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           73 --DAKDADLVVITAGAPQKPG-ET---RLDLVNKNL----KILKSIVDPIVDSG----FNGIFLVAANPVDI  130 (326)
T ss_dssp             --GGGGCSEEEECCCCC------C---HHHHHHHHH----HHHHHHHHHHHHHT----CCSEEEECSSSHHH
T ss_pred             --HhCCCCEEEEcCCCCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEeCCcHHH
Confidence              1236799999999743221 11   112333343    34444555444432    47789988876654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.26  E-value=0.07  Score=47.44  Aligned_cols=121  Identities=12%  Similarity=0.127  Sum_probs=74.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ++..+|.|+|| |.+|..++..|+..|.  .|+++++++++++.....+....+  +..+.... |  +.+         
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~---------   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS---------   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH---------
Confidence            45578999999 9999999999999884  899999998877754444443221  12333322 2  111         


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                        .+...|++|..+|....+. .+   -...+..|    ..+++.+.+.+.+..    .++.||++|.....
T Consensus        71 --a~~~aDvVvi~ag~~~~~g-~~---r~dl~~~n----~~i~~~i~~~i~~~~----p~a~viv~tNPv~~  128 (317)
T 3d0o_A           71 --DCHDADLVVICAGAAQKPG-ET---RLDLVSKN----LKIFKSIVGEVMASK----FDGIFLVATNPVDI  128 (317)
T ss_dssp             --GGTTCSEEEECCCCCCCTT-CC---HHHHHHHH----HHHHHHHHHHHHHTT----CCSEEEECSSSHHH
T ss_pred             --HhCCCCEEEECCCCCCCCC-Cc---HHHHHHHH----HHHHHHHHHHHHHhC----CCcEEEEecCcHHH
Confidence              1237899999999743321 11   11223333    334455555554432    46788888776644

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.26  E-value=0.013  Score=51.20  Aligned_cols=85  Identities=14%  Similarity=0.168  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHH--------HhhCCCCceEEEEcCCCCHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV---HVVMAVRNMAACREVKKAI--------VKEIPNAKVQAMELDLSSLASVR   96 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~---~Vv~~~r~~~~~~~~~~~~--------~~~~~~~~v~~~~~Dl~~~~~v~   96 (319)
                      +.+++.|.|+ |.+|.++++.|++.|+   +|++++|++++++...+..        .....+..+.++.+   .++.+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~   77 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIK   77 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHH
Confidence            3467888887 8999999999999998   8999999998877665531        11112334555554   345667


Q ss_pred             HHHHHHHhc-CCCcc-EEEEccc
Q 020927           97 KFASEFKSS-GLPLN-ILINNAG  117 (319)
Q Consensus        97 ~~~~~i~~~-~~~id-~lv~nag  117 (319)
                      ++++++... . +.+ ++|++++
T Consensus        78 ~vl~~l~~~~l-~~~~iiiS~~a   99 (280)
T 3tri_A           78 MVCEELKDILS-ETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHH-TTTCEEEECCT
T ss_pred             HHHHHHHhhcc-CCCeEEEEecC
Confidence            777777553 3 234 6776654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.25  E-value=0.051  Score=48.24  Aligned_cols=119  Identities=15%  Similarity=0.085  Sum_probs=70.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-C--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALR-G--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.|+||+|.+|.+++..|+.+ +  ..|+++++++ ..+.....+.......++..+..  ++.   .+.+       .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~--~~~---~~~~-------~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSG--EDA---TPAL-------E   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECS--SCC---HHHH-------T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecC--CCc---HHHh-------C
Confidence            5889999999999999999886 5  3799999987 34444444443211112222211  111   1112       2


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ..|++|..+|....+.    ..-.+.++.|.--...+.+.+..+    .    +++.++++|.....
T Consensus        69 ~aDivii~ag~~rkpG----~~R~dll~~N~~I~~~i~~~i~~~----~----p~a~vlvvtNPvd~  123 (312)
T 3hhp_A           69 GADVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVQQVAKT----C----PKACIGIITNPVNT  123 (312)
T ss_dssp             TCSEEEECCSCSCCTT----CCHHHHHHHHHHHHHHHHHHHHHH----C----TTSEEEECSSCHHH
T ss_pred             CCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHH----C----CCcEEEEecCcchh
Confidence            7899999999743221    123345555654444444444433    1    36789988876543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.23  E-value=0.024  Score=50.48  Aligned_cols=45  Identities=20%  Similarity=0.172  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      .+.+.++|.|.|+ |.+|..+++.|++.|++|++++|++++.+.+.
T Consensus        27 ~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           27 SDPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             --CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            3445678888865 89999999999999999999999998776654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.22  E-value=0.0053  Score=55.48  Aligned_cols=81  Identities=17%  Similarity=0.201  Sum_probs=60.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeC----------C---------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVR----------N---------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r----------~---------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |++.+|+|.|+ ||+|.++++.|+..|. ++.+++.          .         ..+++.+.+.+.+.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            57889999985 7999999999999998 7888852          2         356788888888888888888887


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .++.+  ....++       ...|++|.+..
T Consensus       113 ~~~~~--~~~~~~-------~~~dvVv~~~d  134 (346)
T 1y8q_A          113 EDIEK--KPESFF-------TQFDAVCLTCC  134 (346)
T ss_dssp             SCGGG--CCHHHH-------TTCSEEEEESC
T ss_pred             cccCc--chHHHh-------cCCCEEEEcCC
Confidence            76653  112222       26788887643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.21  E-value=0.026  Score=49.31  Aligned_cols=41  Identities=15%  Similarity=0.170  Sum_probs=36.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      ++|.|.|++|.+|.++++.|++.|++|++++|+++..+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            57999999999999999999999999999999988776554

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.20  E-value=0.013  Score=53.89  Aligned_cols=79  Identities=18%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||.|+ |+||...+..+...|+ +|+++++++++.+.+.    +.  +.  ..  +|..+.+.+.+.+.++.. .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~l--Ga--~~--i~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DA--GF--ET--IDLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TT--TC--EE--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc--CC--cE--EcCCCcchHHHHHHHHhC-C
Confidence            6899999996 9999999888777899 8999999987765432    11  33  22  354443221222222221 1


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.19  E-value=0.017  Score=51.85  Aligned_cols=103  Identities=16%  Similarity=0.207  Sum_probs=65.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.++||.|+ |++|...+..+... |.+|+++++++++.+.+. ++     +....+   |..+ + ..+.+.++.. .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~l-----Ga~~~i---~~~~-~-~~~~v~~~t~-g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EV-----GADAAV---KSGA-G-AADAIRELTG-G  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HT-----TCSEEE---ECST-T-HHHHHHHHHG-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc-----CCCEEE---cCCC-c-HHHHHHHHhC-C
Confidence            6899999998 99999888776666 679999999988766442 22     322221   2222 2 2222222221 1


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .++|++|.++|..                       ..++..+..++.       .|+++.++...+
T Consensus       238 ~g~d~v~d~~G~~-----------------------~~~~~~~~~l~~-------~G~iv~~G~~~~  274 (345)
T 3jv7_A          238 QGATAVFDFVGAQ-----------------------STIDTAQQVVAV-------DGHISVVGIHAG  274 (345)
T ss_dssp             GCEEEEEESSCCH-----------------------HHHHHHHHHEEE-------EEEEEECSCCTT
T ss_pred             CCCeEEEECCCCH-----------------------HHHHHHHHHHhc-------CCEEEEECCCCC
Confidence            2799999999841                       134455555554       679999886543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.13  E-value=0.081  Score=47.08  Aligned_cols=118  Identities=12%  Similarity=0.121  Sum_probs=73.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+|.|+|| |.+|..++..|+..+.  .|++.++++++++.....+....+ ...+.... |  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HHh
Confidence            57999999 9999999999999885  799999999888876666655421 12232222 2  11           123


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|..+|....+. .+.   .+.+..|.    .+++.+.+.+.+.    ...+.||++|.....
T Consensus        71 ~~aDvVii~ag~~~~~g-~~R---~dl~~~n~----~i~~~i~~~i~~~----~p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-ESR---LDLVNKNL----NILSSIVKPVVDS----GFDGIFLVAANPVDI  126 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHT----TCCSEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHh----CCCeEEEEeCCcHHH
Confidence            47899999999743321 111   12333333    3455555555543    247788888876654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.03  E-value=0.0089  Score=54.08  Aligned_cols=36  Identities=25%  Similarity=0.453  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|.+|||+||+|++|...+..+...|++++++.++.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            689999999999999999887777899887776543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.01  E-value=0.26  Score=43.62  Aligned_cols=119  Identities=14%  Similarity=0.126  Sum_probs=73.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCC--ceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNA--KVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .++|.|+|+ |.+|..++..|+..|.  +|++.+++++.++.....+....+..  .+.... |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            368999999 9999999999999884  79999999886665555554433211  233322 2  11           1


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+...|++|.++|....+. .+.   ...+..|    ..+.+.+.+.+.+..    +.+.++++|.....
T Consensus        71 al~~aDvViia~~~~~~~g-~~r---~dl~~~n----~~i~~~i~~~i~~~~----p~a~~iv~tNPv~~  128 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPG-ETR---LDLVDKN----IAIFRSIVESVMASG----FQGLFLVATNPVDI  128 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTT-TCS---GGGHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSSHHH
T ss_pred             HhCCCCEEEEcCCCCCCCC-CCH---HHHHHcC----hHHHHHHHHHHHHHC----CCCEEEEeCCchHH
Confidence            2337899999999754332 111   2233334    344555555554432    35677777765543

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.98  E-value=0.025  Score=53.25  Aligned_cols=130  Identities=12%  Similarity=0.093  Sum_probs=73.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHHHh----hCCCCceEEEEcCCCCHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-----GVHVVMAVRNMAACREVKKAIVK----EIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      |+.++|.|.||++..|.+++..|+.+     +.+|++.+++++.++...+....    .....++.. .   +|   ..+
T Consensus        26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~-t---~D---~~e   98 (472)
T 1u8x_X           26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-T---TD---PEE   98 (472)
T ss_dssp             CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-E---SC---HHH
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEE-E---CC---HHH
Confidence            44668999999998888899999998     55799999999887764432221    111223333 1   22   222


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCcccCcc-cccc-----hhhhh-------hhHHHHHHHHHHHHHhcccccCCCCCe
Q 020927           98 FASEFKSSGLPLNILINNAGIMATPFMLSKD-NIEL-----QFATN-------HIGHFLLTNLLLETMGKTARESSKEGR  164 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~~~~~~~~-~~~~-----~~~vn-------~~~~~~l~~~~~~~l~~~~~~~~~~~~  164 (319)
                      .++       ..|+||..+|....+. .+.+ .+..     ..+++       ..-+.-+++.+.+.+.+..    +++-
T Consensus        99 al~-------~AD~VViaag~~~~~g-~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~----P~A~  166 (472)
T 1u8x_X           99 AFT-------DVDFVMAHIRVGKYAM-RALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS----PDAW  166 (472)
T ss_dssp             HHS-------SCSEEEECCCTTHHHH-HHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC----TTCE
T ss_pred             HHc-------CCCEEEEcCCCccccc-cchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC----CCeE
Confidence            222       6799999999643211 0100 0000     01111       1222334555556665542    4678


Q ss_pred             EEEeCCccccc
Q 020927          165 IVNVSSRRHQF  175 (319)
Q Consensus       165 ii~isS~~~~~  175 (319)
                      +|++|......
T Consensus       167 ii~~TNPvdi~  177 (472)
T 1u8x_X          167 MLNYSNPAAIV  177 (472)
T ss_dssp             EEECCSCHHHH
T ss_pred             EEEeCCcHHHH
Confidence            88888776553

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.97  E-value=0.03  Score=52.68  Aligned_cols=129  Identities=11%  Similarity=0.075  Sum_probs=74.3

Q ss_pred             CCEEEEeCCCC-chhHHHHHHHHHC----CCEEEEEeCCHHHHHHHHHHHHhh---C-CCCceEEEEcCCCCHHHHHHHH
Q 020927           29 GLTAIVTGASS-GIGTETARVLALR----GVHVVMAVRNMAACREVKKAIVKE---I-PNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        29 ~k~vlItGas~-gIG~aia~~La~~----G~~Vv~~~r~~~~~~~~~~~~~~~---~-~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .++|.|.||++ |.|.+++..|+..    |.+|++.+++++.++...+.....   . ...++.. .   +|   ..+.+
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~-t---tD---~~eal   75 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-T---MN---LDDVI   75 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-E---SC---HHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEE-E---CC---HHHHh
Confidence            46799999999 8999999999864    779999999998877654443321   1 1223332 1   22   22222


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcc-c-----Ccccc----cchhhh--------hhhHHHHHHHHHHHHHhcccccCCC
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFM-L-----SKDNI----ELQFAT--------NHIGHFLLTNLLLETMGKTARESSK  161 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~-~-----~~~~~----~~~~~v--------n~~~~~~l~~~~~~~l~~~~~~~~~  161 (319)
                      +       ..|+||..+|....... .     ...++    .++...        ...-..-+++.+.+.+.+..    .
T Consensus        76 ~-------dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~----P  144 (480)
T 1obb_A           76 I-------DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS----P  144 (480)
T ss_dssp             T-------TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC----T
T ss_pred             C-------CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC----C
Confidence            2       67999999985321000 0     00001    111111        12334456666666666542    4


Q ss_pred             CCeEEEeCCccccc
Q 020927          162 EGRIVNVSSRRHQF  175 (319)
Q Consensus       162 ~~~ii~isS~~~~~  175 (319)
                      ++-+|++|......
T Consensus       145 ~A~ii~~TNPvdi~  158 (480)
T 1obb_A          145 KAWYLQAANPIFEG  158 (480)
T ss_dssp             TCEEEECSSCHHHH
T ss_pred             CeEEEEeCCcHHHH
Confidence            66788888766543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.93  E-value=0.021  Score=50.27  Aligned_cols=117  Identities=14%  Similarity=0.071  Sum_probs=76.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEE-EcCCCCHHHHHHHHHHHHhc
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAM-ELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~-~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .|.|+|| |+||..+|..|+.++.  ++++.+.+++.++.....+.+..+  +...... ..|..              .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~--------------~   66 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--------------L   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGG--------------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHH--------------H
Confidence            4788895 9999999999999884  799999999877766666655321  2222222 22321              1


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...-|++|..||....+. .+   -.+.++.|.    .+++.+.+.+.+..    .++.++++|...-.
T Consensus        67 ~~~aDvVvitAG~prkpG-mt---R~dLl~~Na----~I~~~i~~~i~~~~----p~aivlvvsNPvd~  123 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARKPG-MT---RLDLAHKNA----GIIKDIAKKIVENA----PESKILVVTNPMDV  123 (294)
T ss_dssp             GTTCSEEEECCCCCCCSS-SC---HHHHHHHHH----HHHHHHHHHHHTTS----TTCEEEECSSSHHH
T ss_pred             hCCCCEEEEecCCCCCCC-Cc---hHHHHHHHH----HHHHHHHHHHHhcC----CceEEEEecCcchh
Confidence            236799999999754332 22   233455554    46666666666543    46788888886643

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.92  E-value=0.041  Score=48.66  Aligned_cols=117  Identities=18%  Similarity=0.130  Sum_probs=64.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.|+|| |.+|..++..|+..|.  +|++++++++.++.....+....+- ....... +  +.+           ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CHH-----------HhC
Confidence            6889998 9999999999999998  8999999988776544444332110 1111111 1  211           123


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ..|++|.++|....+. .+   -.+.+..|.--...+++.+.++    .    ..+.+|++|.....
T Consensus        67 ~aDvVIi~~~~~~~~g-~~---r~dl~~~n~~i~~~i~~~i~~~----~----p~~~vi~~tNP~~~  121 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG-ES---RLDLLEKNADIFRELVPQITRA----A----PDAVLLVTSNPVDL  121 (304)
T ss_dssp             TCSEEEECC----------------CHHHHHHHHHHHHHHHHHH----C----SSSEEEECSSSHHH
T ss_pred             CCCEEEEcCCCCCCCC-Cc---HHHHHHhHHHHHHHHHHHHHHh----C----CCeEEEEecCchHH
Confidence            6899999998643221 11   1233444444444444444443    1    25677777765543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.91  E-value=0.014  Score=53.50  Aligned_cols=43  Identities=16%  Similarity=0.091  Sum_probs=37.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      ++.+++++|+|+ |++|+++++.+...|++|+++++++...+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999996 8999999999999999999999987765543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.87  E-value=0.15  Score=45.40  Aligned_cols=121  Identities=16%  Similarity=0.120  Sum_probs=71.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhh----CCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKE----IPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|.|+|| |.+|..++..|+..|. .|++.+++++.++.....+...    ....++... .|.   +           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------
Confidence            47899998 9999999999999997 8999999988777555554432    112223321 222   1           


Q ss_pred             cCCCccEEEEccccCCCCcccCcc-cccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKD-NIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~-~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+...|++|.++|+...+.....| +-...+..|.    .+.+.+.+.+.+..    +.+.+|++|.....
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNP~~~  131 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNC----PNAFIIVVTNPVDV  131 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSHHH
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecCChHH
Confidence            123789999999964322111000 0112233332    34455555444431    35677777766544

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.87  E-value=0.02  Score=48.24  Aligned_cols=77  Identities=14%  Similarity=0.193  Sum_probs=53.1

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      +-.++++||.|||.||+ .+|...++.|++.|++|++++.+...  + .+.+..   ..++.++..++...+        
T Consensus        24 Pifl~L~gk~VLVVGgG-~va~~ka~~Ll~~GA~VtVvap~~~~--~-l~~l~~---~~~i~~i~~~~~~~d--------   88 (223)
T 3dfz_A           24 TVMLDLKGRSVLVVGGG-TIATRRIKGFLQEGAAITVVAPTVSA--E-INEWEA---KGQLRVKRKKVGEED--------   88 (223)
T ss_dssp             EEEECCTTCCEEEECCS-HHHHHHHHHHGGGCCCEEEECSSCCH--H-HHHHHH---TTSCEEECSCCCGGG--------
T ss_pred             ccEEEcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCCH--H-HHHHHH---cCCcEEEECCCCHhH--------
Confidence            34478999999999975 89999999999999999999875432  1 222222   335666655554321        


Q ss_pred             HHhcCCCccEEEEccc
Q 020927          102 FKSSGLPLNILINNAG  117 (319)
Q Consensus       102 i~~~~~~id~lv~nag  117 (319)
                          ....|++|.+.+
T Consensus        89 ----L~~adLVIaAT~  100 (223)
T 3dfz_A           89 ----LLNVFFIVVATN  100 (223)
T ss_dssp             ----SSSCSEEEECCC
T ss_pred             ----hCCCCEEEECCC
Confidence                235788887766

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.86  E-value=0.049  Score=46.85  Aligned_cols=87  Identities=17%  Similarity=0.249  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHH--------hhCCCCceEEEEcCCCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIV--------KEIPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~--------~~~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      .++++.|.|+ |.+|..+++.|++.|++ |.+++|+++..+...+.+.        ....+..+.++   ......+.++
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~---av~~~~~~~v   84 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV---SLKDSAFAEL   84 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE---CCCHHHHHHH
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE---ecCHHHHHHH
Confidence            3457899996 89999999999999997 8899999988776655421        00011122222   2234456777


Q ss_pred             HHHHHhcCCCccEEEEcccc
Q 020927           99 ASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~  118 (319)
                      ++++.....+=.++|++++.
T Consensus        85 ~~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           85 LQGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHHTTCCTTCEEEECCTT
T ss_pred             HHHHHhhcCCCcEEEECCCC
Confidence            77776543333467777654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.86  E-value=0.0096  Score=51.93  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=39.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      .++++++++|.|+ |++|+++++.|++.|++|++++|+.+++++..
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            4678999999996 79999999999999999999999987766543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.86  E-value=0.028  Score=49.53  Aligned_cols=80  Identities=16%  Similarity=0.137  Sum_probs=53.1

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .++|.|.||.|.+|.++++.|++.|++|++++|+++..  ..+.+    .+..+.++.+-..   .+.++++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~----~~aDvVilavp~~---~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL----ANADVVIVSVPIN---LTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH----TTCSEEEECSCGG---GHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh----cCCCEEEEeCCHH---HHHHHHHHHHhhcCC
Confidence            45799999999999999999999999999999976421  11111    1456666655443   366777777554322


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      =.+|+..++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            224555444

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.85  E-value=0.03  Score=50.99  Aligned_cols=47  Identities=13%  Similarity=0.036  Sum_probs=40.3

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      ....+.+++|+|.|+ |.+|..+++.+...|++|++++|+.+.++...
T Consensus       178 ~~~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          178 AAGTVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             SSCEECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             ccCCcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            334568899999998 79999999999999999999999988766553

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.028  Score=51.62  Aligned_cols=46  Identities=20%  Similarity=0.060  Sum_probs=39.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      ...+.+.+|+|.|+ |.+|..+++.+...|++|+++++++..++...
T Consensus       185 ~g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          185 AGTVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             TEEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            34568899999999 79999999999999999999999987766543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.81  E-value=0.02  Score=52.22  Aligned_cols=73  Identities=11%  Similarity=0.096  Sum_probs=52.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....          ..--.++..|..|.+.+.++++.  
T Consensus         7 ~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~----------~~ad~~~~~~~~d~~~l~~~~~~--   73 (377)
T 3orq_A            7 NKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR----------YVAHEFIQAKYDDEKALNQLGQK--   73 (377)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG----------GGSSEEEECCTTCHHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh----------hhCCEEEECCCCCHHHHHHHHHh--
Confidence            34568999999985 569999999999999999999886542110          00113566889998888777663  


Q ss_pred             hcCCCccEEEE
Q 020927          104 SSGLPLNILIN  114 (319)
Q Consensus       104 ~~~~~id~lv~  114 (319)
                           +|+++.
T Consensus        74 -----~dvi~~   79 (377)
T 3orq_A           74 -----CDVITY   79 (377)
T ss_dssp             -----CSEEEE
T ss_pred             -----CCccee
Confidence                 566643

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.80  E-value=0.2  Score=41.17  Aligned_cols=77  Identities=13%  Similarity=0.071  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+.+||-.|++.|.   ++..|++.+.+|+.++.+++.++.+.+.+.......++.++..|+.+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            57889999988653   3455556688999999999988877776655432337999999987621          1224


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      .+|+++.+.+
T Consensus       122 ~~D~v~~~~~  131 (204)
T 3njr_A          122 LPEAVFIGGG  131 (204)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCc
Confidence            6899997664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.77  E-value=0.054  Score=48.10  Aligned_cols=44  Identities=16%  Similarity=0.083  Sum_probs=37.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVK   70 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~   70 (319)
                      .+..++|.|.| .|.+|.++++.|.+.|+  +|++++|+++.++...
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            44457899998 79999999999999998  9999999998766543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.75  E-value=0.098  Score=47.34  Aligned_cols=43  Identities=19%  Similarity=0.214  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      +++++|.|.| .|-+|..+++.|++.|++|++++|++++.+.+.
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            3457888887 689999999999999999999999998776543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.75  E-value=0.024  Score=48.52  Aligned_cols=113  Identities=15%  Similarity=0.162  Sum_probs=70.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +|+|.|++|.+|+.+++.+.+. +..|+......+.++...    ..  +..   +.+|++.++.+.+.+..+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~--~~D---vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG--NTE---VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT--TCC---EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc--CCc---EEEEccChHHHHHHHHHHHHc--CC
Confidence            5899999999999999999876 788776543332233222    11  222   567999999998888877654  68


Q ss_pred             cEEEEccccCCCCcc----cCc--ccccchhhhhhhHHHHHHHHHHHHHhc
Q 020927          110 NILINNAGIMATPFM----LSK--DNIELQFATNHIGHFLLTNLLLETMGK  154 (319)
Q Consensus       110 d~lv~nag~~~~~~~----~~~--~~~~~~~~vn~~~~~~l~~~~~~~l~~  154 (319)
                      ++||...|......+    ...  ....-.+..|+-=-.+++..++....+
T Consensus        71 ~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~  121 (245)
T 1p9l_A           71 HAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAAR  121 (245)
T ss_dssp             EEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGG
T ss_pred             CEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHh
Confidence            899988884321000    000  022234455554445566666665543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.74  E-value=0.018  Score=49.77  Aligned_cols=47  Identities=28%  Similarity=0.308  Sum_probs=40.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~   73 (319)
                      .+++| +++|.|+ |++|+++++.|.+.|++|++++|+.++.+.+.+..
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            46788 9999997 77999999999999999999999988777665543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.72  E-value=0.0093  Score=53.47  Aligned_cols=72  Identities=17%  Similarity=0.099  Sum_probs=56.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+        ..+.++.+|.++++.++++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            567999996 8999999999999999 999999988765 321        2577899999999887654      1236


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|.+|...+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            788888765

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.72  E-value=0.01  Score=51.82  Aligned_cols=39  Identities=31%  Similarity=0.365  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~   62 (319)
                      ..+++||+++|.|+++-+|+.++..|+..|++|.++.|+
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            367899999999999999999999999999999999764

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.70  E-value=0.031  Score=46.48  Aligned_cols=78  Identities=10%  Similarity=0.181  Sum_probs=51.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ...+..+++.|.| .|.+|.++++.|++.|.+|++++|+++           ...+..+.++.+-   ...+.++++++.
T Consensus        14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l~   78 (209)
T 2raf_A           14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQYA   78 (209)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHTH
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHHH
Confidence            4567788999999 799999999999999999999999865           1124456665554   566777777765


Q ss_pred             hcCCCccEEEEccc
Q 020927          104 SSGLPLNILINNAG  117 (319)
Q Consensus       104 ~~~~~id~lv~nag  117 (319)
                      .... =.++|..+.
T Consensus        79 ~~~~-~~~vi~~~~   91 (209)
T 2raf_A           79 TQLK-GKIVVDITN   91 (209)
T ss_dssp             HHHT-TSEEEECCC
T ss_pred             HhcC-CCEEEEECC
Confidence            4332 235555543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.69  E-value=0.012  Score=51.41  Aligned_cols=87  Identities=10%  Similarity=0.177  Sum_probs=55.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CCEEE-EEeCCHHHH--HHHH-------------HHHHhhCCCCceEEEEcCC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GVHVV-MAVRNMAAC--REVK-------------KAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~~Vv-~~~r~~~~~--~~~~-------------~~~~~~~~~~~v~~~~~Dl   89 (319)
                      ++..+|+|+|++|.+|+.+++.+++. |.+|+ +++++.+..  ....             ..+.....+  + =+.+|+
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~--~-DvVIDf   79 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDD--F-DVFIDF   79 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTS--C-SEEEEC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcC--C-CEEEEc
Confidence            34458999999999999999998865 56766 555554220  0000             000000001  1 234589


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcccc
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~  118 (319)
                      +.++.....+....+.  ++++++-..|.
T Consensus        80 t~p~~~~~~~~~a~~~--G~~vVigTtG~  106 (273)
T 1dih_A           80 TRPEGTLNHLAFCRQH--GKGMVIGTTGF  106 (273)
T ss_dssp             SCHHHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             CChHHHHHHHHHHHhC--CCCEEEECCCC
Confidence            9999888888877665  67788878774

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.68  E-value=0.11  Score=45.89  Aligned_cols=117  Identities=15%  Similarity=0.117  Sum_probs=68.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhh----CCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKE----IPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|.|+|| |.+|..++..|+..|. +|++.++++++++.....+...    ....++... .|.   +           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---A-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---H-----------
Confidence            57999999 9999999999999996 8999999987776554444431    112223221 221   1           


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+...|++|.++|....+. .+.   ...+    .-...+.+.+.+.+.+..    ..+.|+++|.....
T Consensus        67 a~~~aD~Vi~a~g~p~~~g-~~r---~dl~----~~n~~i~~~i~~~i~~~~----p~a~vi~~tNPv~~  124 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPRKPG-MSR---EDLI----KVNADITRACISQAAPLS----PNAVIIMVNNPLDA  124 (309)
T ss_dssp             GGTTCSEEEECCCC------------CHHH----HHHHHHHHHHHHHHGGGC----TTCEEEECCSSHHH
T ss_pred             HHCCCCEEEEcCCCCCCCC-CCH---HHHH----HHHHHHHHHHHHHHHhhC----CCeEEEEcCCchHH
Confidence            1236899999999743221 111   1112    222345566666665542    35566676665543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.66  E-value=0.047  Score=50.61  Aligned_cols=42  Identities=24%  Similarity=0.301  Sum_probs=37.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAAC   66 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~   66 (319)
                      ...+.||+++|.|. |.||+++|+.+...|++|+++++++...
T Consensus       242 g~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a  283 (464)
T 3n58_A          242 DVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICA  283 (464)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            46789999999996 5699999999999999999999987653

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.66  E-value=0.011  Score=52.48  Aligned_cols=68  Identities=6%  Similarity=0.015  Sum_probs=46.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.++||+|| |++|...+..+...|++|+.++ ++++.+.+ +++     +.... +  |  +.   ++    +   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~v-~--~--d~---~~----v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR-----GVRHL-Y--R--EP---SQ----V---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH-----TEEEE-E--S--SG---GG----C---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc-----CCCEE-E--c--CH---HH----h---CC
Confidence            6899999999 9999999988888899999999 66655543 222     32222 2  3  21   11    1   45


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            89999999984

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.65  E-value=0.12  Score=46.22  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=69.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC----CCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI----PNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|.|+|| |.+|.+++..|+..|. +|++.+++++.++.....+....    ...++... .|+   +           
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   78 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---E-----------   78 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---H-----------
Confidence            57999998 9999999999999998 99999999887775443333221    12233321 232   1           


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .....|++|.++|+...+. .+..   ..+..|    ..+.+.+.+.+.+..    +.+.+|++|.....
T Consensus        79 al~~aD~VI~avg~p~k~g-~tr~---dl~~~n----~~i~~~i~~~i~~~~----p~a~viv~tNP~~~  136 (328)
T 2hjr_A           79 YLQNSDVVIITAGVPRKPN-MTRS---DLLTVN----AKIVGSVAENVGKYC----PNAFVICITNPLDA  136 (328)
T ss_dssp             GGTTCSEEEECCSCCCCTT-CCSG---GGHHHH----HHHHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             HHCCCCEEEEcCCCCCCCC-Cchh---hHHhhh----HHHHHHHHHHHHHHC----CCeEEEEecCchHH
Confidence            1236799999999643221 1111   122223    334455555554431    35577777765543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.60  E-value=0.0054  Score=56.62  Aligned_cols=48  Identities=27%  Similarity=0.371  Sum_probs=39.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEE-EEeC----------CHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVV-MAVR----------NMAACREVKKA   72 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv-~~~r----------~~~~~~~~~~~   72 (319)
                      ..+++||+++|+| .|.+|..+++.|++.|++|+ +.++          +.+.+.+..+.
T Consensus       213 g~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          213 GLDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            4579999999998 88999999999999999988 6666          66666555443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.58  E-value=0.11  Score=47.06  Aligned_cols=46  Identities=24%  Similarity=0.236  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      |....++|.|.|+ |.+|.+++..|++.|.+|.+++|+++..+...+
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~   70 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQA   70 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            4444567899986 899999999999999999999999887665544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.56  E-value=0.055  Score=48.18  Aligned_cols=120  Identities=18%  Similarity=0.100  Sum_probs=68.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCC-CceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPN-AKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +..+|.|+|| |.+|..++..|+..|.  +|+++++++++++.....+....+- ..+... .  .+           .+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~   70 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YS   70 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HH
Confidence            3457999998 9999999999999986  8999999987766555555433211 122211 1  11           11


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .+...|++|..+|....+. .+   -.+.+..|.--...+++.+.++    .    +++.||++|.....
T Consensus        71 a~~~aDvVii~~g~p~k~g-~~---r~dl~~~n~~i~~~i~~~i~~~----~----p~a~viv~tNPv~~  128 (318)
T 1y6j_A           71 DVKDCDVIVVTAGANRKPG-ET---RLDLAKKNVMIAKEVTQNIMKY----Y----NHGVILVVSNPVDI  128 (318)
T ss_dssp             GGTTCSEEEECCCC-------C---HHHHHHHHHHHHHHHHHHHHHH----C----CSCEEEECSSSHHH
T ss_pred             HhCCCCEEEEcCCCCCCCC-cC---HHHHHHhhHHHHHHHHHHHHHh----C----CCcEEEEecCcHHH
Confidence            2347899999999743221 11   1233455544444444444443    1    36688887776544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.55  E-value=0.068  Score=47.48  Aligned_cols=118  Identities=17%  Similarity=0.169  Sum_probs=72.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++.|+|+ |.+|.+++..|+..|.  .|++++++++.++.....+.+..+  ...+.....|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5889997 9999999999999986  899999998877755555544210  11222221121  1           123


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|.++|....+. .   .-.+.++.|.    .+++.+.+.+.+..    +++.++++|.....
T Consensus        68 ~~aDvVii~ag~~~kpG-~---~R~dl~~~N~----~i~~~i~~~i~~~~----p~a~vivvtNPvd~  123 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-M---SRDDLLAKNT----EIVGGVTEQFVEGS----PDSTIIVVANPLDV  123 (314)
T ss_dssp             TTCSEEEECCCC-----------CHHHHHHHH----HHHHHHHHHHHTTC----TTCEEEECCSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-C---CHHHHHHhhH----HHHHHHHHHHHHhC----CCcEEEecCCchhH
Confidence            37899999999743321 1   1223344443    45566666665542    46788988886644

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.53  E-value=0.054  Score=48.46  Aligned_cols=80  Identities=16%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..|+++||.|| |++|...+..+...|+. ++++++++++++.+. ++     +....+   |..+.+ ..+..+++.+ 
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~l-----Ga~~~i---~~~~~~-~~~~~~~~~~-  226 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SF-----GAMQTF---NSSEMS-APQMQSVLRE-  226 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCSEEE---ETTTSC-HHHHHHHHGG-
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-Hc-----CCeEEE---eCCCCC-HHHHHHhhcc-
Confidence            36899999987 89999999888889985 677888887755432 22     322222   333322 2233343332 


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      ....|+++.++|.
T Consensus       227 ~~g~d~v~d~~G~  239 (346)
T 4a2c_A          227 LRFNQLILETAGV  239 (346)
T ss_dssp             GCSSEEEEECSCS
T ss_pred             cCCcccccccccc
Confidence            3468999998883

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.50  E-value=0.24  Score=47.19  Aligned_cols=149  Identities=9%  Similarity=-0.099  Sum_probs=91.0

Q ss_pred             CCCCCEEEEeCCCC-chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH-HH
Q 020927           26 DGSGLTAIVTGASS-GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE-FK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~-gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~-i~  103 (319)
                      ...|.+.++....+ +++.+++..|.++|.+|+.+.-...                         .+.+.+.+++.+ +.
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~-------------------------~~~~~~~~~l~~~~~  101 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL-------------------------GDRQRLAATLGEALA  101 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT-------------------------CCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC-------------------------CCHHHHHHHHHhhhh
Confidence            45677777776554 3899999999999998877754321                         055555555553 22


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhh-hhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFA-TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~-vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ...+.++.++|..+.-.....     -..... ..+.+.+.++|++...-        ...++++++..+.... +.   
T Consensus       102 ~~~~~~~~v~~l~~~~~~~~~-----~~~~~~~~g~~~~l~l~qal~~~~--------~~~~l~~vT~ga~~~~-~~---  164 (525)
T 3qp9_A          102 AAGGAVDGVLSLLAWDESAHP-----GHPAPFTRGTGATLTLVQALEDAG--------VAAPLWCVTHGAVSVG-RA---  164 (525)
T ss_dssp             HTTSCCSEEEECGGGCCCBCT-----TSCTTCBHHHHHHHHHHHHHHHTT--------CCSCEEEEEESCCCCB-TT---
T ss_pred             cccCCCCeEEEcccCCCCccc-----cccccccchHHHHHHHHHHHHhcC--------CCCcEEEEECCCEeCC-CC---
Confidence            456678999998875322110     011122 45667777888775421        2356777765432211 00   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHP  230 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~P  230 (319)
                                  ...-...++++.+|.+.++.|+-..-  ++...+.+
T Consensus       165 ------------~~~~~p~~a~l~Gl~r~~~~E~p~~~--~~~vDl~~  198 (525)
T 3qp9_A          165 ------------DHVTSPAQAMVWGMGRVAALEHPERW--GGLIDLPS  198 (525)
T ss_dssp             ------------BCCSCHHHHHHHHHHHHHHHHSTTTE--EEEEEECS
T ss_pred             ------------CCCCCHHHHHHHHHHHHHHHhCCCce--EEEEEcCC
Confidence                        11235688999999999999986533  55555543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.47  E-value=0.052  Score=50.14  Aligned_cols=43  Identities=16%  Similarity=0.157  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      ...+.||+++|.|. |.||+++|+.|...|++|+++++++....
T Consensus       215 ~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~  257 (435)
T 3gvp_A          215 DMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICAL  257 (435)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence            45689999999997 56999999999999999999999986543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.47  E-value=0.16  Score=44.96  Aligned_cols=119  Identities=16%  Similarity=0.169  Sum_probs=74.2

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++|.|+|| |.+|..++..|+..+  ..|++.++++++++.....+....+ ...+.... |  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------h
Confidence            36899998 999999999999988  4799999999888876666654321 11222222 2  2211           2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      ...|++|..+|....+. .+.   ...+..|.-    +++.+.+.+.+.    ...+.||++|......
T Consensus        66 ~~aD~Vii~ag~~~~~g-~~r---~dl~~~n~~----i~~~i~~~i~~~----~p~a~iiv~tNPv~~~  122 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG-ETR---LQLLDRNAQ----VFAQVVPRVLEA----APEAVLLVATNPVDVM  122 (310)
T ss_dssp             TTEEEEEECCCCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHH----CTTCEEEECSSSHHHH
T ss_pred             CCCCEEEECCCCCCCCC-cCH---HHHHHhhHH----HHHHHHHHHHHH----CCCcEEEEecCchHHH
Confidence            37899999999743321 111   123333333    444444544443    2477888888766543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.47  E-value=0.041  Score=49.26  Aligned_cols=79  Identities=23%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..|.++||.|| |++|...+..+... |.+|+++++++++.+...+ +     +....   +|..+.+..+++. ++.. 
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~-----Ga~~~---i~~~~~~~~~~v~-~~t~-  229 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-I-----GADVT---INSGDVNPVDEIK-KITG-  229 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-T-----TCSEE---EEC-CCCHHHHHH-HHTT-
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-c-----CCeEE---EeCCCCCHHHHhh-hhcC-
Confidence            35899999987 67777677776665 5799999999887553322 1     32222   2444444333322 2211 


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      ...+|.++.+++
T Consensus       230 g~g~d~~~~~~~  241 (348)
T 4eez_A          230 GLGVQSAIVCAV  241 (348)
T ss_dssp             SSCEEEEEECCS
T ss_pred             CCCceEEEEecc
Confidence            125888888877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-40
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-38
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	5e-38
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-34
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-32
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-32
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-31
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	9e-31
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-30
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-29
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-28
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-28
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-28
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-28
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-27
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-26
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-25
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-25
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-25
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-25
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	7e-25
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-24
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-24
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-24
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-24
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-23
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-23
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-23
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-23
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-22
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-22
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-22
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-22
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-22
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-21
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	9e-21
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-20
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-20
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-20
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-20
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-19
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-19
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	8e-19
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-18
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-18
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-18
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-18
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-18
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	4e-18
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	5e-18
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-17
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-16
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-16
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-15
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-14
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-13
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-10
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-09
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-09
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-07
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	3e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-07
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	8e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 5e-40
 Identities = 67/291 (23%), Positives = 107/291 (36%), Gaps = 54/291 (18%)

Query: 32  AIVTGASSGIGTETARVLA-LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           A+VTG + GIG    R L  L    VV+  R++   +   + +  E      +  +LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLTNLL 148
            L S+R      +     L++L+NNAGI              E+   TN  G   +   L
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEG--------------------------IR 182
           L  +         +GR+VNVSS     +                                
Sbjct: 124 LPLI-------KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGV--DITANSVHPGAITTNLFRN 240
             +   Q      SAYG +K+   + +   AR+L E      I  N+  PG + T++   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 241 ISFFSGLVGLLGKYVIKNVEQGAATTCYVALHP-HVKGLTGSYFADSNVAQ 290
            +              K+ E+GA T  Y+AL P   +G  G + ++  V Q
Sbjct: 237 KAT-------------KSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 274

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  133 bits (336), Expect = 4e-38
 Identities = 64/264 (24%), Positives = 97/264 (36%), Gaps = 30/264 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           S  + +VTGA+ GIG    + L       H++   R++    E     +K I +++V  +
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVL 56

Query: 86  ELDLSSLASVRKFASEFKS--SGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIG 140
            L ++   S+  F S+         L++LINNAG++    T    ++  I  Q   N   
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
             LLT  LL  +   A  S + G  ++VS                    S      AY  
Sbjct: 117 VVLLTQKLLPLLKNAA--SKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRM 174

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE 260
           SK A  +    LA  LK+D   +   +  PG + TNL              GK     VE
Sbjct: 175 SKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLG-------------GKNAALTVE 219

Query: 261 QGAATTCYVALHPHVKGLTGSYFA 284
           Q  A               G +F 
Sbjct: 220 QSTAELISSFNKLD-NSHNGRFFM 242

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 5e-38
 Identities = 51/214 (23%), Positives = 81/214 (37%), Gaps = 18/214 (8%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGAS GIG   AR L  +G+ VV   R +    E+            +     DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           +   +    S  +S    ++I INNAG+    T    S    +  F  N +   + T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            ++M +    +  +G I+N++S       P              +    Y  +K A    
Sbjct: 132 YQSMKER---NVDDGHIININSMSGHRVLP-------------LSVTHFYSATKYAVTAL 175

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           T  L + L+E    I A  + PG + T     + 
Sbjct: 176 TEGLRQELREAQTHIRATCISPGVVETQFAFKLH 209

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 3e-34
 Identities = 56/225 (24%), Positives = 78/225 (34%), Gaps = 25/225 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   ++TGA  GIG  TA   A     +V+   N     E           AKV    +
Sbjct: 6   TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVV 63

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNA--GIMATPFMLSKDNIELQFATNHIGHFLLT 145
           D S+   +   A + K+    ++IL+NNA     +  F      IE  F  N + HF  T
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M K     +  G IV V+S     S P                  AY  SK A 
Sbjct: 124 KAFLPAMTK-----NNHGHIVTVASAAGHVSVP---------------FLLAYCSSKFAA 163

Query: 206 VLHTSELARRLKEDGVD-ITANSVHPGAITTNLFRNISFFSGLVG 249
           V     L   L    +  +    + P  + T   +N S   G   
Sbjct: 164 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL 208

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 2e-32
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 29/219 (13%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           ++G    A+VTGA+ GIG   A  L L+G  V +   N+ A  + K A+ ++    K   
Sbjct: 1   VNGK--VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 58

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLL 144
           ++ D++    +R    +       L+IL+NNAG+       ++ N E     N +     
Sbjct: 59  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISG 112

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T L L+ M K        G I+N+SS               +       +   Y  SK  
Sbjct: 113 TYLGLDYMSKQNGGEG--GIIINMSS---------------LAGLMPVAQQPVYCASKHG 155

Query: 205 NVLHT--SELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V  T  + LA  L   G  +  N++ PG + T +  +I
Sbjct: 156 IVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESI 192

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  118 bits (298), Expect = 2e-32
 Identities = 50/217 (23%), Positives = 82/217 (37%), Gaps = 27/217 (12%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           +D +    I   A  GIG +T+R L  R +   + +  +     + +      P   +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITF 59

Query: 85  MELDLS-SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFL 143
              D++  +A  +K   +       ++ILIN AGI+          IE   A N  G   
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVN 113

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
            T  +L+   K  R+    G I N+ S               +   +  ++   Y  SK 
Sbjct: 114 TTTAILDFWDK--RKGGPGGIIANICS---------------VTGFNAIHQVPVYSASKA 156

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           A V  T+ LA+     G  +TA S++PG   T L   
Sbjct: 157 AVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHT 191

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  116 bits (291), Expect = 2e-31
 Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 29/221 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           +   AI+TG+S+GIG  TA + A  G  V +  R+     E ++ I+   +    V ++ 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIM------ATPFMLSKDNIELQFATNHIG 140
            D+++ A   +  S        L+IL+NNAG         T    S ++ +     N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
              LT   +  +      SS +G IVN+SS                        F  Y  
Sbjct: 124 VIALTKKAVPHL------SSTKGEIVNISSIASGL--------------HATPDFPYYSI 163

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +K A   +T   A  L + G  I  NS+ PG + T     +
Sbjct: 164 AKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAM 202

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 9e-31
 Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 32/218 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTG   GIG    R     G  VV+  ++ +  R +++ +           +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILC 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNA---GIMATPFMLSKDNIELQFATNHIGHFLL 144
           D++    V+   SE       L+ ++NNA        P   S          N +G + L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           T L L  + K       +G ++N+SS               +    G  +   Y  +K A
Sbjct: 119 TKLALPYLRK------SQGNVINISS---------------LVGAIGQAQAVPYVATKGA 157

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
               T  LA      G  +  N + PG I T L+  ++
Sbjct: 158 VTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELA 193

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  114 bits (286), Expect = 1e-30
 Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 28/214 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG +SG+G E  ++L   G  V  +  N AA +++   +       +   +  
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRH 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D+SS A      +  +     LN+L+NNAGI+          ++       N    F+  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M +T       G I+N++S               ++      +++ Y  SK A 
Sbjct: 120 QQGIAAMKETG------GSIINMAS---------------VSSWLPIEQYAGYSASKAAV 158

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
              T   A   ++ G  I  NS+HP  I T + +
Sbjct: 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  109 bits (274), Expect = 6e-29
 Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 13/218 (5%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           I     T IVTG + GIG    R +A  G +V +  R+ A   EV + + KE    K +A
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKA 63

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLL 144
            + D+S+   V K   +  +   P++ LI NA    +    + +     FA  +  +   
Sbjct: 64  YQCDVSNTDIVTKTIQQIDADLGPISGLIANA--GVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                  + K   +  ++G IV  SS   Q      +         G      Y  SK A
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN--------GSLTQVFYNSSKAA 173

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
                  LA      G  I  N++ PG + T+   ++ 
Sbjct: 174 CSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMD 209

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  107 bits (269), Expect = 3e-28
 Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 28/216 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               A++TG ++GIG   A   A+ G  + +A    A      +A ++ +   +V  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA---PEAEAAIRNL-GRRVLTVKC 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIGHFLLT 145
           D+S    V  F  +  S+    +IL+NNAGI    PF  L+ +  +  F  N    FL+ 
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +  M +     +  GRI+N++S  +                     ++ Y  +K AN
Sbjct: 120 KAFVPGMKR-----NGWGRIINLTSTTYWLKIE---------------AYTHYISTKAAN 159

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +  T  LA  L +DG  IT N++ P  + T      
Sbjct: 160 IGFTRALASDLGKDG--ITVNAIAPSLVRTATTEAS 193

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (266), Expect = 6e-28
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)

Query: 25  IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
           ++ SGL A+VTGA  GIG +T + L   G  VV   R  +    + K          ++ 
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEP 54

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHF 142
           + +DL    +  K          P+++L+NNA +  M     ++K+  +  F+ N    F
Sbjct: 55  VCVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            ++ ++   M          G IVNVSS     ++P                   Y  +K
Sbjct: 111 QVSQMVARDM----INRGVPGSIVNVSSMVAHVTFPN---------------LITYSSTK 151

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            A  + T  +A  L      I  NSV+P  + T++ + +S
Sbjct: 152 GAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVS 189

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  106 bits (267), Expect = 6e-28
 Identities = 53/221 (23%), Positives = 73/221 (33%), Gaps = 32/221 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTG + GIG   A+  A  G  V +            K + + I  A  Q    
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-----KEVAEAIGGAFFQV--- 55

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           DL       +F  E   +   +++L+NNA I    +   +           N      L+
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            L    M K        G IVNV+S               +         +AY  SK   
Sbjct: 116 ALAAREMRK-----VGGGAIVNVAS---------------VQGLFAEQENAAYNASKGGL 155

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG 246
           V  T  LA  L      I  N+V PGAI T         S 
Sbjct: 156 VNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSP 194

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  106 bits (266), Expect = 7e-28
 Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 24/216 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AI+TG + GIG   A      G  V++  R+     +  K++       ++Q  + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQH 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           D S      K     + +  P++ L+NNAGI     +   +        A N  G F  T
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            L ++ M    +       I+N+SS       P                  AY  SK A 
Sbjct: 122 RLGIQRM----KNKGLGASIINMSSIEGFVGDP---------------SLGAYNASKGAV 162

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            + +   A        D+  N+VHPG I T L  ++
Sbjct: 163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 5e-27
 Identities = 50/215 (23%), Positives = 79/215 (36%), Gaps = 24/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   IVTGAS GIG E A  LA  G HVV+  R+    ++V    + E+  A    +  
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAG 71

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
            +  +    +F ++       L++LI N         F     ++      N + + +LT
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLT 131

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  + +        G IV VSS   + +YP                 +AY  SK A 
Sbjct: 132 VAALPMLKQ------SNGSIVVVSSLAGKVAYP---------------MVAAYSASKFAL 170

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
               S + +      V+++      G I T     
Sbjct: 171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 205

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  103 bits (257), Expect = 2e-26
 Identities = 52/225 (23%), Positives = 76/225 (33%), Gaps = 27/225 (12%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK 81
           +Q       T +VTG + GIG       A  G  +    RN     E      K+    +
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQ 58

Query: 82  VQAMELDLSSLASVRKFASEFKSS-GLPLNILINNAGIM-ATPFM-LSKDNIELQFATNH 138
           V     D S      K      S  G  L+ILINN G + + P +  + ++     +TN 
Sbjct: 59  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 118

Query: 139 IGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY 198
              + L+ L    +  +       G I+ +SS                      +  S Y
Sbjct: 119 ESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVV---------------SASVGSIY 158

Query: 199 GQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
             +K A       LA     DG  I AN+V P  I T L   +  
Sbjct: 159 SATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYD 201

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  102 bits (256), Expect = 5e-26
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 30/215 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-----MAACREVKKAIVKEIPNAKV 82
            G   +VTGA  G+G   A   A RG  VV+         +         +V+EI   + 
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI-RRRG 64

Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIELQFATNHIG 140
                +  S+ +  K       +   +++++NNAGI+    F  +S ++ ++    +  G
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
            F +T    + M K        GRI+  +S                +   G    + Y  
Sbjct: 125 SFQVTRAAWDHMKK-----QNYGRIIMTAS---------------ASGIYGNFGQANYSA 164

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITT 235
           +KL  +   + L    +++   I  N++ P A + 
Sbjct: 165 AKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSR 197

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  101 bits (252), Expect = 1e-25
 Identities = 46/219 (21%), Positives = 79/219 (36%), Gaps = 27/219 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           SG + I+TG+S+GIG   A + A  G  V +  RN     E K+ I+K  +P  K+ A+ 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML----SKDNIELQFATNHIGHF 142
            D++  +      +   +    ++IL+NNAG              +  +  F  N     
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            +T                            +           +     ++ +  Y  +K
Sbjct: 123 EMTQ--------------------KTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK 162

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            A   +T   A  L + G  +  NSV PGA+ T     +
Sbjct: 163 AALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAM 199

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  100 bits (251), Expect = 1e-25
 Identities = 53/217 (24%), Positives = 80/217 (36%), Gaps = 27/217 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     +       +    KV+A   
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 64

Query: 88  DLSSLASVRKFASEFKSS-GLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLL 144
           DLSS +  ++  +   +     LNIL+NNAGI+        + ++  L  + N    + L
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           + L    +  + R +                     +    ++        + YG +K A
Sbjct: 125 SVLAHPFLKASERGNV--------------------VFISSVSGALAVPYEAVYGATKGA 164

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
               T  LA    +D   I  N V PG I T+L    
Sbjct: 165 MDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMT 199

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  100 bits (251), Expect = 1e-25
 Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 29/221 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE-IPNAKVQAME 86
           S  T I+TG+S+GIG  TA + A  G +V +  R+     E ++ I+K  +   +V ++ 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAG------IMATPFMLSKDNIELQFATNHIG 140
            D+++     +  +        +++L+NNAG         T      D        N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
              +T  +   +  +     K   +   S      + P                F  Y  
Sbjct: 124 VIEMTKKVKPHLVAS-----KGEIVNVSSIVAGPQAQP---------------DFLYYAI 163

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +K A   +T   A  L + G  I  NSV PG + T     +
Sbjct: 164 AKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAM 202

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 99.7 bits (248), Expect = 3e-25
 Identities = 51/218 (23%), Positives = 76/218 (34%), Gaps = 29/218 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG T I+TG + G+G E AR     G  VV+A           + +         +   L
Sbjct: 4   SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHL 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D++     ++  +  +     ++ L+NNAGI         S +        N  G F+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             ++  M       +  G IVN+SS                    G    S+YG SK   
Sbjct: 119 KTVIPAMKD-----AGGGSIVNISS---------------AAGLMGLALTSSYGASKWGV 158

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
              +   A  L  D   I  NSVHPG   T +      
Sbjct: 159 RGLSKLAAVELGTD--RIRVNSVHPGMTYTPMTAETGI 194

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (248), Expect = 7e-25
 Identities = 42/215 (19%), Positives = 73/215 (33%), Gaps = 28/215 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP---NAKVQA 84
            G  AIVTG ++GIG    + L   G +VV+A R +   +     +   +P    A+V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHF 142
           ++ ++ +   V         +   +N L+NN G   ++    +S         TN  G F
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            +   +                            +   I    +  ++G+      G ++
Sbjct: 131 YMCKAVY---------------------SSWMKEHGGSIVNIIVPTKAGFPLAVHSGAAR 169

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNL 237
                 T  LA      G  I  N V PG I +  
Sbjct: 170 AGVYNLTKSLALEWACSG--IRINCVAPGVIYSQT 202

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 20/214 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG S G+G   A+ LA  G  VV+A RN+    E  + + ++    +  A   
Sbjct: 4   RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRC 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D+S+   V+K     K     L+ ++N AGI       +++    +F      +   T  
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI--NRRHPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +        RES     I   S    + + P                 SAY  SK     
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMP---------------NISAYAASKGGVAS 165

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T  LA+     G  I  N + PG   T +   +
Sbjct: 166 LTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAV 197

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 30/214 (14%), Positives = 58/214 (27%), Gaps = 33/214 (15%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           TAIVT      G  +A  L+  G  V     +     E++               +L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPM 53

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIM--ATPFM-LSKDNIELQFATNHIGHFLLTNL 147
           S     +      S+   +++L++N        P    + ++         I  F L N 
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +   M                     +      I          +   S Y  ++     
Sbjct: 114 VASQM--------------------KKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 153

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             + L++ L E    I   ++ P  + +      
Sbjct: 154 LANALSKELGEYN--IPVFAIGPNYLHSEDSPYF 185

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 3e-24
 Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 33/216 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA  GIG  T + L   G  VV   R  A       ++V+E P  +   + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPGIE--PVCV 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFM--LSKDNIELQFATNHIGHFLLT 145
           DL    +  +          P+++L+NNA +        ++K+  +  F  N      ++
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
            ++   +          G IVNVSS+  Q +                   S Y  +K A 
Sbjct: 116 QIVARGLIA----RGVPGAIVNVSSQCSQRAVT---------------NHSVYCSTKGAL 156

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            + T  +A  L      I  N+V+P  + T++ +  
Sbjct: 157 DMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQAT 190

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.4 bits (239), Expect = 5e-24
 Identities = 46/226 (20%), Positives = 79/226 (34%), Gaps = 34/226 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLA---LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQA 84
                ++TGAS G G   A  LA     G  ++++ R+ +  R++K+ +  + P+ KV  
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  MELDLSSLASVRKFASEFKSS----GLPLNILINNAGIMATPFM-----LSKDNIELQFA 135
              DL + A V++  S  +      GL   +LINNA  +               +   +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 195
            N      LT+  L     +         +VN+SS      Y                 +
Sbjct: 125 LNLTSMLCLTSGTLNAFQDSPG---LSKTVVNISSLCALQPYK---------------GW 166

Query: 196 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
             Y   K A  +    LA         +   S  PG +  ++ +  
Sbjct: 167 GLYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPLDNDMQQLA 208

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 95.2 bits (236), Expect = 2e-23
 Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 19/214 (8%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +    ++TG  SG+G  TA  LA  G  + +   +       K A+++  P+A+V     
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D+S  A V  + +        ++   NNAG +      ++     +F      +     L
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAG-IEGKQNPTESFTAAEFDKVVSINLRGVFL 121

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            LE + K  RE    G +VN +S               +    G    S Y  +K   V 
Sbjct: 122 GLEKVLKIMREQGS-GMVVNTAS---------------VGGIRGIGNQSGYAAAKHGVVG 165

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            T   A      G  I  N++ PGAI T +  N 
Sbjct: 166 LTRNSAVEYGRYG--IRINAIAPGAIWTPMVENS 197

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 94.3 bits (234), Expect = 2e-23
 Identities = 49/217 (22%), Positives = 79/217 (36%), Gaps = 32/217 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                ++TGA+ GIG  T  + A  G  +V         RE  +A+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAG--IMATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  ASV +  +E  +    L+ +++ AG       + +  ++ EL    N  G FL+ 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
               E M          G IV  +SR +                 G    + Y  S    
Sbjct: 117 KAASEAM-----REKNPGSIVLTASRVYL----------------GNLGQANYAASMAGV 155

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           V  T  LA  L   G  I  N++ PG I T +   + 
Sbjct: 156 VGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVP 190

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 94.0 bits (233), Expect = 4e-23
 Identities = 51/215 (23%), Positives = 81/215 (37%), Gaps = 25/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  AI+TGA +GIG E A   A  G  VV++  N  A   V   I +     +  A   
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFMLSKDNIELQFATNHIGHFLLTN 146
           D++S   +   A    S    ++IL+NNAG     PF +   +    +  N    F L+ 
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
           L+   M                     +      +    +  ++     ++Y  SK A  
Sbjct: 128 LVAPEM--------------------EKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167

Query: 207 LHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                +A  L E    I  N + PGAI T+  +++
Sbjct: 168 HLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSV 200

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 92.5 bits (229), Expect = 9e-23
 Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 33/220 (15%)

Query: 32  AIVTGASSGIGTETARVLALRGVH-------VVMAVRNMAACREVKKAIVKEIPNAKVQA 84
            ++TGA  GIG   A   A    H       +V++ R  A   ++      E   A    
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 85  MELDLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHF 142
           +  D+S +A VR+  +        ++ L+NNAG+        L++++ +    TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
            LT  L   M +        G I  ++S     ++                  S Y  SK
Sbjct: 122 FLTQALFALMER-----QHSGHIFFITSVAATKAFR---------------HSSIYCMSK 161

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
                    +    ++    +    V PGA+ T ++  + 
Sbjct: 162 FGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVD 199

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 91.8 bits (227), Expect = 3e-22
 Identities = 53/213 (24%), Positives = 75/213 (35%), Gaps = 20/213 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTG++SGIG   A  LA +G  +V+     AA  E  +A +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           DLS   +VR            ++IL+NNAGI  T  +      +           +    
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
                    +     GRI+N                   +        SAY  +K   V 
Sbjct: 123 AAALPHMKKQ---GFGRIIN---------------IASAHGLVASANKSAYVAAKHGVVG 164

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            T   A      G  ITAN++ PG + T L   
Sbjct: 165 FTKVTALETAGQG--ITANAICPGWVRTPLVEK 195

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 91.2 bits (226), Expect = 3e-22
 Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 22/212 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGA  GIG E A++LA    HV+   R   +C  V   I       +      D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
               + +  ++  +    ++IL+NNAGI      L   N E +     +   L +   + 
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWED---VLRTNLNSLFYIT 126

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 210
                   +++ GRI+N+SS               I   +G    + Y  SK   +  T 
Sbjct: 127 QPISKRMINNRYGRIINISS---------------IVGLTGNVGQANYSSSKAGVIGFTK 171

Query: 211 ELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            LA+ L      IT N++ PG I++++   IS
Sbjct: 172 SLAKELASRN--ITVNAIAPGFISSDMTDKIS 201

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 91.3 bits (226), Expect = 4e-22
 Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 28/218 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
               AI+TG + GIG  TA++    G  VV+A       ++V   I        +  +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHC 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM----ATPFMLSKDNIELQFATNHIGHFL 143
           D++    VR       +    L+I+  N G++     +      ++ +     N  G FL
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 144 LTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKL 203
           +               +K+G IV  +S                   +G      Y  +K 
Sbjct: 122 VAKHAAR-----VMIPAKKGSIVFTASISSF--------------TAGEGVSHVYTATKH 162

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           A +  T+ L   L E G  I  N V P  + + L  ++
Sbjct: 163 AVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDV 198

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 90.1 bits (223), Expect = 8e-22
 Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 29/216 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G  A+V+G + G+G    R +   G  VV         + +   +         + + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHL 59

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFML--SKDNIELQFATNHIGHFLLT 145
           D++  A  +       ++   L++L+NNAGI+    +   +    +     N  G FL  
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +++ M +     +  G I+N+SS                           Y  +K A 
Sbjct: 120 RAVVKPMKE-----AGRGSIINISSIEGLAG---------------TVACHGYTATKFAV 159

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
              T   A  L   G  I  NS+HPG + T +   +
Sbjct: 160 RGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWV 193

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 90.5 bits (224), Expect = 9e-22
 Identities = 43/223 (19%), Positives = 70/223 (31%), Gaps = 36/223 (16%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   ++TG +SG+G          G  V +  ++     E++           V  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVG 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI-------MATPFMLSKDNIELQFATNHIG 140
           D+ SL   ++ AS   +    ++ LI NAGI       +  P        +  F  N  G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 141 HFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQ 200
           +       L  +       S+   I  +S+                           Y  
Sbjct: 119 YIHAVKACLPALVA-----SRGNVIFTISNAGFY----------------PNGGGPLYTA 157

Query: 201 SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
           +K A V    ELA  L      +  N V  G I ++L    S 
Sbjct: 158 AKHAIVGLVRELAFEL---APYVRVNGVGSGGINSDLRGPSSL 197

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 89.5 bits (221), Expect = 2e-21
 Identities = 48/216 (22%), Positives = 76/216 (35%), Gaps = 27/216 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           +G   +VTGA   IG  TA  LA  G  + +   N  A  + + ++ ++    + ++   
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 61

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNA---GIMATPFMLSKDNIELQFATNHIGHFLL 144
           D++S  +V             ++ L NNA   G  A       D+       N  G F +
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
              +   M          GRIVN +S               +    G    +AYG SK A
Sbjct: 122 LKAVSRQMIT-----QNYGRIVNTAS---------------MAGVKGPPNMAAYGTSKGA 161

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            +  T   A  L      I  N++ PG +       
Sbjct: 162 IIALTETAALDLAPYN--IRVNAISPGYMGPGFMWE 195

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 8e-21
 Identities = 36/214 (16%), Positives = 66/214 (30%), Gaps = 26/214 (12%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA--IVKEI--PNAKVQAMEL 87
            ++TG SSGIG   A  LA            +   +   +     + +  P   ++ ++L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D+    SV           + + +     G++     L +D +      N +G   +   
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
            L  M +        GR++   S               +    G      Y  SK A   
Sbjct: 125 FLPDMKR-----RGSGRVLVTGS---------------VGGLMGLPFNDVYCASKFALEG 164

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
               LA  L   G  +  + +  G + T     +
Sbjct: 165 LCESLAVLLLPFG--VHLSLIECGPVHTAFMEKV 196

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 87.5 bits (216), Expect = 9e-21
 Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 20/213 (9%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
              A+VTGA+SGIG E AR L   G+ V +  R     R   K + +     +      D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCD 59

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLL 148
           + S+  +    +       P+++L+NNAG        ++   EL           +  + 
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVT 118

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            + +          GRIVN++S   +                     + Y  SK   V  
Sbjct: 119 KQVLKAGGMLERGTGRIVNIASTGGKQGVV---------------HAAPYSASKHGVVGF 163

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           T  L   L   G  IT N+V PG + T +  ++
Sbjct: 164 TKALGLELARTG--ITVNAVCPGFVETPMAASV 194

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 1e-20
 Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 20/213 (9%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A +TG  +G+G     +L+  G   V+A R M   +   + I  +  N KV A++ 
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQC 82

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D+     V+   SE        NI+INNA         ++      + T        T  
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNA--AGNFISPTERLSPNAWKTITDIVLNGTAF 140

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
           +   +GK   ++ K    +++++               I  ++G         +K     
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITT---------------IYAETGSGFVVPSASAKAGVEA 185

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            +  LA    + G  +  N + PG I T    +
Sbjct: 186 MSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFS 216

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 86.7 bits (214), Expect = 2e-20
 Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 28/219 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAME 86
           +G  A+ TGA  GIG   A  L  RG  VV+    +  A  EV   + K    A+  A++
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQ 62

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLL 144
            D+S  + V     +  S    L+ +++N+G+        ++++  +  F  N  G F +
Sbjct: 63  ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               L+   +                R    S    +        +G    + Y  SK A
Sbjct: 123 AQQGLKHCRR--------------GGRIILTSSIAAVM-------TGIPNHALYAGSKAA 161

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF 243
                   A      G  +T N + PG + T++F   S+
Sbjct: 162 VEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSW 198

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 85.9 bits (212), Expect = 4e-20
 Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 24/215 (11%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   ++TG+S+G+G   A   A     VV+  R+           +K++   +  A++ 
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKG 64

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  + V             L+++INNAG+    +   +S  +      TN  G FL +
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              +    K   E+  +G ++N+SS   +  +P                F  Y  SK   
Sbjct: 125 REAI----KYFVENDIKGTVINMSSVHEKIPWP---------------LFVHYAASKGGM 165

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            L T  LA      G  I  N++ PGAI T +   
Sbjct: 166 KLMTETLALEYAPKG--IRVNNIGPGAINTPINAE 198

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 84.8 bits (209), Expect = 7e-20
 Identities = 59/259 (22%), Positives = 95/259 (36%), Gaps = 31/259 (11%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            +VTGAS GIG   A  L   G  V++   R+  A  EV K I       +      D+S
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVS 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHI--GHFLLTNLL 148
             A V         +   +++++NNAGI     ++     +     +    G FL T   
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
            + M K      ++GRI+N++S               +    G    + Y  +K   +  
Sbjct: 122 TKIMMK-----KRKGRIINIAS---------------VVGLIGNIGQANYAAAKAGVIGF 161

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIK---NVEQGAAT 265
           +   AR        I  N V PG I +++   +        +LG   +      E  A  
Sbjct: 162 SKTAAREGASRN--INVNVVCPGFIASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGL 218

Query: 266 TCYVALHPHVKGLTGSYFA 284
             ++AL P    +TG  F 
Sbjct: 219 VEFLALSPAASYITGQAFT 237

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 82.8 bits (204), Expect = 3e-19
 Identities = 48/216 (22%), Positives = 72/216 (33%), Gaps = 32/216 (14%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           SG T +VTGA+SGIG     + A  G  +V   R      E   A+      A+  A+  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D+S   +V    +E       L+ + + AG+   A  + L  +  E     N  G FL+ 
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
               E +                           G+              + Y   KL  
Sbjct: 119 RKAGEVL--------------EEGGSLVLTGSVAGLG---------AFGLAHYAAGKLGV 155

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           V     LA  L   G  +  N + PG I T +   +
Sbjct: 156 VGLARTLALELARKG--VRVNVLLPGLIQTPMTAGL 189

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 82.5 bits (203), Expect = 5e-19
 Identities = 46/213 (21%), Positives = 70/213 (32%), Gaps = 25/213 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A+VTGA  GIG   A  L   G  V +A  N A  + V   I +        A+++D+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQF--ATNHIGHFLLTNLL 148
               V     + + +    ++++NNAG+  +  + S     +      N  G        
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 149 LETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLH 208
           +E   K                  +                        Y  SK A    
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELA-------------------VYSSSKFAVRGL 161

Query: 209 TSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           T   AR L   G  IT N   PG + T ++  I
Sbjct: 162 TQTAARDLAPLG--ITVNGYCPGIVKTPMWAEI 192

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 82.2 bits (202), Expect = 8e-19
 Identities = 45/216 (20%), Positives = 78/216 (36%), Gaps = 28/216 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA++TG++ GIG   A      G  V +A  N+ A R     I          A+ L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIAL 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM--ATPFMLSKDNIELQFATNHIGHFLLT 145
           D++  AS+ +  +E       ++IL+NNA +   A    +++++ +  FA N  G   + 
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             +   M                          + I       + G      Y  +K A 
Sbjct: 119 QAVARAMIA-------------------GGRGGKIINMASQAGRRGEALVGVYCATKAAV 159

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
           +  T      L   G  I  N++ PG +    +  +
Sbjct: 160 ISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDGV 193

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 82.1 bits (202), Expect = 1e-18
 Identities = 48/219 (21%), Positives = 78/219 (35%), Gaps = 30/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAME 86
            G  A+VTGA  GIG E A  L  RG  V++   N   +  EV  AI K    +    ++
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVK 74

Query: 87  LDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQ--FATNHIGHFLL 144
            ++  +  + +   E       L+I+ +N+G+++   +      E    F  N  G F +
Sbjct: 75  ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFV 134

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAY-GQSKL 203
                                      +H       I    I  Q+      A    SK 
Sbjct: 135 AREA----------------------YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG 172

Query: 204 ANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
           A       +A  + +    IT N V PG I T+++  + 
Sbjct: 173 AIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVC 209

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 29/219 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G  A+VTGAS GIG   A  LA RG  V+    +    + +   +      A  + + L
Sbjct: 3   EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLML 57

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQF--ATNHIGHFLLT 145
           +++  AS+     + ++    ++IL+NNAGI     ++   + E      TN    F L+
Sbjct: 58  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
             ++  M K      + GRI+ + S               +    G    + Y  +K   
Sbjct: 118 KAVMRAMMK-----KRHGRIITIGS---------------VVGTMGNGGQANYAAAKAGL 157

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF 244
           +  +  LAR +   G  IT N V PG I T++ R +S  
Sbjct: 158 IGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSDD 194

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 80.9 bits (198), Expect = 2e-18
 Identities = 45/216 (20%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 31  TAIVTGASSGIGTETARVL---ALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           + ++TG + G+G    + L        H+    RN    +E+ + + K   N  +  ++L
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDL 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIM---ATPFMLSKDNIELQFATNHIGHFLL 144
                        E  +    LN+L NNAGI    A    +    +     TN +   +L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
               L  + K A+ +  +   V  ++  +  S    I+       +      AY  SK A
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG------NTDGGMYAYRTSKSA 176

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
               T  L+  L      I   S+HPG + T++  +
Sbjct: 177 LNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGS 210

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 80.5 bits (198), Expect = 2e-18
 Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 33/215 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
              + +VTG + GIG   A+ LA  G  V +  R   A + +               +E+
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEV 52

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           D++   +V +  +  +    P+ +L++NAG+ A  F++     + +   N          
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV- 111

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
                   + + +K GR++ + S               ++   G    + Y  SK   + 
Sbjct: 112 --AQRASRSMQRNKFGRMIFIGS---------------VSGLWGIGNQANYAASKAGVIG 154

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
               +AR L +    +TAN V PG I T++ R + 
Sbjct: 155 MARSIARELSKAN--VTANVVAPGYIDTDMTRALD 187

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 80.5 bits (198), Expect = 3e-18
 Identities = 53/216 (24%), Positives = 68/216 (31%), Gaps = 27/216 (12%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G TA+VTG S GIG      LA  G  V    RN     E  +   ++     V+    
Sbjct: 5   KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 62

Query: 88  DLSSLASVRKFASEFKSS-GLPLNILINNAGIMA-TPFM-LSKDNIELQFATNHIGHFLL 144
           DL S     K            LNIL+NNAG++        ++ +  +   TN    +  
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY-- 120

Query: 145 TNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                                               I    I   S     S Y  SK A
Sbjct: 121 ------------------HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGA 162

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
               T  LA    +D  +I  NSV PG I T L   
Sbjct: 163 INQMTKSLACEWAKD--NIRVNSVAPGVILTPLVET 196

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.7 bits (196), Expect = 4e-18
 Identities = 48/215 (22%), Positives = 75/215 (34%), Gaps = 34/215 (15%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
            G   I+T A+ GIG   A   A  G  V+    N +  +E++K          +Q   L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGI--MATPFMLSKDNIELQFATNHIGHFLLT 145
           D     + +K   +F +    L++L N AG     T     + + +     N    +L+ 
Sbjct: 58  D----VTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
              L  M        K G I+N+SS                    G      Y  +K A 
Sbjct: 114 KAFLPKMLA-----QKSGNIINMSSVASSV--------------KGVVNRCVYSTTKAAV 154

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
           +  T  +A    + G  I  N V PG + T   + 
Sbjct: 155 IGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQE 187

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 79.5 bits (195), Expect = 5e-18
 Identities = 45/217 (20%), Positives = 73/217 (33%), Gaps = 37/217 (17%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           +A+VTG +SG+G   A  L  RG  VV+                       +  +E D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVT 48

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFM-----LSKDNIELQFATNHIGHFLLT 145
               VR+  +  +       ++      +A   +        ++       N +G F + 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 146 NLLLETMGK-TARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
            L    M +       + G IVN +S               +    G    +AY  SK  
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTAS---------------VAAFEGQIGQAAYAASKGG 153

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
            V  T   AR L   G  I   +V PG   T L + +
Sbjct: 154 VVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGL 188

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.4 bits (187), Expect = 6e-17
 Identities = 28/214 (13%), Positives = 56/214 (26%), Gaps = 35/214 (16%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
               +V G    +G+   +    R   V                      +  V+  +  
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------ASVIVKMTDSF 52

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSK---DNIELQFATNHIGHFLLT 145
                 V     +       ++ ++  AG  A     SK    N +L +  +     + +
Sbjct: 53  TEQADQVTAEVGKLLGDQ-KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
           +L  + +        + G +    +                    G      YG +K A 
Sbjct: 112 HLATKHL-------KEGGLLTLAGA---------------KAALDGTPGMIGYGMAKGAV 149

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFR 239
                 LA +         A +V P  + T + R
Sbjct: 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR 183

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 75.7 bits (185), Expect = 2e-16
 Identities = 35/213 (16%), Positives = 61/213 (28%), Gaps = 16/213 (7%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
            A++TG +  IG   A  L  +G  VV+  R+     +   A +           + DLS
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 91  SLASVRKFASEFKSSGL----PLNILINNAGIM----ATPFMLSKDNIELQFATNHIGHF 142
             +S+     +            ++L+NNA         P   +    + +     +   
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 143 LLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSK 202
             +N +       A    +            +      +             F  Y  +K
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEG------GAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 176

Query: 203 LANVLHTSELARRLKEDGVDITANSVHPGAITT 235
            A    T   A  L      I  N+V PG    
Sbjct: 177 HALGGLTRAAALELAPRH--IRVNAVAPGLSLL 207

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 2e-16
 Identities = 44/218 (20%), Positives = 73/218 (33%), Gaps = 21/218 (9%)

Query: 29  GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
           GL A++TG +SG+G  TA  L  +G   V+     +      K +      A        
Sbjct: 5   GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEK 64

Query: 89  LSSLASVRKFASEFKSSGLPLNILINNAG---IMATPFMLSKDNIELQFATNHIGHFLLT 145
               A         +         I  A     +      + ++ +     N +G F + 
Sbjct: 65  DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 124

Query: 146 NLLLETMGKTARE-SSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
            L+   MG+   +   + G I+N +S               +    G    +AY  SK  
Sbjct: 125 RLVAGEMGQNEPDQGGQRGVIINTAS---------------VAAFEGQVGQAAYSASKGG 169

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS 242
            V  T  +AR L   G  I   ++ PG   T L  ++ 
Sbjct: 170 IVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLP 205

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.1 bits (173), Expect = 5e-15
 Identities = 30/213 (14%), Positives = 56/213 (26%), Gaps = 29/213 (13%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
           S    IV G    +G+         G  V+    +  A  +    I+ +      +  + 
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS--ANDQADSNILVDGNKNWTEQEQS 58

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
            L   AS  + +         ++ +   AG  A     SKD ++          +     
Sbjct: 59  ILEQTASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVL 207
                          G +    +                           YG +K A   
Sbjct: 111 AKLAT----THLKPGGLLQLTGA---------------AAAMGPTPSMIGYGMAKAAVHH 151

Query: 208 HTSELARRLKEDGVDITANSVHPGAITTNLFRN 240
            TS LA +      +    ++ P  + T + R 
Sbjct: 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 184

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 68.5 bits (167), Expect = 3e-14
 Identities = 33/216 (15%), Positives = 59/216 (27%), Gaps = 41/216 (18%)

Query: 28  SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMEL 87
                +V  AS GIG   A VL+  G  V +  RN    +      V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 50

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNA--GIMATPFMLSKDNIELQFATNHIGHFLLT 145
                  +RK           ++IL+ NA          L+ ++ +    +  +      
Sbjct: 51  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI--- 102

Query: 146 NLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
                              + N      +  +   +     +  S          +++A 
Sbjct: 103 -----------------KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL 145

Query: 206 VLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 241
                 L+  +   G  IT N V PG   T   + +
Sbjct: 146 TGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKEL 179

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.2 bits (163), Expect = 2e-13
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 33/214 (15%)

Query: 25  IDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV 82
           +D SG  A+V G ++   +G   A  L   G  V ++ +      E +K           
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK---LAEALGGA 60

Query: 83  QAMELDLSSLASVRKFASEFKSSGLPLNILINNA------GIMATPFMLSKDNIELQFAT 136
                D++    +    +  K +   L+ L++         +        + +  L    
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 137 NHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFS 196
           +      +       + +        G IV ++                   +    +++
Sbjct: 121 SAYSLVAVARRAEPLLREG-------GGIVTLTY---------------YASEKVVPKYN 158

Query: 197 AYGQSKLANVLHTSELARRLKEDGVDITANSVHP 230
               +K A       LA  L   GV + A S  P
Sbjct: 159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGP 192

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 64.9 bits (157), Expect = 8e-13
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 24/211 (11%)

Query: 28  SGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAM 85
           SG   +VTG +S   I    A+ +   G  +    +N      V++             +
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVL 60

Query: 86  ELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLT 145
           + D++  AS+    +E        +  +++    A    L  D +             ++
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSI-GFAPGDQLDGDYVNAVTREGFKIAHDIS 119

Query: 146 NLLLETMGKTARESSKEG-RIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
           +     M K  R     G  ++ +S    + + P                ++  G +K +
Sbjct: 120 SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP---------------NYNVMGLAKAS 164

Query: 205 NVLHTSELARRLKEDGVDITANSVHPGAITT 235
              +   +A  +  +G  +  N++  G I T
Sbjct: 165 LEANVRYMANAMGPEG--VRVNAISAGPIRT 193

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 57.6 bits (138), Expect = 3e-10
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 20/89 (22%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
            +++G ++GIG  T +VL   G  +V                     +A+V A   DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIR----------------DAEVIA---DLST 44

Query: 92  LASVRK-FASEFKSSGLPLNILINNAGIM 119
               ++  A         ++ L+  AG+ 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 55.8 bits (133), Expect = 1e-09
 Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 19/202 (9%)

Query: 32  AIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPN----------- 79
           A+VTGA+  +G   A  L   G  V +   R+ A    +   +    PN           
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 80  -----AKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIM-ATPFM-LSKDNIEL 132
                         ++      +  +   +     ++L+NNA     TP +   +D  E 
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 133 QFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGY 192
                        +L                  V  +  +H+ +    I           
Sbjct: 125 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 184

Query: 193 NRFSAYGQSKLANVLHTSELAR 214
             ++ Y  +K A    T   A 
Sbjct: 185 LGYTIYTMAKGALEGLTRSAAL 206

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 55.5 bits (133), Expect = 2e-09
 Identities = 27/219 (12%), Positives = 66/219 (30%), Gaps = 21/219 (9%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           ++TG +  IG+   R +       V+ +  +       +++     + +      D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETM 152
           A + +   +++      + +++ A         S         TN +G + L  +  +  
Sbjct: 63  AEITRIFEQYQ-----PDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYW 115

Query: 153 GKTARESSKEGRIVNVSS------RRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANV 206
                +     R  ++S+        H       +      + + Y   S Y  SK ++ 
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 207 LHTSELARRLKEDGVDITA----NSVHPGAITTNLFRNI 241
                  R     G+        N+  P      L   +
Sbjct: 176 HLVRAWRR---TYGLPTIVTNCSNNYGPYHFPEKLIPLV 211

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAI 73
          T +VTG + G+G + AR LA RG  H+++  R+        + +
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV 54

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.1 bits (113), Expect = 3e-07
 Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV 82
           A++ G    +G   A  LA  G  +V+  R             +   +A +
Sbjct: 3  VALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI 53

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 48.6 bits (114), Expect = 3e-07
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 25 IDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKV 82
          ID  G  A + G +   G G   A+ LA  G  +++     A           +   ++V
Sbjct: 4  IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

Query: 83 QA 84
            
Sbjct: 64 LP 65

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 28 SGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKK 71
           G   ++ G ++   I    A+    +G  +     N +  + V+ 
Sbjct: 4  KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 16/149 (10%)

Query: 22  TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAK 81
             G    G  A+V   +  +G  +A +LA  G  VV+  R +   +    ++ K      
Sbjct: 16  AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV 75

Query: 82  VQAMELDLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGH 141
             A   D +S A   K            + +     I     +L +   + + +   +  
Sbjct: 76  TAAETADDASRAEAVK----------GAHFVFTAGAIGLE--LLPQAAWQNESSIEIVAD 123

Query: 142 FLLTNLLLETMGKTARESSKEGRIVNVSS 170
           +         +G    +++ +G+      
Sbjct: 124 YNAQP----PLGIGGIDATDKGKEYGGKR 148

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 45.5 bits (106), Expect = 3e-06
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%)

Query: 28 SGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN 79
           G   +V+G    S I    ARV   +G  +V+   +      + + I   +P 
Sbjct: 5  DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL---RLIQRITDRLPA 55

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 3e-05
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 20/178 (11%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP---NAKVQAMEL 87
            A++TG +   G+  A  L  +G  V    R  ++    +   + + P   N K      
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 88  DLSSLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNL 147
           DLS  +++ +   E +                 +   +S ++ E     + +G    T  
Sbjct: 63  DLSDTSNLTRILREVQ-------PDEVYNLGAMSHVAVSFESPEYTADVDAMG----TLR 111

Query: 148 LLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLAN 205
           LLE +     E  K+ R    S+    +   + I      + + +   S Y  +KL  
Sbjct: 112 LLEAIRFLGLE--KKTRFYQAST-SELYGLVQEIPQK---ETTPFYPRSPYAVAKLYA 163

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 42.6 bits (99), Expect = 3e-05
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 20/206 (9%)

Query: 33  IVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSL 92
           +VTG S  IG+ T   L   G H V+ + N+   +     +++ +       +E D+ + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 93  ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETM 152
           A + +   +       ++ +I+ AG+ A     S       +  N  G      L+    
Sbjct: 63  ALMTEILHDHA-----IDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTL---RLI---- 108

Query: 153 GKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSEL 212
                 + +   + N         Y +  +   +         S YG+SKL      ++L
Sbjct: 109 -----SAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDL 163

Query: 213 ARRLKEDGVDITANSVHPGAITTNLF 238
            +   +  + +       GA  +   
Sbjct: 164 QKAQPDWSIALLRYFNPVGAHPSGDM 189

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELD 88
          G   +VTGA+  + +     L   G  V    R+ +    ++K    + P     A+  D
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 89 LS 90
          + 
Sbjct: 71 ML 72

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.9 bits (94), Expect = 1e-04
 Identities = 8/56 (14%), Positives = 15/56 (26%)

Query: 34 VTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL 89
          + G +  IG          G    +  R        K  ++        + +E  L
Sbjct: 8  IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 17/174 (9%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
             +VTG +  IG+ T   L   G   V    N++       A ++ +    +   E+DL 
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
               + K   E+K     ++ +I+ AG+ A             +  N +G  +L  L+ +
Sbjct: 62  DRKGLEKVFKEYK-----IDSVIHFAGLKAVGESTQIPLR--YYHNNILGTVVLLELMQQ 114

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLA 204
                        + V  SS               I ++      + YG +K A
Sbjct: 115 YNVS---------KFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA 159

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.5 bits (90), Expect = 3e-04
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 32 AIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME 86
            + G   ++G G   A+ L+ R V ++  +        +K     +  N  +   +
Sbjct: 5  CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.8 bits (89), Expect = 6e-04
 Identities = 32/183 (17%), Positives = 54/183 (29%), Gaps = 14/183 (7%)

Query: 33  IVTGASSGIGTETARVLALRGVHV-VMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS 91
           IVTG +  IG+     +      V V  +  +       KA ++ I   +V+ +  D++ 
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL--TYAGNKANLEAILGDRVELVVGDIAD 63

Query: 92  LASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLET 151
              V K         L             +    S ++      TN IG    T L    
Sbjct: 64  AELVDK---------LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGT--YTLLEAAR 112

Query: 152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSE 211
                        +      R           ++   ++ YN  S Y  +K A+ L    
Sbjct: 113 KYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKA 172

Query: 212 LAR 214
             R
Sbjct: 173 WVR 175

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.5 bits (88), Expect = 8e-04
 Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 5/69 (7%)

Query: 31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
          T  V GA+   G    RV A  G HV   V ++           +      V   +  L 
Sbjct: 5  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLL 59

Query: 91 SLASVRKFA 99
          +   +    
Sbjct: 60 NNVPLMDTL 68

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA-IVKEIPNAKVQAM 85
          GS    ++ GA+  IG   A+     G    + VR   A    +KA +++    +    +
Sbjct: 1  GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 86 ELDL 89
             +
Sbjct: 61 HGSI 64

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.004
 Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 21/191 (10%)

Query: 31  TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS 90
           +A+VTG +   G   A++L  +G  V   V   ++  + +  + +      +Q  + D++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS--DTRWRLRELGIEGDIQYEDGDMA 59

Query: 91  SLASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLE 150
              SV++   +                   +    S +        + +G   L      
Sbjct: 60  DACSVQRAVIKA-------QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLE---- 108

Query: 151 TMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 210
                 R+ S E R    S+          I+ +R ++ + +   S YG +KL     T 
Sbjct: 109 ----AIRQFSPETRFYQAST----SEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160

Query: 211 ELARRLKEDGV 221
                      
Sbjct: 161 NYRESFGLHAS 171

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.74
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.73
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.65
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.63
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.62
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.62
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.61
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.61
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.59
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.57
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.54
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.53
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.52
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.28
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.26
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.26
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.22
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.02
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.93
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.92
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.21
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.18
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.01
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.98
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.97
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.89
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.88
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.87
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.8
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.79
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.77
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.64
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.57
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.55
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.54
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.53
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.52
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.52
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.51
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.44
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.42
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.4
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.35
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.33
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.27
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.17
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.09
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.07
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.04
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.03
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.99
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.98
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.97
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.96
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.91
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.91
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.88
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.83
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.83
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.82
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.81
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.81
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.78
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.76
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.75
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.74
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.72
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.69
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.6
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.53
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.52
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.49
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.49
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.46
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.41
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.41
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.38
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.32
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.32
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.3
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.29
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.27
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.16
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.14
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.12
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.03
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.91
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.67
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.57
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.48
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.34
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.2
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.19
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.03
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.92
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.61
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.57
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.56
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.48
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.47
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	94.39
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.31
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.28
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.24
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.15
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.13
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.1
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.9
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.9
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.87
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.86
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.8
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.6
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.57
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.37
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.29
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.23
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.22
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.21
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.97
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.7
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.64
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.6
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.48
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.39
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.1
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.1
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.09
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.09
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.05
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.03
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.0
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.82
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.61
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.49
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.43
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.38
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.35
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.21
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.03
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.88
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.73
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.72
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.7
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.61
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.53
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	90.35
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.21
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.04
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.92
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.66
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	89.63
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.56
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.55
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.5
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.45
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.36
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.31
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	89.3
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	89.2
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.16
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.07
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.06
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.93
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	88.84
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.73
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	88.54
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	88.44
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.28
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.26
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	88.22
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	88.15
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.13
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	88.12
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.01
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.9
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.88
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	87.71
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	87.68
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	87.12
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.04
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	86.98
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.69
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.12
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	85.99
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.68
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.68
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.64
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.5
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.48
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.6
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.43
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.33
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.08
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	83.99
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.87
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.78
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	83.66
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.63
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.63
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	83.51
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	83.51
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	83.45
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	83.34
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	83.24
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.23
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	82.96
d2h00a1	250	Methyltransferase 10 domain containing protein MET	82.8
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.8
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	82.78
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	82.66
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.21
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.04
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.42
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	81.42
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	81.3
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.29

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-50  Score=354.62  Aligned_cols=242  Identities=24%  Similarity=0.306  Sum_probs=218.8

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.  +.++.++++|++++++++++++++
T Consensus         5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_           5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999999999999999876  568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC-CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT-PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .+++|++|+||||||+... +.+.+.++|++++++|+.+++++++.++|+|.++     +.++||++||.++..+.|+  
T Consensus        83 ~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Ii~isS~~~~~~~~~--  155 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-----GGGVILTITSMAAENKNIN--  155 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTCCCTT--
T ss_pred             HHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-----cccccccccccchhccccc--
Confidence            9999999999999998655 4467889999999999999999999999999886     4789999999999986554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~  258 (319)
                                   +..|++||+|+.+|+++||.|++++|  ||||+|+||+++|++....   .....+.+..|..++.+
T Consensus       156 -------------~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~  220 (255)
T d1fmca_         156 -------------MTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQ  220 (255)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBC
T ss_pred             -------------cccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcC
Confidence                         78999999999999999999999999  9999999999999987654   33445566677888899


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+|++++||+ |+.++++||+.|. |+|..
T Consensus       221 pedvA~~v~fL~-S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         221 PQDIANAALFLC-SPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHHh-CchhcCCcCCEEEECcCcc
Confidence            999999999999 7999999999888 66653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.3e-50  Score=350.94  Aligned_cols=241  Identities=25%  Similarity=0.338  Sum_probs=212.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+++.++++.++++..  +.++.++.+|++++++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++|++|+||||||+...  ..+.+.++|++++++|+.+++.++++++|+|+++     +.|+||++||.++..+.|+  
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~~~~~--  155 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-----RYGRIINISSIVGLTGNVG--  155 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT--
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-----CCeEEEEECCHHhcCCCCC--
Confidence            999999999999998655  3467789999999999999999999999999885     4799999999999986554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~  259 (319)
                                   ...|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|++....  .....+....|..++.+|
T Consensus       156 -------------~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~p  220 (251)
T d2c07a1         156 -------------QANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTP  220 (251)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCH
T ss_pred             -------------CHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCH
Confidence                         68999999999999999999999999  9999999999999998765  233445555778888999


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +|+|++++||+ |+.+.++||+.|. |+|..
T Consensus       221 edvA~~v~fL~-S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         221 EEVANLACFLS-SDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHh-CchhCCCcCcEEEECCCcC
Confidence            99999999999 7999999999888 66643

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.8e-50  Score=352.56  Aligned_cols=241  Identities=22%  Similarity=0.229  Sum_probs=215.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++....++.++.++++|++++++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999988887889999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +|++|+||||||+..+   ..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||++||..+..+.|+   
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~---  152 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-----GSGMVVNTASVGGIRGIGN---  152 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSBCSS---
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-----cCCCCcccccHhhccCCCC---
Confidence            9999999999997643   3367889999999999999999999999999875     5899999999999986554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----------hhHHHHHHHHh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----------SFFSGLVGLLG  252 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~  252 (319)
                                  ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|....          ...+.+....|
T Consensus       153 ------------~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p  218 (258)
T d1iy8a_         153 ------------QSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP  218 (258)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC
Confidence                        78999999999999999999999999  9999999999999986543          11223344456


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|+|+|+.++||+ |+.++++||+.|. |+|..
T Consensus       219 l~R~~~p~dvA~~v~fL~-S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         219 SKRYGEAPEIAAVVAFLL-SDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             TCSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHh-CchhcCCcCceEEcCcchh
Confidence            778889999999999999 7999999999888 55553

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.8e-50  Score=349.52  Aligned_cols=235  Identities=24%  Similarity=0.354  Sum_probs=211.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++.++.+|++++++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            689999999999999999999999999999999999999999888777     456889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.+++.++|.++|+|+++     +.|+||++||.++..+.|+    
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~~~~~----  146 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-----RHGRIITIGSVVGTMGNGG----  146 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHHCCTT----
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-----CCCEeeeecchhhcCCCCC----
Confidence            9999999999998655  3467889999999999999999999999999875     4799999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCCHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~  261 (319)
                                 +..|++||+|+++|+++|+.|++++|  ||||+|+||+++|++....  .....+....|..++.+|+|
T Consensus       147 -----------~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~ped  213 (243)
T d1q7ba_         147 -----------QANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQE  213 (243)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHH
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHH
Confidence                       68999999999999999999999999  9999999999999998765  22334455567788889999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+.++||+ |+.++++||+.|. |+|.
T Consensus       214 vA~~v~fL~-S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         214 IANAVAFLA-SDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHh-CchhcCCcCCeEEECCCe
Confidence            999999999 7999999999888 5554

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-49  Score=348.14  Aligned_cols=240  Identities=24%  Similarity=0.293  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.. +.++.++++|++++++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999988887665 56799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc-CCCCCC
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF-SYPEGI  181 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~-~~p~~~  181 (319)
                      ++|++|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|+|+++     +.|+||+++|..+.. +.|   
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~i~S~~~~~~~~~---  151 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-----DNPSIINIGSLTVEEVTMP---  151 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-----SSCEEEEECCGGGTCCCSS---
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----ccccccccccchhccccCc---
Confidence            99999999999998544  4467889999999999999999999999999875     478999999977644 333   


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                  .+..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....    .....+.+..|..++.
T Consensus       152 ------------~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~  217 (251)
T d1vl8a_         152 ------------NISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTG  217 (251)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCB
T ss_pred             ------------cccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCC
Confidence                        367899999999999999999999999  9999999999999997654    2334455667788889


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       218 ~pedvA~~v~fL~-S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         218 VPEDLKGVAVFLA-SEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             CGGGGHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHh-CchhCCCcCcEEEeCcCe
Confidence            9999999999999 7999999999888 5554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.3e-49  Score=347.78  Aligned_cols=242  Identities=26%  Similarity=0.285  Sum_probs=215.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         2 g~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d2ae2a_           2 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTV   79 (259)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999999998776  678899999999999999999999


Q ss_pred             HhcCC-CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSGL-PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~~-~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .++++ ++|+||||||+...  ..+.+.++|++++++|+.+++++++.++|+|+++     +.|+||+++|..+..+.|+
T Consensus        80 ~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~  154 (259)
T d2ae2a_          80 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-----ERGNVVFISSVSGALAVPY  154 (259)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----SSEEEEEECCGGGTSCCTT
T ss_pred             HHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-----ccccccccccccccccccc
Confidence            88876 79999999998654  3467889999999999999999999999999875     5789999999999886554


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhHHHHHHHHh
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFFSGLVGLLG  252 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~  252 (319)
                                     ...|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|++.+..       .....+....|
T Consensus       155 ---------------~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~p  217 (259)
T d2ae2a_         155 ---------------EAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA  217 (259)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST
T ss_pred             ---------------ccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCC
Confidence                           68999999999999999999999999  9999999999999986543       12233445567


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|+|+|+.++||+ |+.++++||+.|. |+|..
T Consensus       218 l~R~g~pedvA~~v~fL~-S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         218 LRRMGEPKELAAMVAFLC-FPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             TCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHh-CchhCCCcCcEEEECCCeE
Confidence            788899999999999999 7999999999888 66654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.9e-49  Score=346.73  Aligned_cols=237  Identities=21%  Similarity=0.302  Sum_probs=210.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++     +.++.++++|++++++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999999988888776     66899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++    ++.|+||++||.++..+.|+   
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~----~~~g~Iv~isS~~~~~~~~~---  148 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG----GRGGKIINMASQAGRRGEAL---  148 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCTT---
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh----ccCCccccccchhhcccccc---
Confidence            99999999999998654  4467889999999999999999999999987654    24789999999999986554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLVG  249 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~  249 (319)
                                  +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....             .....+..
T Consensus       149 ------------~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (256)
T d1k2wa_         149 ------------VGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGA  214 (256)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred             ------------ccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHh
Confidence                        78999999999999999999999999  9999999999999986543             12233445


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                      .+|.+++.+|+|+|+.++||+ |+.++++||+.|..+|.
T Consensus       215 ~~PlgR~~~p~evA~~v~fL~-S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         215 AVPFGRMGRAEDLTGMAIFLA-TPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             HSTTSSCBCHHHHHHHHHHTT-SGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-CchhCCccCceEEECcc
Confidence            567888899999999999999 79999999998885554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-49  Score=347.78  Aligned_cols=242  Identities=23%  Similarity=0.211  Sum_probs=192.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ...+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999999999998776  568999999999999999999999


Q ss_pred             HhcC-CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          103 KSSG-LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       103 ~~~~-~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      .+++ |++|+||||||+...  ..+.+.++|++.+++|+.+++.++|.++|+|+++     +.|+||++||..+..+.|.
T Consensus        80 ~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~  154 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-----GCGNIIFMSSIAGVVSASV  154 (259)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SSCEEEEEC----------
T ss_pred             HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-----ccccccccccccccccccc
Confidence            9987 689999999998655  4467889999999999999999999999999875     4799999999999886553


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhc
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVI  256 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~  256 (319)
                                     ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....   .....+....|..++
T Consensus       155 ---------------~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~  217 (259)
T d1xq1a_         155 ---------------GSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRF  217 (259)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC-------------------------
T ss_pred             ---------------cccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCC
Confidence                           67899999999999999999999999  9999999999999998765   223344556778888


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCcccccCCccc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFADSNVA  289 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~~  289 (319)
                      .+|+|+|++++||+ |+.++++||+.|..+|..
T Consensus       218 ~~pedvA~~v~fL~-S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         218 GEPEEVSSLVAFLC-MPAASYITGQTICVDGGL  249 (259)
T ss_dssp             CCGGGGHHHHHHHT-SGGGTTCCSCEEECCCCE
T ss_pred             cCHHHHHHHHHHHh-CchhcCCcCcEEEeCCCE
Confidence            99999999999999 799999999998844443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=5.2e-49  Score=346.00  Aligned_cols=238  Identities=28%  Similarity=0.267  Sum_probs=206.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.... +.++.++++|++++++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999996 566777777776654 568999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|+++     +.|+||+++|.++..+.|+    
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~----  151 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-----GFGRIINIASAHGLVASAN----  151 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-----CCceEeecccccceeccCC----
Confidence            9999999999998655  3467889999999999999999999999999985     4789999999999987554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--------------hHHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--------------FFSGLVG  249 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--------------~~~~~~~  249 (319)
                                 +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....              ..+.+.+
T Consensus       152 -----------~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T d1x1ta1         152 -----------KSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE  218 (260)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHH
T ss_pred             -----------cchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHh
Confidence                       68999999999999999999999999  99999999999999876541              1122445


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ..|..++.+|+|+|++++||+ |+.++++||+.|. |+|.
T Consensus       219 ~~Pl~R~g~pediA~~v~fL~-S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         219 KQPSLQFVTPEQLGGTAVFLA-SDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-ChhhCCCcCCEEEECcch
Confidence            667788899999999999999 7999999999888 5564

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.4e-49  Score=345.12  Aligned_cols=246  Identities=24%  Similarity=0.289  Sum_probs=214.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM-AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.++++..  +.++.++++|++++++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999974 5677888888765  6689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++|+||+||||||+..+  ..+.+.++|++.+++|+.+++++++.++|+|.++.    ..++||++||.++..+.|+  
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~----~g~~Iv~isS~~~~~~~~~--  154 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEND----IKGTVINMSSVHEKIPWPL--  154 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCCEEEEECCGGGTSCCTT--
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccc----ccccccccccchhcccCcc--
Confidence            999999999999998655  44678899999999999999999999999998752    3456999999999886554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                   +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....    .....+....|..++.
T Consensus       155 -------------~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~  219 (261)
T d1geea_         155 -------------FVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIG  219 (261)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCB
T ss_pred             -------------ccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCC
Confidence                         68999999999999999999999999  9999999999999987654    2223344456778889


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChh
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQ  294 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~  294 (319)
                      +|+|+|++++||+ |+.++++||+.|. |+|...++..
T Consensus       220 ~pediA~~v~fL~-S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         220 EPEEIAAVAAWLA-SSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             CHHHHHHHHHHHh-CchhcCCcCCeEEECCCeeCCCCC
Confidence            9999999999999 7999999999888 6676665443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7.8e-49  Score=340.97  Aligned_cols=234  Identities=21%  Similarity=0.225  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++.++++|++++++++++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888877766     45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +++++|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|.|+++     +.|+||++||..+..+.|+   
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~---  148 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-----GRGSIINISSIEGLAGTVA---  148 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT---
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-----CcceEEecccccccccccc---
Confidence            99999999999998654  4467889999999999999999999999999885     4789999999999886554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                  +..|++||+++.+|+++|+.|++++|  ||||+|+||+++|++.......   ....+..++.+|+|+
T Consensus       149 ------------~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~---~~~~pl~R~~~p~di  211 (244)
T d1nffa_         149 ------------CHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVPED---IFQTALGRAAEPVEV  211 (244)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSCTT---CSCCSSSSCBCHHHH
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhhhHH---HHhccccCCCCHHHH
Confidence                        78999999999999999999999999  9999999999999997654211   223466778899999


Q ss_pred             HHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          263 AATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       263 a~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+.++||+ ++.+.++||+.|. |+|..
T Consensus       212 A~~v~fL~-s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         212 SNLVVYLA-SDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHh-ChhhCCCcCCEEEECCCee
Confidence            99999999 7999999999888 55553

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=9.6e-49  Score=344.16  Aligned_cols=237  Identities=21%  Similarity=0.235  Sum_probs=212.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++...  +.++.++.+|++++++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999998765  668999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +|++|+||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++     +.|+||++||.++..+.|+   
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~II~isS~~~~~~~~~---  151 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-----NYGRIVNTASMAGVKGPPN---  151 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCHHHHSCCTT---
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-----cCCCCCeeechhhccCCcc---
Confidence            9999999999997643   4467889999999999999999999999999875     4899999999999987554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------------hhH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------------SFF  244 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------------~~~  244 (319)
                                  +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....                  ...
T Consensus       152 ------------~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T d1zema1         152 ------------MAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVA  217 (260)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHH
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHH
Confidence                        78999999999999999999999999  9999999999999975332                  122


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                      +.+...+|..++.+|+|+|+.++||+ |+.++++||+.|..+|
T Consensus       218 ~~~~~~~Pl~R~g~pedvA~~v~fL~-S~~s~~itG~~i~VDG  259 (260)
T d1zema1         218 QQMIGSVPMRRYGDINEIPGVVAFLL-GDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             HHHHHTSTTSSCBCGGGSHHHHHHHH-SGGGTTCCSCEEEESC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHh-CchhcCccCCeEEeCC
Confidence            33445567888899999999999999 7999999999888544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=3e-49  Score=345.62  Aligned_cols=240  Identities=24%  Similarity=0.216  Sum_probs=210.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998888776655     567999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|+++     +.|+||++||.++..+.|+    
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-----~~G~II~isS~~~~~~~~~----  147 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-----GGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT----
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-----CCCeecccccchhcccccc----
Confidence            9999999999998654  3467889999999999999999999999999875     4799999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcC-CHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIK-NVE  260 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~  260 (319)
                                 ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....  ..+...+..+..++. .|+
T Consensus       148 -----------~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~Pe  214 (254)
T d1hdca_         148 -----------TSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPG  214 (254)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHH
T ss_pred             -----------hhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHH
Confidence                       68999999999999999999999999  99999999999999875441  122233345566665 699


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCcccccCh
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNVAQASS  293 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~  293 (319)
                      |+|++++||+ |+.++++||+.|. |+|+...+.
T Consensus       215 dvA~~v~fL~-S~~a~~itG~~i~vDGG~t~gp~  247 (254)
T d1hdca_         215 EIAGAVVKLL-SDTSSYVTGAELAVDGGWTTGPT  247 (254)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTTTTTSCC
T ss_pred             HHHHHHHHHh-chhhCCCCCceEEeCCCccCCCC
Confidence            9999999999 7999999999888 777665443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.3e-48  Score=337.01  Aligned_cols=234  Identities=23%  Similarity=0.245  Sum_probs=205.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++       +.+++.+|++++++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999998888776533       577899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|+|.++     +.++|+++||. +..+.|    
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~~~i~~~ss~-~~~~~~----  143 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-----NPGSIVLTASR-VYLGNL----  143 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CCEEEEEECCG-GGGCCT----
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-----ccceeeeeccc-cccCCC----
Confidence            99999999999998655  3468889999999999999999999999999874     46677777764 444433    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~  260 (319)
                                 +...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....  ..+.+....|..++.+|+
T Consensus       144 -----------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pe  210 (242)
T d1ulsa_         144 -----------GQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPL  210 (242)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHH
Confidence                       468999999999999999999999999  99999999999999987762  334556667888889999


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+.++||+ |+.++++||+.|. |+|..
T Consensus       211 dia~~v~fL~-S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         211 EVAYAALFLL-SDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHHHHHHH-SGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHh-chhhCCCCCcEEEECCCcc
Confidence            9999999999 7999999999888 55543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.1e-48  Score=343.44  Aligned_cols=236  Identities=25%  Similarity=0.304  Sum_probs=209.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...  +.++.++++|++++++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999999765  66899999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHH--hcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          108 PLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETM--GKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       108 ~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l--~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++|+||||||+...  ..+.+.++|++.+++|+.++++++|+++|+|  .++     ..++||+++|..+..+.|+    
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-----~~g~Ii~i~S~~~~~~~~~----  149 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-----GTGRIVNIASTGGKQGVVH----  149 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-----TEEEEEEECCGGGTSCCTT----
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-----CCccccccccccccccccc----
Confidence            99999999998654  3467889999999999999999999999974  333     3689999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------------hhHHHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------------SFFSGLVGL  250 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~  250 (319)
                                 +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|....             ...+.+.+.
T Consensus       150 -----------~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~  216 (257)
T d2rhca1         150 -----------AAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR  216 (257)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc
Confidence                       78999999999999999999999999  9999999999999986543             122334445


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|.+++.+|+|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       217 ~PlgR~~~pedia~~v~fL~-S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         217 VPIGRYVQPSEVAEMVAYLI-GPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             STTSSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHh-CchhcCCcCceEEECcCc
Confidence            67788899999999999999 7999999999888 5554

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.3e-48  Score=338.44  Aligned_cols=235  Identities=26%  Similarity=0.315  Sum_probs=210.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.++++..  +.++.++++|++++++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999874 6888888888888766  678999999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      +|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|+|+++     +.|+||++||.++..+.|+       
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~IVnisS~~~~~~~~~-------  147 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-----RKGRIINIASVVGLIGNIG-------  147 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCTHHHHCCTT-------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-----CCcEEEEEcChhhcCCCCC-------
Confidence            9999999998655  4467889999999999999999999999999875     4899999999999986554       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCCHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~va~  264 (319)
                              ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....  ...+.+....+..++.+|+|+|+
T Consensus       148 --------~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~  217 (244)
T d1edoa_         148 --------QANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAG  217 (244)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHH
T ss_pred             --------CHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                    68999999999999999999999999  9999999999999998766  23344555567788899999999


Q ss_pred             HHHHHhcCCCccCCCccccc-CCcc
Q 020927          265 TTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       265 ~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .++||+.|+.++++||+.+. |+|.
T Consensus       218 ~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         218 LVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHCCchhcCCcCCeEEeCCCe
Confidence            99999768999999999888 5554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.9e-48  Score=340.38  Aligned_cols=238  Identities=26%  Similarity=0.256  Sum_probs=208.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..   +.++.++++|++++++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999888887743   458999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|+++.    ..++||++||..+..+.|+    
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~----~gg~Ii~isS~~~~~~~~~----  151 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG----LGASIINMSSIEGFVGDPS----  151 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS----SCEEEEEECCGGGTSCCTT----
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcC----CCCceEeeeccceeccCCC----
Confidence            9999999999998654  45678899999999999999999999999998752    2458999999999886554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHH--hccCCCcEEEEEeeCCcccCCcccCchhHHH---HHHHHhhhhcCC
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARR--LKEDGVDITANSVHPGAITTNLFRNISFFSG---LVGLLGKYVIKN  258 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~  258 (319)
                                 ...|++||+|+.+|++++|.|  ++++|  ||||+|+||+++|++.......+.   .....|..++.+
T Consensus       152 -----------~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~  218 (251)
T d1zk4a1         152 -----------LGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGE  218 (251)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBC
T ss_pred             -----------chhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcC
Confidence                       689999999999999999998  56788  999999999999999876532222   223356777889


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |+|+|+.++||+ |+.+.++||+.|. |+|.
T Consensus       219 pedvA~~v~fL~-S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         219 PNDIAYICVYLA-SNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHh-CchhCCCcCcEEEECccc
Confidence            999999999999 7999999999888 6664

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.5e-48  Score=339.72  Aligned_cols=235  Identities=26%  Similarity=0.327  Sum_probs=209.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++.++++|++++++++++++++.+++|++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            78999999999999999999999999999999999999999999776  6689999999999999999999999999999


Q ss_pred             cEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          110 NILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       110 d~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      |+||||||+...  ..+.+.++|++.+++|+.|+++++|+++|+|.++    +..++||++||.++..+.|+        
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~----~~~g~Iv~isS~~~~~~~~~--------  147 (255)
T d1gega_          80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE----GHGGKIINACSQAGHVGNPE--------  147 (255)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TSCEEEEEECCGGGTSCCTT--------
T ss_pred             cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhh----ccccccccccchhhcccCcc--------
Confidence            999999998654  3467889999999999999999999999988765    24678999999999886554        


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHHHHHHhhh
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGLVGLLGKY  254 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~  254 (319)
                             +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....             ....+.+.+|..
T Consensus       148 -------~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  218 (255)
T d1gega_         148 -------LAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG  218 (255)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC
T ss_pred             -------cccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCC
Confidence                   78999999999999999999999999  99999999999999866541             122334456778


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       219 R~~~peevA~~v~fL~-S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         219 RLSEPEDVAACVSYLA-SPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             SCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESSSS
T ss_pred             CCcCHHHHHHHHHHHh-CchhCCccCcEEEecCCE
Confidence            8899999999999999 7999999999888 5554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.7e-48  Score=338.63  Aligned_cols=236  Identities=25%  Similarity=0.308  Sum_probs=194.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++..  +..+.++..  +.++.++.+|++++++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999997643  222333333  678999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.++|++.+++|+.++++++|.++|+|+++     +.|+||++||.++..+.|+    
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~G~Iv~isS~~~~~~~~~----  148 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-----GWGRIINLTSTTYWLKIEA----  148 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGGSCCSS----
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-----CCCCccccccchhcccCcc----
Confidence            9999999999998654  3467889999999999999999999999999886     4799999999999886554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHH---HHH-HHhhhhcCCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSG---LVG-LLGKYVIKNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~-~~~~~~~~~~  259 (319)
                                 ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.........   ... ..+..++.+|
T Consensus       149 -----------~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~p  215 (247)
T d2ew8a1         149 -----------YTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVP  215 (247)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCCCT
T ss_pred             -----------cccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCH
Confidence                       68999999999999999999999999  999999999999998765522111   111 1244567899


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       216 edvA~~v~fL~-S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         216 LDLTGAAAFLA-SDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHHHHHHT-SGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHHh-CchhcCCcCCeEEECCCE
Confidence            99999999999 7999999999888 5554

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-48  Score=339.01  Aligned_cols=233  Identities=22%  Similarity=0.251  Sum_probs=203.5

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.++      ..++.++.+|++++++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~------~~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE------LPGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------cCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999887776554      335789999999999999999999999


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      +|++|+||||||+...   ..+.+.++|++++++|+.+++++++.++|+|+++      +|+||++||..+..+.|.   
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~~~~~---  147 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIGQAQ---  147 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHCCTT---
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCcccccccccccccC---
Confidence            9999999999997543   3357889999999999999999999999999864      689999999999986554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhh
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKY  254 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~  254 (319)
                                  ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.+..        ..........|..
T Consensus       148 ------------~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~  213 (250)
T d1ydea1         148 ------------AVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG  213 (250)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS
T ss_pred             ------------cchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC
Confidence                        68999999999999999999999999  9999999999999986543        1223333445677


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ++.+|+|+|++++||+ |+ ++++||+.|. |+|..
T Consensus       214 R~g~p~eva~~v~fL~-Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         214 RMGQPAEVGAAAVFLA-SE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             SCBCHHHHHHHHHHHH-HH-CTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHh-Cc-cCCCcCCeEEECCCcc
Confidence            8889999999999998 55 7899999887 66654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.8e-48  Score=336.29  Aligned_cols=228  Identities=22%  Similarity=0.334  Sum_probs=198.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++++++++++++++.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998643             3467889999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +++|++|+||||||+...  ..+.+.++|++++++|+.+++.++|.++|+|+++     +.|+||++||.++..+.|+  
T Consensus        69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~Iv~isS~~~~~~~~~--  141 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-----KFGRMIFIGSVSGLWGIGN--  141 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCCC-----C--
T ss_pred             HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-----CCCceEEEcchhhccCCcc--
Confidence            999999999999998654  4467889999999999999999999999999885     5789999999999876553  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhhhhcCCH
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~  259 (319)
                                   ...|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.+...  ......+.++..++.+|
T Consensus       142 -------------~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~p  206 (237)
T d1uzma1         142 -------------QANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTP  206 (237)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCH
T ss_pred             -------------cHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCH
Confidence                         78999999999999999999999999  99999999999999987652  22344456778888999


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g  287 (319)
                      ||+|+.++||+ |++++++||+.|. |+|
T Consensus       207 edvA~~v~fL~-S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         207 AEVAGVVSFLA-SEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHHHHHHHHHH-SGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHh-CchhcCCcCCeEEECCC
Confidence            99999999999 7999999999888 555

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.4e-48  Score=335.84  Aligned_cols=233  Identities=26%  Similarity=0.261  Sum_probs=201.9

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      -|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++       ...++++|++++++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999999976543 33322       3457899999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|+||+||||||+..+  ..+.+.++|++.+++|+.++++++|+++|+|+++     +.|+||+++|..+..+.|+    
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~Ii~isS~~~~~~~~~----  144 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-----GGGAIVNVASVQGLFAEQE----  144 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-----TCEEEEEECCGGGTSBCTT----
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-----ccccccccccccccccccc----
Confidence            9999999999998655  4567889999999999999999999999999875     4789999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKYV  255 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~  255 (319)
                                 ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....        .....+....+..+
T Consensus       145 -----------~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R  211 (248)
T d2d1ya1         145 -----------NAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRR  211 (248)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSS
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCC
Confidence                       78999999999999999999999999  9999999999999986533        12233444556778


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +.+|+|+|+.++||+ |+.++++||+.|. |+|..
T Consensus       212 ~~~pedia~~v~fL~-S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         212 LGKPEEVAEAVLFLA-SEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             CBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHh-CchhcCCCCcEEEcCcCcc
Confidence            889999999999999 7999999999888 66653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-47  Score=340.10  Aligned_cols=267  Identities=22%  Similarity=0.272  Sum_probs=224.5

Q ss_pred             cccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC---CCceEEEEcCCCCHHHHHH
Q 020927           21 VTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP---NAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        21 ~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~   97 (319)
                      +.++..|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++....+   +.++.++.+|+++++++++
T Consensus         4 y~~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~   83 (297)
T d1yxma1           4 YLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   83 (297)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence            4456779999999999999999999999999999999999999999999999986543   5689999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927           98 FASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +++++.+++|++|+||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.++     +.++||++|+. +..
T Consensus        84 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~Ii~~ss~-~~~  157 (297)
T d1yxma1          84 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-----HGGSIVNIIVP-TKA  157 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-----HCEEEEEECCC-CTT
T ss_pred             HHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-----ccccccccccc-ccc
Confidence            999999999999999999997544  4467889999999999999999999999999876     47789888664 333


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------hhHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------SFFSGLVG  249 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~  249 (319)
                      ..|               ....|++||+|+.+|+++||.|++++|  ||||+|+||+++|++....      ...+...+
T Consensus       158 ~~~---------------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  220 (297)
T d1yxma1         158 GFP---------------LAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ  220 (297)
T ss_dssp             CCT---------------TCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG
T ss_pred             ccc---------------ccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhhccccCHHHHHHHHh
Confidence            333               468899999999999999999999999  9999999999999986433      22233445


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccccc------------ChhccCHHHHHHHHHHHHHH
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQA------------SSQAVNTELAQKLWDFSSDL  311 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~------------~~~~~~~~~~~~~~~~~~~~  311 (319)
                      .++..++.+|+|+|+.++||+ |+.++++||+.|. |+|....            +....+.+..+++|+.+++.
T Consensus       221 ~~plgR~g~pedvA~~v~fL~-Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (297)
T d1yxma1         221 KIPAKRIGVPEEVSSVVCFLL-SPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK  294 (297)
T ss_dssp             GSTTSSCBCTHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCHHHHHHHHHHHh-CchhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHHh
Confidence            567788899999999999999 7999999999888 6665432            12223446778888876654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.6e-47  Score=332.25  Aligned_cols=240  Identities=25%  Similarity=0.264  Sum_probs=210.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+|+||+||||||++|||+++|++|+++|++|++++|+++.++++.+++...  +..++++.+|++++++++++++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999988776  66788999999999999999999999


Q ss_pred             cC-CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          105 SG-LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       105 ~~-~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      ++ +.+|+||||||+...  ..+.+.++|++++++|+.+++.+.++++|.|.++     ..|+||+++|.++..+.|.  
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-----~~g~ii~isS~~~~~~~~~--  152 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-----QNGNVIFLSSIAGFSALPS--  152 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TSEEEEEECCGGGTSCCTT--
T ss_pred             HhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-----ccccccccccccccccccc--
Confidence            88 689999999998655  4467889999999999999999999999999886     5899999999999886554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGK  253 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~  253 (319)
                                   +..|+++|+|+++|++.|++|++++|  ||||+|+||+++|++....        .....+....+.
T Consensus       153 -------------~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  217 (258)
T d1ae1a_         153 -------------VSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM  217 (258)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHSTT
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC
Confidence                         78999999999999999999999999  9999999999999987654        233445556678


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .++.+|+|+|++++||+ |+.+.++||+.|. |+|..
T Consensus       218 gR~~~pediA~~v~fL~-S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLC-FPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             CSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHh-ChhhCCCcCcEEEeCCCee
Confidence            88999999999999999 7999999999877 66654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.2e-48  Score=339.25  Aligned_cols=237  Identities=24%  Similarity=0.272  Sum_probs=205.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.+..++++|++++++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999998888776     667889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+..+  ..+.+.++|++.+++|+.+++++++.++|+|+++      .|+||++||.++..+.|.    
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~------~G~Iv~isS~~~~~~~~~----  147 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSCCTT----
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc------CCceecccchhhhcCccc----
Confidence            9999999999998655  4467889999999999999999999999999753      699999999999886554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHH----HHHhhhhc
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLV----GLLGKYVI  256 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~----~~~~~~~~  256 (319)
                                 ...|++||+|+.+|+++++.|++++|.+||||+|+||+++|++.+..   .......    ...+.+++
T Consensus       148 -----------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~  216 (253)
T d1hxha_         148 -----------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRA  216 (253)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCE
T ss_pred             -----------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCC
Confidence                       78999999999999999999999854449999999999999986432   1111111    11234466


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .+|+|+|++++||+ |+.++++||+.+. |+|..
T Consensus       217 ~~pedvA~~v~fL~-S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         217 YMPERIAQLVLFLA-SDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             ECHHHHHHHHHHHH-SGGGTTCCSCEEEESSSCT
T ss_pred             CCHHHHHHHHHHHh-ChhhCCCcCcEEEECccHh
Confidence            78999999999999 7999999999888 66654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.8e-47  Score=336.88  Aligned_cols=241  Identities=24%  Similarity=0.271  Sum_probs=201.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.... +..++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999998763 345799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc-ccCC
Q 020927          105 SGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH-QFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~-~~~~  177 (319)
                      ++|++|+||||||+..+      ..+.+.++|++.+++|+.+++.+++.++|+|+++      .+++|+++|..+ ..+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~~~  155 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLHAT  155 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSSCC
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeeccccccC
Confidence            99999999999998543      2235678999999999999999999999999874      577777777654 5554


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-----------hHHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-----------FFSG  246 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-----------~~~~  246 (319)
                      |               .+..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....           ....
T Consensus       156 ~---------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (264)
T d1spxa_         156 P---------------DFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT  218 (264)
T ss_dssp             T---------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHH
T ss_pred             C---------------CchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHH
Confidence            4               368899999999999999999999999  99999999999999876541           1223


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +.+.+|.+++.+|+|+|++++||++.+.++++||+.|. |+|..
T Consensus       219 ~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         219 MKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            44556778889999999999999943568999999888 55543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.1e-47  Score=330.88  Aligned_cols=232  Identities=25%  Similarity=0.350  Sum_probs=202.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++      ..+..+.+|++++++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~----   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH----
Confidence            6899999999999999999999999999999999999998877766543      357889999999999877654    


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|+||||||+...  ..+.+.++|++.+++|+.+++.++|.++|.|.++    +..|+||+++|..+..+.|+   
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~ii~isS~~~~~~~~~---  143 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR----GVPGSIVNVSSMVAHVTFPN---  143 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCTT---
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh----cccCcccccchhhccccCCc---
Confidence            67999999999998654  4467889999999999999999999999987653    24789999999999886554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  258 (319)
                                  ...|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++....    .....+.+..|..++.+
T Consensus       144 ------------~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~  209 (242)
T d1cyda_         144 ------------LITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAE  209 (242)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBC
T ss_pred             ------------cccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcC
Confidence                        68999999999999999999999999  9999999999999986654    33455666778888999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |||+|+.++||+ ++.++++||+.|. |+|+
T Consensus       210 peeva~~v~fL~-S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         210 VEDVVNSILFLL-SDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHHHHHHHHHH-SGGGTTCCSSEEEESTTG
T ss_pred             HHHHHHHHHHHh-CchhcCcCCceEEeCcch
Confidence            999999999999 7999999999888 6664

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.1e-47  Score=334.18  Aligned_cols=243  Identities=23%  Similarity=0.257  Sum_probs=209.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||+||||||++|||+++|++|+++|++|++++|+++.++++.+++..   ..++.++.+|++++++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999988888744   346888999999999999999999999


Q ss_pred             CCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          106 GLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       106 ~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      +|++|+||||||+...    ..+.+.++|++++++|+.++++++|.++|+|.++     +.|+||+++|..+..+.++  
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~g~ii~iss~~~~~~~~~--  152 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-----KKGSIVFTASISSFTAGEG--  152 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-----TCEEEEEECCGGGTCCCTT--
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-----CCCCccccccccccccccc--
Confidence            9999999999998643    2356778999999999999999999999999875     4789999999998875432  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhHHHHHHH--Hhhh
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFFSGLVGL--LGKY  254 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~--~~~~  254 (319)
                                  ....|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....     .........  .+..
T Consensus       153 ------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g  218 (268)
T d2bgka1         153 ------------VSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG  218 (268)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS
T ss_pred             ------------cccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC
Confidence                        234799999999999999999999999  9999999999999997665     111222211  2345


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccCh
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASS  293 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~  293 (319)
                      ++.+|+|+|++++||+ |+.+.++||+.|. |+|.....+
T Consensus       219 r~~~pedvA~~v~fL~-S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         219 TLLRAEDVADAVAYLA-GDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             CCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGCCT
T ss_pred             CCcCHHHHHHHHHHHh-ChhhCCccCceEEECcCcccCCC
Confidence            6789999999999999 7999999999888 777765443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.4e-47  Score=336.84  Aligned_cols=251  Identities=24%  Similarity=0.261  Sum_probs=214.4

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..|+++||+||||||++|||+++|++|+++|++|++++|+.+.++++.+++.++. +.++.++.+|++++++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999998888888886654 567999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+++|++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.++    +..++|++++|.......+..
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~----~~~g~i~~~~s~~~~~~~~~~  157 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK----QQKGSIVVTSSMSSQIINQSS  157 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCEEE
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc----ccceEEEEeeccccccccccc
Confidence            9999999999999998654  4467889999999999999999999999998654    246788888887765432210


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCC
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKN  258 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~  258 (319)
                              ..+..+...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....  ...+.....+|..++.+
T Consensus       158 --------~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~  227 (260)
T d1h5qa_         158 --------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQ  227 (260)
T ss_dssp             --------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBC
T ss_pred             --------cccCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcC
Confidence                    00122357899999999999999999999999  9999999999999998766  33345566678888999


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+|+.++||+ |+.++++||+.|. |+|..
T Consensus       228 pedvA~~v~fL~-S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         228 PEEMTGQAILLL-SDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             GGGGHHHHHHHH-SGGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHHHHHh-cchhCCCcCceEEECCCee
Confidence            999999999999 7999999999888 66653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-47  Score=329.75  Aligned_cols=233  Identities=22%  Similarity=0.261  Sum_probs=202.2

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++      ..+..+.+|++++++++++++   
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~---   72 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH---
Confidence            46789999999999999999999999999999999999998887766553      357889999999999877664   


Q ss_pred             hcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          104 SSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                       +++++|+||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++    +..|+||+++|.++..+.|.  
T Consensus        73 -~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~----~~~g~Ii~isS~~~~~~~~~--  145 (244)
T d1pr9a_          73 -SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR----GVPGAIVNVSSQCSQRAVTN--  145 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH----TCCEEEEEECCGGGTSCCTT--
T ss_pred             -HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh----CCcceEeecccccccccccc--
Confidence             67899999999998654  3467889999999999999999999999976543    24789999999999886554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHhhhhcC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~  257 (319)
                                   ...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++....    .....+...+|..++.
T Consensus       146 -------------~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~  210 (244)
T d1pr9a_         146 -------------HSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFA  210 (244)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCB
T ss_pred             -------------hhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCc
Confidence                         68999999999999999999999999  9999999999999987654    2334455566778889


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +|+|+|+.++||+ |+.++++||+.|. |+|+
T Consensus       211 ~peevA~~v~fL~-S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         211 EVEHVVNAILFLL-SDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             CHHHHHHHHHHHH-SGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHh-CchhCCcCCcEEEECccH
Confidence            9999999999999 7999999999888 6665

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.2e-47  Score=336.47  Aligned_cols=252  Identities=21%  Similarity=0.195  Sum_probs=209.6

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+|+||+||||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++..+.+|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999998888776655     56799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC-------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCC
Q 020927          105 SGLPLNILINNAGIMATP-------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSY  177 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~  177 (319)
                      +++++|+||||||+....       .+.+.+.|++++++|+.+++.++|.++|+|+++      +|+||+++|..+..+.
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~~~  149 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFYPN  149 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSTT
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhccCC
Confidence            999999999999986431       122234699999999999999999999999874      6899999999988865


Q ss_pred             CCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------hhHH
Q 020927          178 PEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------SFFS  245 (319)
Q Consensus       178 p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------~~~~  245 (319)
                      |+               ...|++||+|+.+|+++||.|+++ +  ||||+|+||+++|++....            ...+
T Consensus       150 ~~---------------~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  211 (276)
T d1bdba_         150 GG---------------GPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLAD  211 (276)
T ss_dssp             SS---------------CHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCGGGC---------CHHH
T ss_pred             CC---------------CchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCccchhhhhhccCcHHHHH
Confidence            54               688999999999999999999985 5  9999999999999986543            1222


Q ss_pred             HHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccccc--ChhccCHHHHHHHH
Q 020927          246 GLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQA--SSQAVNTELAQKLW  305 (319)
Q Consensus       246 ~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~--~~~~~~~~~~~~~~  305 (319)
                      .+...+|..++.+|+|+|++++||++++.++++||+.+. |+|....  .......++.+++|
T Consensus       212 ~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~~~~~~~~~~~~~~  274 (276)
T d1bdba_         212 MLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDLLEQLN  274 (276)
T ss_dssp             HHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSSCSCSCTTHHHHHT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhcceeCCCCCcchHHHhc
Confidence            333456778889999999999999943579999999888 6665532  23333345555544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.8e-47  Score=337.21  Aligned_cols=244  Identities=23%  Similarity=0.207  Sum_probs=207.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+... ..++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999987642 35799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC----cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          105 SGLPLNILINNAGIMATP----FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      ++|++|+||||||.....    .+.+.+.|++.+++|+.+++.++|+++|+|+++     +.++|+++||.++..+.|  
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-----~~g~ii~~ss~~~~~~~~--  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-----KGEIVNVSSIVAGPQAHS--  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEECCGGGSSSCCT--
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-----ccccccchhhhhccccCC--
Confidence            999999999999975331    234668899999999999999999999999874     467888888888777544  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHH---H----H
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGL---V----G  249 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~---~----~  249 (319)
                                   ++..|++||+|+.+|+++||.|++++|  ||||+|+||+++|++.....    ..+..   .    .
T Consensus       154 -------------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  218 (274)
T d1xhla_         154 -------------GYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE  218 (274)
T ss_dssp             -------------TSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT
T ss_pred             -------------CCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHc
Confidence                         368999999999999999999999999  99999999999999865431    11111   1    2


Q ss_pred             HHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccccc
Q 020927          250 LLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQA  291 (319)
Q Consensus       250 ~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~  291 (319)
                      .+|.+++.+|+|+|+.++||++.+.++++||+.+. |+|....
T Consensus       219 ~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         219 CIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence            24677888999999999999932468999999888 6665443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4e-47  Score=336.01  Aligned_cols=242  Identities=23%  Similarity=0.218  Sum_probs=204.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.. ++.++.++.+|++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998763 34579999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCC------cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc-ccccC
Q 020927          104 SSGLPLNILINNAGIMATP------FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR-RHQFS  176 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~-~~~~~  176 (319)
                      +++|++|+||||||+..+.      .+.+.+.|++++++|+.+++.++++++|+|+++      ++++|+++|. ++..+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~~  154 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQA  154 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSSC
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhccccC
Confidence            9999999999999986541      134556799999999999999999999999874      5677777664 55665


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhH----HH------
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF----SG------  246 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~----~~------  246 (319)
                      .|               .+..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.......    ..      
T Consensus       155 ~~---------------~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  217 (272)
T d1xkqa_         155 QP---------------DFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMA  217 (272)
T ss_dssp             CC---------------SSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             CC---------------CcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhccCCchHHHHHHHHHHH
Confidence            44               478999999999999999999999999  9999999999999987654211    11      


Q ss_pred             -HHHHHhhhhcCCHHHHHHHHHHHhcCCC-ccCCCccccc-CCcccc
Q 020927          247 -LVGLLGKYVIKNVEQGAATTCYVALHPH-VKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       247 -~~~~~~~~~~~~~~~va~~i~~l~~s~~-~~~~~G~~~~-~~g~~~  290 (319)
                       ....+|.+++.+|+|+|++++||+ |++ +.++||+.|. |+|...
T Consensus       218 ~~~~~~PlgR~g~pediA~~v~fL~-S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         218 SHKECIPIGAAGKPEHIANIILFLA-DRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HCTTTCTTSSCBCHHHHHHHHHHHH-CHHHHTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCCcCHHHHHHHHHHHh-CcchhCCccCeEEEeCcCHHH
Confidence             112246677889999999999999 555 5689999888 666543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-46  Score=327.48  Aligned_cols=234  Identities=26%  Similarity=0.315  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++....++.++.++++|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999999887777899999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      |++|+||||||+.      ..++|++.+++|+.+++.+++.++|+|.++.  .+..|+||++||.++..+.|+       
T Consensus        81 G~iDilVnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--~~~~g~Iv~isS~~~~~~~~~-------  145 (254)
T d2gdza1          81 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQN--GGEGGIIINMSSLAGLMPVAQ-------  145 (254)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCTT-------
T ss_pred             CCcCeeccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHhh--cCCCcEEEeeccHhhccCCCC-------
Confidence            9999999999974      3467999999999999999999999998752  123589999999999987654       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHH--HHHHhccCCCcEEEEEeeCCcccCCcccCc----------hhHHHHHHHHhhh
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSE--LARRLKEDGVDITANSVHPGAITTNLFRNI----------SFFSGLVGLLGKY  254 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~--la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~  254 (319)
                              +..|++||+|+.+|+|+  |+.|++++|  ||||+|+||+++|+|....          ...+.+...++..
T Consensus       146 --------~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  215 (254)
T d2gdza1         146 --------QPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY  215 (254)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred             --------ccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC
Confidence                    68999999999999997  788999999  9999999999999987654          1234455667888


Q ss_pred             hcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          255 VIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       255 ~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ++.+|+|+|++++||++ +.  ++||+.+. |+|.
T Consensus       216 r~~~pedvA~~v~fL~s-~~--~itG~~i~VdGG~  247 (254)
T d2gdza1         216 GILDPPLIANGLITLIE-DD--ALNGAIMKITTSK  247 (254)
T ss_dssp             CCBCHHHHHHHHHHHHH-CT--TCSSCEEEEETTT
T ss_pred             CCcCHHHHHHHHHHHHc-CC--CCCCCEEEECCCC
Confidence            88999999999999994 43  49999988 5554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-46  Score=327.43  Aligned_cols=243  Identities=22%  Similarity=0.238  Sum_probs=211.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +++||+||||||++|||+++|+.|+++|++|++++|++++++++.+++....++.++.+++||++++++++++++++.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            38999999999999999999999999999999999999999999999999876779999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|+||+||||||....  ..+.+.+.|+..+++|+.+++++.+.++|.|+++.   ...|+||+++|.++....|.    
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~---~~~g~Ii~isS~~~~~~~p~----  159 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN---VDDGHIININSMSGHRVLPL----  159 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT---CCSCEEEEECCGGGTSCCSC----
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhc---cCCCceEEEechHhcCCCCC----
Confidence            9999999999998654  45788899999999999999999999999998642   23689999999998765442    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHh--ccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRL--KEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~--~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~  259 (319)
                               .....|+++|+++.+|+++|+.|+  ++.|  |+||+|+||+++|++....  ...+......+..++.+|
T Consensus       160 ---------~~~~~Y~~sKaal~~ltr~la~el~~~~~~--I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~p  228 (257)
T d1xg5a_         160 ---------SVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKP  228 (257)
T ss_dssp             ---------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCH
T ss_pred             ---------cccHHHHHHHHHHHhCHHHHHHHHHhCCCC--EEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCH
Confidence                     235679999999999999999998  6677  9999999999999987654  233456667788888999


Q ss_pred             HHHHHHHHHHhcCCCccCCCccc-ccCCc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSY-FADSN  287 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~-~~~~g  287 (319)
                      +|+|++++||+ ++.++++||+. +.++|
T Consensus       229 edvA~~v~fL~-s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         229 EDVAEAVIYVL-STPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHHHHHHHH-HSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHHHHh-CChhcCeECCEEEEeCC
Confidence            99999999999 68899999985 44655

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=5.9e-46  Score=322.63  Aligned_cols=233  Identities=24%  Similarity=0.227  Sum_probs=200.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998877665544     668999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||....  ..+.+.+.|++++++|+.+++.++|.++|+|.+       .+.|+++||.+... .|     
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~~-~~-----  143 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGLG-AF-----  143 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTCC-HH-----
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeecccccccc-cc-----
Confidence            9999999999998654  447788999999999999999999999999865       45666666655443 23     


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHhhhhcCCHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~  261 (319)
                                ++..|+++|+|+++|+++|++|++++|  ||||+|+||+++|++....  ...+.+....+..++.+|+|
T Consensus       144 ----------~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~d  211 (241)
T d2a4ka1         144 ----------GLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEE  211 (241)
T ss_dssp             ----------HHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHH
T ss_pred             ----------CccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHH
Confidence                      467899999999999999999999999  9999999999999998765  33445666678888899999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +|++++||+ |+.+.++||+.+. |+|..
T Consensus       212 va~~v~fL~-S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         212 VAQAALFLL-SEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHh-cchhCCCcCceEEeCCCcc
Confidence            999999999 7999999999888 66643

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-45  Score=322.51  Aligned_cols=238  Identities=16%  Similarity=0.186  Sum_probs=199.3

Q ss_pred             CCCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        24 ~~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      .++|+||++|||||+|  |||+++|++|+++|++|++++|+++..+.. +++...  ..+..++++|+++++++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEA--LGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHH--TTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhc--cCcccccccccCCHHHHHHHHHH
Confidence            4789999999999987  999999999999999999999987654443 334344  44678899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          102 FKSSGLPLNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +.+++|++|+||||||+...      ..+.+.++|+..+++|+.+++.+++.++|+|++       .|+||+++|..+..
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~~  152 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEK  152 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTS
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhcC
Confidence            99999999999999997532      235667789999999999999999999999865       57999999999988


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHH
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLL  251 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~  251 (319)
                      +.|+               +..|++||+|+++|+++||.|++++|  ||||+|+||+++|++....    ...+.+.+..
T Consensus       153 ~~~~---------------~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~  215 (256)
T d1ulua_         153 VVPK---------------YNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTA  215 (256)
T ss_dssp             BCTT---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------CHHHHHHHHHHS
T ss_pred             CCCC---------------chHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchhhhHHHHHHHHhcC
Confidence            6554               68999999999999999999999999  9999999999999987665    2334555667


Q ss_pred             hhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          252 GKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       252 ~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |..++.+|+|+|++++||+ |+.++++||+.|. |+|+.
T Consensus       216 pl~R~~~pedvA~~v~fL~-S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         216 PLRRNITQEEVGNLGLFLL-SPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             TTSSCCCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHh-CchhCCccCCeEEECcCEe
Confidence            8888899999999999999 7999999999888 66654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=8.1e-45  Score=315.13  Aligned_cols=222  Identities=22%  Similarity=0.285  Sum_probs=196.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCE-------EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVH-------VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~-------Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ++||||||++|||+++|++|+++|++       |++++|+.+.++++.+++...  +.++.++.+|++++++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            46899999999999999999999987       999999999999999998776  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          103 KSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      .+++|++|+||||||+...  ..+.+.++|++++++|+.|++++++.++|+|+++     +.|+||++||.++..+.|+ 
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-----~~G~Ii~isS~~~~~~~~~-  153 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-----HSGHIFFITSVAATKAFRH-  153 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCTT-
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-----CCCceEEEechhhcCCCCC-
Confidence            9999999999999998654  4467889999999999999999999999999885     4789999999999987664 


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                    +..|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.......       ...++.+|+
T Consensus       154 --------------~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~~~-------~~~~~~~Pe  210 (240)
T d2bd0a1         154 --------------SSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDE-------MQALMMMPE  210 (240)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCST-------TGGGSBCHH
T ss_pred             --------------ChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcCHh-------hHhcCCCHH
Confidence                          78999999999999999999999999  9999999999999998765321       123457899


Q ss_pred             HHHHHHHHHhcCCCccCCCcccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYF  283 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~  283 (319)
                      |+|+.++|+++ +.+.+++|+.+
T Consensus       211 dvA~~v~~l~s-~~~~~~~~~~~  232 (240)
T d2bd0a1         211 DIAAPVVQAYL-QPSRTVVEEII  232 (240)
T ss_dssp             HHHHHHHHHHT-SCTTEEEEEEE
T ss_pred             HHHHHHHHHHc-CCccCccCCEE
Confidence            99999999994 55666666643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.1e-45  Score=320.29  Aligned_cols=236  Identities=23%  Similarity=0.272  Sum_probs=203.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe-CCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAV-RNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |.||+||||||++|||+++|+.|+++|++|++++ |+.+.++++.+++...  +.+++++.+|++++++++++++++.++
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999875 5666678888888765  668999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +|++|+||||||+...  ..+.+.+.|++.+++|+.+++++++.++|+|++       .+++++++|..+...       
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~-------  147 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT-------  147 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC-------
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCccccccccccccc-------
Confidence            9999999999998654  345788999999999999999999999999976       467888887766542       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---------------hhHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---------------SFFSGLV  248 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~  248 (319)
                             +...+..|++||+|+.+|+|+|++|++++|  ||||+|+||+++|++.+..               .+.+.+.
T Consensus       148 -------~~~~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T d1ja9a_         148 -------GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLA  218 (259)
T ss_dssp             -------SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHH
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHH
Confidence                   233478999999999999999999999999  9999999999999875432               1233344


Q ss_pred             HHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          249 GLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       249 ~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      ...+..++.+|+|+|++++||+ |+.+.++||+.|. |+|.
T Consensus       219 ~~~pl~R~g~p~eVa~~v~fL~-S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         219 NMNPLKRIGYPADIGRAVSALC-QEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HTSTTSSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             hCCCCCCCcCHHHHHHHHHHHh-CchhcCCcCceEEeCCCC
Confidence            5667788899999999999999 7999999999888 5553

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.6e-45  Score=322.18  Aligned_cols=231  Identities=17%  Similarity=0.145  Sum_probs=200.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++.... ..       +..+|++++++++++++++.+++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-Cc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999999999988777654432 22       345899999999999999999999999


Q ss_pred             EEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          111 ILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       111 ~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      +||||||+...   ..+.+.++|++.+++|+.++++++|.++|+|+++     +.|+||++||.++..+.|+        
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-----~~G~IV~isS~~~~~~~~~--------  140 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-----KSGHIIFITSATPFGPWKE--------  140 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCCEEEEECCSTTTSCCTT--------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-----ccceeeccccccccccccc--------
Confidence            99999997543   3467889999999999999999999999999885     4799999999999886554        


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----------hhHHHHHHHHhhhhcC
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----------SFFSGLVGLLGKYVIK  257 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~  257 (319)
                             ...|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|++....          .....+.+..+..++.
T Consensus       141 -------~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g  211 (252)
T d1zmta1         141 -------LSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLG  211 (252)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCB
T ss_pred             -------ccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCc
Confidence                   68899999999999999999999999  9999999999999987654          1233455566778889


Q ss_pred             CHHHHHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          258 NVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       258 ~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      +|+|+|+.++||+ |+.++++||+.|. |+|.....
T Consensus       212 ~pedvA~~v~fL~-S~~s~~iTG~~i~vdGG~~~~~  246 (252)
T d1zmta1         212 TQKELGELVAFLA-SGSCDYLTGQVFWLAGGFPMIE  246 (252)
T ss_dssp             CHHHHHHHHHHHH-TTSCGGGTTCEEEESTTCCCCC
T ss_pred             CHHHHHHHHHHHh-CchhcCCcCCeEEECCCceeCC
Confidence            9999999999999 7999999999888 67765543

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.8e-45  Score=313.99  Aligned_cols=226  Identities=19%  Similarity=0.190  Sum_probs=193.6

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++.           ...++.+|+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----------~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----------GHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----------CSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----------CCcEEEcchHHH------HHHHHHHh
Confidence            7899999999999999999999999999999999998655431           345678999874      34455678


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +++|+||||||+...  ..+.+.++|++.+++|+.+++.++|.++|+|+++     +.|+||+++|..+..+.|      
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-----~~G~ii~i~S~~~~~~~~------  133 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-----GWGRIVAITSFSVISPIE------  133 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCGGGTSCCT------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-----cccccccccccccccccc------
Confidence            899999999997544  3467889999999999999999999999999875     478999999998887644      


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHHHHHHhhhhcCCHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGLVGLLGKYVIKNVEQ  261 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~  261 (319)
                               ....|++||+|+.+|+++++.|++++|  ||||+|+||+++|++....   .....+.+..|..++.+|+|
T Consensus       134 ---------~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~ped  202 (234)
T d1o5ia_         134 ---------NLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEE  202 (234)
T ss_dssp             ---------TBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHH
T ss_pred             ---------ccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHH
Confidence                     368999999999999999999999999  9999999999999987654   23344555678888899999


Q ss_pred             HHHHHHHHhcCCCccCCCccccc-CCcccccC
Q 020927          262 GAATTCYVALHPHVKGLTGSYFA-DSNVAQAS  292 (319)
Q Consensus       262 va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~  292 (319)
                      +|+.++||+ |+.++++||+.|. |+|...+|
T Consensus       203 iA~~v~fL~-S~~s~~itG~~i~vDGG~s~~p  233 (234)
T d1o5ia_         203 IASVVAFLC-SEKASYLTGQTIVVDGGLSKFP  233 (234)
T ss_dssp             HHHHHHHHH-SGGGTTCCSCEEEESTTCCCCC
T ss_pred             HHHHHHHHh-ChhhcCCcCcEEEECcccccCC
Confidence            999999999 7999999999887 77776554

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.8e-44  Score=317.80  Aligned_cols=240  Identities=23%  Similarity=0.288  Sum_probs=205.7

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ...+|+||++|||||++|||+++|+.|+++|++|++++|+ .+.++++.+++.+.  +.++.++.+|+++++++.+++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            4466999999999999999999999999999999999876 56677888887766  66899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE  179 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~  179 (319)
                      +.+.++++|++|||+|....  ..+.+.+.|++.+++|+.+++.+++.++|+|.+       .+++++++|..+...   
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~---  159 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAK---  159 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCS---
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccccccc---
Confidence            99999999999999997654  346778999999999999999999999999975       579999998876542   


Q ss_pred             CCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---------------hH
Q 020927          180 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---------------FF  244 (319)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---------------~~  244 (319)
                                 .+..+..|+++|+|+++|+++|+.|++++|  ||||+|+||+++|++.+...               ..
T Consensus       160 -----------~~~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  226 (272)
T d1g0oa_         160 -----------AVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE  226 (272)
T ss_dssp             -----------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHH
T ss_pred             -----------cccchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHH
Confidence                       133467899999999999999999999999  99999999999999754320               01


Q ss_pred             HHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          245 SGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       245 ~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .......|.+++.+|+|+|++++||+ ++.++++||+.|. |+|.
T Consensus       227 ~~~~~~~PlgR~~~peevA~~v~fL~-s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         227 YAAVQWSPLRRVGLPIDIARVVCFLA-SNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHHSCTTCSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTC
T ss_pred             HHHHccCCCCCCcCHHHHHHHHHHHh-CchhcCccCceEeECCCC
Confidence            12334567788899999999999999 7999999999888 5553

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.8e-44  Score=319.82  Aligned_cols=252  Identities=19%  Similarity=0.192  Sum_probs=215.0

Q ss_pred             CCcccccccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHH
Q 020927           15 SSTAEEVTQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLAS   94 (319)
Q Consensus        15 ~~~~~~~~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   94 (319)
                      .|..+.+.+..+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++..+. +.++.++.+|++++++
T Consensus        11 ~~~~~~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~   89 (294)
T d1w6ua_          11 SPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDM   89 (294)
T ss_dssp             CCCCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHH
T ss_pred             CcccccCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHH
Confidence            455666777789999999999999999999999999999999999999999999998887765 5688999999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           95 VRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++++++.+.++++++|+||||||+...  ....+.+.++..+.+|+.+.+.+.+...+.+...    ...+.+++++|..
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~i~~~ss~~  165 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKA----QKGAAFLSITTIY  165 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTH
T ss_pred             HHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccc----cccccccccccch
Confidence            999999999999999999999998655  3456778899999999999999998888877654    2467888999988


Q ss_pred             cccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-----hhHHHH
Q 020927          173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-----SFFSGL  247 (319)
Q Consensus       173 ~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-----~~~~~~  247 (319)
                      +..+.|+               ...|++||+|+++|+++||+|++++|  ||||+|+||+++|++....     ......
T Consensus       166 ~~~~~~~---------------~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  228 (294)
T d1w6ua_         166 AETGSGF---------------VVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEM  228 (294)
T ss_dssp             HHHCCTT---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred             hhhcccc---------------cchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhccCCcHHHHHHH
Confidence            8876553               67899999999999999999999999  9999999999999986543     234455


Q ss_pred             HHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          248 VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       248 ~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      .+.++.+++.+|+|+|+.++||+ ++.+.++||+.|. |+|..
T Consensus       229 ~~~~pl~R~~~pediA~~v~fL~-sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         229 IGRIPCGRLGTVEELANLAAFLC-SDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTHH
T ss_pred             hhcCCCCCCCCHHHHHHHHHHHh-CchhcCCCCcEEEECCChh
Confidence            56678888999999999999999 7899999999888 66643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-43  Score=309.81  Aligned_cols=236  Identities=22%  Similarity=0.226  Sum_probs=203.4

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLAL---RGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~---~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++....++.++.++++|++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999996   799999999999999999999999888889999999999999999999998


Q ss_pred             Hhc----CCCccEEEEccccCCC-----CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          103 KSS----GLPLNILINNAGIMAT-----PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       103 ~~~----~~~id~lv~nag~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .+.    ++.+|++|||||+..+     ..+.+.+.|++++++|+.+++.+++.++|+|+++.   +..++||++||.++
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~~  159 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCA  159 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGG
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCcccccccccccc
Confidence            763    4579999999997543     23567789999999999999999999999998741   13579999999999


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-------hhHHH
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-------SFFSG  246 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-------~~~~~  246 (319)
                      ..+.|+               +..|++||+|+.+|+++|+.|  .+|  ||||+|+||+++|+|....       .....
T Consensus       160 ~~~~~~---------------~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~  220 (259)
T d1oaaa_         160 LQPYKG---------------WGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSK  220 (259)
T ss_dssp             TSCCTT---------------CHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHH
T ss_pred             cCCCcc---------------chHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHH
Confidence            987554               789999999999999999998  567  9999999999999986543       12233


Q ss_pred             HHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCcccccC
Q 020927          247 LVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       247 ~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      +....+..++.+|+|+|+.+++++. + .+++||+.|+.
T Consensus       221 ~~~~~~~~r~~~p~evA~~i~~ll~-~-~s~~TG~~idv  257 (259)
T d1oaaa_         221 LQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEET
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhh-h-ccCCCCCeEEe
Confidence            4444566778899999999999994 4 56999998874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.9e-44  Score=319.48  Aligned_cols=229  Identities=20%  Similarity=0.224  Sum_probs=196.8

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC---------CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR---------NMAACREVKKAIVKEIPNAKVQAMELDLSSLAS   94 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   94 (319)
                      +|+|+||++|||||++|||+++|++|+++|++|++++|         +.+.++++.+++...     .....+|+++.++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHH
Confidence            68899999999999999999999999999999999865         455677777776443     4456789999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           95 VRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ++++++++.+++|++|+||||||+...  ..+.+.++|++.+++|+.|++.+++.++|+|+++     +.|+||++||.+
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-----~~G~IV~isS~~  151 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-----NYGRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-----CCcEEEEeCChh
Confidence            999999999999999999999998755  4467889999999999999999999999999886     479999999999


Q ss_pred             cccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh
Q 020927          173 HQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG  252 (319)
Q Consensus       173 ~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  252 (319)
                      +..+.|+               +..|++||+|+.+|+++|+.|++++|  ||||+|+||++.|++....+  +.      
T Consensus       152 ~~~~~~~---------------~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~~--~~------  206 (302)
T d1gz6a_         152 GIYGNFG---------------QANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVMP--ED------  206 (302)
T ss_dssp             HHHCCTT---------------CHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGSC--HH------
T ss_pred             hcCCCCC---------------cHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcCc--Hh------
Confidence            9986554               78999999999999999999999999  99999999999888755442  11      


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..+..+|+|+|+.++||+ |+.+ ++||+.|. |+|+.
T Consensus       207 ~~~~~~PedvA~~v~fL~-S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         207 LVEALKPEYVAPLVLWLC-HESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             HHHHSCGGGTHHHHHHHT-STTC-CCCSCEEEEETTEE
T ss_pred             hHhcCCHHHHHHHHHHHc-CCCc-CCCCcEEEeCCCce
Confidence            122357999999999998 5654 78999887 66654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-43  Score=304.68  Aligned_cols=216  Identities=28%  Similarity=0.300  Sum_probs=192.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -+++||+||||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++..+.||++++++++++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999765  66899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      ++|++|+||||||+...  ..+.+.+.|++++++|++|++++++.++|+|.++     +.|+||++||.++..+.|    
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~G~Iv~isS~~~~~~~~----  151 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-----NHGHIVTVASAAGHVSVP----  151 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-----TCEEEEEECCCC-CCCHH----
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-----CCceEEEeecchhcCCCC----
Confidence            99999999999998655  4467778999999999999999999999999875     578999999999998655    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc---CCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE---DGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~---~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  259 (319)
                                 +++.|++||+|+.+|+++|+.|+++   +|  |+||+|+||+|+|++.+...        .+.....+|
T Consensus       152 -----------~~~~Y~asKaal~~~~~~La~El~~~~~~g--I~V~~i~PG~v~T~~~~~~~--------~~~~~~~~p  210 (244)
T d1yb1a_         152 -----------FLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNPS--------TSLGPTLEP  210 (244)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCTH--------HHHCCCCCH
T ss_pred             -----------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCC--EEEEEEEcCCCCChhhhCcC--------ccccCCCCH
Confidence                       4789999999999999999999876   46  99999999999999987652        123345689


Q ss_pred             HHHHHHHHHHhcC
Q 020927          260 EQGAATTCYVALH  272 (319)
Q Consensus       260 ~~va~~i~~l~~s  272 (319)
                      +++|+.++..+..
T Consensus       211 e~va~~i~~~~~~  223 (244)
T d1yb1a_         211 EEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.2e-43  Score=308.64  Aligned_cols=234  Identities=24%  Similarity=0.274  Sum_probs=197.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCC-CHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLS-SLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~~i~  103 (319)
                      |+|+||+||||||++|||+++|++|+++|++|++++|+.+..+. .+++....++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999887665444 455566666789999999998 6778999999999


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      +++++||+||||||..      +.+.|++++++|+.|++++++.++|.|.++.  .+..|+||+++|.++..+.|+    
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~~~~g~Ii~isS~~~~~~~~~----  147 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRK--GGPGGIIANICSVTGFNAIHQ----  147 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGG--TCCCEEEEEECCGGGTSCCTT----
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcc--cCCCceEEEEechhhccCCCC----
Confidence            9999999999999963      5688999999999999999999999998752  234689999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHhhhhcCCH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLGKYVIKNV  259 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~  259 (319)
                                 +..|++||+|+.+|+++|+.+++++|  ||||+|+||+++|++.+...    ....+.+........+|
T Consensus       148 -----------~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (254)
T d1sbya1         148 -----------VPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS  214 (254)
T ss_dssp             -----------SHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEH
T ss_pred             -----------CHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCH
Confidence                       78999999999999999999999999  99999999999999866542    22233444455556789


Q ss_pred             HHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          260 EQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       260 ~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      |++|+.+++++.    ...||+.|. |+|.
T Consensus       215 e~va~~~~~~~~----~~~tG~vi~vdgG~  240 (254)
T d1sbya1         215 EQCGQNFVKAIE----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHHHHHHH----HCCTTCEEEEETTE
T ss_pred             HHHHHHHHHhhh----CCCCCCEEEECCCE
Confidence            999999988873    345999776 6654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-43  Score=303.85  Aligned_cols=230  Identities=23%  Similarity=0.293  Sum_probs=195.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+       ...+....+|+.+.+.++...    +.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~~----~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQFA----NE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHHH----HH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeeccccccccccc----cc
Confidence            4899999999999999999999999999999999999887765432       345788889998877665544    45


Q ss_pred             CCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          106 GLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++++|+||||+|....  ..+.+.+.|++.+++|+.+++.+++.++|+|.++     +.|+||+++|..+...       
T Consensus        72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-----~~g~Ii~isS~~~~~~-------  139 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-----KSGNIINMSSVASSVK-------  139 (245)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEECCSBTTTB-------
T ss_pred             cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-----CCceeeeeechhhccC-------
Confidence            6799999999998765  4467889999999999999999999999999875     4789999999877532       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHhhhh
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLGKYV  255 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~  255 (319)
                             ++..+..|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++....        .....+....+..+
T Consensus       140 -------~~~~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R  210 (245)
T d2ag5a1         140 -------GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGR  210 (245)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSS
T ss_pred             -------CccchhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCC
Confidence                   233478899999999999999999999999  9999999999999987643        12334455667788


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      +.+|+|+|+.+.||+ ++.+.++||+.|. |+|.
T Consensus       211 ~~~pedva~~v~fL~-s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         211 FATAEEIAMLCVYLA-SDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             CEEHHHHHHHHHHHH-SGGGTTCCSCEEEECTTG
T ss_pred             CcCHHHHHHHHHHHh-ChhhCCCcCceEEeCCCc
Confidence            889999999999999 7999999999888 6554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-42  Score=306.05  Aligned_cols=239  Identities=28%  Similarity=0.343  Sum_probs=195.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +++|||||++|||+++|++|+++ |++|++++|+.++++++.++++..  +.++.++.+|+++.++++++++++.+++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            45599999999999999999986 899999999999999999999887  557889999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc----
Q 020927          109 LNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR----  182 (319)
Q Consensus       109 id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~----  182 (319)
                      ||+||||||+...  ..+.+.++|+..|++|++|++.+++.++|.|++       .|+||+++|..+..+.+....    
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhh
Confidence            9999999998755  334556789999999999999999999999965       579999999887653322110    


Q ss_pred             ----------------------CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC--CCcEEEEEeeCCcccCCcc
Q 020927          183 ----------------------FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED--GVDITANSVHPGAITTNLF  238 (319)
Q Consensus       183 ----------------------~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~--g~~i~v~~v~PG~v~t~~~  238 (319)
                                            ...-.......+...|++||+++.+|++.++++++++  +.+|+||+|+||+|+|+|.
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                  0000011122334679999999999999999998763  1239999999999999987


Q ss_pred             cCchhHHHHHHHHhhhhcCCHHHHHHHHHHHhc-CCCccCCCcccccCCcccc
Q 020927          239 RNISFFSGLVGLLGKYVIKNVEQGAATTCYVAL-HPHVKGLTGSYFADSNVAQ  290 (319)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~va~~i~~l~~-s~~~~~~~G~~~~~~g~~~  290 (319)
                      ...             ...+|+|+|++++|++. .++..+.+|+|+.+++..+
T Consensus       235 ~~~-------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~  274 (275)
T d1wmaa1         235 GPK-------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ  274 (275)
T ss_dssp             CTT-------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEEC
T ss_pred             cCc-------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEec
Confidence            643             23589999999999974 4566788999998876654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-41  Score=291.03  Aligned_cols=234  Identities=22%  Similarity=0.219  Sum_probs=196.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.......+|+.+.+.++....++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999888887776     667899999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--------CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc-CCCCCeEEEeCCcccccC
Q 020927          106 GLPLNILINNAGIMAT--------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE-SSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       106 ~~~id~lv~nag~~~~--------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~~~ii~isS~~~~~~  176 (319)
                      ++.+|.+++|+++...        ..+.+.+.|++.+++|+.++++++++++|+|..+... ..+.|+||++||..+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence            8899999999886533        2245668899999999999999999999999765322 235789999999999986


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch--hHHHHHHHHhh-
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGLVGLLGK-  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~-  253 (319)
                      .|+               +..|++||+|+++|+++|+.|++++|  ||||+|+||+++|++.....  ....+...++. 
T Consensus       157 ~~~---------------~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~  219 (248)
T d2o23a1         157 QVG---------------QAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP  219 (248)
T ss_dssp             CTT---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred             CCC---------------chHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcCCHHHHHHHHhcCCCC
Confidence            554               78999999999999999999999999  99999999999999987652  22334444553 


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      .++.+|+|+|+.++||+.   .+++||+.|.
T Consensus       220 ~R~g~peevA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         220 SRLGDPAEYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHH---CTTCCSCEEE
T ss_pred             CCCcCHHHHHHHHHHHHh---CCCCCceEeE
Confidence            678899999999999984   4789999764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-40  Score=290.78  Aligned_cols=231  Identities=21%  Similarity=0.237  Sum_probs=181.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEE---EEeCCHHHHHHHHHHHHh-hCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVV---MAVRNMAACREVKKAIVK-EIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv---~~~r~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .|+||||||++|||+++|+.|+++|++|+   ++.|+.+..+++.+.... ...+.++.++.+|++++++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            58899999999999999999999998744   445665544444333333 22366899999999999999999988743


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                        +.+|+||||+|+...  ..+.+.+.|++.+++|+.|+++++++++|+|+++     +.|+||++||.++..+.|.   
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-----~~G~Iv~isS~~g~~~~~~---  151 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-----GSGRVLVTGSVGGLMGLPF---  151 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-----TCEEEEEEEEGGGTSCCTT---
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-----CCCceEEEechhhcCCCCC---
Confidence              789999999998655  3467889999999999999999999999999875     4799999999999987664   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-------------hHHHH--
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-------------FFSGL--  247 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~--  247 (319)
                                  +..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++.....             ...++  
T Consensus       152 ------------~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (285)
T d1jtva_         152 ------------NDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ  217 (285)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHH
Confidence                        68899999999999999999999999  99999999999999876541             11111  


Q ss_pred             ----HHHHhhhhcCCHHHHHHHHHHHhcCCC--ccCCCcccc
Q 020927          248 ----VGLLGKYVIKNVEQGAATTCYVALHPH--VKGLTGSYF  283 (319)
Q Consensus       248 ----~~~~~~~~~~~~~~va~~i~~l~~s~~--~~~~~G~~~  283 (319)
                          ....+..+..+|||+|+.+++++..+.  ..+++|+.+
T Consensus       218 ~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         218 YLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHHHH
Confidence                122345567899999999999996443  334566533

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-39  Score=282.97  Aligned_cols=232  Identities=25%  Similarity=0.275  Sum_probs=181.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +. .+.++.++.+|++++++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-hCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  7999999988776543    22 256899999999999999999999988


Q ss_pred             cCC--CccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc------CCCCCeEEEeCCccc
Q 020927          105 SGL--PLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE------SSKEGRIVNVSSRRH  173 (319)
Q Consensus       105 ~~~--~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~~~~~ii~isS~~~  173 (319)
                      .++  ++|+||||||+..+   ..+.+.++|++.+++|+.|++++++.++|+|+++...      ....++++++++...
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            765  49999999998654   3356778999999999999999999999999875322      124678999998876


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK  253 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  253 (319)
                      ....+.        ...++.+...|++||+|+.+|++.|+.|++++|  |+||+|+||+|+|+|....            
T Consensus       156 ~~~~~~--------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~------------  213 (250)
T d1yo6a1         156 SITDNT--------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN------------  213 (250)
T ss_dssp             CSTTCC--------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------
T ss_pred             cccCCc--------ccccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCC------------
Confidence            654322        111233456799999999999999999999999  9999999999999986532            


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCcccccCCc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFADSN  287 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g  287 (319)
                       ...+||+.++.++..+. ......+|.||..+|
T Consensus       214 -~~~~~e~~a~~~~~~~~-~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         214 -AALTVEQSTAELISSFN-KLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ------HHHHHHHHHHHT-TCCGGGTTCEEETTE
T ss_pred             -CCCCHHHHHHHHHHHHh-cCCCCCCeEEECCCC
Confidence             12579999999999984 444557999987654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.4e-39  Score=280.56  Aligned_cols=228  Identities=21%  Similarity=0.281  Sum_probs=183.7

Q ss_pred             CEEEEeCCCCchhHHHHHHHH---HCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh--
Q 020927           30 LTAIVTGASSGIGTETARVLA---LRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS--  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La---~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~--  104 (319)
                      |+||||||++|||+++|++|+   ++|++|++++|+++.++++.+ +.+.  +.++.++++|++++++++++++++..  
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            799999999999999999997   478999999999988876643 4444  55899999999999999999999854  


Q ss_pred             cCCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhccccc------CCCCCeEEEeCCccccc
Q 020927          105 SGLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARE------SSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~~~~~ii~isS~~~~~  175 (319)
                      +++++|+||||||+...   ..+.+.++|++++++|+.|++.+++.++|+|+++...      ....+++|+++|..+..
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            67899999999998654   2356778899999999999999999999999865321      12478999999998775


Q ss_pred             CCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhh
Q 020927          176 SYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYV  255 (319)
Q Consensus       176 ~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  255 (319)
                      ..+            ...++..|++||+|+.+|+++++.+++++|  |+||+|+||+++|+|......            
T Consensus       160 ~~~------------~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~~------------  213 (248)
T d1snya_         160 QGN------------TDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSAP------------  213 (248)
T ss_dssp             TTC------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTCS------------
T ss_pred             CCC------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccCC------------
Confidence            322            123467899999999999999999999999  999999999999999765411            


Q ss_pred             cCCHHHHHHHHHHHhcCCCccCCCcccccCCcc
Q 020927          256 IKNVEQGAATTCYVALHPHVKGLTGSYFADSNV  288 (319)
Q Consensus       256 ~~~~~~va~~i~~l~~s~~~~~~~G~~~~~~g~  288 (319)
                       .++++.++.++.++. ......+|++|..+|.
T Consensus       214 -~~~~~~~~~i~~~i~-~l~~~~tG~~i~~dG~  244 (248)
T d1snya_         214 -LDVPTSTGQIVQTIS-KLGEKQNGGFVNYDGT  244 (248)
T ss_dssp             -BCHHHHHHHHHHHHH-HCCGGGTTCEECTTSC
T ss_pred             -CCchHHHHHHHHHHH-hcCccCCCcEEEECCe
Confidence             235555666666653 3334568999985553

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-39  Score=283.17  Aligned_cols=217  Identities=24%  Similarity=0.224  Sum_probs=190.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |+||+||||||++|||+++|++|+++|++|++++|+++.++++.+++.... +..+..+.+|+++.+.+..+++++.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999988877664 5688999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          107 LPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      +.+|++|+|||....  ..+.+.+.|++++++|+.|++.+++.++|+|++.      +|+||++||.++..+.|+     
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~~~p~-----  159 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVAYPM-----  159 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSCCTT-----
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcCCCCC-----
Confidence            999999999998654  3456788999999999999999999999999763      789999999999987664     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHHH
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAA  264 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~  264 (319)
                                +..|++||+|+.+|+++|+.|++.++.+|+||+|+||+|+|++....      ..........+|+++|+
T Consensus       160 ----------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~------~~~~~~~~~~~~e~~a~  223 (269)
T d1xu9a_         160 ----------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA------VSGIVHMQAAPKEECAL  223 (269)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH------SCGGGGGGCBCHHHHHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh------ccCCccccCCCHHHHHH
Confidence                      78999999999999999999998655459999999999999975432      11122333468999999


Q ss_pred             HHHHHhc
Q 020927          265 TTCYVAL  271 (319)
Q Consensus       265 ~i~~l~~  271 (319)
                      .++....
T Consensus       224 ~i~~~~~  230 (269)
T d1xu9a_         224 EIIKGGA  230 (269)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9998774

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.9e-38  Score=281.52  Aligned_cols=241  Identities=17%  Similarity=0.173  Sum_probs=191.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhCCCCceEE-----------------EEcCCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVR-NMAACREVKKAIVKEIPNAKVQA-----------------MELDLSS   91 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~v~~-----------------~~~Dl~~   91 (319)
                      .++|||||++|||+++|++|+++|++|+++++ +.+.++++.+++....+. ....                 ..+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            58999999999999999999999999999875 666778888888776533 3333                 4566999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCC--CcccCccccc--------------chhhhhhhHHHHHHHHHHHHHhcc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGIMAT--PFMLSKDNIE--------------LQFATNHIGHFLLTNLLLETMGKT  155 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~~~~--~~~~~~~~~~--------------~~~~vn~~~~~~l~~~~~~~l~~~  155 (319)
                      +++++++++++.+++|++|+||||||+..+  ..+.+.++|+              ..|.+|+.+++++.+.+.+.+...
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            999999999999999999999999998654  2233444443              478999999999999999986533


Q ss_pred             c-ccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCccc
Q 020927          156 A-RESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAIT  234 (319)
Q Consensus       156 ~-~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~  234 (319)
                      . ...+..++||+++|.....+.|               ++..|++||+|+.+|+++|++|++++|  ||||+|+||++.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~---------------~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~t~  224 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLL---------------GYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSV  224 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCT---------------TCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBC
T ss_pred             HHHhcCCCCcccccccccccCCcc---------------ceeeeccccccchhhhHHHHHHhCCcc--cccccccccccc
Confidence            2 2234577899999988887644               368999999999999999999999999  999999999976


Q ss_pred             CCcccCchhHHHHHHHHhh-hhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          235 TNLFRNISFFSGLVGLLGK-YVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       235 t~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +.........+......+. .++.+|+|+|++++||+ |+.++++||+.|. |+|..
T Consensus       225 ~~~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~-S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         225 LVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLC-SSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             CGGGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             ccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-CchhcCccCCeEEECcChh
Confidence            6544443445555555554 77889999999999999 7999999999888 65653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.4e-39  Score=280.21  Aligned_cols=236  Identities=13%  Similarity=0.201  Sum_probs=200.2

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++...  ..+...+..|+++..++...+.++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhh
Confidence            47999999999998  899999999999999999999986544443 444444  4567788999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCCc-------ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          104 SSGLPLNILINNAGIMATPF-------MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~-------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      +.++++|++|||++......       ....+.|...+.+|+.+.+.+.+.+.+.+.+       .+.||++||..+..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  151 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhccC
Confidence            99999999999999754321       2344668889999999999999999998865       558999999998876


Q ss_pred             CCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLG  252 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~  252 (319)
                      .|.               +..|++||+|+++|+++++.|++++|  ||||+|+||+++|++.....    .........|
T Consensus       152 ~~~---------------~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p  214 (258)
T d1qsga_         152 IPN---------------YNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP  214 (258)
T ss_dssp             CTT---------------TTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHST
T ss_pred             CCC---------------cHHHHHHHHHHHHHHHHHHHHhCccC--ceeecccccccccccccccchhhhHHHHHHhCCC
Confidence            554               67899999999999999999999999  99999999999999987652    3334455677


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          253 KYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      ..++.+|||+|+.++||+ ++.++++||+.+. |+|+.
T Consensus       215 l~R~~~peeia~~v~fL~-s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         215 IRRTVTIEDVGNSAAFLC-SDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             TSSCCCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHh-CchhcCccCceEEECcCHH
Confidence            788899999999999999 7999999999888 66754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=5.4e-38  Score=277.44  Aligned_cols=259  Identities=16%  Similarity=0.122  Sum_probs=192.3

Q ss_pred             CCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.  +....+..+|++++++++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHH
Confidence            47999999999875  9999999999999999999999954 45556666666  4567788999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCCc--c-cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          104 SSGLPLNILINNAGIMATPF--M-LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~--~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                      +.++++|++|+|+|+.....  . ...+.+.....++....+.........+...    +..+.|+++++.+...+.+  
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~~~~~~~~~--  152 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL----NNGASVLTLSYLGSTKYMA--  152 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE----EEEEEEEEEECGGGTSBCT--
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc----ccCcceeeecccccccccc--
Confidence            99999999999999865422  1 2222233333333333333333333332221    1234566666666555433  


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh----HHHHHHHHhhhhc
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF----FSGLVGLLGKYVI  256 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~  256 (319)
                                   ....|+++|+|+.+++++++.|++++|  ||||+|+||++.|++......    ........+..++
T Consensus       153 -------------~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~  217 (274)
T d2pd4a1         153 -------------HYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKN  217 (274)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSC
T ss_pred             -------------cchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCccccccCchHHHHHHHhhhhhccCC
Confidence                         367899999999999999999999999  999999999999998876522    2223344567778


Q ss_pred             CCHHHHHHHHHHHhcCCCccCCCccccc-CCcccccChhc--cCHHHHHHHHHHHH
Q 020927          257 KNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVAQASSQA--VNTELAQKLWDFSS  309 (319)
Q Consensus       257 ~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~~  309 (319)
                      .+|+|+|+.++||+ |+.+.++||+.|. |+|+...-.+.  ..++.++++|...+
T Consensus       218 ~~pedIA~~v~fL~-S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~  272 (274)
T d2pd4a1         218 VSLEEVGNAGMYLL-SSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHK  272 (274)
T ss_dssp             CCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSS
T ss_pred             cCHHHHHHHHHHHh-ChhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhc
Confidence            89999999999999 7999999999877 88875544433  44566788897654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.3e-38  Score=281.12  Aligned_cols=243  Identities=16%  Similarity=0.160  Sum_probs=190.8

Q ss_pred             cCCCCCCCEEEEeCCCC--chhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCC---------ce-EEEEcC--
Q 020927           23 QGIDGSGLTAIVTGASS--GIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA---------KV-QAMELD--   88 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~--gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~---------~v-~~~~~D--   88 (319)
                      ++|+|+||++|||||++  |||+++|++|+++|++|++++|++.................         .. ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            57899999999999876  99999999999999999999998765443333222111000         01 222333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHH
Q 020927           89 ------------------LSSLASVRKFASEFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTN  146 (319)
Q Consensus        89 ------------------l~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~  146 (319)
                                        .++..+++++++++.+++|++|+||||||....    ..+.+.++|.+.+++|+.+.+.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              245566789999999999999999999997532    3467889999999999999999999


Q ss_pred             HHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc-cCCCcEEE
Q 020927          147 LLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK-EDGVDITA  225 (319)
Q Consensus       147 ~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~g~~i~v  225 (319)
                      .+++.+.+       .++++++++.+.....+              .....|+++|+++..+++.++.+++ ++|  |||
T Consensus       162 ~~~~~~~~-------~g~~~~~~~~~~~~~~~--------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~g--Irv  218 (297)
T d1d7oa_         162 HFLPIMNP-------GGASISLTYIASERIIP--------------GYGGGMSSAKAALESDTRVLAFEAGRKQN--IRV  218 (297)
T ss_dssp             HHGGGEEE-------EEEEEEEECGGGTSCCT--------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEE
T ss_pred             HHHHHhhc-------CCcceeeeehhhccccc--------------ccccceecccccccccccccchhccccce--EEe
Confidence            99998866       45777777766554321              2356899999999999999999997 578  999


Q ss_pred             EEeeCCcccCCcccCchh----HHHHHHHHhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          226 NSVHPGAITTNLFRNISF----FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       226 ~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+||++.|++......    .+......|.+++.+|+|+|+.++||+ |+.+.++||+.|. |+|..
T Consensus       219 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~-S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         219 NTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLV-SPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             EEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHT-SGGGTTCCSCEEEESTTGG
T ss_pred             cccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CchhcCCcCceEEECcCHh
Confidence            999999999999877533    334455567778899999999999999 7999999999887 66654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.9e-39  Score=289.68  Aligned_cols=239  Identities=13%  Similarity=0.114  Sum_probs=190.9

Q ss_pred             CCCEEEEeC--CCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCC----------ceEEEE---------
Q 020927           28 SGLTAIVTG--ASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNA----------KVQAME---------   86 (319)
Q Consensus        28 ~~k~vlItG--as~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~----------~v~~~~---------   86 (319)
                      .+|++||||  +++|||+++|+.|+++|++|++++++..................          ......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  55799999999999999999999988765444433322211110          112233         


Q ss_pred             -----------cCCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC----CcccCcccccchhhhhhhHHHHHHHHHHHH
Q 020927           87 -----------LDLSSLASVRKFASEFKSSGLPLNILINNAGIMAT----PFMLSKDNIELQFATNHIGHFLLTNLLLET  151 (319)
Q Consensus        87 -----------~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  151 (319)
                                 +|+++.++++++++++.+.+|++|+||||+|....    ..+.+.++|++.+++|+++.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       36678888999999999999999999999997543    346778999999999999999999999999


Q ss_pred             HhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeeC
Q 020927          152 MGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKE-DGVDITANSVHP  230 (319)
Q Consensus       152 l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~g~~i~v~~v~P  230 (319)
                      |++       .|+||++||.++..+.|+              +...|++||+++++|++.|+.|+++ .|  ||||+|+|
T Consensus       161 m~~-------~GsIv~iss~~~~~~~p~--------------y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNaI~P  217 (329)
T d1uh5a_         161 MKP-------QSSIISLTYHASQKVVPG--------------YGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISA  217 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSCCTT--------------CTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEE
T ss_pred             ccc-------ccccccceeehhcccccc--------------cchhhhhhhccccccchhhHHHHhcccC--cEEEEEec
Confidence            965       579999999998887664              1356899999999999999999986 58  99999999


Q ss_pred             CcccCCcccCc-----------------------------------------------hhHHHHHHHHhhhhcCCHHHHH
Q 020927          231 GAITTNLFRNI-----------------------------------------------SFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       231 G~v~t~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~va  263 (319)
                      |+++|++.+.+                                               .....+.+..|..+..+|+|+|
T Consensus       218 G~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA  297 (329)
T d1uh5a_         218 GPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIG  297 (329)
T ss_dssp             CCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHH
T ss_pred             CcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHH
Confidence            99999543321                                               1223344456778889999999


Q ss_pred             HHHHHHhcCCCccCCCccccc-CCcccc
Q 020927          264 ATTCYVALHPHVKGLTGSYFA-DSNVAQ  290 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~-~~g~~~  290 (319)
                      ++++||+ |+.++++||+.|. |+|...
T Consensus       298 ~~v~fLa-Sd~s~~iTGq~i~VDGG~~~  324 (329)
T d1uh5a_         298 SVASFLL-SRESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHHHHHH-SGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHh-CchhCCccCCeEEECCCccc
Confidence            9999999 7999999999888 666543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.4e-37  Score=269.50  Aligned_cols=241  Identities=19%  Similarity=0.154  Sum_probs=191.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCC----CHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLS----SLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~----~~~~v~~~~~~i~~  104 (319)
                      .++|||||++|||+++|++|+++|++|++++|+.+ ..+++.+++.... +.+.....+|+.    .++.++++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998754 4677778887765 446666665554    46778888888888


Q ss_pred             cCCCccEEEEccccCCCCc--c-----------cCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          105 SGLPLNILINNAGIMATPF--M-----------LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~--~-----------~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      ++|++|+||||||+..+..  .           .....+...+.+|+.+.+...+...+.+..........+.++++++.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            9999999999999865421  1           11234556788899999999988888876654444457789999998


Q ss_pred             ccccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHH
Q 020927          172 RHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLL  251 (319)
Q Consensus       172 ~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~  251 (319)
                      .+..+.|+               +..|++||+++++|++.++++++++|  ||||+|+||+++|++.......+.+.+.+
T Consensus       161 ~~~~~~~~---------------~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~  223 (266)
T d1mxha_         161 MTDLPLPG---------------FCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMPQETQEEYRRKV  223 (266)
T ss_dssp             GGGSCCTT---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSCHHHHHHHHTTC
T ss_pred             cccccCcc---------------hhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCCHHHHHHHHhcC
Confidence            88876554               78999999999999999999999999  99999999999999877655566666666


Q ss_pred             hhhh-cCCHHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          252 GKYV-IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       252 ~~~~-~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      +..+ +.+|||+|++++||+ ++.+.++||+.|. |+|..
T Consensus       224 pl~r~~~~peeva~~v~fL~-s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         224 PLGQSEASAAQIADAIAFLV-SKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             TTTSCCBCHHHHHHHHHHHH-SGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCCHHHHHHHHHHHh-CchhCCccCCeEEECccHh
Confidence            6644 479999999999999 7999999999888 66653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5e-36  Score=259.53  Aligned_cols=226  Identities=24%  Similarity=0.230  Sum_probs=183.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .|++|||||++|||+++|++|+++|++|++++|+++              +.+...+.+|+++...+..+..+..... .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEA-P   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhccc-c
Confidence            489999999999999999999999999999999853              4467889999999999999988887665 4


Q ss_pred             ccEEEEccccCCC------CcccCcccccchhhhhhhHHHHHHHHHHHHHhccc-ccCCCCCeEEEeCCcccccCCCCCC
Q 020927          109 LNILINNAGIMAT------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTA-RESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       109 id~lv~nag~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                      .+.++.++++...      ....+.+.|++.+++|+.+.+.+++.+++.+.... ..+++.|+||++||..+..+.|+  
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~--  143 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG--  143 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT--
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC--
Confidence            5666666665322      22345678899999999999999999999876542 12245789999999999986554  


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchh--HHHHHHHHhh-hhcCC
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISF--FSGLVGLLGK-YVIKN  258 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~-~~~~~  258 (319)
                                   +..|+++|+|+.+|+++|+.|++++|  ||||+|+||+++|++......  ........+. .++.+
T Consensus       144 -------------~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~  208 (241)
T d1uaya_         144 -------------QAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGR  208 (241)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCC
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcC
Confidence                         78999999999999999999999999  999999999999998776522  2222333332 66789


Q ss_pred             HHHHHHHHHHHhcCCCccCCCccccc-CCccc
Q 020927          259 VEQGAATTCYVALHPHVKGLTGSYFA-DSNVA  289 (319)
Q Consensus       259 ~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~~  289 (319)
                      |+|+|+.++||++   ++++||+.|. |+|..
T Consensus       209 pedvA~~v~fL~s---~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         209 PEEYAALVLHILE---NPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHHH---CTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHHHh---CCCCCCCEEEECCccc
Confidence            9999999999994   3689999988 55543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-36  Score=263.36  Aligned_cols=220  Identities=14%  Similarity=0.072  Sum_probs=180.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc--
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS--  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~--  105 (319)
                      +||+||||||++|||+++|++|+++|++|+++++++...            ......+.+|..+.++++.+..++.+.  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875321            335567788999999999888888664  


Q ss_pred             CCCccEEEEccccCCC---CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          106 GLPLNILINNAGIMAT---PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      .+++|+||||||....   ..+.+.+.|++.|++|+.+.+.+++.++|+|++       .|+||++||.++..+.|+   
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~~~~---  138 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDGTPG---  138 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTT---
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcCCccC---
Confidence            3579999999996543   224456889999999999999999999999965       579999999999886554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc--cCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK--EDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE  260 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  260 (319)
                                  +..|++||+|+.+|+++|+.|++  +.|  |+||+|+||+++|+|.+....      ......+.+|+
T Consensus       139 ------------~~~Y~asKaal~~lt~~la~El~~~~~g--I~vn~v~PG~v~T~~~~~~~~------~~~~~~~~~pe  198 (236)
T d1dhra_         139 ------------MIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMP------EADFSSWTPLE  198 (236)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHST------TSCGGGSEEHH
T ss_pred             ------------CcccHHHHHHHHHHHHHHHHHhccCCCc--EEEEEEEeccCcCCcchhhCc------cchhhcCCCHH
Confidence                        78999999999999999999998  457  999999999999998553211      11223456899


Q ss_pred             HHHHHHHHHhcCCCccCCCccccc---CCcccc
Q 020927          261 QGAATTCYVALHPHVKGLTGSYFA---DSNVAQ  290 (319)
Q Consensus       261 ~va~~i~~l~~s~~~~~~~G~~~~---~~g~~~  290 (319)
                      ++|+.+.+|+ ++....++|..+.   .+|...
T Consensus       199 ~va~~~~~l~-s~~~~~i~G~~i~v~~~~g~t~  230 (236)
T d1dhra_         199 FLVETFHDWI-TGNKRPNSGSLIQVVTTDGKTE  230 (236)
T ss_dssp             HHHHHHHHHH-TTTTCCCTTCEEEEEEETTEEE
T ss_pred             HHHHHHHHHh-CCCccCCCCCeEEEEEECCEEE
Confidence            9999999999 6888899997554   455443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=7.9e-36  Score=262.44  Aligned_cols=233  Identities=20%  Similarity=0.193  Sum_probs=183.0

Q ss_pred             CCCCCEEEEeCC--CCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGA--SSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGa--s~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+..+..+   .+.++. +.+...+++|+++++++..+++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhh
Confidence            489999999995  5799999999999999999999998865432   333333 5678889999999999999999987


Q ss_pred             hc---CCCccEEEEccccCCC-------CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          104 SS---GLPLNILINNAGIMAT-------PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       104 ~~---~~~id~lv~nag~~~~-------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      +.   ++.+|++|||+|+...       ..+.+.+.|...+.+|+.+.+...+...+.+..        +.+++++|...
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~  150 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFDP  150 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECCC
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc--------ccccccccccc
Confidence            64   5679999999997532       123556778888999999999888888766533        34555555555


Q ss_pred             ccCCCCCCcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc------------
Q 020927          174 QFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI------------  241 (319)
Q Consensus       174 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~------------  241 (319)
                      ..+.|               .+..|+++|+|+.+|+++++.+++++|  ||||+|+||+++|++...+            
T Consensus       151 ~~~~p---------------~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~  213 (268)
T d2h7ma1         151 SRAMP---------------AYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ  213 (268)
T ss_dssp             SSCCT---------------TTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHHH
T ss_pred             cccCc---------------ccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhhhhccchhhhhhccc
Confidence            55444               367899999999999999999999999  9999999999999976433            


Q ss_pred             --hhHHHHHHHHhhhh-cCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          242 --SFFSGLVGLLGKYV-IKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       242 --~~~~~~~~~~~~~~-~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                        .+.+.+.+..|..+ +.+|+|+|++++||+ |+.+.++||+.|. |+|.
T Consensus       214 ~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~-Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         214 IQLLEEGWDQRAPIGWNMKDATPVAKTVCALL-SDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHH-SSSCTTCCSEEEEESTTG
T ss_pred             hHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHh-CchhcCccCCEEEECcCc
Confidence              01112222334333 789999999999999 7999999999887 6665

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.5e-36  Score=259.98  Aligned_cols=217  Identities=13%  Similarity=0.043  Sum_probs=177.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh--cC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS--SG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~--~~  106 (319)
                      +++||||||++|||+++|++|+++|++|++++|+++..            ......+.+|..+.+......+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            45579999999999999999999999999999986421            23456677899988888887777766  56


Q ss_pred             CCccEEEEccccCCC--C-cccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          107 LPLNILINNAGIMAT--P-FMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~--~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                      ++||+||||||+...  . .+.+.+.|+.++++|+.+++.+++.++|+|++       .|+||++||..+..+.|+    
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~~~~~----  138 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGPTPS----  138 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSCCTT----
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcCCccc----
Confidence            899999999997543  2 23345779999999999999999999999965       579999999999986554    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHHH
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGA  263 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va  263 (319)
                                 +..|++||+|+++|+++|+.|++..+.+|+||+|+||+++|++.+..      ........+.+|++++
T Consensus       139 -----------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~------~~~~~~~~~~~~~~va  201 (235)
T d1ooea_         139 -----------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW------MPNADHSSWTPLSFIS  201 (235)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH------STTCCGGGCBCHHHHH
T ss_pred             -----------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhh------CcCCccccCCCHHHHH
Confidence                       78999999999999999999998644449999999999999976533      1112334567899999


Q ss_pred             HHHHHHhcCCCccCCCcccccC
Q 020927          264 ATTCYVALHPHVKGLTGSYFAD  285 (319)
Q Consensus       264 ~~i~~l~~s~~~~~~~G~~~~~  285 (319)
                      +.+++++.++....++|+.+..
T Consensus       202 ~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         202 EHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHhcCccccCCCceEEEE
Confidence            9999877678888999987753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=1.1e-31  Score=234.14  Aligned_cols=227  Identities=19%  Similarity=0.209  Sum_probs=162.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc-CCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS-GLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~-~~~  108 (319)
                      |+||||||++|||+++|++|+++|++|++++|+.++                   ..+|+.+.+..+....++..+ .+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999997421                   357999999998887766554 567


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC----c
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF----D  184 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~----~  184 (319)
                      +|++|+|||+..     ..+.+.....+|+.+...+.+...+.+.+.     ....+.++.+.............    .
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKG-----HQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-----SSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----ccCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999999742     235678888999999999999999988764     24455555554433211000000    0


Q ss_pred             --C------C-CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHH-
Q 020927          185 --R------I-NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGL-  250 (319)
Q Consensus       185 --~------~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~-  250 (319)
                        .      + .......+...|++||+|+++|+|+|+.|++++|  ||||+|+||+++|++.+...    ..+.+.+. 
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFV  210 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CC
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhhcCCHHHHHHHHhcC
Confidence              0      0 0000112345799999999999999999999999  99999999999999876541    11222222 


Q ss_pred             HhhhhcCCHHHHHHHHHHHhcCCCccCCCccccc-CCcc
Q 020927          251 LGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFA-DSNV  288 (319)
Q Consensus       251 ~~~~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~-~~g~  288 (319)
                      .|.+++.+|+|+|+.++||+ |+.++++||+.|. |+|.
T Consensus       211 ~PlgR~g~p~eva~~v~fL~-S~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         211 PPMGRRAEPSEMASVIAFLM-SPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHT-SGGGTTCCSCEEEESTTH
T ss_pred             CCCCCCcCHHHHHHHHHHHh-CchhCCccCceEEeCCCc
Confidence            46778889999999999999 7999999999888 6665

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=2.8e-29  Score=219.33  Aligned_cols=211  Identities=20%  Similarity=0.205  Sum_probs=160.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHH---HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMA---ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++|+|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++...  +.++.++.+|++++++++++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            56999999999999999999999998 6999999753   455666666554  67899999999999999999998866


Q ss_pred             cCCCccEEEEccccCCC--CcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          105 SGLPLNILINNAGIMAT--PFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                      . +++|++|||+|+...  ..+.+.+.|+..+++|+.+.+++.+.+.+    .     ..++||++||.++..+.|+   
T Consensus        87 ~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~-----~~~~iv~~SS~a~~~g~~~---  153 (259)
T d2fr1a1          87 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----L-----DLTAFVLFSSFASAFGAPG---  153 (259)
T ss_dssp             T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----S-----CCSEEEEEEEHHHHTCCTT---
T ss_pred             c-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----c-----CCceEeeecchhhccCCcc---
Confidence            4 589999999998765  34677889999999999999998775432    1     3679999999999986554   


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhhhhcCCHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQG  262 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~v  262 (319)
                                  +..|+++|++++.|++.    ++.+|  +++++|+||.+.+..+........ .+.. .....+|+++
T Consensus       154 ------------~~~YaAaka~l~~la~~----~~~~G--i~v~~I~pg~~~~~g~~~~~~~~~-~~~~-G~~~~~~~~~  213 (259)
T d2fr1a1         154 ------------LGGYAPGNAYLDGLAQQ----RRSDG--LPATAVAWGTWAGSGMAEGPVADR-FRRH-GVIEMPPETA  213 (259)
T ss_dssp             ------------CTTTHHHHHHHHHHHHH----HHHTT--CCCEEEEECCBC-------------CTTT-TEECBCHHHH
T ss_pred             ------------cHHHHHHHHhHHHHHHH----HHhCC--CCEEECCCCcccCCccccchHHHH-HHhc-CCCCCCHHHH
Confidence                        78999999998876654    55678  999999999987553322211111 1111 1123589999


Q ss_pred             HHHHHHHhcCCC
Q 020927          263 AATTCYVALHPH  274 (319)
Q Consensus       263 a~~i~~l~~s~~  274 (319)
                      ++.+..++..+.
T Consensus       214 ~~~l~~~l~~~~  225 (259)
T d2fr1a1         214 CRALQNALDRAE  225 (259)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCC
Confidence            999999986443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=4.1e-19  Score=161.18  Aligned_cols=221  Identities=14%  Similarity=0.057  Sum_probs=151.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHh--hCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR-EVKKAIVK--EIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .|+||||||||.||..++++|+++|++|++++|...... ...+.+..  .....++.++.+|++|.+++.++++.+   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999999998543221 11111111  111457999999999999999999876   


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR  185 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~  185 (319)
                        .+|+++|+|+.....  .+.++....+++|+.|+.++++++...-.+      +..++|++||...+.. |..   ..
T Consensus        78 --~~d~v~h~aa~~~~~--~~~~~~~~~~~~Nv~gt~nllea~~~~~~~------~~~r~i~~SS~~vYG~-~~~---~~  143 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLE------KKTRFYQASTSELYGL-VQE---IP  143 (357)
T ss_dssp             --CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGGTT-CCS---SS
T ss_pred             --CCCEEEEeecccccc--hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEEchhhhCC-CCC---CC
Confidence              799999999986543  233566778999999999999988654322      2458999999765532 222   23


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHh----------
Q 020927          186 INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLG----------  252 (319)
Q Consensus       186 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~----------  252 (319)
                      ++++....+...|+.||.+.+.+++.+++.+   +  +.+..+.|+.+-+|......   ..........          
T Consensus       144 ~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~--l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g  218 (357)
T d1db3a_         144 QKETTPFYPRSPYAVAKLYAYWITVNYRESY---G--MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG  218 (357)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEEC
Confidence            4455556677889999999999999888775   3  66667888888776432221   1111111111          


Q ss_pred             ----hhhcCCHHHHHHHHHHHhc
Q 020927          253 ----KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ----~~~~~~~~~va~~i~~l~~  271 (319)
                          ..-+..++|++++++.++.
T Consensus       219 ~~~~~r~~~~v~D~~~a~~~~~~  241 (357)
T d1db3a_         219 NMDSLRDWGHAKDYVKMQWMMLQ  241 (357)
T ss_dssp             CTTCEECCEEHHHHHHHHHHTTS
T ss_pred             CCCeeecceeechHHHHHHHHHh
Confidence                0113568999999988874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.79  E-value=9.2e-21  Score=157.31  Aligned_cols=156  Identities=13%  Similarity=0.060  Sum_probs=115.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ...+|+||++|||||++|||+++++.|+++|++|++++|+.++++++.+.+...   .++....+|+++.+++++++   
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~---   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAV---   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHT---
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc---cchhhhhhhcccHHHHHHHh---
Confidence            467899999999999999999999999999999999999999999988888764   34567889999999887765   


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                          +++|+||||||+..  ...+.+.|+..+.+|+.+.++....+.+.+...      ......+++.....+..    
T Consensus        91 ----~~iDilin~Ag~g~--~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~----  154 (191)
T d1luaa1          91 ----KGAHFVFTAGAIGL--ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA------TDKGKEYGGKRAFGALG----  154 (191)
T ss_dssp             ----TTCSEEEECCCTTC--CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT------TCEEEEETTEEEECHHH----
T ss_pred             ----cCcCeeeecCcccc--ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh------ccCcEEecceEEEeccC----
Confidence                47899999999743  345778899999999888776654443322221      12333333333332100    


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHH
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTS  210 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  210 (319)
                                .+...|+++|+++..+++
T Consensus       155 ----------~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         155 ----------IGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             ----------HHHHHHHHHHHHHHHHTS
T ss_pred             ----------cCcHHHHHHHHHHHHHHh
Confidence                      013469999999887653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.76  E-value=1.6e-17  Score=149.62  Aligned_cols=225  Identities=16%  Similarity=0.102  Sum_probs=154.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+||+||||||+|.||..++++|+++|++|+.+.|+.++...+...............+..|+.+.+++.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            46999999999999999999999999999999999988777665554444445556678899999987766554      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC-CCCC--CcC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS-YPEG--IRF  183 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~-~p~~--~~~  183 (319)
                       .+|+++|+++.....     ......+..|+.++.++++.+...-        .-.++|++||..+... .|..  ...
T Consensus        83 -~~~~v~~~a~~~~~~-----~~~~~~~~~nv~gt~~ll~~~~~~~--------~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAATP--------SVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             -TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTCT--------TCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             -cchhhhhhccccccc-----ccccccccchhhhHHHHHHhhhccc--------ccccccccccceeeccCCCCCCCccc
Confidence             789999999964321     2345667889999998888875431        2459999999765432 1111  000


Q ss_pred             c-------------CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc---hhHHHH
Q 020927          184 D-------------RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI---SFFSGL  247 (319)
Q Consensus       184 ~-------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~---~~~~~~  247 (319)
                      +             ...+.....+...|+.+|.+.+.+++.+++... .+  +++.+++|+.+-.+.....   .....+
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~--~~~~~i~p~~v~Gp~~~~~~~~~~~~~~  225 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PH--FTLNAVLPNYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CS--SEEEEEEESEEECCCSCTTTCCCHHHHH
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cc--cccceecccceeCCCCCccccccchHHH
Confidence            0             012233334456799999999999998888764 33  7778888988766543211   122222


Q ss_pred             HHHHhh------------hhcCCHHHHHHHHHHHhcCCC
Q 020927          248 VGLLGK------------YVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       248 ~~~~~~------------~~~~~~~~va~~i~~l~~s~~  274 (319)
                      ...+..            ..+..++|+|++++.++..+.
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~  264 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ  264 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc
Confidence            222111            114578999999888875443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=8.3e-18  Score=151.69  Aligned_cols=184  Identities=20%  Similarity=0.143  Sum_probs=132.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|+||||||+|.||..++++|+++|++|+++++.... .......-...  ..++.++.+|+++.++++.++...     
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~-----   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEY-----   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc--ccCCeEEEeecCCHHHHHHHHhcc-----
Confidence            3789999999999999999999999999998752111 11111111111  457899999999999999988764     


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCC
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIN  187 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~  187 (319)
                      ++|++||+|+......  ..+.-...+.+|+.++.++++++...-         ..++|++||...+...+...+...+.
T Consensus        74 ~~d~VihlAa~~~~~~--~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vyg~~~~~~~~~~~~  142 (347)
T d1z45a2          74 KIDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVYGDATRFPNMIPIP  142 (347)
T ss_dssp             CCCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             CCCEEEEccccccccc--cccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeeecCcccCCCCCccc
Confidence            7999999999753322  223446778899999999999986542         34899999988776544444444556


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcc
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAI  233 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v  233 (319)
                      +.....+...|+.||.+.+.+++.+..... .+  +.+..+.|+.+
T Consensus       143 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~--~~~~~lR~~~v  185 (347)
T d1z45a2         143 EECPLGPTNPYGHTKYAIENILNDLYNSDK-KS--WKFAILRYFNP  185 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHST-TS--CEEEEEEECEE
T ss_pred             cccCCCCCChhHhHHHHHHHHHHHHHHhhc-cC--CcEEEEeecce
Confidence            666666778899999999999888776543 23  45555554433

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=1.5e-16  Score=145.77  Aligned_cols=190  Identities=14%  Similarity=0.102  Sum_probs=131.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH----------------HHHHHHHHHHhhCCCCceEEEEcCCCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA----------------ACREVKKAIVKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~----------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   92 (319)
                      ||+||||||+|.||.+++++|+++|++|++++.-..                ...+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            789999999999999999999999999999862111                0111111111111 45799999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCc-ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMATPF-MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      +.++++++..     ++|+|||.|+...... ..+.+.....+.+|+.|+.++++.+...-.        ..++++.||.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~  146 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTM  146 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCG
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeecccc
Confidence            9999999876     8999999999754422 233455667889999999999998876532        3467777776


Q ss_pred             ccccCCCCCCcCc--CC-------CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          172 RHQFSYPEGIRFD--RI-------NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       172 ~~~~~~p~~~~~~--~~-------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      ..+.......+..  ..       .......+...|+.||.+.+.+++.+++++.     +.+..+.|+.+-.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCCC
Confidence            6554322211110  00       0112234456799999999999988877653     777778887776653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.73  E-value=1.1e-17  Score=152.05  Aligned_cols=229  Identities=13%  Similarity=0.084  Sum_probs=155.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +||||||+|.||.+++++|+++|++ |+++++......  ...+.......++.++.+|++|.+.+..+++..     ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            6999999999999999999999996 444554211100  011112222457999999999999999998876     79


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc-----
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD-----  184 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~-----  184 (319)
                      |++||+|+.....  .+.++....+++|+.++.++++.+...............++|++||...+...+.....+     
T Consensus        75 d~VihlAa~~~~~--~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (361)
T d1kewa_          75 DAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCHH--HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECccccchh--hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence            9999999964332  223455678999999999999999886543110011245899999988776433221111     


Q ss_pred             -CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh----------
Q 020927          185 -RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK----------  253 (319)
Q Consensus       185 -~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----------  253 (319)
                       ...+.+...+...|+.||.+.+.+++.++..+   +  +.+.++.|+.+-.|....-.+...+......          
T Consensus       153 ~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~--i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g  227 (361)
T d1kewa_         153 PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCC
Confidence             11234445567789999999999999988766   3  7777888988877654322222333322111          


Q ss_pred             ---hhcCCHHHHHHHHHHHhcCC
Q 020927          254 ---YVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       254 ---~~~~~~~~va~~i~~l~~s~  273 (319)
                         +-+..++|+|+++..++.++
T Consensus       228 ~~~r~~i~v~D~a~ai~~~~~~~  250 (361)
T d1kewa_         228 DQIRDWLYVEDHARALHMVVTEG  250 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             CeEEeCEEHHHHHHHHHHHHhcC
Confidence               11347899999999998643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.9e-17  Score=144.47  Aligned_cols=221  Identities=14%  Similarity=0.032  Sum_probs=149.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA-----CREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |+||||||+|.||..++++|+++|++|+.++|..+.     ++....... .....++.++.+|+++.+.+..++...  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQ-AHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchh-hhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            344999999999999999999999999999985421     111111111 111357899999999999999999876  


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         .+++++|+++.....  ...+.....+++|+.++.+++.++......      +..++|++||.+-+...+.    .
T Consensus        79 ---~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~------~~~~~i~~SS~~vyg~~~~----~  143 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLI------NSVKFYQASTSELYGKVQE----I  143 (347)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT------TTCEEEEEEEGGGTCSCSS----S
T ss_pred             ---ccceeeeeeeccccc--hhhccchhhhhhHHHHHHHHHHHHHHcCCC------CCcEEEEecchheecCCCC----C
Confidence               788999999864322  223445667899999999999888665332      2458999998765543221    2


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch----hHHHHHHHHh--------
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS----FFSGLVGLLG--------  252 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~--------  252 (319)
                      .++++....+...|+.||.+.+.+++.+++.+   +  +.+..+.|+.+-.+......    ....+.....        
T Consensus       144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~--~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~  218 (347)
T d1t2aa_         144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---N--LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL  218 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEE
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeec
Confidence            34455566677889999999999998887765   3  66666888777665322221    1111111110        


Q ss_pred             -----hhhcCCHHHHHHHHHHHhcCC
Q 020927          253 -----KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       253 -----~~~~~~~~~va~~i~~l~~s~  273 (319)
                           .+-+..++|+++++..++...
T Consensus       219 g~g~~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         219 GNLDAKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             SCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCCcceeeeeEecHHHHHHHHHhhcC
Confidence                 112357899999999998644

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=3.5e-17  Score=147.02  Aligned_cols=182  Identities=19%  Similarity=0.116  Sum_probs=130.8

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .||||||+|.||..+++.|+++|++|++++|-............... ..++.++++|+++.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            59999999999999999999999999999762211111111111111 457999999999999999888864     799


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      ++||.|+.....  .+.++..+.+++|+.|+.++++++...-         -.++|++||...+...+...   ..+...
T Consensus        76 ~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~~~---~~e~~~  141 (338)
T d1udca_          76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPKIP---YVESFP  141 (338)
T ss_dssp             EEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCSSS---BCTTSC
T ss_pred             EEEECCCccchh--hHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEccccccc---cccccc
Confidence            999999964322  2334556889999999999999887652         34899999988765443321   122333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          191 GYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                      ...+...|+.+|.+.+.+++....+..  +  +.+..+.|+.+-++
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~  183 (338)
T d1udca_         142 TGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGA  183 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECC
T ss_pred             cCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEec
Confidence            445677899999999999887776643  3  56666777766554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=2.3e-16  Score=140.22  Aligned_cols=219  Identities=16%  Similarity=0.062  Sum_probs=149.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+.......++.++.+|+++.+.+.+++...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998643211  111222222457999999999999999988876     67


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      ++++|+++.....  ...+.....+++|+.++.+++.++...-.        ..++++.||.. +.+...   ....+++
T Consensus        74 ~~~~~~a~~~~~~--~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss~~-~~~~~~---~~~~~E~  139 (321)
T d1rpna_          74 QEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTSE-MFGLIQ---AERQDEN  139 (321)
T ss_dssp             SEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEGG-GGCSCS---SSSBCTT
T ss_pred             ccccccccccccc--ccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccchh-hcCccc---CCCCCCC
Confidence            8888888754322  22345678899999999999988866532        33666666644 432222   2223455


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch---hHHHHHHHHh--------------
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS---FFSGLVGLLG--------------  252 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~--------------  252 (319)
                      ....+...|+.+|.+.+.+++.++.++.     +.+..+.|+.+-.|......   ..........              
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~  214 (321)
T d1rpna_         140 TPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDA  214 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred             CCccccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCe
Confidence            5666778999999999999988887754     56666778776665432221   1111111110              


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCC
Q 020927          253 KYVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~  274 (319)
                      ...+..++|+|++++.++..+.
T Consensus       215 ~r~~i~v~D~~~~~~~~~~~~~  236 (321)
T d1rpna_         215 KRDWGFAGDYVEAMWLMLQQDK  236 (321)
T ss_dssp             EEECEEHHHHHHHHHHHHHSSS
T ss_pred             EEccEEeHHHHHHHHHHHhcCC
Confidence            0124578999999999986554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=7.5e-16  Score=137.78  Aligned_cols=224  Identities=13%  Similarity=0.040  Sum_probs=150.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-----ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|+||||||||.||+.++++|+++|++|+.++|..+     ........... .....+.++.+|+++.+++...++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh-
Confidence            389999999999999999999999999999998432     11111111111 11356889999999999999988865 


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF  183 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~  183 (319)
                          ++|++||+|+.....  ...+.....+.+|+.+...+..++.......    ....+++..||.......+.    
T Consensus        79 ----~~D~Vih~Aa~~~~~--~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~~~~ss~~~~~~~~~----  144 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDS----GRTVKYYQAGSSEMFGSTPP----  144 (339)
T ss_dssp             ----CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH----CCCCEEEEEEEGGGGTTSCS----
T ss_pred             ----ccchhhhcccccccc--ccccCccccccccccccchhhhhhhhccccc----ccceeeeecccceecccCCC----
Confidence                899999999964332  2234566788999999999988887655432    12345565555544333222    


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH---HHh--------
Q 020927          184 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG---LLG--------  252 (319)
Q Consensus       184 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~--------  252 (319)
                       .+.+.....+...|+.+|.+.+.++..+.+.+   +  +.+..+.|+.+-.|..........+..   ...        
T Consensus       145 -~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~  218 (339)
T d1n7ha_         145 -PQSETTPFHPRSPYAASKCAAHWYTVNYREAY---G--LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF  218 (339)
T ss_dssp             -SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred             -CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---C--CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEE
Confidence             23344456677899999999999998887765   4  777888998887764332211111111   100        


Q ss_pred             ------hhhcCCHHHHHHHHHHHhcCCC
Q 020927          253 ------KYVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       253 ------~~~~~~~~~va~~i~~l~~s~~  274 (319)
                            ..-+..++|+++.+..++..+.
T Consensus       219 ~g~~~~~rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         219 LGNLQASRDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             ESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             eCCCCccccceeeehHHHHHHHHHhcCC
Confidence                  1113468999999999986544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.4e-16  Score=132.97  Aligned_cols=192  Identities=14%  Similarity=0.039  Sum_probs=125.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      |..|+|+||||||+||++++++|+++|++|.++.|+++++...        ....+.++.+|+++.+++.+++.      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4568899999999999999999999999999999998764321        14568899999999999888766      


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       ..|++|+++|......         ...++..+..++++++    +++     .-.++|++||.......+.       
T Consensus        67 -~~d~vi~~~g~~~~~~---------~~~~~~~~~~~l~~aa----~~~-----~v~r~i~~ss~~~~~~~~~-------  120 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDLS---------PTTVMSEGARNIVAAM----KAH-----GVDKVVACTSAFLLWDPTK-------  120 (205)
T ss_dssp             -TCSEEEECCCCTTCCS---------CCCHHHHHHHHHHHHH----HHH-----TCCEEEEECCGGGTSCTTC-------
T ss_pred             -CCCEEEEEeccCCchh---------hhhhhHHHHHHHHHHH----Hhc-----CCCeEEEEeeeeccCCCcc-------
Confidence             6899999999643211         1234445555555444    333     2459999999776543221       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc-hhHHHHHHHHhhhhcCCHHHHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI-SFFSGLVGLLGKYVIKNVEQGAAT  265 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~  265 (319)
                          .......|...|.+.+.+       +...|  +....|.||.+...-.... ....   .......+.+.+|+|+.
T Consensus       121 ----~~~~~~~~~~~~~~~e~~-------l~~~~--~~~tiirp~~~~~~~~~~~~~~~~---~~~~~~~~i~~~DvA~~  184 (205)
T d1hdoa_         121 ----VPPRLQAVTDDHIRMHKV-------LRESG--LKYVAVMPPHIGDQPLTGAYTVTL---DGRGPSRVISKHDLGHF  184 (205)
T ss_dssp             ----SCGGGHHHHHHHHHHHHH-------HHHTC--SEEEEECCSEEECCCCCSCCEEES---SSCSSCSEEEHHHHHHH
T ss_pred             ----ccccccccchHHHHHHHH-------HHhcC--CceEEEecceecCCCCcccEEEee---CCCCCCCcCCHHHHHHH
Confidence                111223455555554433       23456  8888899998854322211 0000   01112234588999999


Q ss_pred             HHHHhcCCC
Q 020927          266 TCYVALHPH  274 (319)
Q Consensus       266 i~~l~~s~~  274 (319)
                      ++.++.+++
T Consensus       185 ~~~~l~~~~  193 (205)
T d1hdoa_         185 MLRCLTTDE  193 (205)
T ss_dssp             HHHTTSCST
T ss_pred             HHHHhCCCC
Confidence            999996443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.65  E-value=2.4e-15  Score=134.86  Aligned_cols=219  Identities=14%  Similarity=0.069  Sum_probs=149.7

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR----NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..+.|++|||||||.||.+++++|.++|++|+.++|    +........ .+.......++.++.+|+.+......... 
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-   90 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR-SLVSEKQWSNFKFIQGDIRNLDDCNNACA-   90 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-HhhhhcccCCeeEEeeccccccccccccc-
Confidence            346789999999999999999999999999999986    222222221 11111112468999999999887655433 


Q ss_pred             HHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGI  181 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~  181 (319)
                            .++.++|.++.....  .+.+.....+.+|+.|+.++++++...-         ..++|++||...+...+.. 
T Consensus        91 ------~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---------~~~~i~~SS~~vyg~~~~~-  152 (341)
T d1sb8a_          91 ------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDAK---------VQSFTYAASSSTYGDHPGL-  152 (341)
T ss_dssp             ------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHTT---------CSEEEEEEEGGGGTTCCCS-
T ss_pred             ------ccccccccccccccc--ccccCccchhheeehhHHHHHHHHHhcC---------CceEEEcccceeeCCCCCC-
Confidence                  678888888754322  2346677899999999999999886532         4499999998877644332 


Q ss_pred             cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHHh-----
Q 020927          182 RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLLG-----  252 (319)
Q Consensus       182 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-----  252 (319)
                         .++++....+...|+.+|.+.+.+++.+++...     +++..+.|+.+-++.....    .....+.....     
T Consensus       153 ---~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i  224 (341)
T d1sb8a_         153 ---PKVEDTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDV  224 (341)
T ss_dssp             ---SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCC
T ss_pred             ---CccCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCce
Confidence               244455566778999999999999988887663     5566677877765532211    11222222111     


Q ss_pred             --------hhhcCCHHHHHHHHHHHhcC
Q 020927          253 --------KYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       253 --------~~~~~~~~~va~~i~~l~~s  272 (319)
                              ...+..++|++.++..++..
T Consensus       225 ~~~g~g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         225 YINGDGETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             EEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             EEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence                    11234668999998888743

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.63  E-value=1.1e-15  Score=137.42  Aligned_cols=218  Identities=17%  Similarity=0.124  Sum_probs=146.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCE--EEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVH--VVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~--Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      -|.||||||||.||..++++|+++|+.  |+..+.. ......   .+ ......++.++.+|+++.+.+..++.     
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~---~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-----   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA---NL-EAILGDRVELVVGDIADAELVDKLAA-----   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GT-GGGCSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH---HH-HHhhcCCeEEEEccCCCHHHHHHHHh-----
Confidence            378999999999999999999999975  4444321 100000   00 11124689999999999999888765     


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc---
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR---  182 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~---  182 (319)
                        ..+.++|.|+......  ...+..+.+++|+.++.+++..+...          ..++|++||...+...|....   
T Consensus        73 --~~~~v~~~a~~~~~~~--~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~  138 (346)
T d1oc2a_          73 --KADAIVHYAAESHNDN--SLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPG  138 (346)
T ss_dssp             --TCSEEEECCSCCCHHH--HHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             --hhhhhhhhhhcccccc--hhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCccccccc
Confidence              6788999998754421  12345678999999999999877544          347888888776653322111   


Q ss_pred             -----CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHh-----
Q 020927          183 -----FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLG-----  252 (319)
Q Consensus       183 -----~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-----  252 (319)
                           ...+.+.....+...|+.+|.+.+.+++.+.+++   +  +++.++.|+.+-.|..........+.....     
T Consensus       139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~  213 (346)
T d1oc2a_         139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKP  213 (346)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCC
T ss_pred             cccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCCccchhHHHHHHHHcCCce
Confidence                 1234455566667789999999999998888765   4  888889999888764332222222222111     


Q ss_pred             --------hhhcCCHHHHHHHHHHHhcCCC
Q 020927          253 --------KYVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       253 --------~~~~~~~~~va~~i~~l~~s~~  274 (319)
                              .+.+...+|++++++.++..+.
T Consensus       214 ~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~  243 (346)
T d1oc2a_         214 KLYGEGKNVRDWIHTNDHSTGVWAILTKGR  243 (346)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHCC
T ss_pred             eEeCCCCccccccchhhHHHHHHHHHhhcc
Confidence                    1123467899999988875443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=7.3e-15  Score=131.60  Aligned_cols=213  Identities=11%  Similarity=0.017  Sum_probs=142.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +||||||+|.||+.++++|+++| .+|+++++..+......       ...++.++.+|+++.+++.+.+.+      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CC
Confidence            59999999999999999999999 48999987654322211       145799999999998776654332      58


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc---CC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD---RI  186 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~---~~  186 (319)
                      |++||+|+......  ..+.....+.+|+.++.++++.+...          +.+++++||...+...+....-.   ..
T Consensus        69 d~Vih~a~~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~~~~~~~  136 (342)
T d2blla1          69 DVVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKYFDEDHSNL  136 (342)
T ss_dssp             SEEEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred             Cccccccccccccc--cccCCccccccccccccccccccccc----------cccccccccccccccccccccccccccc
Confidence            99999999754321  22344577999999999999987542          34777888877665433322111   11


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--------hhHHHHHHHHh------
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--------SFFSGLVGLLG------  252 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~------  252 (319)
                      .......+...|+.||.+.+.+++.+++.+.     +.+..+.|..+-.+.....        .....+.....      
T Consensus       137 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  211 (342)
T d2blla1         137 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG-----LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  211 (342)
T ss_dssp             BCCCTTCGGGHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEE
T ss_pred             cccccCCCcchhhhcccchhhhhhhhhcccC-----ceeEEeeccccccccccccccccccccccchHHHHHHHhCCCcc
Confidence            1222333456899999999999998888763     5566676766655432211        11222222111      


Q ss_pred             -------hhhcCCHHHHHHHHHHHhcCC
Q 020927          253 -------KYVIKNVEQGAATTCYVALHP  273 (319)
Q Consensus       253 -------~~~~~~~~~va~~i~~l~~s~  273 (319)
                             .+-+...+|+++++..++..+
T Consensus       212 ~~~~g~~~r~~i~v~D~~~a~~~~~~~~  239 (342)
T d2blla1         212 LIDGGKQKRCFTDIRDGIEALYRIIENA  239 (342)
T ss_dssp             EGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             ccCCCCeeeeecccccccceeeeehhhc
Confidence                   112457899999999999643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.62  E-value=7.3e-15  Score=130.78  Aligned_cols=170  Identities=16%  Similarity=0.175  Sum_probs=121.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC-HHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRN-MAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      .||||||+|.||+.++++|+++|++|+.+++- ..........+..   ..++.++.+|+++.+++.++++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            58999999999999999999999999998741 1111122222222   457899999999999999998876     78


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcC------
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRF------  183 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~------  183 (319)
                      |++||+|+.....  ...++....+++|+.|+.++++++...-         ..+.|+.+|.......+.....      
T Consensus        74 d~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            9999999975332  2234567889999999999998876542         3355666665555443332211      


Q ss_pred             -------cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccC
Q 020927          184 -------DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED  219 (319)
Q Consensus       184 -------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  219 (319)
                             ......+...+...|+.+|...+.+.......+...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~  185 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLN  185 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccCcc
Confidence                   112334445567789999999999998888877543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.61  E-value=3.7e-15  Score=134.08  Aligned_cols=188  Identities=17%  Similarity=0.112  Sum_probs=136.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+||+||||||+|.||..++++|+++|++|++++|+........+....   ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            4789999999999999999999999999999999976544333322211   346999999999999999988876    


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                       .+|+++|.|+.....  .+.+.....+.+|+.++.++++++...-        ....+++.|+.......+.   ....
T Consensus        79 -~~~~v~~~aa~~~~~--~~~~~~~~~~~~Nv~g~~n~l~~~~~~~--------~~~~~~~~s~~~~~~~~~~---~~~~  144 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLVR--LSYSEPVETYSTNVMGTVYLLEAIRHVG--------GVKAVVNITSDKCYDNKEW---IWGY  144 (356)
T ss_dssp             -CCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEECCGGGBCCCCS---SSCB
T ss_pred             -hhhhhhhhhcccccc--ccccCCccccccccccchhhhhhhhccc--------ccccccccccccccccccc---cccc
Confidence             899999999964332  2335567789999999999998887642        1335565555544432221   1122


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcc------CCCcEEEEEeeCCcccCCc
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKE------DGVDITANSVHPGAITTNL  237 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~------~g~~i~v~~v~PG~v~t~~  237 (319)
                      .......+...|+.+|.+.+.+++.++.++..      .+  +.+..+.|+.+-.+.
T Consensus       145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGG  199 (356)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTT
T ss_pred             ccccccCCCCccccccccchhhhhHHhhhcccchhccccC--ceEEeccCCCeeCCC
Confidence            33334455678999999999999888876543      24  677788888776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7.6e-15  Score=131.76  Aligned_cols=184  Identities=17%  Similarity=0.076  Sum_probs=125.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC------CHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVR------NMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .|+||||||+|.||.+++++|+++|++|+.+++      +........+.+... ...++.++.+|++|.+.+.+++...
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeecccccccccccccc
Confidence            378999999999999999999999999999863      111111111111111 1568999999999999998887753


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIR  182 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~  182 (319)
                           .+++++|.|+.....  .+.+...+.+++|+.++.+++.++...-         -.++|++||...+...+....
T Consensus        81 -----~~~~i~h~Aa~~~~~--~~~~~p~~~~~~Nv~gt~~l~~~~~~~~---------v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKAHG---------VKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCSCSSSSB
T ss_pred             -----ccccccccccccCcH--hhHhCHHHHHHhhhcccccccchhhhcC---------cccccccccceeeeccccccc
Confidence                 789999999975432  2223456789999999999888875432         348999988877754332211


Q ss_pred             CcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          183 FDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       183 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                         ........+...|+.+|.+.+..++.+++..  .+  +....+.|+.+-++
T Consensus       145 ---~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         145 ---DEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KT--WNAVLLRYFNPTGA  191 (346)
T ss_dssp             ---CTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TT--CEEEEEEECEEECC
T ss_pred             ---cccccccccCChHHHHHHHHHHHHHHHHHhc--cC--CceEEEeecceecc
Confidence               1111122344579999999998887766542  34  55666667655443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=4e-15  Score=131.74  Aligned_cols=167  Identities=13%  Similarity=0.079  Sum_probs=123.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .|.||||||+|.||++|+++|+++|+.|+++++..                      .+|+.+.+.+..++...     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----C
Confidence            47899999999999999999999999888776432                      16999999998887754     7


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC-CcCcCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG-IRFDRIN  187 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~-~~~~~~~  187 (319)
                      +|.++|+|+...... .......+.+++|+.++.++++++...-         -.++|++||.+.+...... .+.+...
T Consensus        55 ~d~v~~~a~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------v~~~i~~SS~~vyg~~~~~~~~E~~~~  124 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIV-ANNTYPADFIYQNMMIESNIIHAAHQND---------VNKLLFLGSSCIYPKLAKQPMAESELL  124 (315)
T ss_dssp             CSEEEECCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CCEEEEcchhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEECCceEcCCCCCCCccCCccc
Confidence            899999998654321 2234456678899999999988886532         3489999998887643321 1222222


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      ......+...|+.||.+.+.+++.+.++.   |  +.+..+.|+.+-.+.
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPH  169 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTT
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCC
Confidence            22333334579999999999999988766   4  788889998887653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.6e-15  Score=131.06  Aligned_cols=209  Identities=12%  Similarity=0.042  Sum_probs=138.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA-ACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      |+||||||+|.||++++++|+++|++|+++++... ..+..    .......++.....|+.+.            .+.+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT----GGGTTCTTEEEEECCTTSC------------CCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH----HHhcCCCceEEEehHHHHH------------HHcC
Confidence            78999999999999999999999999999986321 11111    1111133566666665432            2337


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCC-CCcCcCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPE-GIRFDRIN  187 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~-~~~~~~~~  187 (319)
                      +|++||+|+.....  ...++..+.+++|+.++.++++++...          ..++|++||.+.+..... ..+.+...
T Consensus        66 ~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~g~~~ll~~~~~~----------~~k~I~~SS~~vy~~~~~~~~~e~~~~  133 (312)
T d2b69a1          66 VDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGDPEVHPQSEDYWG  133 (312)
T ss_dssp             CSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             CCEEEECcccCCch--hHHhCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEEChheecCCCCCCCCccccC
Confidence            99999999965432  122455678999999999999877542          238999999776653211 11122233


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhHHHHHHHHh-------------
Q 020927          188 DQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFFSGLVGLLG-------------  252 (319)
Q Consensus       188 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-------------  252 (319)
                      ..+...+...|+.||.+.+.+++.+++.+   |  +.+..+.|+.+-.+.....  .+...+.....             
T Consensus       134 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~  208 (312)
T d2b69a1         134 HVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ  208 (312)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCe
Confidence            44455667889999999999999888876   4  7788889998887643221  22223322211             


Q ss_pred             hhhcCCHHHHHHHHHHHhc
Q 020927          253 KYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~  271 (319)
                      ..-+...+|++++++.++.
T Consensus       209 ~r~~i~v~D~~~~~~~~~~  227 (312)
T d2b69a1         209 TRAFQYVSDLVNGLVALMN  227 (312)
T ss_dssp             EEECEEHHHHHHHHHHHHT
T ss_pred             eEccEEHHHHHHHHHHHHh
Confidence            1123467999999988884

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.59  E-value=6.6e-15  Score=130.97  Aligned_cols=215  Identities=15%  Similarity=0.086  Sum_probs=148.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCE------EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARVLALRGVH------VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~------Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +||||||+|.||..++++|+++|+.      |+..+.-......  ..+.......++.++.+|+++.........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhcccc----
Confidence            6999999999999999999999864      4444421100000  011111125679999999999887665433    


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                         .+|.++|.|+.....  .......+.+++|+.++.++++++...         +..++|++||.+.+...+.    .
T Consensus        76 ---~~d~vi~~a~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~---------~~~~~I~~Ss~~~yg~~~~----~  137 (322)
T d1r6da_          76 ---GVDAIVHFAAESHVD--RSIAGASVFTETNVQGTQTLLQCAVDA---------GVGRVVHVSTNQVYGSIDS----G  137 (322)
T ss_dssp             ---TCCEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEEEEGGGGCCCSS----S
T ss_pred             ---ccceEEeeccccccc--ccccchHHHhhhhHHHHHHHHHHHHHc---------CCceEEEeecceeecCCCC----C
Confidence               789999999864332  233566778899999999999988643         2458999999887764332    2


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------  253 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------  253 (319)
                      .+++.....+...|+.+|.+.+.+++.+++++   +  +.+..+.|+.+-.+......+...+......           
T Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~  212 (322)
T d1r6da_         138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA  212 (322)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCC
Confidence            34555566677899999999999999988765   4  7788899998877643322233333332111           


Q ss_pred             --hhcCCHHHHHHHHHHHhcCCC
Q 020927          254 --YVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       254 --~~~~~~~~va~~i~~l~~s~~  274 (319)
                        .-+...+|+|+++..++..+.
T Consensus       213 ~~r~~i~v~D~a~ai~~~~~~~~  235 (322)
T d1r6da_         213 NVREWVHTDDHCRGIALVLAGGR  235 (322)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             eEEccEEHHHHHHHHHHHHhCCC
Confidence              113478999999999996433

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=8.3e-15  Score=132.37  Aligned_cols=215  Identities=14%  Similarity=0.013  Sum_probs=145.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +++.||||||+|.||..|+++|.++|++|+++++......      ...  .....+..+|+.+.+.+.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            6788999999999999999999999999999986432210      000  2245778899999887766554       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcC--
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDR--  185 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~--  185 (319)
                      ++|.+||.|+...... ...+.....+.+|+.++.+++.++...-         -.++|++||...+...+....-++  
T Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~~~~~~~~~~  148 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFKQLETTNVSL  148 (363)
T ss_dssp             TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred             cCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhhC---------cccccccccccccccccccccccccc
Confidence            7899999998754421 2345677888999999999998886642         349999999887754332111000  


Q ss_pred             -CCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhH-HHHHHHH--------
Q 020927          186 -INDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFF-SGLVGLL--------  251 (319)
Q Consensus       186 -~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~-~~~~~~~--------  251 (319)
                       ........+...|+.+|.+.+.+++.+.+++   |  +.+..+.|+.+-.+.....    ... .......        
T Consensus       149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (363)
T d2c5aa1         149 KESDAWPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM  223 (363)
T ss_dssp             CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEE
T ss_pred             ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEeccCCcccccccccccccccccccccccccc
Confidence             1122233445689999999999998888766   4  7778888888876532211    111 1111110        


Q ss_pred             -----hhhhcCCHHHHHHHHHHHhcC
Q 020927          252 -----GKYVIKNVEQGAATTCYVALH  272 (319)
Q Consensus       252 -----~~~~~~~~~~va~~i~~l~~s  272 (319)
                           ..+-+...+|+++.++.++.+
T Consensus       224 ~g~g~~~rd~i~v~D~~~~~~~~~~~  249 (363)
T d2c5aa1         224 WGDGLQTRSFTFIDECVEGVLRLTKS  249 (363)
T ss_dssp             ESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             cCCCCeEEEEeehhHHHHHHHHHHhC
Confidence                 011245678999999988853

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.5e-15  Score=127.71  Aligned_cols=197  Identities=16%  Similarity=0.043  Sum_probs=132.9

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+.|++|+||||||||.||++++++|+++|.  +|++++|++......      .  ...+....+|+.+.+++...+ 
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~~~-   78 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYASAF-   78 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGGGG-
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeecccccccccccc-
Confidence            34568899999999999999999999999995  799999976432210      0  246777788988876654433 


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCC
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEG  180 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~  180 (319)
                            ..+|++||++|...     .........++|+.++..+++.+...         .-.++|++|+......    
T Consensus        79 ------~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~fi~~Ss~~~~~~----  134 (232)
T d2bkaa1          79 ------QGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKAG---------GCKHFNLLSSKGADKS----  134 (232)
T ss_dssp             ------SSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT----
T ss_pred             ------cccccccccccccc-----cccchhhhhhhcccccceeeeccccc---------CccccccCCccccccC----
Confidence                  37899999998531     12234566788999998888877542         2458999999776542    


Q ss_pred             CcCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHH----H----h
Q 020927          181 IRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGL----L----G  252 (319)
Q Consensus       181 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~----~  252 (319)
                                   ....|+.+|...+...+.    +...    ++..+.||.+-.+..... ....+...    +    .
T Consensus       135 -------------~~~~Y~~~K~~~E~~l~~----~~~~----~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~  192 (232)
T d2bkaa1         135 -------------SNFLYLQVKGEVEAKVEE----LKFD----RYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWA  192 (232)
T ss_dssp             -------------CSSHHHHHHHHHHHHHHT----TCCS----EEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGG
T ss_pred             -------------ccchhHHHHHHhhhcccc----cccc----ceEEecCceeecCCCcCc-HHHHHHHHHhhccCCccc
Confidence                         135699999988765422    2211    345689999987643321 12111111    1    1


Q ss_pred             hhhcCCHHHHHHHHHHHhcCCC
Q 020927          253 KYVIKNVEQGAATTCYVALHPH  274 (319)
Q Consensus       253 ~~~~~~~~~va~~i~~l~~s~~  274 (319)
                      .....+++|+|++++.++..+.
T Consensus       193 ~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         193 SGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             GGTEEEHHHHHHHHHHHHTSCC
T ss_pred             CCCeEEHHHHHHHHHHHHhcCc
Confidence            2223467999999999986443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.53  E-value=1e-13  Score=116.87  Aligned_cols=207  Identities=14%  Similarity=0.051  Sum_probs=130.5

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++||||||+|+||++++++|+++|+  .|+.+.|+++.....         ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            7899999999999999999999996  467778988654432         4578899999999999887765       


Q ss_pred             CccEEEEccccCCCCc-----------ccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccC
Q 020927          108 PLNILINNAGIMATPF-----------MLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFS  176 (319)
Q Consensus       108 ~id~lv~nag~~~~~~-----------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~  176 (319)
                      .+|.+||+++......           ............+|+.+...++.......         .+.....++.....+
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG---------VKHIVVVGSMGGTNP  138 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT---------CSEEEEEEETTTTCT
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc---------ccccccccccccCCC
Confidence            7899999998653211           11224456677888989888877666543         456777666554432


Q ss_pred             CCCCCcCcCCCCCCCCCccccchh-hHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHH--HHhh
Q 020927          177 YPEGIRFDRINDQSGYNRFSAYGQ-SKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVG--LLGK  253 (319)
Q Consensus       177 ~p~~~~~~~~~~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~  253 (319)
                      ..               +...+.. .+.....+...+.   ...|  +.+..+.||.+-.+.............  ....
T Consensus       139 ~~---------------~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~  198 (252)
T d2q46a1         139 DH---------------PLNKLGNGNILVWKRKAEQYL---ADSG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTD  198 (252)
T ss_dssp             TC---------------GGGGGGGCCHHHHHHHHHHHH---HHSS--SCEEEEEECEEECSCTTSSCEEEESTTGGGGSS
T ss_pred             Cc---------------ccccccccchhhhhhhhhhhh---hccc--ccceeecceEEECCCcchhhhhhccCcccccCC
Confidence            11               1112222 2222222222222   2345  777789999887664332211100000  0111


Q ss_pred             hhcCCHHHHHHHHHHHhcCCCccCCCccccc
Q 020927          254 YVIKNVEQGAATTCYVALHPHVKGLTGSYFA  284 (319)
Q Consensus       254 ~~~~~~~~va~~i~~l~~s~~~~~~~G~~~~  284 (319)
                      ..+.+++|+|++++.++.++..   .|+.+.
T Consensus       199 ~~~i~~~Dva~a~~~~l~~~~~---~g~~~~  226 (252)
T d2q46a1         199 TKTVPRADVAEVCIQALLFEEA---KNKAFD  226 (252)
T ss_dssp             CCEEEHHHHHHHHHHHTTCGGG---TTEEEE
T ss_pred             CCeEEHHHHHHHHHHHhCCccc---cCcEEE
Confidence            2245789999999999865443   455444

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.52  E-value=1.5e-13  Score=125.01  Aligned_cols=189  Identities=16%  Similarity=0.133  Sum_probs=132.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEeC---------CHHHHHHHHHHHHhh------CCCCceEEEEcCCCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLAL-RGVHVVMAVR---------NMAACREVKKAIVKE------IPNAKVQAMELDLSSL   92 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~r---------~~~~~~~~~~~~~~~------~~~~~v~~~~~Dl~~~   92 (319)
                      ++.||||||+|.||..++++|++ .|++|+++++         ..+..+.....+...      ..+.++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            56799999999999999999986 5789999873         111122333333221      1234688999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      +.++++++..    .++|++||.|+.....  ...+.....+++|+.++..++.++....         ..+++++++..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~~~---------~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLHK---------CDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc--ccccccccccccccccccccchhhhccC---------Ccccccccccc
Confidence            9988888753    4789999999975432  1224456788899999999998887532         44788777766


Q ss_pred             cccCCCCCC---cCcCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCc
Q 020927          173 HQFSYPEGI---RFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL  237 (319)
Q Consensus       173 ~~~~~p~~~---~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~  237 (319)
                      .+...+...   ..+.+.+.....+...|+.+|.+.+.+++.+...+   |  +.+.++.|+.+-.+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--l~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---C--CCEEEEecceeeccC
Confidence            654332211   12234455556677889999999999998887765   3  677778887775543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.28  E-value=5e-11  Score=102.76  Aligned_cols=187  Identities=22%  Similarity=0.214  Sum_probs=123.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +.||||||||.||..++++|.++|++|+.++|+.                       +|+.|.++++++++..     ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CC
Confidence            3599999999999999999999999999999863                       5999999999988876     78


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      |++||+|+.....  .........+..|+.....+.......          ...+++.||...+.. +.   .....+.
T Consensus        54 d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v~~~-~~---~~~~~e~  117 (281)
T d1vl0a_          54 NVVINCAAHTAVD--KCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDG-EA---KEPITEF  117 (281)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS-CC---SSCBCTT
T ss_pred             CEEEeeccccccc--cccccchhhcccccccccccccccccc----------cccccccccceeeec-cc---ccccccc
Confidence            9999999864331  122334566677777776666655443          336666666554432 11   1122333


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCchhHHHHHHHHhh-----------hhcCC
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGK-----------YVIKN  258 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~  258 (319)
                      ....+...|+.+|...+.+.+.    .   +  .....+.|+.+-.+...   +...+......           ..+..
T Consensus       118 ~~~~~~~~~~~~k~~~e~~~~~----~---~--~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~  185 (281)
T d1vl0a_         118 DEVNPQSAYGKTKLEGENFVKA----L---N--PKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTS  185 (281)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHH----H---C--SSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEE
T ss_pred             ccccchhhhhhhhhHHHHHHHH----h---C--CCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccch
Confidence            3445667899999887766533    2   2  33445888888665322   12222222211           12347


Q ss_pred             HHHHHHHHHHHhcC
Q 020927          259 VEQGAATTCYVALH  272 (319)
Q Consensus       259 ~~~va~~i~~l~~s  272 (319)
                      .+|+++++..++..
T Consensus       186 v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         186 TVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhh
Confidence            89999999999853

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.26  E-value=9.6e-12  Score=108.68  Aligned_cols=196  Identities=10%  Similarity=-0.018  Sum_probs=110.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      ++||||||||.||+.++++|+++|++|++++|+...................+.++.+|+.+.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            45999999999999999999999999999998643211111111111114568999999999988877765       67


Q ss_pred             cEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCC
Q 020927          110 NILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQ  189 (319)
Q Consensus       110 d~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~  189 (319)
                      +.++++++....             ..|..+...++..+...         ...++++.||.+.....+.          
T Consensus        77 ~~~~~~~~~~~~-------------~~~~~~~~~~l~~a~~~---------~~~~~v~~Ss~g~~~~~~~----------  124 (312)
T d1qyda_          77 DVVISALAGGVL-------------SHHILEQLKLVEAIKEA---------GNIKRFLPSEFGMDPDIME----------  124 (312)
T ss_dssp             SEEEECCCCSSS-------------STTTTTHHHHHHHHHHS---------CCCSEEECSCCSSCTTSCC----------
T ss_pred             chhhhhhhhccc-------------ccchhhhhHHHHHHHHh---------cCCcEEEEeeccccCCCcc----------
Confidence            888888874322             22344444444444321         2446777776543332111          


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCch-hHHH----------HHHHHhhhhcCC
Q 020927          190 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS-FFSG----------LVGLLGKYVIKN  258 (319)
Q Consensus       190 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~~-~~~~----------~~~~~~~~~~~~  258 (319)
                      ....+...|..+|.....    +..   ..+  +....+.||.+-.+...... ....          +...-....+..
T Consensus       125 ~~~~~~~~~~~~~~~~~~----~~~---~~~--~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  195 (312)
T d1qyda_         125 HALQPGSITFIDKRKVRR----AIE---AAS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVD  195 (312)
T ss_dssp             CCCSSTTHHHHHHHHHHH----HHH---HTT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEEC
T ss_pred             cccchhhhhhHHHHHHHH----hhc---ccc--cceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceee
Confidence            011122334444444333    222   234  55566778777543221110 0000          000011223468


Q ss_pred             HHHHHHHHHHHhcCC
Q 020927          259 VEQGAATTCYVALHP  273 (319)
Q Consensus       259 ~~~va~~i~~l~~s~  273 (319)
                      ++|+|++++.++..+
T Consensus       196 v~Dva~a~~~~l~~~  210 (312)
T d1qyda_         196 EDDVGTYTIKSIDDP  210 (312)
T ss_dssp             HHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHHhcCc
Confidence            999999999998543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.26  E-value=1.7e-11  Score=101.91  Aligned_cols=185  Identities=14%  Similarity=0.041  Sum_probs=115.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|+||||||||.||++++++|+++|+  +|+...|++..          .  ..++   ..+..+..++   .   ....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~~---~~~~~d~~~~---~---~~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRL---DNPVGPLAEL---L---PQLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTE---ECCBSCHHHH---G---GGCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--cccc---cccccchhhh---h---hccc
Confidence            58999999999999999999999997  67777776411          0  2233   3344443332   1   1234


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      ..+|.+|+++|.....    ...-.....+|+.++..+++.+...         .-.+++++||..+...          
T Consensus        61 ~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~---------~v~~~i~~Ss~~~~~~----------  117 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRALEM---------GARHYLVVSALGADAK----------  117 (212)
T ss_dssp             SCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHHHT---------TCCEEEEECCTTCCTT----------
T ss_pred             cchheeeeeeeeeccc----cccccccccchhhhhhhcccccccc---------cccccccccccccccc----------
Confidence            5789999999864221    1223567888999998888876432         2458999999776532          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc--hhH-HHHHHH-HhhhhcCCHHHH
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI--SFF-SGLVGL-LGKYVIKNVEQG  262 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~--~~~-~~~~~~-~~~~~~~~~~~v  262 (319)
                             ....|..+|...+.+.+    +...    -++..+.|+++-.+.....  ... ..+... .........+|+
T Consensus       118 -------~~~~y~~~K~~~E~~l~----~~~~----~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  182 (212)
T d2a35a1         118 -------SSIFYNRVKGELEQALQ----EQGW----PQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDL  182 (212)
T ss_dssp             -------CSSHHHHHHHHHHHHHT----TSCC----SEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHH
T ss_pred             -------cccchhHHHHHHhhhcc----cccc----ccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHH
Confidence                   24579999988775442    2211    1455688999876542211  000 000000 011223578999


Q ss_pred             HHHHHHHhcC
Q 020927          263 AATTCYVALH  272 (319)
Q Consensus       263 a~~i~~l~~s  272 (319)
                      |++++.++..
T Consensus       183 A~ai~~~~~~  192 (212)
T d2a35a1         183 ARALWRLALE  192 (212)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHcC
Confidence            9999999853

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.22  E-value=1.6e-11  Score=106.55  Aligned_cols=139  Identities=17%  Similarity=0.148  Sum_probs=98.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .||||||+|.||.++++.|.++|. ++.++++..                   .+.+|+++.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------------------~~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------------------cccCcCCCHHHHHHHHHHc-----CCC
Confidence            599999999999999999999885 444544321                   1347999999999998876     799


Q ss_pred             EEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCCCC
Q 020927          111 ILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQS  190 (319)
Q Consensus       111 ~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~~~  190 (319)
                      +|||+||.....  .+.+.-...+.+|+.+...+..++..          .+.+++++||...+... ..   ....+..
T Consensus        57 ~Vih~Aa~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~~~~~~~ss~~~~~~~-~~---~~~~E~~  120 (298)
T d1n2sa_          57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----------TGAWVVHYSTDYVFPGT-GD---IPWQETD  120 (298)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----------TTCEEEEEEEGGGSCCC-TT---CCBCTTS
T ss_pred             EEEEeccccccc--ccccCccccccccccccccchhhhhc----------cccccccccccccccCC-CC---CCCcccc
Confidence            999999965332  22344567788999998888877632          24578888776655432 21   1123344


Q ss_pred             CCCccccchhhHHHHHHHHH
Q 020927          191 GYNRFSAYGQSKLANVLHTS  210 (319)
Q Consensus       191 ~~~~~~~Y~~sK~a~~~~~~  210 (319)
                      ...+...|+.+|.+.+.+.+
T Consensus       121 ~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         121 ATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CCCCSSHHHHHHHHHHHHHH
T ss_pred             ccCCCchHhhhhhhhhhhHH
Confidence            45567789999998876553

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.02  E-value=9.2e-10  Score=95.07  Aligned_cols=83  Identities=18%  Similarity=0.201  Sum_probs=62.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR--EVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      +.|+||||||||.||++++++|+++|++|++++|+.....  .....+.... ...+.++.+|+.+.....+.++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh-----
Confidence            4578999999999999999999999999999998643321  1111111111 4468889999999988777766     


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                        ..+.+|++++.
T Consensus        76 --~~~~vi~~~~~   86 (307)
T d1qyca_          76 --NVDVVISTVGS   86 (307)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --hceeeeecccc
Confidence              67889998874

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.93  E-value=8e-13  Score=108.26  Aligned_cols=47  Identities=17%  Similarity=0.198  Sum_probs=43.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI   77 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~   77 (319)
                      +|.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++....
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            57788888999999999999999999999999999999999887664

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.92  E-value=7.1e-09  Score=92.20  Aligned_cols=152  Identities=16%  Similarity=0.046  Sum_probs=93.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHH-HHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASV-RKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v-~~~~~~i~~~~  106 (319)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+.++...  ..+..   ..++..+.+|+.+..++ +.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            57999999999999999999999999999999998755332  12211   34688999999996543 3333       


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCC
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRI  186 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~  186 (319)
                      ...|.++++.....              ..++....+++.++...         ...++++.||.......+.       
T Consensus        70 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~aa~~a---------gv~~~v~~Ss~~~~~~~~~-------  119 (350)
T d1xgka_          70 EGAHLAFINTTSQA--------------GDEIAIGKDLADAAKRA---------GTIQHYIYSSMPDHSLYGP-------  119 (350)
T ss_dssp             TTCSEEEECCCSTT--------------SCHHHHHHHHHHHHHHH---------SCCSEEEEEECCCGGGTSS-------
T ss_pred             cCCceEEeeccccc--------------chhhhhhhHHHHHHHHh---------CCCceEEEeeccccccCCc-------
Confidence            26777776654211              11233334444444322         1346677777554432221       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCC
Q 020927          187 NDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN  236 (319)
Q Consensus       187 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~  236 (319)
                            .....|..+|...+.+.+.       .+  +....+.||.+..+
T Consensus       120 ------~~~~~~~~~k~~~~~~~~~-------~~--~~~~~vr~~~~~~~  154 (350)
T d1xgka_         120 ------WPAVPMWAPKFTVENYVRQ-------LG--LPSTFVYAGIYNNN  154 (350)
T ss_dssp             ------CCCCTTTHHHHHHHHHHHT-------SS--SCEEEEEECEEGGG
T ss_pred             ------ccchhhhhhHHHHHHHHHh-------hc--cCceeeeeceeecc
Confidence                  1234567788776655432       22  44455677765443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=1.7e-09  Score=93.80  Aligned_cols=204  Identities=14%  Similarity=0.052  Sum_probs=115.6

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh--cCCC
Q 020927           32 AIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS--SGLP  108 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~--~~~~  108 (319)
                      ||||||+|.||..++++|+++|. .|+++++-... .+.....     .       .++.+......+...+..  .+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVNLV-----D-------LNIADYMDKEDFLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHHHH-----T-------SCCSEEEEHHHHHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhccc-----c-------cchhhhccchHHHHHHhhhhcccc
Confidence            89999999999999999999997 58877632111 0000100     1       122222222233333332  3457


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCcCCCC
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRIND  188 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~~~~~  188 (319)
                      +++++|.|+.....    .........+|+.+...++..+...          .-++|+.||.......+..    ....
T Consensus        69 ~~~i~~~aa~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~----------~i~~v~~ss~~~~~~~~~~----~~~~  130 (307)
T d1eq2a_          69 VEAIFHEGACSSTT----EWDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTSD----FIES  130 (307)
T ss_dssp             CCEEEECCSCCCTT----CCCHHHHHHHTHHHHHHHHHHHHHH----------TCCEEEEEEGGGGTTCCSC----BCSS
T ss_pred             hhhhhhhccccccc----ccccccccccccccccccccccccc----------ccccccccccccccccccc----cccc
Confidence            88999988853322    2344556777788888777766543          2245555555544322211    1222


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEeeCCcccCCcccCc----hhHHHHHHHH-------------
Q 020927          189 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI----SFFSGLVGLL-------------  251 (319)
Q Consensus       189 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~-------------  251 (319)
                      .....+...|+.+|.+.+.+++.+..++.     +.+..+.|..+-.+.....    .....+...+             
T Consensus       131 ~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~-----~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  205 (307)
T d1eq2a_         131 REYEKPLNVYGYSKFLFDEYVRQILPEAN-----SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSE  205 (307)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGGCS-----SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-----------
T ss_pred             ccccccccccccccchhhhhccccccccc-----cccccccceeEeeccccccccccccccccccccccccceeeecCcc
Confidence            22344567899999999998887766543     4555566766655432111    0111111111             


Q ss_pred             -hhhhcCCHHHHHHHHHHHhc
Q 020927          252 -GKYVIKNVEQGAATTCYVAL  271 (319)
Q Consensus       252 -~~~~~~~~~~va~~i~~l~~  271 (319)
                       ....+..++++++++..++.
T Consensus       206 ~~~r~~~~v~d~~~~~~~~~~  226 (307)
T d1eq2a_         206 NFKRDFVYVGDVADVNLWFLE  226 (307)
T ss_dssp             --CBCEEEHHHHHHHHHHHHH
T ss_pred             ceeeeeeecccHHHHHHHHhh
Confidence             11123467899999998874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=2.8e-06  Score=67.98  Aligned_cols=87  Identities=20%  Similarity=0.220  Sum_probs=65.9

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..+++....++............|+.+.+++.....  
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence            46789999999998 6999999999999998 7999999877666544433221112334556789999887766654  


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                           ..|++||+..+
T Consensus        90 -----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 -----SADILTNGTKV  100 (182)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----ccceeccccCC
Confidence                 77999999875

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=7.4e-06  Score=64.84  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=55.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.+|||+||+|++|...+..+...|++|+++++++++.+.+. ++     +..-.   +|.++++-.+++.+..  ...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~-----Ga~~v---i~~~~~~~~~~i~~~t--~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN-----GAHEV---FNHREVNYIDKIKKYV--GEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCSEE---EETTSTTHHHHHHHHH--CTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc-----Ccccc---cccccccHHHHhhhhh--ccC
Confidence            6899999999999999999998889999999999877654432 22     32211   3666654444333322  123


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999999887

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.01  E-value=1.9e-05  Score=62.15  Aligned_cols=76  Identities=16%  Similarity=0.259  Sum_probs=56.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++|.|+|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+.      .........+..........+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~------~~~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG------VQHSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc------ccccccccccccchhhhHhhhh-------
Confidence            4789999987 9999999999999999999999999988776543      2234445566666656555543       


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ..|.++....
T Consensus        67 ~~~~~i~~~~   76 (182)
T d1e5qa1          67 KHDLVISLIP   76 (182)
T ss_dssp             TSSEEEECSC
T ss_pred             ccceeEeecc
Confidence            4566665543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.98  E-value=1.4e-05  Score=63.66  Aligned_cols=106  Identities=19%  Similarity=0.205  Sum_probs=71.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.+|||+||+|++|.+.+.-....|++|+.+++++++.+...+    .  +....+   |-.+++..+.+.+..  ...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~--Ga~~vi---~~~~~~~~~~~~~~~--~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I--GFDAAF---NYKTVNSLEEALKKA--SPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSEEE---ETTSCSCHHHHHHHH--CTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h--hhhhhc---ccccccHHHHHHHHh--hcC
Confidence            58999999999999999999999999999999999877554332    1  333333   333333333333322  234


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      ++|+++.+.|.                        ...+..++.++.       .|+++.++....+.
T Consensus        98 Gvd~v~D~vG~------------------------~~~~~~~~~l~~-------~G~~v~~G~~~~~~  134 (182)
T d1v3va2          98 GYDCYFDNVGG------------------------EFLNTVLSQMKD-------FGKIAICGAISVYN  134 (182)
T ss_dssp             CEEEEEESSCH------------------------HHHHHHGGGEEE-------EEEEEECCCGGGTT
T ss_pred             CCceeEEecCc------------------------hhhhhhhhhccC-------CCeEEeecceeecc
Confidence            79999999983                        123344444443       68999998766543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.97  E-value=1.9e-05  Score=62.71  Aligned_cols=79  Identities=14%  Similarity=0.276  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.+|||+||+|++|...+..+...|++|+++++++++.+.    +++.  +... .  .|..+++-.+++ .+.. ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~--Ga~~-v--i~~~~~~~~~~v-~~~t-~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL--GVEY-V--GDSRSVDFADEI-LELT-DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT--CCSE-E--EETTCSTHHHHH-HHHT-TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----cccc--cccc-c--ccCCccCHHHHH-HHHh-CCC
Confidence            58999999999999999999888889999999998766543    2222  3222 2  344554333332 2221 123


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            7999999998

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.89  E-value=3.9e-05  Score=59.72  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=59.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+++++++||.|+ |++|..+++.|...|. +|.++.|+.+++++..+.+     +  ....  +   .+++.+.+.   
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~--~~~~--~---~~~~~~~l~---   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----G--GEAV--R---FDELVDHLA---   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----T--CEEC--C---GGGHHHHHH---
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----h--cccc--c---chhHHHHhc---
Confidence            3789999999998 9999999999999998 6999999998888777665     3  2222  2   233444444   


Q ss_pred             hcCCCccEEEEccccCCC
Q 020927          104 SSGLPLNILINNAGIMAT  121 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~  121 (319)
                          ..|++|++.+...+
T Consensus        84 ----~~Divi~atss~~~   97 (159)
T d1gpja2          84 ----RSDVVVSATAAPHP   97 (159)
T ss_dssp             ----TCSEEEECCSSSSC
T ss_pred             ----cCCEEEEecCCCCc
Confidence                68999999985433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.88  E-value=2.5e-05  Score=62.56  Aligned_cols=86  Identities=17%  Similarity=0.224  Sum_probs=55.5

Q ss_pred             CCEEEE-eCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-cC
Q 020927           29 GLTAIV-TGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-SG  106 (319)
Q Consensus        29 ~k~vlI-tGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-~~  106 (319)
                      |.+++| +||+|++|.+.+.-.-..|++|+.+.|+.+..++..+.+++.  +....+. .|-.+..+..+.+.++.. ..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~vi~-~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVIT-EDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEEE-HHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccEEEe-ccccchhHHHHHHHHHHhhcc
Confidence            555555 799999999998888888999999988877766666666554  3222221 111111223333444433 35


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      +++|+++.+.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            57999999887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.87  E-value=8.3e-05  Score=58.16  Aligned_cols=82  Identities=22%  Similarity=0.214  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC-
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG-  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~-  106 (319)
                      .|.+++|+| +|+||...+..+...|++|+++++++++.+.+.+ +     +....+ ..|-.+ ++.....+.+.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~~-~~~~~~-~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVTL-VVDPAK-EEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEEE-ECCTTT-SCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEEE-eccccc-cccchhhhhhhcccc
Confidence            578999997 6899999999988899999999999988765433 1     322222 222222 22334445554443 


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +.+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            479999999984

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.80  E-value=2.7e-05  Score=61.71  Aligned_cols=105  Identities=17%  Similarity=0.155  Sum_probs=67.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+|.+|||+||+||+|...+.-....|++|+.+++++++.+.+.+ +     +.....   |-.+.  ..+.....  ..
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~vi---~~~~~--~~~~~~~~--~~   96 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKEVL---AREDV--MAERIRPL--DK   96 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSEEE---ECC-----------C--CS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccceee---ecchh--HHHHHHHh--hc
Confidence            468999999999999999988888899999999998877654432 1     333222   22221  11212111  23


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQF  175 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~  175 (319)
                      +++|++|.+.|-.                        .+...+..++.       .||++.++...+..
T Consensus        97 ~gvD~vid~vgg~------------------------~~~~~l~~l~~-------~Griv~~G~~~g~~  134 (176)
T d1xa0a2          97 QRWAAAVDPVGGR------------------------TLATVLSRMRY-------GGAVAVSGLTGGAE  134 (176)
T ss_dssp             CCEEEEEECSTTT------------------------THHHHHHTEEE-------EEEEEECSCCSSSC
T ss_pred             cCcCEEEEcCCch------------------------hHHHHHHHhCC-------CceEEEeecccCcc
Confidence            4899999999831                        12333444543       78999999876554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=4.8e-05  Score=60.13  Aligned_cols=80  Identities=14%  Similarity=0.211  Sum_probs=57.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|++|||+||+|++|...+.-....|++|+.+++++++.+...+ +     +...   .+|.++++-.+++ .++- ...
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l-----Ga~~---vi~~~~~d~~~~v-~~~t-~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERL-KEIT-GGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHH-HHHT-TTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c-----CCeE---EEECCCCCHHHHH-HHHh-CCC
Confidence            48999999999999999999988899999999999988665432 2     3322   2366665444333 3321 234


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            79999999883

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=5.6e-05  Score=59.42  Aligned_cols=78  Identities=22%  Similarity=0.329  Sum_probs=58.6

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ...+++||.|||.|| ||.+++++..|.+.|.+|.++.|+.++.++..+.+....   .+..+..|  +.          
T Consensus        12 ~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~~~~--~~----------   75 (170)
T d1nyta1          12 LSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQALSMD--EL----------   75 (170)
T ss_dssp             HTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEECCSG--GG----------
T ss_pred             cCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---cccccccc--cc----------
Confidence            346789999999997 888999999999999999999999999888777654431   23332222  11          


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                        .....|++||+..+
T Consensus        76 --~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 --EGHEFDLIINATSS   89 (170)
T ss_dssp             --TTCCCSEEEECCSC
T ss_pred             --cccccceeeccccc
Confidence              12368999999865

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=0.0011  Score=51.59  Aligned_cols=81  Identities=22%  Similarity=0.248  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++... ++     +.. .++..+-.+..+..+.+..-  ..
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~--~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ--LG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc--CC
Confidence            4788999986 9999999999999998 7999999998876543 22     322 23333444444444433332  22


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            379999999994

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=9.4e-05  Score=55.42  Aligned_cols=74  Identities=15%  Similarity=0.284  Sum_probs=58.3

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      +.|+|.|+ |.+|+.+++.|.+.|..|++++++++.++...+.       ..+.++..|.++++.++++-      ....
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~------i~~a   66 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAG------IEDA   66 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTT------TTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhcC------hhhh
Confidence            36899997 9999999999999999999999999887765432       14668889999998776651      1267


Q ss_pred             cEEEEccc
Q 020927          110 NILINNAG  117 (319)
Q Consensus       110 d~lv~nag  117 (319)
                      |.++....
T Consensus        67 ~~vv~~t~   74 (132)
T d1lssa_          67 DMYIAVTG   74 (132)
T ss_dssp             SEEEECCS
T ss_pred             hhhcccCC
Confidence            78777544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=4.8e-05  Score=51.36  Aligned_cols=43  Identities=26%  Similarity=0.324  Sum_probs=37.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      -++.++||+||+||+|...+.-+...|++|+.+++++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998888899999999998776544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=0.0002  Score=56.21  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=59.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      ..+++||+|+|.|+ ||.+++++..|.+.+.+|+++.|+.++++...+.+...   ..+..+..|-.             
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~-------------   75 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI-------------   75 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC-------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc-------------
Confidence            45789999999986 77799999999987789999999999988888777543   24555554421             


Q ss_pred             hcCCCccEEEEccccC
Q 020927          104 SSGLPLNILINNAGIM  119 (319)
Q Consensus       104 ~~~~~id~lv~nag~~  119 (319)
                       .....|++||++...
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             134789999998763

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.54  E-value=0.0026  Score=48.24  Aligned_cols=120  Identities=14%  Similarity=0.129  Sum_probs=78.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      -.++.|.|+|| |.+|..+|..|+.+|.  +|++++++++.++.....+.+...  ...+.....|..            
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~------------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD------------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG------------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH------------
Confidence            45678999997 9999999999999985  799999999887776666765422  233444444431            


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                        .....|++|.++|....+.    +.-.+.+..|    ..+++.+.+.+.+..    ..+.+|++|....
T Consensus        71 --~l~daDvvvitag~~~~~~----~~R~dl~~~N----~~i~~~i~~~i~~~~----p~a~~ivvtNPvd  127 (148)
T d1ldna1          71 --DCRDADLVVICAGANQKPG----ETRLDLVDKN----IAIFRSIVESVMASG----FQGLFLVATNPVD  127 (148)
T ss_dssp             --GTTTCSEEEECCSCCCCTT----TCSGGGHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSSHH
T ss_pred             --HhccceeEEEecccccccC----cchhHHHHHH----HHHHHHHHHHHHhhC----CCceEEEecCccH
Confidence              1236799999999753322    1122333334    445566666665542    4667888776543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.53  E-value=0.00051  Score=52.15  Aligned_cols=118  Identities=17%  Similarity=0.145  Sum_probs=70.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      .+.|+||+|.+|.++|..|+.+|.  ++++.+.++.+.+.  ..+.....-......   + ...+..+.++       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~~~~~~~~---~-~~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIETRATVKGY---L-GPEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSSSCEEEEE---E-SGGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhhhcCCCeE---E-cCCChHHHhC-------C
Confidence            588999999999999999999985  69999998754332  233222111111111   1 1222222222       6


Q ss_pred             ccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          109 LNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       109 id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                      .|++|..+|....+.    +.-.+.++.|..-.    +.+.+.+.+.    ..++.++++|...-
T Consensus        69 aDivVitag~~~~~g----~sR~~ll~~N~~i~----~~i~~~i~~~----~p~~iiivvtNPvD  121 (144)
T d1mlda1          69 CDVVVIPAGVPRKPG----MTRDDLFNTNATIV----ATLTAACAQH----CPDAMICIISNPVN  121 (144)
T ss_dssp             CSEEEECCSCCCCTT----CCGGGGHHHHHHHH----HHHHHHHHHH----CTTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCCC----CCcchHHHHHHHHH----HHHHHHHHhc----CCCeEEEEecCchh
Confidence            899999999643321    22344556665444    4455555443    24678888887554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.52  E-value=0.00089  Score=50.89  Aligned_cols=117  Identities=11%  Similarity=0.100  Sum_probs=72.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           29 GLTAIVTGASSGIGTETARVLALRG--VHVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .++|.|.|+ |.+|..+|..|+.+|  .+|++++++++.++.....+..... .........|..              .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------H
Confidence            567888896 999999999999998  3799999999887766666654211 223344455531              1


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ....|++|..+|....+.    ..-.+.+..|.    .+++.+.+.+.+..    .++.++++|...
T Consensus        70 ~~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~~----p~aivivvtNPv  124 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDSG----FDGIFLVAANPV  124 (146)
T ss_dssp             GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTT----CCSEEEECSSSH
T ss_pred             hccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhcC----CCcEEEEeCCcc
Confidence            236799999999643321    12233344443    45566666665542    466777777544

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=0.00046  Score=54.40  Aligned_cols=82  Identities=17%  Similarity=0.267  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|||+|| |+||...+..+...|+ +|+++++++++.+.+. ++     +... ++...=.+..+..+.+.++.. .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-vi~~~~~~~~~~~~~i~~~~~-~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GADL-TLNRRETSVEERRKAIMDITH-G   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCSE-EEETTTSCHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cc-----cceE-EEeccccchHHHHHHHHHhhC-C
Confidence            5899999997 8999999999999998 8999999998876442 22     3222 222221222223222332221 2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            369999999984

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.51  E-value=0.00049  Score=52.90  Aligned_cols=126  Identities=14%  Similarity=0.050  Sum_probs=74.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC--CCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI--PNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      --+.+++.|.|+ |.+|..+|..|+..+. ++++.+.+++.++.....+....  .+........  .+.   ++.++  
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~--   75 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT--   75 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT--
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc--
Confidence            345677888897 9999999999999885 89999998877766655554421  1212111111  111   12222  


Q ss_pred             HhcCCCccEEEEccccCCCCcccCc-ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSK-DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                           ..|++|..+|....+.+.+. ..-.+.+..|.    .+++.+.+.+.+..    .++-++++|...
T Consensus        76 -----~adiVvitag~~~~~g~~~~~~tR~~l~~~n~----~iv~~i~~~i~~~~----p~aiviivsNPv  133 (154)
T d1pzga1          76 -----GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKYC----PKTFIIVVTNPL  133 (154)
T ss_dssp             -----TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSH
T ss_pred             -----CCCeEEEecccccCCCCCCcccchhhhhhhhH----HHHHHHHHHHHhcC----CCcEEEEeCCcH
Confidence                 67999999997654332211 12233344443    44555555555442    466777777644

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.44  E-value=0.00014  Score=54.38  Aligned_cols=72  Identities=14%  Similarity=0.112  Sum_probs=55.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHH-HHHHHhcCCC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKF-ASEFKSSGLP  108 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~-~~~i~~~~~~  108 (319)
                      |.++|.|+ |-+|+.+++.|.++|..|++++.+++.++...        ......+.+|.++++.+.++ +.       .
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~a~i~-------~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSLGIR-------N   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT--------TTCSEEEECCTTCTTHHHHHTGG-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH--------HhCCcceeeecccchhhhccCCc-------c
Confidence            56788866 79999999999999999999999998877643        22345667999999877665 22       5


Q ss_pred             ccEEEEccc
Q 020927          109 LNILINNAG  117 (319)
Q Consensus       109 id~lv~nag  117 (319)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            678777766

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.43  E-value=0.0017  Score=49.19  Aligned_cols=120  Identities=13%  Similarity=0.107  Sum_probs=75.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |.|.|+|+ |.+|..+|..|+.+|.  ++++.+++++.++.....+.+..+  +........|..   +           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~---~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA---A-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG---G-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH---H-----------
Confidence            67888895 8999999999999984  799999999988766666665321  233333333421   1           


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...-|++|..||......+.....-.+.++.|    ..+++.+.+.+.+..    .++-+|++|...
T Consensus        67 l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~----p~aivivvtNPv  125 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKESG----FHGVLVVISNPV  125 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHTT----CCSEEEECSSSH
T ss_pred             hccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhcC----CCeEEEEecCcH
Confidence            12679999999975432211111122334444    356667777766542    466778777644

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.42  E-value=0.00036  Score=54.37  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+++|.|++|++|..++..+...|. +|+++++++++.+...+ +     +.. .+  .|.++++-.++..+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~-~~--i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GAD-YV--INASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCS-EE--EETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCc-ee--eccCCcCHHHHHHHHh--hc
Confidence            578999999999999999999999996 89999999877655432 2     322 22  2444444444433322  12


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            369999999984

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.40  E-value=0.00015  Score=56.94  Aligned_cols=75  Identities=19%  Similarity=0.227  Sum_probs=51.9

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+|++|||+||+|++|...+..+...|++|+.+++++++.+...+ +     +....+   |..+.  .    .++. ..
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l-----Ga~~~i---~~~~~--~----~~~~-~~   89 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L-----GAEEAA---TYAEV--P----ERAK-AW   89 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T-----TCSEEE---EGGGH--H----HHHH-HT
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c-----ccceee---ehhhh--h----hhhh-cc
Confidence            378999999999999999999888889999999998876554332 2     322221   33321  1    2222 23


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      .++|++|.+.|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            47999999776

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.35  E-value=0.0039  Score=47.91  Aligned_cols=122  Identities=11%  Similarity=0.039  Sum_probs=79.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..+..+.|.|.|+ |.+|.++|..|+.+|.  ++++.+++++.++.....+.+...  +........|..+         
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~---------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV---------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh---------
Confidence            3455678888896 9999999999999995  799999999888766666654211  2233333333322         


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                           ...-|++|..||....+. .   .-.+.++.|    ..+++.+.+.+.+..    .++-+|++|...-
T Consensus        86 -----~~~adiVVitAg~~~~~g-~---tR~~l~~~N----~~i~~~i~~~i~~~~----p~aiiivvtNPvD  141 (160)
T d1i0za1          86 -----TANSKIVVVTAGVRQQEG-E---SRLNLVQRN----VNVFKFIIPQIVKYS----PDCIIIVVSNPVD  141 (160)
T ss_dssp             -----GTTCSEEEECCSCCCCTT-C---CGGGGHHHH----HHHHHHHHHHHHHHC----TTCEEEECSSSHH
T ss_pred             -----cccccEEEEecCCccccC-c---chHHHHHHH----HHHHHHHHHHHHhcC----CCcEEEEeCCchH
Confidence                 126799999999743321 1   122333333    456777777776652    4677888887553

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=0.00028  Score=56.12  Aligned_cols=105  Identities=18%  Similarity=0.249  Sum_probs=63.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVH-VVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+++|||+||+||+|...+.-.-..|++ |+.+++++++.......+     +....   .|..+++ ..+.++++.  .
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad~v---i~~~~~~-~~~~~~~~~--~   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFDAA---VNYKTGN-VAEQLREAC--P   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCSEE---EETTSSC-HHHHHHHHC--T
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cceEE---eeccchh-HHHHHHHHh--c
Confidence            3589999999999999988887778985 666677766655544433     32322   2444443 333344443  2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .++|+++.+.|-         +               .++..+..++.       .|+++.+++.++.
T Consensus        99 ~GvDvv~D~vGg---------~---------------~~~~~~~~l~~-------~G~iv~~G~~s~~  135 (187)
T d1vj1a2          99 GGVDVYFDNVGG---------D---------------ISNTVISQMNE-------NSHIILCGQISQY  135 (187)
T ss_dssp             TCEEEEEESSCH---------H---------------HHHHHHTTEEE-------EEEEEEC------
T ss_pred             cCceEEEecCCc---------h---------------hHHHHhhhccc-------cccEEEecccccc
Confidence            379999999982         0               22334444543       7899999876654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.0032  Score=48.34  Aligned_cols=122  Identities=12%  Similarity=0.104  Sum_probs=78.5

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      -+++...|.|+|+ |.+|..+|..|+.+|.  ++++.+++++.++.....+.+...  +........|..          
T Consensus        15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~----------   83 (159)
T d2ldxa1          15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN----------   83 (159)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG----------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh----------
Confidence            4456667888896 9999999999999985  799999999888777767765322  222222233332          


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCccc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRH  173 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~  173 (319)
                          ....-|++|..||....+. .+   -.+.++.|    ..+.+.+.+.+.+..    .++.++++|...-
T Consensus        84 ----~~~~adivvitag~~~~~~-~~---R~dll~~N----~~i~~~i~~~i~~~~----p~~ivivvtNPvD  140 (159)
T d2ldxa1          84 ----VSANSKLVIITAGARMVSG-QT---RLDLLQRN----VAIMKAIVPGVIQNS----PDCKIIVVTNPVD  140 (159)
T ss_dssp             ----GGTTEEEEEECCSCCCCTT-TC---SSCTTHHH----HHHHHHHTTTHHHHS----TTCEEEECSSSHH
T ss_pred             ----hhccccEEEEecccccCCC-CC---HHHHHHHH----HHHHHHHHHHHhccC----CCeEEEEeCCcHH
Confidence                1236799999999744332 12   12234434    345666666665542    4778888887543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.17  E-value=0.0009  Score=52.05  Aligned_cols=45  Identities=16%  Similarity=0.271  Sum_probs=39.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~   73 (319)
                      ++|.|+|.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999987 8999999999999997 7999999998887766543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00061  Score=55.67  Aligned_cols=80  Identities=19%  Similarity=0.195  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCC----------------CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCC
Q 020927           26 DGSGLTAIVTGAS----------------SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDL   89 (319)
Q Consensus        26 ~l~~k~vlItGas----------------~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl   89 (319)
                      +|+|++||||+|.                |-.|.+||+++..+|++|.++.-....           .+...+..+  .+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~--~~   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRV--DV   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEE--EC
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccc--ee
Confidence            6899999999874                589999999999999999888654310           012344443  34


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC
Q 020927           90 SSLASVRKFASEFKSSGLPLNILINNAGIMAT  121 (319)
Q Consensus        90 ~~~~~v~~~~~~i~~~~~~id~lv~nag~~~~  121 (319)
                      ...++..+.+.+.   ....|++|++|++...
T Consensus        70 ~t~~~m~~~~~~~---~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 MTALEMEAAVNAS---VQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CSHHHHHHHHHHH---GGGCSEEEECCBCCSE
T ss_pred             hhhHHHHHHHHhh---hccceeEeeeechhhh
Confidence            4544554444433   3367999999998543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.07  E-value=0.00085  Score=52.54  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++.+.+.+ +     +.. ++  +|..+++..++ +.++.. .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-l-----Ga~-~~--i~~~~~~~~~~-v~~~t~-g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-Y-----GAT-DI--LNYKNGHIEDQ-VMKLTN-G   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-H-----TCS-EE--ECGGGSCHHHH-HHHHTT-T
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-h-----Ccc-cc--ccccchhHHHH-HHHHhh-c
Confidence            5889999986 8999999998888997 79999999887665432 2     322 22  34444333332 222221 2


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999994

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.04  E-value=0.00031  Score=55.34  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=57.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEE-cCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAME-LDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++||.|||.|+ ||.+++++..|.+.| +|.++.|+.++.+...+.+...........+. .|+.+           
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~-----------   79 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDV-----------   79 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTC-----------
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhh-----------
Confidence            35689999999986 578999999997766 99999999999998888776543332211111 11111           


Q ss_pred             HhcCCCccEEEEccccC
Q 020927          103 KSSGLPLNILINNAGIM  119 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~  119 (319)
                        .....|++||+..+.
T Consensus        80 --~~~~~dliIn~tp~g   94 (177)
T d1nvta1          80 --DLDGVDIIINATPIG   94 (177)
T ss_dssp             --CCTTCCEEEECSCTT
T ss_pred             --ccchhhhhccCCccc
Confidence              123689999998753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.03  E-value=0.0026  Score=48.95  Aligned_cols=83  Identities=18%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--------hhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIV--------KEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~--------~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +|.|.|+ |-+|.++|+.|.+.|++|++++|+++..++..+.-.        +...+..+.++..   ..+.+.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            4677765 999999999999999999999999887765443210        1112234444433   356777888888


Q ss_pred             HhcCCCccEEEEccc
Q 020927          103 KSSGLPLNILINNAG  117 (319)
Q Consensus       103 ~~~~~~id~lv~nag  117 (319)
                      .....+=.+++..++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            665433334444433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.99  E-value=0.0073  Score=45.78  Aligned_cols=123  Identities=13%  Similarity=0.076  Sum_probs=75.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC--CCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI--PNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..+.|.|+ |++|..++..|+.++. ++++++++++.++.....+.+..  .+.+......|  +.+           ..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            45778895 9999999998888885 89999998877776665554421  13333333322  111           12


Q ss_pred             CCccEEEEccccCCCCcccCc-ccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          107 LPLNILINNAGIMATPFMLSK-DNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      ...|++|.++|....+.+.+. ..-...+..|.    .+++.+.+.+.+..    .++.++++|.....
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~----p~aivivvtNPvD~  130 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNC----PNAFIIVVTNPVDV  130 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSHHH
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcC----CCeEEEEecCchHH
Confidence            367999999997544332221 12233445453    56666666666542    46678887775433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.98  E-value=0.011  Score=44.20  Aligned_cols=116  Identities=14%  Similarity=0.113  Sum_probs=73.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCC--HHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRN--MAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~--~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+.|+||+|.+|.++|..|+.++.  ++++.+.+  ++.++.....+.+..+ ..+......|..+              
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence            578999999999999999999985  69999853  4445544444543211 3344444444321              


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...-|++|..||....+.    +.-.+.++.|    ..+++.+.+.+.+..    .++.++++|...
T Consensus        68 ~~~aDiVvitaG~~~~~g----~~R~dl~~~N----~~I~~~i~~~i~~~~----p~~i~ivvtNPv  122 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG----QTRIDLAGDN----APIMEDIQSSLDEHN----DDYISLTTSNPV  122 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT----CCHHHHHHHH----HHHHHHHHHHHHTTC----SCCEEEECCSSH
T ss_pred             hhhcCEEEEecccccccC----CchhhHHHHH----HHHHHHHHHHHHhcC----CCceEEEecChH
Confidence            126799999999643321    2223344444    457777777777653    466777776644

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.97  E-value=0.0048  Score=47.94  Aligned_cols=42  Identities=26%  Similarity=0.248  Sum_probs=37.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      +|++.|.|| |.+|.++|..|+++|++|.+++|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            488999998 899999999999999999999999887766543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.96  E-value=0.0014  Score=52.26  Aligned_cols=117  Identities=17%  Similarity=0.160  Sum_probs=69.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++...+.      +...   ..|-.+. ++.+.+.++. ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~------Ga~~---~~~~~~~-~~~~~i~~~t-~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ------GFEI---ADLSLDT-PLHEQIAALL-GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT------TCEE---EETTSSS-CHHHHHHHHH-SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc------cccE---EEeCCCc-CHHHHHHHHh-CC
Confidence            5889999986 7999888888777887 799999998877644321      3222   2233343 3333333332 23


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                      ..+|++|.+.|......  +...      .+..+.-..++..+..++.       .|+|+.++-.
T Consensus        93 ~g~D~vid~vG~~~~~~--~~~~------~~~~~~~~~l~~~~~~~r~-------gG~v~~~G~~  142 (195)
T d1kola2          93 PEVDCAVDAVGFEARGH--GHEG------AKHEAPATVLNSLMQVTRV-------AGKIGIPGLY  142 (195)
T ss_dssp             SCEEEEEECCCTTCBCS--STTG------GGSBCTTHHHHHHHHHEEE-------EEEEEECSCC
T ss_pred             CCcEEEEECccccccCC--cccc------eeecCcHHHHHHHHHHHhc-------CCEEEEeeec
Confidence            47999999999532110  0000      0122223345555555544       6799988853

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.93  E-value=0.012  Score=44.23  Aligned_cols=114  Identities=16%  Similarity=0.202  Sum_probs=67.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHH--HHHHHHHHHHhhCC----CCceEEEEcCCCCHHHHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMA--ACREVKKAIVKEIP----NAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~--~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .+.|+||+|.+|.++|..|+.+|.  ++++++++++  +++.....+.....    ..++.....+  +.+         
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~---------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR---------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG---------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH---------
Confidence            589999999999999999999994  8999998753  34444444544211    2233333322  111         


Q ss_pred             HhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCC
Q 020927          103 KSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS  170 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS  170 (319)
                        .....|++|.+||....+. .   .-.+.++.|.    .+++.+.+.+.+..     +..|+.||.
T Consensus        71 --~l~~aDvVVitAG~~~~~g-~---sR~dl~~~Na----~iv~~i~~~i~~~~-----~~~iivVtN  123 (145)
T d1hyea1          71 --IIDESDVVIITSGVPRKEG-M---SRMDLAKTNA----KIVGKYAKKIAEIC-----DTKIFVITN  123 (145)
T ss_dssp             --GGTTCSEEEECCSCCCCTT-C---CHHHHHHHHH----HHHHHHHHHHHHHC-----CCEEEECSS
T ss_pred             --HhccceEEEEecccccCCC-C---ChhhhhhhhH----HHHHHHHHHHhccC-----CCeEEEEcC
Confidence              1226799999999743221 1   2233444454    45555555555432     335655544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.91  E-value=0.001  Score=52.01  Aligned_cols=80  Identities=16%  Similarity=0.158  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|+|.|+ +|+|...+..+...|. +|+++++++++.+...+.      +........|  ..+.+.+..+...  .
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~------Ga~~~i~~~~--~~~~~~~~~~~~~--~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV------GATECVNPQD--YKKPIQEVLTEMS--N   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEEECGGG--CSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh------CCeeEEecCC--chhHHHHHHHHHh--c
Confidence            5899999999 6899999999999996 899999998876644321      2222221112  2233444444432  3


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|-+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            479999999994

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.0015  Score=50.57  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+|+|.|+ |+||...+..+-..|++++++++++++.+. .+++     +....   +|..+.+...       ...+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad~~---i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GADEV---VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCSEE---EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCcEE---EECchhhHHH-------HhcC
Confidence            5899999986 899999998888899998899998876543 3333     33222   3555554322       2234


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ++|++|.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999984

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.91  E-value=0.0087  Score=45.49  Aligned_cols=119  Identities=13%  Similarity=0.003  Sum_probs=68.6

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC---------EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV---------HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~---------~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..|.|+||+|.+|..++..|+..+.         +++...++.+.++.....+.... ......+...-.+.    +.  
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~--   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPK----VA--   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHH----HH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchh----hh--
Confidence            3799999999999999999998753         23334566666666665555432 22233332221111    11  


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                           +...|++|..+|....+.    +.-.+.+..|    ..+++.+.+.+.+.+   .+...|+++|..
T Consensus        78 -----~~~advViitaG~~~~pg----~~r~dl~~~N----~~i~~~~~~~i~k~a---~~~~~vivvsNP  132 (154)
T d1y7ta1          78 -----FKDADYALLVGAAPRKAG----MERRDLLQVN----GKIFTEQGRALAEVA---KKDVKVLVVGNP  132 (154)
T ss_dssp             -----TTTCSEEEECCCCCCCTT----CCHHHHHHHH----HHHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             -----cccccEEEeecCcCCCCC----CcHHHHHHHH----HHHHHHHHHHHHHhC---CCCcEEEEecCc
Confidence                 237899999999743321    1222333333    456666666665532   124567677653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.012  Score=44.33  Aligned_cols=119  Identities=16%  Similarity=0.149  Sum_probs=71.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHC-C--CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALR-G--VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+.|+||+|.+|.++|..|+.+ +  .++++.+..+. .+.....+.+......... ..+-.+.+.    ++       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~----~~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKG-FSGEDATPA----LE-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEE-ECSSCCHHH----HT-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcE-EEcCCCccc----cC-------
Confidence            5889999999999999988754 4  47999998653 4444445544321222222 223333222    22       


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                      .-|++|..+|....+.    +.-.+.++.|.    .+++.+.+.+.+..    .++.+|++|...-.
T Consensus        69 ~aDvvvitaG~~~k~g----~~R~dl~~~N~----~i~~~v~~~i~~~~----p~aivivvtNPvD~  123 (145)
T d2cmda1          69 GADVVLISAGVRRKPG----MDRSDLFNVNA----GIVKNLVQQVAKTC----PKACIGIITNPVNT  123 (145)
T ss_dssp             TCSEEEECCSCCCCTT----CCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSHHH
T ss_pred             CCCEEEECCCccCCCC----cchhhHHHHHH----HHHHHHHHHHHhhC----CCcEEEEccCCchH
Confidence            5699999999743321    23334455553    45555556655542    46678888875543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.83  E-value=0.00034  Score=54.57  Aligned_cols=102  Identities=19%  Similarity=0.155  Sum_probs=66.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-c
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-S  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-~  105 (319)
                      .++.+|||+||+||+|...+.-.-..|++|+.+++++++.+.+.+ +     +.....   |   .+   ....+... .
T Consensus        22 ~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-l-----Gad~vi---~---~~---~~~~~~~~~~   86 (167)
T d1tt7a2          22 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-L-----GASEVI---S---RE---DVYDGTLKAL   86 (167)
T ss_dssp             GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-H-----TCSEEE---E---HH---HHCSSCCCSS
T ss_pred             CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-h-----cccceE---e---cc---chhchhhhcc
Confidence            357789999999999999997777789999999998877665433 2     333222   1   11   11111111 1


Q ss_pred             -CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccc
Q 020927          106 -GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ  174 (319)
Q Consensus       106 -~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~  174 (319)
                       .+++|++|.+.|-.                        .+...+..+..       .|++|.++...+.
T Consensus        87 ~~~gvd~vid~vgg~------------------------~~~~~~~~l~~-------~G~iv~~G~~~g~  125 (167)
T d1tt7a2          87 SKQQWQGAVDPVGGK------------------------QLASLLSKIQY-------GGSVAVSGLTGGG  125 (167)
T ss_dssp             CCCCEEEEEESCCTH------------------------HHHHHHTTEEE-------EEEEEECCCSSCS
T ss_pred             cCCCceEEEecCcHH------------------------HHHHHHHHhcc-------CceEEEeeccCCC
Confidence             24689999888731                        22334444543       7899999887654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.83  E-value=0.0026  Score=48.29  Aligned_cols=84  Identities=18%  Similarity=0.129  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ++..=|+|.|.||.|.+|..+|+.|.+.|++|.+.+|+.....+...   .   +..+..+..++   ..+...+.++..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~---~~~~v~~~~~~---~~~~~v~~~~~~   75 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---A---NADVVIVSVPI---NLTLETIERLKP   75 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---T---TCSEEEECSCG---GGHHHHHHHHGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---h---hccccccccch---hhheeeeecccc
Confidence            44555789999999999999999999999999999998755433221   1   44555544443   345666666655


Q ss_pred             cCCCccEEEEccc
Q 020927          105 SGLPLNILINNAG  117 (319)
Q Consensus       105 ~~~~id~lv~nag  117 (319)
                      ...+=.+++..++
T Consensus        76 ~~~~~~iiiD~~S   88 (152)
T d2pv7a2          76 YLTENMLLADLTS   88 (152)
T ss_dssp             GCCTTSEEEECCS
T ss_pred             cccCCceEEEecc
Confidence            4322234444443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.82  E-value=0.0029  Score=49.23  Aligned_cols=78  Identities=12%  Similarity=0.136  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|+|.|+ |+||...+..+...|+ .|+++++++.+++.+.+ +     +.. ++  +|..+++ +.+.+.++  ..
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~-----Ga~-~~--i~~~~~~-~~~~i~~~--t~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-L-----GAT-HV--INSKTQD-PVAAIKEI--TD   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-H-----TCS-EE--EETTTSC-HHHHHHHH--TT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-c-----CCe-EE--EeCCCcC-HHHHHHHH--cC
Confidence            5889999987 8999999988888898 56677888877665433 2     321 22  2444433 33333433  23


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.++|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            579999999994

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.81  E-value=0.017  Score=43.05  Aligned_cols=115  Identities=16%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+.|.|| |.+|..++..|+.++.  ++++.+++++.++.....+....+ ..+......|.   ++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            4677897 8999999999999984  799999999888766666555322 22333333332   11           12


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ..|++|.++|....+..    .-.+.+..|    ..+++.+.+.+.+..    +++.++++|...
T Consensus        67 ~adivvitag~~~~~g~----~r~dl~~~N----~~I~~~i~~~i~~~~----p~aivivvtNPv  119 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPGE----TRLQLLGRN----ARVMKEIARNVSKYA----PDSIVIVVTNPV  119 (140)
T ss_dssp             TCSEEEECCCCCCCSSC----CHHHHHHHH----HHHHHHHHHHHHHHC----TTCEEEECSSSH
T ss_pred             CCCEEEEecccccCCCc----chhhhhccc----cchHHHHHHHHHhcC----CCcEEEEeCCcH
Confidence            67999999997443221    112333334    346667777776653    466777777643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.81  E-value=0.00071  Score=53.23  Aligned_cols=43  Identities=26%  Similarity=0.324  Sum_probs=37.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .++.++||+||+||+|...+.-.-..|++|+.+++++++.+..
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            4556899999999999999888888999999999998876543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.78  E-value=0.0033  Score=48.55  Aligned_cols=75  Identities=15%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++...+ +     +....+...+-.+   .   .   ....+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l-----Ga~~~i~~~~~~~---~---~---~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADHYIATLEEGD---W---G---EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEEEEGGGTSC---H---H---HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c-----CCcEEeeccchHH---H---H---Hhhhc
Confidence            6899999987 899999888877889999999999887665432 2     4332221122111   1   1   12334


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      .+|++|.+.|.
T Consensus        91 ~~d~vi~~~~~  101 (168)
T d1piwa2          91 TFDLIVVCASS  101 (168)
T ss_dssp             CEEEEEECCSC
T ss_pred             ccceEEEEecC
Confidence            78999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.76  E-value=0.0046  Score=48.25  Aligned_cols=80  Identities=18%  Similarity=0.175  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+.      +....+-.-|-.+.  .+.+.+..  ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~------GA~~~in~~~~~~~--~~~~~~~~--~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV------GATECISPKDSTKP--ISEVLSEM--TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH------TCSEEECGGGCSSC--HHHHHHHH--HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc------CCcEEECccccchH--HHHHHHHh--cc
Confidence            5899999986 8999999999999996 899999999887754433      43333322232221  22222222  13


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +++|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            479999999984

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.75  E-value=0.0013  Score=47.45  Aligned_cols=62  Identities=10%  Similarity=0.084  Sum_probs=44.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS   91 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   91 (319)
                      -.++++||++||.|++. +|..-++.|++.|++|++.+.......  ...+ .   ..++.++.-++..
T Consensus         6 i~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~~~--~~~~-~---~~~i~~~~~~~~~   67 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIPQF--TVWA-N---EGMLTLVEGPFDE   67 (113)
T ss_dssp             EEECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCHHH--HHHH-T---TTSCEEEESSCCG
T ss_pred             eEEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCChHH--HHHH-h---cCCceeeccCCCH
Confidence            34789999999999765 999999999999999998876543211  1111 1   3456666655543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.74  E-value=0.016  Score=44.96  Aligned_cols=120  Identities=12%  Similarity=-0.058  Sum_probs=69.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      .-.|.||||+|.||+.++..|++...       .+.+++...  +.++....++........-..+..  ++.   .+  
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~---~~--   96 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDP---YE--   96 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCH---HH--
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccc---hh--
Confidence            34699999999999999999997531       466666644  445555555544321111112111  221   11  


Q ss_pred             HHHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          100 SEFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                           .+...|++|..+|....+.    +...+.++.|    ..+++.+.+.+.+.+.   +...|+++|..
T Consensus        97 -----~~~~aDvVvi~ag~~rkpg----~tR~Dll~~N----~~I~k~~~~~i~~~a~---~~~~vlvv~NP  152 (175)
T d7mdha1          97 -----VFEDVDWALLIGAKPRGPG----MERAALLDIN----GQIFADQGKALNAVAS---KNVKVLVVGNP  152 (175)
T ss_dssp             -----HTTTCSEEEECCCCCCCTT----CCHHHHHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             -----hccCCceEEEeeccCCCCC----CcHHHHHHHH----HHHHHHHHHHHHhhCC---CCcEEEEecCc
Confidence                 2337899999999743322    2334455545    4566666666665321   24567667653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.72  E-value=0.004  Score=47.87  Aligned_cols=41  Identities=20%  Similarity=0.251  Sum_probs=35.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.+++|.|+ |++|...+..+...|.+|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            5889999886 9999999988888899999999998877644

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0041  Score=47.18  Aligned_cols=76  Identities=14%  Similarity=0.056  Sum_probs=58.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCcc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLN  110 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id  110 (319)
                      .++|.|. +.+|+.+++.|.++|..|++++.+++..........    ...+.++..|.++++.++++-      ....+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHhc------cccCC
Confidence            4777777 699999999999999999999998876555444443    346888999999998766652      22678


Q ss_pred             EEEEccc
Q 020927          111 ILINNAG  117 (319)
Q Consensus       111 ~lv~nag  117 (319)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8887765

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.69  E-value=0.00046  Score=55.47  Aligned_cols=44  Identities=23%  Similarity=0.301  Sum_probs=38.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .+++||+++|-| .|.+|+.+|+.|.+.|++|++.+.+...+...
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            369999999997 77799999999999999999999998776543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.60  E-value=0.036  Score=41.40  Aligned_cols=115  Identities=13%  Similarity=0.068  Sum_probs=70.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh--CCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKE--IPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+.|+|+ |.+|.++|..|+.+|.  ++++.+++++.++.....+.+.  +.+........|..+              .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~--------------~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI--------------C   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG--------------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH--------------h
Confidence            4677797 9999999999999995  7999999998877665556543  112111111222211              1


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ..-|++|..||....+. .   .-.+.+..|.    .+++.+.+.+.+..    .++.++++|...
T Consensus        68 ~daDvVVitaG~~~~~g-~---~R~dl~~~N~----~i~~~i~~~i~~~~----p~ai~ivvtNPv  121 (143)
T d1llda1          68 RDADMVVITAGPRQKPG-Q---SRLELVGATV----NILKAIMPNLVKVA----PNAIYMLITNPV  121 (143)
T ss_dssp             TTCSEEEECCCCCCCTT-C---CHHHHHHHHH----HHHHHHHHHHHHHC----TTSEEEECCSSH
T ss_pred             hCCcEEEEecccccCCC-C---chhhhhhhhH----HHHHHHHHHHHhhC----CCeEEEEeCCch
Confidence            25699999999743321 1   1223444443    55666666665542    356777777644

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.53  E-value=0.0093  Score=44.70  Aligned_cols=116  Identities=15%  Similarity=0.123  Sum_probs=70.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhC--CCCceEEE-EcCCCCHHHHHHHHHHHHhc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEI--PNAKVQAM-ELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~-~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      |+|.|.|+ |.+|.++|..|+.++. ++++++.+++..+.....+....  .+...... ..|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            46777796 9999999999999985 89999998877665555553211  01222222 222222              


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...-|++|.+||....+..    .-.+.+..|    ..+++.+.+.+.+..    .++.++++|...
T Consensus        67 ~~~advvvitag~~~~~~~----~r~dl~~~N----~~i~~~i~~~i~k~~----p~aivivvtNPv  121 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKPGM----SREDLIKVN----ADITRACISQAAPLS----PNAVIIMVNNPL  121 (142)
T ss_dssp             GTTCSEEEECCSCC-------------CHHHH----HHHHHHHHHHHGGGC----TTCEEEECSSSH
T ss_pred             hcCCCEEEEeeeccCCcCc----chhHHHhHH----HHHHHHHHHHHhccC----CCceEEEeCCch
Confidence            1257999999997543221    122334444    357788888877653    466777776644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.00089  Score=46.62  Aligned_cols=38  Identities=21%  Similarity=0.269  Sum_probs=33.6

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      +++||+++|.|. |.-|+++|+.|+++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            589999999998 56799999999999999999997543

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.49  E-value=0.0085  Score=44.94  Aligned_cols=115  Identities=17%  Similarity=0.152  Sum_probs=66.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCC-ceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEIPNA-KVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.|.|| |.+|..++..|+.++.  +|++.+++++.++.....+.+..+.. .......|   .+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------HhC
Confidence            4666687 9999999999999985  79999999887666555565432211 22222211   11           123


Q ss_pred             CccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          108 PLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       108 ~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ..|++|..||....+.    +.-.+.+..|.    .+++.+.+.+.+.+    .++.+|++|...
T Consensus        68 ~adivvitag~~~~~~----~~r~~l~~~N~----~i~~~i~~~i~~~~----p~ai~ivvtNPv  120 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPG----ETRLDLAKKNV----MIAKEVTQNIMKYY----NHGVILVVSNPV  120 (142)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHHC----CSCEEEECSSSH
T ss_pred             CCceEEEecccccCcC----cchhHHhhHHH----HHHHHHHHHhhccC----CCceEEEecChH
Confidence            6799999999643321    12233344443    55666666666542    356777777644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.49  E-value=0.0048  Score=47.78  Aligned_cols=78  Identities=15%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++...+.      +.. +++  |-.+ +.++...+..  ..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~------ga~-~~i--~~~~-~~~~~~~~~~--~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL------GAD-HVV--DARR-DPVKQVMELT--RG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT------TCS-EEE--ETTS-CHHHHHHHHT--TT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc------ccc-eee--cCcc-cHHHHHHHhh--CC
Confidence            5789999986 9999999988888886 788889998776544321      222 222  3222 3343333321  12


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      .++|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            369999999994

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.46  E-value=0.003  Score=49.22  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=54.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHH-HHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLA-SVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~v~~~~~~i~~  104 (319)
                      -.|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+ +     +....+   |..+.+ .+.+.....  
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~~~i---~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GATECL---NPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCcEEE---cCCCchhHHHHHHHHh--
Confidence            36899999986 8999999999999997 79999999888765533 2     322222   333322 133333322  


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                      ..+.+|++|-++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23479999999884

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.41  E-value=0.0055  Score=46.05  Aligned_cols=115  Identities=13%  Similarity=0.032  Sum_probs=72.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC--CCCceEEE-EcCCCCHHHHHHHHHHHHhc
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEI--PNAKVQAM-ELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~-~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+.|.|+ |.+|.++|..|+.+|.  ++++++++++.++.....+.+..  -....... .-|..+              
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------
Confidence            5778896 9999999999999984  79999999988776655565421  12222222 223221              


Q ss_pred             CCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          106 GLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       106 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...-|++|..+|....+.    ..-.+.+.    ....+++.+.+.+.+.+    .++.++++|...
T Consensus        67 ~~~adiVvitag~~~~~g----~~r~~l~~----~n~~i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKPG----MTRLDLAH----KNAGIIKDIAKKIVENA----PESKILVVTNPM  121 (142)
T ss_dssp             GTTCSEEEECCCCCCCSS----CCHHHHHH----HHHHHHHHHHHHHHTTS----TTCEEEECSSSH
T ss_pred             hccccEEEEeccccCCCC----CchHHHHH----HhhHHHHHHHHHHHhhC----CCcEEEEecCCh
Confidence            126799999999643321    11223333    33456666667666542    466777777744

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.41  E-value=0.0067  Score=46.49  Aligned_cols=41  Identities=17%  Similarity=0.177  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.++||.|+ |+||...+..+...|++|+++++++++.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999875 9999999888888999999999999887644

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.38  E-value=0.0044  Score=47.99  Aligned_cols=79  Identities=14%  Similarity=0.146  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|+|.|+ +|+|...+..+...|+ .|+.+++++++.+.. +++     +..-.+   |..+ .+.+.+.+++.  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~l-----Ga~~~i---~~~~~~~~~~~~~~~~--~   95 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF-----GATECI---NPQDFSKPIQEVLIEM--T   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH-----TCSEEE---CGGGCSSCHHHHHHHH--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHh-----CCcEEE---eCCchhhHHHHHHHHH--c
Confidence            5889999998 5899999999999997 688888887775543 333     322222   2221 23344444443  2


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|++|.++|.
T Consensus        96 ~~g~D~vid~~G~  108 (176)
T d2fzwa2          96 DGGVDYSFECIGN  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEeeecCCC
Confidence            3479999999984

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.32  E-value=0.014  Score=45.26  Aligned_cols=85  Identities=14%  Similarity=0.125  Sum_probs=57.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---------------HhhCCCCceEEEEcCCCCHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI---------------VKEIPNAKVQAMELDLSSLAS   94 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~---------------~~~~~~~~v~~~~~Dl~~~~~   94 (319)
                      +.|-|.|- |-+|.++|+.|++.|++|++++|++++.+++.+.-               .....  ....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~--~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK--KPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC--SSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc--ccceEEEecCchHH
Confidence            45667765 89999999999999999999999999888765431               11111  12334445666677


Q ss_pred             HHHHHHHHHhcCCCccEEEEccc
Q 020927           95 VRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        95 v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      +..+.+.+.....+=+++|....
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHhccccCcEEEecCc
Confidence            77777777665444456665554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0041  Score=49.28  Aligned_cols=45  Identities=27%  Similarity=0.274  Sum_probs=39.4

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK   75 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~   75 (319)
                      |+|.|.|| |-+|.++|..++..|+.|++.+++++.++...+.+.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            68999998 7799999999999999999999999888777666543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.30  E-value=0.0052  Score=47.86  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCC-HHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSS-LASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~i~~~  105 (319)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++...+ +     +... ++  |..+ ++.+....+...  
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~-----Ga~~-~i--~~~~~~~~~~~~~~~~~--   95 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L-----GATD-CL--NPRELDKPVQDVITELT--   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSE-EE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-h-----CCCc-cc--CCccchhhhhhhHhhhh--
Confidence            5789999975 9999999999999998 68889999877644332 2     3222 21  2222 122333333332  


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|++|-++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3489999999994

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.29  E-value=0.024  Score=42.27  Aligned_cols=116  Identities=20%  Similarity=0.133  Sum_probs=68.3

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC--CCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVKEI--PNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+.|+|| |.+|..++..|+..|.  +|++.+++++.++.....+....  ..........  .+.+.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4778896 8999999999999984  89999998877665544443321  1223333222  11111           2


Q ss_pred             CCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcc
Q 020927          107 LPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRR  172 (319)
Q Consensus       107 ~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~  172 (319)
                      ...|++|.++|....+..    .-.+.++.|.    .+++.+.+.+.+..    +++-++++|...
T Consensus        68 ~dadvvvitag~~~~~g~----~r~~l~~~N~----~i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1guza1          68 ANSDIVIITAGLPRKPGM----TREDLLMKNA----GIVKEVTDNIMKHS----KNPIIIVVSNPL  121 (142)
T ss_dssp             TTCSEEEECCSCCCCTTC----CHHHHHHHHH----HHHHHHHHHHHHHC----SSCEEEECCSSH
T ss_pred             cCCeEEEEEEecCCCCCC----chHHHHHHHH----HHHHHHHHHhhccC----CCeEEEEecCCh
Confidence            267999999997433211    1123333333    34555555555432    356677776643

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.011  Score=42.27  Aligned_cols=76  Identities=14%  Similarity=0.164  Sum_probs=58.2

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      .++...+.++.|.| +|-+|+-++....+.|+++++++.+++....          ..--.++..|+.|.+.+.++....
T Consensus         5 ~~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~   73 (111)
T d1kjqa2           5 TALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE   73 (111)
T ss_dssp             CTTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh
Confidence            44555677899999 6789999999999999999999987653221          112367789999999999888754


Q ss_pred             HhcCCCccEEEE
Q 020927          103 KSSGLPLNILIN  114 (319)
Q Consensus       103 ~~~~~~id~lv~  114 (319)
                           .+|++..
T Consensus        74 -----~~DviT~   80 (111)
T d1kjqa2          74 -----KPHYIVP   80 (111)
T ss_dssp             -----CCSEEEE
T ss_pred             -----CCceEEE
Confidence                 6788864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0023  Score=57.26  Aligned_cols=81  Identities=19%  Similarity=0.294  Sum_probs=56.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAME   86 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~~   86 (319)
                      |++..|||.|+ ||||.++++.|+..|. ++.+++.+                   ..+++.+.+.+.+.+|..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            57788999998 6799999999999998 79888632                   135666667777777777777776


Q ss_pred             cCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           87 LDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        87 ~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      .++.+..  ..+++       ..|++|.+..
T Consensus       114 ~~i~~~~--~~~~~-------~~DlVi~~~D  135 (426)
T d1yovb1         114 NKIQDFN--DTFYR-------QFHIIVCGLD  135 (426)
T ss_dssp             SCGGGBC--HHHHT-------TCSEEEECCS
T ss_pred             ccccchH--HHHHH-------hcchheeccC
Confidence            6665432  12222       5677776544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.14  E-value=0.031  Score=42.25  Aligned_cols=119  Identities=13%  Similarity=0.034  Sum_probs=66.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC-------EEEEEeCCH--HHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV-------HVVMAVRNM--AACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      ..|.|+||+|.+|..++..|+..+.       .+++.+.++  ..++....++.... ......+..- .+.   .+.  
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~---~~~--   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDVIAT-DKE---EIA--   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEEEEE-SCH---HHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-cccccccccC-ccc---ccc--
Confidence            4799999999999999999987542       477777644  34444444333322 1122221111 111   111  


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCc
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSR  171 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~  171 (319)
                           ....|++|..+|....+.+ +   -.+.++.|    ..+++.+.+.+.+..   +..+.+|.+|..
T Consensus        77 -----~~~~dvVVitag~~~~~g~-s---r~dll~~N----~~i~k~~~~~i~k~a---~~~~~iivvsNP  131 (154)
T d5mdha1          77 -----FKDLDVAILVGSMPRRDGM-E---RKDLLKAN----VKIFKCQGAALDKYA---KKSVKVIVVGNP  131 (154)
T ss_dssp             -----TTTCSEEEECCSCCCCTTC-C---TTTTHHHH----HHHHHHHHHHHHHHS---CTTCEEEECSSS
T ss_pred             -----cCCceEEEEecccCCCCCC-c---hhHHHHHh----HHHHHHHHHHHHhhC---CCceEEEEecCc
Confidence                 2378999999997544321 1   22334444    356666666665532   124456666653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.12  E-value=0.0077  Score=49.48  Aligned_cols=83  Identities=12%  Similarity=0.262  Sum_probs=60.1

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      +|++++|+|.| .||+|..+++.|+..|. +++++|.+                   ..+.+.+.+.+.+.+|..++..+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            37889999999 68899999999999998 79998621                   24677777778888777777777


Q ss_pred             EcCCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 020927           86 ELDLSSLASVRKFASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        86 ~~Dl~~~~~v~~~~~~i~~~~~~id~lv~nag  117 (319)
                      ...+.... ......       ..|++|.+..
T Consensus       106 ~~~~~~~~-~~~~~~-------~~divid~~d  129 (247)
T d1jw9b_         106 NALLDDAE-LAALIA-------EHDLVLDCTD  129 (247)
T ss_dssp             CSCCCHHH-HHHHHH-------TSSEEEECCS
T ss_pred             hhhhhhcc-cccccc-------ccceeeeccc
Confidence            65555432 333332       5677776543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.03  E-value=0.0084  Score=46.33  Aligned_cols=79  Identities=14%  Similarity=0.159  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHH-HHHHHHHHHhc
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLAS-VRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~i~~~  105 (319)
                      .|.+|+|.|+ +|+|...+..++..|. +|+.+++++++++...+ +     +..- ++  |..+++. +++......  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd~-~i--n~~~~~~~~~~~~~~~~--   95 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GATD-FV--NPNDHSEPISQVLSKMT--   95 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCCE-EE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCcE-EE--cCCCcchhHHHHHHhhc--
Confidence            6789999985 7788888888888887 79999999887765432 1     3222 22  3333222 223333221  


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+++|+++-++|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2479999999994

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.91  E-value=0.005  Score=48.48  Aligned_cols=45  Identities=24%  Similarity=0.160  Sum_probs=39.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVK   75 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~   75 (319)
                      |+|.|.|| |-+|.++|..++..|++|++.+++++.++...+.+..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~   49 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAK   49 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhh
Confidence            56888998 7799999999999999999999999988877666643

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.67  E-value=0.022  Score=43.94  Aligned_cols=40  Identities=30%  Similarity=0.245  Sum_probs=36.1

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~   62 (319)
                      ...+++||.++|.|-|.=+|+-++..|+++|++|..+.++
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            3458999999999999999999999999999999988654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.57  E-value=0.036  Score=43.85  Aligned_cols=78  Identities=19%  Similarity=0.146  Sum_probs=58.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      ..+++|++||=.|++.|.   ++..++..|+ +|+.++.++..++.+.+.+...  +.+..++..|+.+.          
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC----------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh----------
Confidence            456899999999998762   3334567786 8999999998888777666544  56788888886442          


Q ss_pred             HhcCCCccEEEEccccC
Q 020927          103 KSSGLPLNILINNAGIM  119 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~  119 (319)
                         .+++|++|.|..+.
T Consensus       107 ---~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---CCCCSEEEECCCCS
T ss_pred             ---CCcCcEEEEcCccc
Confidence               34899999998753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.48  E-value=0.0049  Score=46.62  Aligned_cols=37  Identities=11%  Similarity=0.153  Sum_probs=33.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeC
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVR   61 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r   61 (319)
                      .+.++||++||.|| |.+|..-++.|++.|++|++++.
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            46799999999999 55999999999999999988864

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.34  E-value=0.032  Score=44.07  Aligned_cols=72  Identities=24%  Similarity=0.168  Sum_probs=54.0

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++.||+||=.|+++|+   ++..++..|+ +|+.++.++..++.+.+.      -.++.++.+|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc-----------
Confidence            56899999999999873   3345777886 799999998776654432      34678889998542           


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                        .+++|++|.|..+
T Consensus       105 --~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --SGKYDTWIMNPPF  117 (197)
T ss_dssp             --CCCEEEEEECCCC
T ss_pred             --CCcceEEEeCccc
Confidence              3589999999764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.20  E-value=0.029  Score=42.67  Aligned_cols=39  Identities=23%  Similarity=0.224  Sum_probs=33.3

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKK   71 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~   71 (319)
                      |-|.| .|-+|.++|+.|+++|++|++.+|++++.+.+.+
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            55564 5899999999999999999999999988776654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.19  E-value=0.1  Score=39.59  Aligned_cols=84  Identities=12%  Similarity=0.073  Sum_probs=53.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh----------hCCCCceEEEEcCCCCHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGV--HVVMAVRNMAACREVKKAIVK----------EIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~~~~~~~~~~~~~----------~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      |+|+|.| .|-+|..+|+.|.+.|.  +|+..+++++..+...+.-.-          ......+.++.   ..++.+.+
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            3588887 59999999999999995  799999998877665443110          00011222222   23566777


Q ss_pred             HHHHHHhcCCCccEEEEccc
Q 020927           98 FASEFKSSGLPLNILINNAG  117 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag  117 (319)
                      +++++......=.+++..++
T Consensus        78 vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhcccccccccccccc
Confidence            77877765543344554444

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.03  E-value=0.099  Score=40.12  Aligned_cols=64  Identities=19%  Similarity=0.098  Sum_probs=47.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-----------CCCceEEEEcCCCCHH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-----------PNAKVQAMELDLSSLA   93 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----------~~~~v~~~~~Dl~~~~   93 (319)
                      ..|.+||..|++.|   ..+..||++|++|+.++.++..++.+.+......           .+..+.++..|+.+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            36889999998877   3777999999999999999998887766553321           0223566777776643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.92  E-value=0.18  Score=42.74  Aligned_cols=82  Identities=11%  Similarity=0.087  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCC-CchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           28 SGLTAIVTGAS-SGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        28 ~~k~vlItGas-~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .|++||=.|+. |+++.    .++..|+ +|+.++.++..++.+.+.+....-..++.++..|+.+      ....+...
T Consensus       145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            58899988876 44444    3456676 7999999999988887777665434578888888643      23344445


Q ss_pred             CCCccEEEEccccC
Q 020927          106 GLPLNILINNAGIM  119 (319)
Q Consensus       106 ~~~id~lv~nag~~  119 (319)
                      ..++|++|.++...
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            56899999998753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.61  E-value=0.2  Score=41.33  Aligned_cols=80  Identities=16%  Similarity=0.142  Sum_probs=56.6

Q ss_pred             CCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           29 GLTAIVTGASSG-IGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        29 ~k~vlItGas~g-IG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .++++-.|+++| |+.+++ +  ....+|++++.++.+++-+.+..+...-..++.+...|+.+.         ....++
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            355665665555 554443 2  245699999999999988888776654455788889998754         233456


Q ss_pred             CccEEEEccccCC
Q 020927          108 PLNILINNAGIMA  120 (319)
Q Consensus       108 ~id~lv~nag~~~  120 (319)
                      ++|++|.|..+..
T Consensus       179 ~fDlIVsNPPYI~  191 (271)
T d1nv8a_         179 SIEMILSNPPYVK  191 (271)
T ss_dssp             TCCEEEECCCCBC
T ss_pred             cccEEEEcccccC
Confidence            8999999998764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.57  E-value=0.016  Score=45.99  Aligned_cols=39  Identities=15%  Similarity=0.067  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      -++.||++.|.| .|.||+.+|+.|...|++|+..++...
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            458899999997 578999999999999999999986543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.56  E-value=0.023  Score=41.66  Aligned_cols=73  Identities=19%  Similarity=0.286  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEE-eCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMA-VRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      .+.|.|++|-.|+++++.+.++|..++.. +++...          ......   +..|++.++...+.++...+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            58999999999999999999999886544 443211          111223   456999999999999988765  56


Q ss_pred             cEEEEcccc
Q 020927          110 NILINNAGI  118 (319)
Q Consensus       110 d~lv~nag~  118 (319)
                      .+++-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            788888885

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.029  Score=42.92  Aligned_cols=41  Identities=34%  Similarity=0.408  Sum_probs=36.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      -..++.||+++|.|-+.-+|+-++..|.++|++|..+.+..
T Consensus        31 y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          31 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            34678999999999999999999999999999999886543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.47  E-value=0.018  Score=42.12  Aligned_cols=71  Identities=17%  Similarity=0.139  Sum_probs=50.9

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCc
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPL  109 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~i  109 (319)
                      |.++|.|. +.+|+.+++.|.  |..|++++.+++..+...        ...+.++.+|.++++.++++      ...+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~--------~~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL--------RSGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH--------HTTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH--------hcCccccccccCCHHHHHHh------hhhcC
Confidence            56788875 789999999994  556788888887665432        22577888999998776654      12366


Q ss_pred             cEEEEccc
Q 020927          110 NILINNAG  117 (319)
Q Consensus       110 d~lv~nag  117 (319)
                      +.+|....
T Consensus        64 ~~vi~~~~   71 (129)
T d2fy8a1          64 RAVIVNLE   71 (129)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEecc
Confidence            78876554

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.39  E-value=0.29  Score=36.32  Aligned_cols=79  Identities=13%  Similarity=0.133  Sum_probs=57.7

Q ss_pred             CCCCCEEEEeCCCCc-hhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGASSG-IGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas~g-IG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .++|+.+|=.|+++| +|.    +.+.+|+ +|+.++.+++.++.+.+.+.......++.++..|..+      .++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            478999998887765 444    4567787 7999999999988887777665445679999998533      222   


Q ss_pred             hcCCCccEEEEccc
Q 020927          104 SSGLPLNILINNAG  117 (319)
Q Consensus       104 ~~~~~id~lv~nag  117 (319)
                      ...++.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            23457999988754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.31  E-value=0.056  Score=39.82  Aligned_cols=76  Identities=13%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEE-EeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           31 TAIVTGASSGIGTETARVLALRG-VHVVM-AVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G-~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +|.|.|++|-+|+++++.+.+.. ..++. +++... +..    +...  +..   +..|++.++.+.+.++...+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            48899999999999999987764 56554 444321 111    1111  223   456999999999999888765  6


Q ss_pred             ccEEEEcccc
Q 020927          109 LNILINNAGI  118 (319)
Q Consensus       109 id~lv~nag~  118 (319)
                      +.++|-..|.
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            7788888885

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.028  Score=43.23  Aligned_cols=42  Identities=24%  Similarity=0.308  Sum_probs=37.5

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      ...+++||+++|.|.+.-+|+-++..|+++|++|.++.+...
T Consensus        33 ~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          33 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             hCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            346799999999999999999999999999999999976543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.021  Score=43.26  Aligned_cols=34  Identities=21%  Similarity=0.186  Sum_probs=31.0

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      ++|+|.|+ |.+|..++..|++.|++|.+++|++.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            36889988 99999999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.15  E-value=0.058  Score=43.53  Aligned_cols=48  Identities=21%  Similarity=0.228  Sum_probs=41.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      .-+++||+++|-| .|.+|..+|+.|.+.|++|+..+.+...++.....
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4569999999997 57899999999999999999999998877665544

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.13  E-value=0.43  Score=39.95  Aligned_cols=83  Identities=17%  Similarity=0.109  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ++++||=..+..|   +++..++..|++|+.++.+...++.+.+.+.... ...++.++..|+.+      .++...+..
T Consensus       132 ~~~rVLdlf~~tG---~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTG---VASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTC---HHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHHT
T ss_pred             CCCeEEEecCCCc---HHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhcC
Confidence            5778887766654   1333456789999999999999888777766542 23468899888643      344444445


Q ss_pred             CCccEEEEccccC
Q 020927          107 LPLNILINNAGIM  119 (319)
Q Consensus       107 ~~id~lv~nag~~  119 (319)
                      .+.|++|.+....
T Consensus       203 ~~fD~IilDPP~f  215 (309)
T d2igta1         203 STYDIILTDPPKF  215 (309)
T ss_dssp             CCBSEEEECCCSE
T ss_pred             CCCCEEEECCCcc
Confidence            5899999987643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.067  Score=40.66  Aligned_cols=41  Identities=22%  Similarity=0.289  Sum_probs=36.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA   65 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~   65 (319)
                      .+.+.||+++|.|= |-||+.+|+.|...|++|++++.++-+
T Consensus        19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            46689999999985 589999999999999999999999854

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.90  E-value=0.44  Score=40.11  Aligned_cols=83  Identities=18%  Similarity=0.147  Sum_probs=57.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+|++||=.++..| |.++  +++..+.+|+.++.++..++.+.+.+.... -.++.++..|..+.      .+.+....
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHhhh
Confidence            47899998887754 3333  344445689999999999888877776542 24688888886553      33344445


Q ss_pred             CCccEEEEccccC
Q 020927          107 LPLNILINNAGIM  119 (319)
Q Consensus       107 ~~id~lv~nag~~  119 (319)
                      .++|++|.+....
T Consensus       214 ~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         214 ERFDLVVLDPPAF  226 (318)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             cCCCEEEEcCCcc
Confidence            5899999998643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.90  E-value=0.052  Score=40.66  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=33.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRG-VHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~   72 (319)
                      .+.+.|+ |.+|.++++.|++.| .+|++.+|++++.+...++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            4667765 999999999999988 6899999999887765543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.09  Score=44.00  Aligned_cols=23  Identities=22%  Similarity=0.303  Sum_probs=20.6

Q ss_pred             CchhHHHHHHHHHCCCEEEEEeC
Q 020927           39 SGIGTETARVLALRGVHVVMAVR   61 (319)
Q Consensus        39 ~gIG~aia~~La~~G~~Vv~~~r   61 (319)
                      |..|.++|+.|..+|+.|+++.+
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHcCCEEEEEec
Confidence            47899999999999999999864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.86  E-value=0.46  Score=35.94  Aligned_cols=79  Identities=16%  Similarity=0.207  Sum_probs=58.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ....+++|.|| |-.|+.-++.....|+.|.+++.+.+.+++.....     ..++.++   .++.+.+.+.+.      
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~-----~~~~~~~---~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-----GSRVELL---YSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGSEEE---ECCHHHHHHHHH------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh-----cccceee---hhhhhhHHHhhc------
Confidence            45678999986 56788888999999999999999998887665544     2334443   456666665555      


Q ss_pred             CCccEEEEccccCCC
Q 020927          107 LPLNILINNAGIMAT  121 (319)
Q Consensus       107 ~~id~lv~nag~~~~  121 (319)
                       ..|++|.++-+.+.
T Consensus        95 -~aDivI~aalipG~  108 (168)
T d1pjca1          95 -EADLLIGAVLVPGR  108 (168)
T ss_dssp             -TCSEEEECCCCTTS
T ss_pred             -cCcEEEEeeecCCc
Confidence             67999999987544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.80  E-value=0.19  Score=38.34  Aligned_cols=40  Identities=25%  Similarity=0.243  Sum_probs=33.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKA   72 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~   72 (319)
                      |-|. |.|-+|.++|+.|++.|++|.+.+|++++.+.+.+.
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            3344 578999999999999999999999999988877654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.60  E-value=0.15  Score=42.89  Aligned_cols=76  Identities=11%  Similarity=0.085  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+||+||-.|++.|+   ++..+|+.|+ +|+.++.++.. ..+.+.........++.++..|+.+...          .
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            589999999999886   5667888897 79999988764 3444555454445689999999877421          2


Q ss_pred             CCCccEEEEcc
Q 020927          106 GLPLNILINNA  116 (319)
Q Consensus       106 ~~~id~lv~na  116 (319)
                      ..++|++|...
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            24789998754

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.57  E-value=0.36  Score=37.00  Aligned_cols=77  Identities=19%  Similarity=0.104  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+||=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+++..-..++.++.+|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            6788888988877   344556777789999999999999888888776434689999998422          222345


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7999998754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.37  E-value=0.25  Score=38.70  Aligned_cols=76  Identities=14%  Similarity=0.058  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      ++.+||=.|++.|.   ++..|++.|.+|+.++.+++.++.+.+.....  +..+.++..|..+..          ...+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCc
Confidence            34578999999876   66788899999999999998888777666554  456778888877632          1124


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ..|+++++..+
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            78999987654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.29  E-value=0.04  Score=43.12  Aligned_cols=39  Identities=31%  Similarity=0.309  Sum_probs=32.7

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      .|.|.||+ ..|.++|..|++.|.+|.+++|+++..+...
T Consensus         9 KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            58888865 5999999999999999999999987665543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.23  E-value=0.042  Score=42.55  Aligned_cols=33  Identities=18%  Similarity=0.206  Sum_probs=28.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      .|.|.|| |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            5677775 78999999999999999999998544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.22  E-value=0.058  Score=42.00  Aligned_cols=41  Identities=29%  Similarity=0.229  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA   65 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~   65 (319)
                      ...+.||++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            4568999999998 6899999999999999999999986543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.21  E-value=0.093  Score=39.69  Aligned_cols=39  Identities=13%  Similarity=0.008  Sum_probs=32.5

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVK   70 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~   70 (319)
                      +|-|. |.|-+|.++|++|+++|++|.+.+|+.++.+.+.
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            35555 5689999999999999999999999988766544

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.97  E-value=0.62  Score=32.75  Aligned_cols=82  Identities=10%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ||+|||.--..-+-..+...|-+.|++|+....+...+   .+.+++.  ...+..+-.++-+.+.+ ++++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~--~~dliilD~~mp~~~G~-e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL--KPDIVTMDITMPEMNGI-DAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH--CCSEEEEECSCGGGCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc--cCCEEEEecCCCCCCHH-HHHHHHHHhCCC
Confidence            78999999999999999999999999998776665433   3334343  33455555555554433 667777776666


Q ss_pred             ccEEEEcc
Q 020927          109 LNILINNA  116 (319)
Q Consensus       109 id~lv~na  116 (319)
                      +.+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77766654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.70  E-value=2.3  Score=35.38  Aligned_cols=110  Identities=14%  Similarity=0.059  Sum_probs=68.0

Q ss_pred             CCCCEEEEeCCCC-chhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC-CCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           27 GSGLTAIVTGASS-GIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIP-NAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        27 l~~k~vlItGas~-gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+|++||=..+.. +++.    .++..|+ .|+.++.++..++...+.+....- ..++.++..|+.      ..++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             hCCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            3688888776664 4443    3456787 799999999988877777654422 357889998874      3344445


Q ss_pred             hcCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhc
Q 020927          104 SSGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGK  154 (319)
Q Consensus       104 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~  154 (319)
                      ++..++|++|........    +..+....    ......|++.+++.++.
T Consensus       213 ~~~~~fD~Ii~DPP~f~~----~~~~~~~~----~~~~~~L~~~a~~ll~p  255 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFAR----NKKEVFSV----SKDYHKLIRQGLEILSE  255 (317)
T ss_dssp             HTTCCEEEEEECCCCC---------CCCCH----HHHHHHHHHHHHHTEEE
T ss_pred             hhcCCCCEEEEcChhhcc----chhHHHHH----HHHHHHHHHHHHHHcCC
Confidence            555689999999764332    22222222    12334466777776643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.64  E-value=0.3  Score=39.76  Aligned_cols=74  Identities=15%  Similarity=0.154  Sum_probs=54.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      ..|++||=.|+++|+   ++..+++.|.+|+.++.++..++.+.+..+..  +..+.++..|+.+      .   +  ..
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~------~---~--~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA------A---L--PF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH------H---G--GG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc------c---c--cc
Confidence            578999999999886   33456788999999999999988877766654  4456777776421      1   1  13


Q ss_pred             CCccEEEEcc
Q 020927          107 LPLNILINNA  116 (319)
Q Consensus       107 ~~id~lv~na  116 (319)
                      ++.|+++.|.
T Consensus       183 ~~fD~V~ani  192 (254)
T d2nxca1         183 GPFDLLVANL  192 (254)
T ss_dssp             CCEEEEEEEC
T ss_pred             cccchhhhcc
Confidence            4799999873

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.60  E-value=0.056  Score=49.31  Aligned_cols=58  Identities=14%  Similarity=0.123  Sum_probs=42.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCCceEEE
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRN-------------------MAACREVKKAIVKEIPNAKVQAM   85 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~v~~~   85 (319)
                      |.+.+|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+.+.+|..++.++
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~  100 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV  100 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence            56788999987 7899999999999997 78887531                   23555666666666665554443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.48  E-value=0.12  Score=40.08  Aligned_cols=37  Identities=30%  Similarity=0.282  Sum_probs=33.8

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+.||++.|.|.+. ||+.+++.+...|++|+.++|++
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence            48999999999765 99999999999999999999875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.39  E-value=0.097  Score=39.18  Aligned_cols=41  Identities=5%  Similarity=0.149  Sum_probs=33.9

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAI   73 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~   73 (319)
                      +.|. |+|-+|.++++.|.+.|++|++.+|+.++.++..+..
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4455 5789999999999999999999999988877665543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.10  E-value=0.12  Score=40.19  Aligned_cols=40  Identities=23%  Similarity=0.200  Sum_probs=35.0

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ...+++++++.|.| .|.||+++++.|...|.+|+..++..
T Consensus        38 ~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          38 HAYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TCCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            34578999999998 67899999999999999999999753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.10  E-value=0.15  Score=41.09  Aligned_cols=78  Identities=9%  Similarity=-0.047  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..+.+++||=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+.....  +.++.++..|+.+..           
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------
Confidence            45678899999999885   77889999999999999999888776665544  557889999986532           


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                      ..+++|++++..+.
T Consensus        98 ~~~~fD~i~~~~~~  111 (246)
T d1y8ca_          98 INRKFDLITCCLDS  111 (246)
T ss_dssp             CSCCEEEEEECTTG
T ss_pred             ccccccccceeeee
Confidence            12478999876553

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.09  E-value=0.4  Score=37.76  Aligned_cols=80  Identities=14%  Similarity=0.116  Sum_probs=58.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+||-.|+++|--.++..++.....+|+.++.+++.++...+.+.... -.++.++..|..+.-          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------cccc
Confidence            67899999998887666665556556699999999998888777765542 457778877765411          1124


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      .+|.++.+++.
T Consensus       144 ~fD~I~~~~~~  154 (213)
T d1dl5a1         144 PYDVIFVTVGV  154 (213)
T ss_dssp             CEEEEEECSBB
T ss_pred             chhhhhhhccH
Confidence            78999998875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.09  E-value=0.16  Score=39.10  Aligned_cols=39  Identities=23%  Similarity=0.061  Sum_probs=33.0

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ....++|.|+|.|| |.-|.+.|..|+++|++|+++.++.
T Consensus        38 ~~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          38 LPAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            34567899999986 5678999999999999999998764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.05  E-value=0.53  Score=35.72  Aligned_cols=127  Identities=9%  Similarity=0.060  Sum_probs=67.9

Q ss_pred             CEEEEeCCCCchhH--HHHHHHHHC----CCEEEEEeCCHHHHHHHHHHHHhhCC--CCceEEEEcCCCCHHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGT--ETARVLALR----GVHVVMAVRNMAACREVKKAIVKEIP--NAKVQAMELDLSSLASVRKFASE  101 (319)
Q Consensus        30 k~vlItGas~gIG~--aia~~La~~----G~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~  101 (319)
                      ..+.|.|| |.+|.  ++...|+..    +.+|+++++++++++.....+.+..+  +.......  -+|   .++.+. 
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td---~~eaL~-   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMN---LDDVII-   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESC---HHHHHT-
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCC---hhhccc-
Confidence            46788887 44554  455556643    35899999999887765544443211  22222221  122   222333 


Q ss_pred             HHhcCCCccEEEEccccCCCCc---------------ccCcccccchhh----hhhhHHHHHHHHHHHHHhcccccCCCC
Q 020927          102 FKSSGLPLNILINNAGIMATPF---------------MLSKDNIELQFA----TNHIGHFLLTNLLLETMGKTARESSKE  162 (319)
Q Consensus       102 i~~~~~~id~lv~nag~~~~~~---------------~~~~~~~~~~~~----vn~~~~~~l~~~~~~~l~~~~~~~~~~  162 (319)
                            ..|++|+.++......               ....... ....    ........+++.+.+.+.+..    ++
T Consensus        76 ------dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~-~~~g~~~~~~~~rn~~i~~~i~~~i~~~~----p~  144 (171)
T d1obba1          76 ------DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEF-NMVSDYYTFSNYNQLKYFVDIARKIEKLS----PK  144 (171)
T ss_dssp             ------TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTT-BCCTTCCSSSCHHHHHHHHHHHHHHHHHC----TT
T ss_pred             ------CCCeEeeecccccccceeeehhcchhhhhccCCCcccc-CCCCCcceeeecchHHHHHHHHHHHHHHC----cC
Confidence                  6899999988642210               0000000 0000    012345567777777777653    46


Q ss_pred             CeEEEeCCcccc
Q 020927          163 GRIVNVSSRRHQ  174 (319)
Q Consensus       163 ~~ii~isS~~~~  174 (319)
                      +-+|++|.....
T Consensus       145 a~~i~~TNPvdv  156 (171)
T d1obba1         145 AWYLQAANPIFE  156 (171)
T ss_dssp             CEEEECSSCHHH
T ss_pred             eEEEEECChHHH
Confidence            788888875544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.03  E-value=0.5  Score=33.11  Aligned_cols=35  Identities=23%  Similarity=0.184  Sum_probs=30.8

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            4588999875 6899999999999999999998875

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.00  E-value=0.27  Score=39.30  Aligned_cols=75  Identities=16%  Similarity=0.087  Sum_probs=57.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      -++++||=.|++.|   .++..|+++|++|+.++.+++.++.+.+.....  +.++.++..|+.+..           -.
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~  103 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FK  103 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------cc
Confidence            45678999999886   446778999999999999998888777766554  457899999986642           12


Q ss_pred             CCccEEEEccc
Q 020927          107 LPLNILINNAG  117 (319)
Q Consensus       107 ~~id~lv~nag  117 (319)
                      +..|.+++.-+
T Consensus       104 ~~fD~I~~~~~  114 (251)
T d1wzna1         104 NEFDAVTMFFS  114 (251)
T ss_dssp             SCEEEEEECSS
T ss_pred             cccchHhhhhh
Confidence            36898887643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.82  E-value=1.1  Score=32.50  Aligned_cols=87  Identities=9%  Similarity=0.051  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCC---CchhHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           28 SGLTAIVTGAS---SGIGTETARVLALRGVHVVMAVRNMAACR--EVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        28 ~~k~vlItGas---~gIG~aia~~La~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.|+|.|.|||   +..|..+++.|.+.|++|+.+........  .+...+.. . ...+..+. =+..++.+.++++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~d-l-p~~iD~v~-i~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLD-I-PDKIEVVD-LFVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGG-C-SSCCSEEE-ECSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccc-c-CccceEEE-EEeCHHHHHHHHHHH
Confidence            67999999999   68999999999999999998854322111  00000100 0 11122211 124567777888887


Q ss_pred             HhcCCCccEEEEccccC
Q 020927          103 KSSGLPLNILINNAGIM  119 (319)
Q Consensus       103 ~~~~~~id~lv~nag~~  119 (319)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  466788877753

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.61  E-value=0.31  Score=37.90  Aligned_cols=82  Identities=7%  Similarity=0.058  Sum_probs=60.4

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      +..+=+|-|+||...++++.+ . +.+|+.++++++.++...+.+...  +.++.++..++.+.+.+   +...  ..++
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~~   95 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIEK   95 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCSC
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCCC
Confidence            333445788888888888876 3 358999999999988777666443  56899999999885443   2222  1358


Q ss_pred             ccEEEEccccC
Q 020927          109 LNILINNAGIM  119 (319)
Q Consensus       109 id~lv~nag~~  119 (319)
                      +|.++...|+.
T Consensus        96 vdgIl~DlGvS  106 (192)
T d1m6ya2          96 VDGILMDLGVS  106 (192)
T ss_dssp             EEEEEEECSCC
T ss_pred             cceeeeccchh
Confidence            99999999974

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.49  E-value=0.11  Score=42.66  Aligned_cols=36  Identities=22%  Similarity=0.161  Sum_probs=32.6

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV   60 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~   60 (319)
                      ..+++||+++|.| .|.+|+.+++.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            4579999999999 68999999999999999988774

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.43  E-value=0.51  Score=37.29  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=60.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|.+||..|+++|--.++.-+|+  |.+|+.+.++++-.+...+.+... .-.++.++..|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~-g~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA-GVKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT-TCCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc-CCceeEEEECccccC----------CcccC
Confidence            67899999999999888888887  467999999987777666666554 246899999998641          11235


Q ss_pred             CccEEEEccccC
Q 020927          108 PLNILINNAGIM  119 (319)
Q Consensus       108 ~id~lv~nag~~  119 (319)
                      +.|.++.++++.
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999988864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.38  E-value=0.094  Score=41.08  Aligned_cols=40  Identities=18%  Similarity=0.125  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      ...+.||++.|.| .|.||+.+|+.|...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            4668999999996 578999999999999999999988543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.46  Score=33.89  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=30.2

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|+++|.||+ -||.++|..|++.|.+|.++.|++
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            5889999875 699999999999999999998864

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.16  Score=40.47  Aligned_cols=79  Identities=13%  Similarity=0.088  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------CCCCceEEEEcCCCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKE----------------IPNAKVQAMELDLSS   91 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~----------------~~~~~v~~~~~Dl~~   91 (319)
                      .|.+||..|.+.|   ..+..|+++|++|+.++-++..++.+.+.....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            7789999999877   457889999999999999998877665543221                113467788888765


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccc
Q 020927           92 LASVRKFASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        92 ~~~v~~~~~~i~~~~~~id~lv~nag~  118 (319)
                      ...         ...+..|+++....+
T Consensus       122 l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSST
T ss_pred             ccc---------cccCceeEEEEEEEE
Confidence            321         112356666655543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.03  E-value=0.41  Score=40.13  Aligned_cols=77  Identities=13%  Similarity=0.071  Sum_probs=54.3

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.+....-..++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            479999999999885   5567788897 7999998764 44444444444335679999999877421          2


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      ..++|++++..-
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            347899987643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.88  E-value=0.18  Score=36.16  Aligned_cols=36  Identities=28%  Similarity=0.198  Sum_probs=31.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .++|.++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888886 56999999999999999999998764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.73  E-value=0.17  Score=36.26  Aligned_cols=35  Identities=26%  Similarity=0.318  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+|+++|.|| |.+|.++|..|+++|.+|.++.+++
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3688888874 7899999999999999999998865

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.72  E-value=0.49  Score=35.82  Aligned_cols=79  Identities=20%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      +|+++|=.|+++|.   ++-..+.+|++|+.++.++..++.+.+.++...-+.++....+|        .+.........
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d--------~~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE--------VFLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH--------HHHHHHHHTTC
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh--------cccccccccCC
Confidence            67777777766552   33456678999999999999988887777665333333332222        12223333445


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      +.|+++.+..
T Consensus       110 ~fD~If~DPP  119 (171)
T d1ws6a1         110 RFTVAFMAPP  119 (171)
T ss_dssp             CEEEEEECCC
T ss_pred             ccceeEEccc
Confidence            7999998854

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.70  E-value=0.17  Score=40.82  Aligned_cols=36  Identities=31%  Similarity=0.383  Sum_probs=31.1

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHH-CCCEEEEEe
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLAL-RGVHVVMAV   60 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~-~G~~Vv~~~   60 (319)
                      ..+++|++++|-| .|.+|+.+++.|++ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            3578999999996 89999999999985 599988775

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.61  E-value=2.5  Score=31.60  Aligned_cols=77  Identities=10%  Similarity=0.113  Sum_probs=43.9

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHHHHh---hC-CCCceEEEEcCCCCHHHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALR-----GVHVVMAVRNMAACREVKKAIVK---EI-PNAKVQAMELDLSSLASVRKFA   99 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~-----G~~Vv~~~r~~~~~~~~~~~~~~---~~-~~~~v~~~~~Dl~~~~~v~~~~   99 (319)
                      ...+.|.||++.-...++..|+..     +.+|++.+.++++++.....+..   .. ...++.. ..|      ..+.+
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d------~~eal   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TTD------PEEAF   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ESC------HHHHH
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cCC------hhhcc
Confidence            445788888764333344454442     23799999999988754444433   21 1222222 222      22222


Q ss_pred             HHHHhcCCCccEEEEccccC
Q 020927          100 SEFKSSGLPLNILINNAGIM  119 (319)
Q Consensus       100 ~~i~~~~~~id~lv~nag~~  119 (319)
                      +       .-|++|+.+|..
T Consensus        76 ~-------~AD~Vvitag~~   88 (167)
T d1u8xx1          76 T-------DVDFVMAHIRVG   88 (167)
T ss_dssp             S-------SCSEEEECCCTT
T ss_pred             C-------CCCEEEECCCcC
Confidence            2       679999999974

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.53  E-value=0.15  Score=41.30  Aligned_cols=35  Identities=26%  Similarity=0.238  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV   60 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~   60 (319)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            579999999997 88999999999999999998776

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=90.35  E-value=0.52  Score=33.21  Aligned_cols=34  Identities=18%  Similarity=0.190  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578888875 6899999999999999999998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.21  E-value=0.58  Score=32.81  Aligned_cols=34  Identities=21%  Similarity=0.100  Sum_probs=29.3

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            46788876 47899999999999999999998864

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.04  E-value=0.88  Score=31.97  Aligned_cols=38  Identities=26%  Similarity=0.129  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ++-..+.++|.|| |-||.++|..|++.|.+|.++.++.
T Consensus        18 l~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          18 FQNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3445688999985 7899999999999999999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.92  E-value=0.27  Score=38.43  Aligned_cols=38  Identities=16%  Similarity=0.113  Sum_probs=32.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREV   69 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~   69 (319)
                      .|.|. |.|-+|..+|..|++.|++|++++.+++..+..
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            35666 678999999999999999999999998766554

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.66  E-value=3.2  Score=31.34  Aligned_cols=82  Identities=18%  Similarity=0.246  Sum_probs=59.6

Q ss_pred             CCCCCEEEEeCCC-CchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           26 DGSGLTAIVTGAS-SGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        26 ~l~~k~vlItGas-~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .+.|+++|=..|+ |.+|.+    .+.+|+ +|+.++.+...++.+.+.+.......++.++..|+.+      +++.+.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhc
Confidence            4688888877666 457764    566888 6999999999888888777665445578888888643      344544


Q ss_pred             hcCCCccEEEEccc
Q 020927          104 SSGLPLNILINNAG  117 (319)
Q Consensus       104 ~~~~~id~lv~nag  117 (319)
                      +...+.|+++....
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            45557999987764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.63  E-value=0.92  Score=35.88  Aligned_cols=81  Identities=19%  Similarity=0.106  Sum_probs=61.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC----CCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIP----NAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      .|.+||-.|.++|--.++..+++....+|+.++++++-++.+.+.+.+...    -.++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            578999999999988888888888778999999999988888777765422    246777888864311          


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                      ...+.+|.++.+++.
T Consensus       146 ~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             GGGCCEEEEEECSBB
T ss_pred             chhhhhhhhhhhcch
Confidence            123478999999885

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.56  E-value=0.76  Score=38.57  Aligned_cols=77  Identities=16%  Similarity=0.099  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      .+|++||-.|++.|+   ++..+++.|+ +|++++.++ .++.+.+......-..++.++..|+.+.+          -.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            479999999999874   4567788897 799999875 44444455555444568999999987642          11


Q ss_pred             CCCccEEEEccc
Q 020927          106 GLPLNILINNAG  117 (319)
Q Consensus       106 ~~~id~lv~nag  117 (319)
                      ..++|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            247899987654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.55  E-value=0.68  Score=32.79  Aligned_cols=35  Identities=20%  Similarity=0.147  Sum_probs=30.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..|.++|.|| |-||.++|..|++.|.+|.++.+++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3578888875 6899999999999999999998864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.50  E-value=0.19  Score=39.20  Aligned_cols=40  Identities=18%  Similarity=0.031  Sum_probs=34.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      ..++.||++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        42 ~~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            3568999999997 578999999999999999999987543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.45  E-value=0.17  Score=39.67  Aligned_cols=38  Identities=18%  Similarity=0.110  Sum_probs=33.8

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      -++.||++.|.| .|.||+.+++.|...|++|+..++..
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            468899999998 46799999999999999999999864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.36  E-value=0.2  Score=37.25  Aligned_cols=35  Identities=20%  Similarity=0.199  Sum_probs=28.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACR   67 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~   67 (319)
                      |-|. |.|.+|.++++.|+++|++|+..+++.+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            5555 4699999999999999999999987765544

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.31  E-value=1.2  Score=34.12  Aligned_cols=77  Identities=17%  Similarity=0.159  Sum_probs=56.0

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +.+.+||=.|++.|  . .+..|+++|++|+.++.++..++.+........ -.++.+...|+.+..-           .
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCCC-----------C
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheecccccc-----------c
Confidence            45568999988644  3 557889999999999999998887766655442 2457888888876431           1


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +..|+++++.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            368999876654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.30  E-value=0.2  Score=37.22  Aligned_cols=36  Identities=17%  Similarity=0.143  Sum_probs=29.4

Q ss_pred             CCCEEEEe-CCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVT-GASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlIt-Gas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      -++.++|. .+++-||.++|..|+++|.+|.++.+.+
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            34555554 4668999999999999999999998865

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.20  E-value=2.2  Score=31.62  Aligned_cols=75  Identities=11%  Similarity=-0.036  Sum_probs=42.6

Q ss_pred             EEEEeCCCCchhHHHHHH-HHHC-----CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           31 TAIVTGASSGIGTETARV-LALR-----GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~-La~~-----G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      .+.|.||++ +|...+-. |+..     +.+|++.+.++++++...+...... ........ - ++.   .+.++    
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~~~~~~~~-t-~~~---~~~l~----   70 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-KDRFKVLI-S-DTF---EGAVV----   70 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-TTSSEEEE-C-SSH---HHHHT----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-ccCceEEE-e-cCc---ccccC----
Confidence            478889865 56555533 2221     3479999999998775544433322 21222211 1 222   12222    


Q ss_pred             cCCCccEEEEccccC
Q 020927          105 SGLPLNILINNAGIM  119 (319)
Q Consensus       105 ~~~~id~lv~nag~~  119 (319)
                         ..|++|..+|..
T Consensus        71 ---~aDvVVita~~~   82 (162)
T d1up7a1          71 ---DAKYVIFQFRPG   82 (162)
T ss_dssp             ---TCSEEEECCCTT
T ss_pred             ---CCCEEEEecccC
Confidence               679999999974

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.16  E-value=0.26  Score=41.01  Aligned_cols=36  Identities=22%  Similarity=0.144  Sum_probs=32.4

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEe
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAV   60 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~   60 (319)
                      ..+++||+++|-|- |.+|+.+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            35789999999986 7999999999999999998885

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.07  E-value=0.72  Score=36.63  Aligned_cols=78  Identities=17%  Similarity=0.049  Sum_probs=54.7

Q ss_pred             CCC-CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDG-SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l-~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +++ .|.+||-.|+++|--.+   .|++.+.+|+.++++++..+.+.+.+. .  ..++.++..|..+-          .
T Consensus        66 L~l~~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g----------~  129 (224)
T d1vbfa_          66 LDLHKGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLG----------Y  129 (224)
T ss_dssp             TTCCTTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGC----------C
T ss_pred             hhhcccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhc----------c
Confidence            444 67889999998885444   456666799999999887776554332 2  45788888987541          1


Q ss_pred             hcCCCccEEEEcccc
Q 020927          104 SSGLPLNILINNAGI  118 (319)
Q Consensus       104 ~~~~~id~lv~nag~  118 (319)
                      ...++.|.++.++++
T Consensus       130 ~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         130 EEEKPYDRVVVWATA  144 (224)
T ss_dssp             GGGCCEEEEEESSBB
T ss_pred             hhhhhHHHHHhhcch
Confidence            123478999988875

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.06  E-value=0.12  Score=40.34  Aligned_cols=31  Identities=16%  Similarity=0.163  Sum_probs=27.4

Q ss_pred             CEEEEeCCCCchhHH-----HHHHHHHCCCEEEEEe
Q 020927           30 LTAIVTGASSGIGTE-----TARVLALRGVHVVMAV   60 (319)
Q Consensus        30 k~vlItGas~gIG~a-----ia~~La~~G~~Vv~~~   60 (319)
                      |.++|||.+.|+|+.     +|..|+++|.+|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999985     6788999999999975

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.93  E-value=0.18  Score=40.95  Aligned_cols=34  Identities=24%  Similarity=0.233  Sum_probs=28.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      +|+|+|.||+ -=|+..|.+|++.|++|+++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6889999865 457888999999999999998753

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.84  E-value=1.5  Score=33.43  Aligned_cols=78  Identities=23%  Similarity=0.141  Sum_probs=57.1

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEI-PNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      ..+++||=.|++.|   .++..|++.+.+|++++.++...+.+.+.+.... .+.++.++..|+.+.  +         .
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~---------~  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--V---------K  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--C---------T
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--h---------c
Confidence            46889999998877   3445677778899999999988887776665432 245689999998652  1         1


Q ss_pred             CCCccEEEEcccc
Q 020927          106 GLPLNILINNAGI  118 (319)
Q Consensus       106 ~~~id~lv~nag~  118 (319)
                      .+..|++++|..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            2379999998654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.73  E-value=0.65  Score=35.06  Aligned_cols=125  Identities=6%  Similarity=0.015  Sum_probs=61.9

Q ss_pred             EEEEeCCC-CchhHHHHHHHHHCC----CEEEEEeCCHHH--HHHHHHHHH---hhCCCCceEEEEcCCCCHHHHHHHHH
Q 020927           31 TAIVTGAS-SGIGTETARVLALRG----VHVVMAVRNMAA--CREVKKAIV---KEIPNAKVQAMELDLSSLASVRKFAS  100 (319)
Q Consensus        31 ~vlItGas-~gIG~aia~~La~~G----~~Vv~~~r~~~~--~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~v~~~~~  100 (319)
                      .+.|.||+ .|.+..++.-+....    .+|++.+.+++.  ++..-....   ... +..+..  ...+|.   .+.++
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~-~~~~~~--~~~td~---~~al~   76 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKA-GVPIEI--HLTLDR---RRALD   76 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHT-TCCCEE--EEESCH---HHHHT
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhc-CCCcee--eecCCc---hhhcC
Confidence            46777875 456666665555432    379999998754  332221111   111 212222  223343   12222


Q ss_pred             HHHhcCCCccEEEEccccCCCCcccCcccccchhh------------hhhhHHHHHHHHHHHHHhcccccCCCCCeEEEe
Q 020927          101 EFKSSGLPLNILINNAGIMATPFMLSKDNIELQFA------------TNHIGHFLLTNLLLETMGKTARESSKEGRIVNV  168 (319)
Q Consensus       101 ~i~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~------------vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~i  168 (319)
                             .-|++|+.+|+...+...-.+.+.....            ........+++.+.+.+.+..    +++-++++
T Consensus        77 -------gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~----pda~~i~v  145 (169)
T d1s6ya1          77 -------GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC----PDAWLINF  145 (169)
T ss_dssp             -------TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC----TTCEEEEC
T ss_pred             -------CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC----CCeEEEEe
Confidence                   6799999999753211100000000000            112334556677777776653    46677777


Q ss_pred             CCcc
Q 020927          169 SSRR  172 (319)
Q Consensus       169 sS~~  172 (319)
                      |...
T Consensus       146 tNPv  149 (169)
T d1s6ya1         146 TNPA  149 (169)
T ss_dssp             SSSH
T ss_pred             CChH
Confidence            7644

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=88.54  E-value=4.1  Score=31.11  Aligned_cols=142  Identities=11%  Similarity=-0.075  Sum_probs=78.2

Q ss_pred             CCCCEEEEeCCC--CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGAS--SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas--~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      ..|.+++|....  ...+.+++..|...|..++.+.-...                         .+   ...+...+ .
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~---~~~l~~~~-~   73 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CG---RDELAERL-R   73 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CC---HHHHHHHH-T
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cC---HHHHHHHh-h
Confidence            456666665443  34777888888888887766543321                         11   22233332 3


Q ss_pred             cCCCccEEEEccccCCCCcccCcccccchhhhhhhHHHHHHHHHHHHHhcccccCCCCCeEEEeCCcccccCCCCCCcCc
Q 020927          105 SGLPLNILINNAGIMATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD  184 (319)
Q Consensus       105 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~~~ii~isS~~~~~~~p~~~~~~  184 (319)
                      ..+.++.+|+-.+.......     ........+...+.++|.+...        ....++++++..+.... ++     
T Consensus        74 ~~~~~~~vv~l~~~~~~~~~-----~~~~~~~~~~~~l~l~qal~~~--------~~~~~l~~vT~~a~~~~-~~-----  134 (209)
T d2fr1a2          74 SVGEVAGVLSLLAVDEAEPE-----EAPLALASLADTLSLVQAMVSA--------ELGCPLWTVTESAVATG-PF-----  134 (209)
T ss_dssp             TSCCCSEEEECTTTTCCCCS-----SCGGGCHHHHHHHHHHHHHHHT--------TCCCCEEEEEESCSCSS-TT-----
T ss_pred             ccCCCCeEEEeCCCCCCCCc-----chhHHHHHHHHHHHHHHHHHhC--------CCCCcEEEEEcCCcccC-CC-----
Confidence            44578888888765322111     1111222345556666665432        12456776665332211 11     


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Q 020927          185 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSV  228 (319)
Q Consensus       185 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~g~~i~v~~v  228 (319)
                                ...-....+++.+|+++++.|+-.-.  ++...+
T Consensus       135 ----------d~~~~p~~A~l~Gl~r~~~~E~P~l~--~~~vDl  166 (209)
T d2fr1a2         135 ----------ERVRNAAHGALWGVGRVIALENPAVW--GGLVDV  166 (209)
T ss_dssp             ----------SCCSCGGGHHHHHHHHHHHHHCGGGE--EEEEEE
T ss_pred             ----------cccCCHhHHhHHHHHHHHHHhCCCce--EEEEEC
Confidence                      12335678999999999999986633  555554

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=88.44  E-value=1.7  Score=35.46  Aligned_cols=80  Identities=11%  Similarity=0.119  Sum_probs=57.2

Q ss_pred             CCCCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhc
Q 020927           27 GSGLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSS  105 (319)
Q Consensus        27 l~~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~  105 (319)
                      -++..+|=.|.+ |.||.++++.+  ...+|++++.++.+++.+.+.+.... -.++.+++.|+.+.-           .
T Consensus       107 ~~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~  172 (274)
T d2b3ta1         107 EQPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------A  172 (274)
T ss_dssp             SSCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------T
T ss_pred             ccccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------C
Confidence            345556666665 56666666553  24699999999999988877776653 246999999987642           1


Q ss_pred             CCCccEEEEccccCC
Q 020927          106 GLPLNILINNAGIMA  120 (319)
Q Consensus       106 ~~~id~lv~nag~~~  120 (319)
                      ..++|++|+|..+..
T Consensus       173 ~~~fDlIvsNPPYi~  187 (274)
T d2b3ta1         173 GQQFAMIVSNPPYID  187 (274)
T ss_dssp             TCCEEEEEECCCCBC
T ss_pred             CCceeEEEecchhhh
Confidence            248999999988754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.28  E-value=2.7  Score=30.92  Aligned_cols=42  Identities=24%  Similarity=0.256  Sum_probs=31.1

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC--CEEEEEe--CCHHHHHHHHH
Q 020927           30 LTAIVTGASSGIGTETARVLALRG--VHVVMAV--RNMAACREVKK   71 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G--~~Vv~~~--r~~~~~~~~~~   71 (319)
                      |++.|-|+||-||.....-+.++-  ++|+.++  +|-+.+.+...
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~   47 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL   47 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH
Confidence            579999999999999999888864  5776664  56554444433

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.26  E-value=0.18  Score=38.63  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=29.0

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~   63 (319)
                      +|+|+|.|| |-.|...|..|+++|+ .|.++.|+.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            678899985 6789999999999998 498988764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=88.22  E-value=1.1  Score=34.95  Aligned_cols=77  Identities=12%  Similarity=0.017  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .+++||=.|++.|.-   +..|+++|.+|+.++.+++.++.+.+.+.... ..++.++..|..+..-          ..+
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~~----------~~~   80 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMPF----------TDE   80 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCCS----------CTT
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccccc----------ccc
Confidence            358899999887743   46778899999999999988877655554432 4578999999877420          134


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      ..|+++++..+
T Consensus        81 ~fD~v~~~~~l   91 (231)
T d1vl5a_          81 RFHIVTCRIAA   91 (231)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccccccccccc
Confidence            78999988765

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=88.15  E-value=1.8  Score=31.24  Aligned_cols=34  Identities=26%  Similarity=0.182  Sum_probs=29.7

Q ss_pred             CCCEEEEeCCC---CchhHHHHHHHHHCCCEEEEEeC
Q 020927           28 SGLTAIVTGAS---SGIGTETARVLALRGVHVVMAVR   61 (319)
Q Consensus        28 ~~k~vlItGas---~gIG~aia~~La~~G~~Vv~~~r   61 (319)
                      +.|++.|.|||   +..|..+++.|.+.|++++.+--
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~   48 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence            57899999999   57999999999999999877643

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.13  E-value=1.1  Score=33.10  Aligned_cols=84  Identities=14%  Similarity=0.060  Sum_probs=53.4

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC----CceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPN----AKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      |-+.|- |-+|.++|++|++.|+.+ +..|+.++..+..+........    .....+...+.+.+.+......+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            455554 899999999999988755 5778777766665544221100    1233344556677788888887766554


Q ss_pred             CccEEEEccc
Q 020927          108 PLNILINNAG  117 (319)
Q Consensus       108 ~id~lv~nag  117 (319)
                      +-.++|.++-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5555555544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=88.12  E-value=0.37  Score=38.19  Aligned_cols=34  Identities=29%  Similarity=0.450  Sum_probs=28.8

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|.|+|.|| |-.|.++|..|+++|.+|.+++|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456888875 6789999999999999999999853

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.01  E-value=1  Score=31.85  Aligned_cols=33  Identities=36%  Similarity=0.372  Sum_probs=28.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~   62 (319)
                      .+.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            467888875 789999999999999999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.90  E-value=0.16  Score=41.99  Aligned_cols=36  Identities=25%  Similarity=0.244  Sum_probs=30.2

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      -+.|.|+|.||+ --|...|..|+++|.+|+++.+++
T Consensus        28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356889999876 458899999999999999998764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.88  E-value=1.2  Score=30.83  Aligned_cols=35  Identities=20%  Similarity=0.153  Sum_probs=29.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+|.++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            357788876 57899999999999999999998754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=87.71  E-value=0.58  Score=35.14  Aligned_cols=41  Identities=17%  Similarity=0.187  Sum_probs=36.3

Q ss_pred             CCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHH
Q 020927           24 GIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAA   65 (319)
Q Consensus        24 ~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~   65 (319)
                      .+-+.||+++|.|= |-+|+++|.+|...|++|+++..++-.
T Consensus        18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            35689999999974 679999999999999999999999854

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=87.68  E-value=2.4  Score=29.44  Aligned_cols=81  Identities=15%  Similarity=0.280  Sum_probs=54.5

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCC
Q 020927           29 GLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLP  108 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~  108 (319)
                      ||+|||.--...+-..+.+.|...|++|.......+.+    +.+.+.  ...+.++-..+-+.+.+ ++++++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal----~~~~~~--~~dlillD~~mP~~~G~-el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQAL----DIVTKE--RPDLVLLDMKIPGMDGI-EILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHH--CCSEEEEESCCTTCCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHH----HHHHhC--CCCEEEEeccCCCCCHH-HHHHHHHHhCCC
Confidence            68899999999999999999999999988665444333    333333  33455555555555443 567777776656


Q ss_pred             ccEEEEcc
Q 020927          109 LNILINNA  116 (319)
Q Consensus       109 id~lv~na  116 (319)
                      +-+++..+
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            66666654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.12  E-value=3.4  Score=28.69  Aligned_cols=84  Identities=17%  Similarity=0.145  Sum_probs=49.3

Q ss_pred             CEEEEeCCC---CchhHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           30 LTAIVTGAS---SGIGTETARVLALRGVHVVMAVRNMAACR--EVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        30 k~vlItGas---~gIG~aia~~La~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .....+. +. ...+..+. =....+.+.++++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~-~l-p~~~D~vv-i~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVR-EL-PKDVDVIV-FVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGG-GS-CTTCCEEE-ECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccch-hc-cccceEEE-EEeCHHHHHHHHHHHHh
Confidence            789999999   56899999999999999888754322110  0000000 00 11222211 12456667777777765


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            4  35566666664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.04  E-value=0.39  Score=38.10  Aligned_cols=38  Identities=26%  Similarity=0.300  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..-.+|.|+|.||+ --|...|..|+++|++|.++.++.
T Consensus        45 ~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          45 QTKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            34578999999975 458999999999999999997644

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=86.98  E-value=0.4  Score=33.78  Aligned_cols=35  Identities=31%  Similarity=0.389  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+|.++|.| +|-||.++|..|++.|.+|.++.|.+
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            478888887 47899999999999999999998764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.69  E-value=0.17  Score=35.26  Aligned_cols=41  Identities=15%  Similarity=0.058  Sum_probs=32.8

Q ss_pred             ccCCCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           22 TQGIDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        22 ~~~~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ...-+++||+|+|.|++ --|..+|..|+..+.++++..|..
T Consensus        25 ~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          25 REPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             cchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            34456899999999977 667889999999888877777654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.12  E-value=1.4  Score=31.11  Aligned_cols=35  Identities=26%  Similarity=0.194  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ..|.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4588999875 7899999999999999999998875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=85.99  E-value=1.9  Score=34.90  Aligned_cols=78  Identities=10%  Similarity=0.052  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+||=.|++.|.   ++..|+++ |.+|+.++-++..++.+.+......-..++.++.+|..+..-          ..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence            57899999988662   45556654 789999999998888777776666445689999999876310          22


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +.+|+++++-.+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            478999876554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.68  E-value=1.6  Score=30.29  Aligned_cols=35  Identities=17%  Similarity=0.167  Sum_probs=27.4

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHC---CCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALR---GVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~---G~~Vv~~~r~~   63 (319)
                      .+++++|.|| |.+|.++|..|.+.   |.+|.++.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            3688999987 89999999766654   45799988753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.68  E-value=0.99  Score=32.32  Aligned_cols=77  Identities=17%  Similarity=0.158  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCC-ch---------hHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHH
Q 020927           28 SGLTAIVTGASS-GI---------GTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRK   97 (319)
Q Consensus        28 ~~k~vlItGas~-gI---------G~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   97 (319)
                      ..|.|||.|++. -|         +...+++|.+.|++++++..|++....-.+.      ..++.+   .=-..+++.+
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~------aD~lYf---ePlt~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM------ADATYI---EPIHWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG------SSEEEC---SCCCHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh------cceeee---ecCCHHHHHH
Confidence            458899999874 33         3567888999999999999888654321110      234444   4445667777


Q ss_pred             HHHHHHhcCCCccEEEEcccc
Q 020927           98 FASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        98 ~~~~i~~~~~~id~lv~nag~  118 (319)
                      +++.-     ++|.++...|.
T Consensus        77 Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHH-----CCSEEECSSSH
T ss_pred             HHHHh-----CcCCeEEEeee
Confidence            77653     89999888774

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.64  E-value=2  Score=34.46  Aligned_cols=77  Identities=13%  Similarity=0.197  Sum_probs=57.6

Q ss_pred             CCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSG-IGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .|.+||=.|+++| +...+|+.+... .+|+.++++++.++.+.+.+.+.....++.+...|+.+.-           ..
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence            6789999999866 456666665443 4999999999999888888876555678999999987631           12


Q ss_pred             CCccEEEEcc
Q 020927          107 LPLNILINNA  116 (319)
Q Consensus       107 ~~id~lv~na  116 (319)
                      ..+|.++.+.
T Consensus       153 ~~fD~V~ld~  162 (250)
T d1yb2a1         153 QMYDAVIADI  162 (250)
T ss_dssp             CCEEEEEECC
T ss_pred             ceeeeeeecC
Confidence            3689988753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.50  E-value=0.43  Score=38.05  Aligned_cols=36  Identities=28%  Similarity=0.163  Sum_probs=29.4

Q ss_pred             CCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           27 GSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        27 l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ...++|+|.||+ --|..+|..|+++|.+|+++.|++
T Consensus         2 ~~~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356779999874 567788889999999999998864

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.48  E-value=0.41  Score=39.81  Aligned_cols=33  Identities=21%  Similarity=0.253  Sum_probs=23.9

Q ss_pred             CEEEEeCCCCc--h--hHHHHHHHHHCCCEEEEEeCC
Q 020927           30 LTAIVTGASSG--I--GTETARVLALRGVHVVMAVRN   62 (319)
Q Consensus        30 k~vlItGas~g--I--G~aia~~La~~G~~Vv~~~r~   62 (319)
                      |+|||++|+.|  +  ..+|+++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777665544  2  347999999999999887654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.60  E-value=0.38  Score=35.86  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=28.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC--EEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV--HVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~--~Vv~~~r~~   63 (319)
                      .||+|+|.||+ -.|.++|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999875 568999999999884  788887654

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.43  E-value=0.44  Score=37.49  Aligned_cols=35  Identities=20%  Similarity=0.269  Sum_probs=30.1

Q ss_pred             CCCEEEEeCCCCchhHH-----HHHHHHHCCCEEEEEeCC
Q 020927           28 SGLTAIVTGASSGIGTE-----TARVLALRGVHVVMAVRN   62 (319)
Q Consensus        28 ~~k~vlItGas~gIG~a-----ia~~La~~G~~Vv~~~r~   62 (319)
                      .||+|.|+|+-||+|+.     +|..|+++|.+|++++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            37899999999999974     678888999999999854

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.08  E-value=0.58  Score=39.09  Aligned_cols=35  Identities=23%  Similarity=0.245  Sum_probs=28.9

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      ++|.|+|.||+ --|..+|..|+++|.+|.++.++.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            47889999875 457788899999999999998654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.99  E-value=2.3  Score=34.33  Aligned_cols=74  Identities=9%  Similarity=0.064  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCC-CchhHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGAS-SGIGTETARVLALRG-VHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas-~gIG~aia~~La~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      -.|.+||-.||+ |.++..+|    ++| .+|+.++.|+...+.+.+.++...-..++.++..|..+..           
T Consensus       106 ~~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~-----------  170 (260)
T d2frna1         106 KPDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----------  170 (260)
T ss_dssp             CTTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------
T ss_pred             CCccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc-----------
Confidence            368999999988 45555444    445 4899999999998877777766533567999999986531           


Q ss_pred             cCCCccEEEEc
Q 020927          105 SGLPLNILINN  115 (319)
Q Consensus       105 ~~~~id~lv~n  115 (319)
                      ..+..|.+|.+
T Consensus       171 ~~~~~D~Ii~~  181 (260)
T d2frna1         171 GENIADRILMG  181 (260)
T ss_dssp             CCSCEEEEEEC
T ss_pred             cCCCCCEEEEC
Confidence            12468988875

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.87  E-value=0.44  Score=37.08  Aligned_cols=31  Identities=19%  Similarity=0.205  Sum_probs=26.7

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      |+|.| +|--|...|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78887 56778999999999999999998764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.78  E-value=1  Score=33.68  Aligned_cols=84  Identities=11%  Similarity=0.137  Sum_probs=53.8

Q ss_pred             CEEEEeCCCCchhHHHHHHHHHCC-CEEEEE-eCCHHH-HHHHHHHH--------------HhhCCCCceEEEEcCCCCH
Q 020927           30 LTAIVTGASSGIGTETARVLALRG-VHVVMA-VRNMAA-CREVKKAI--------------VKEIPNAKVQAMELDLSSL   92 (319)
Q Consensus        30 k~vlItGas~gIG~aia~~La~~G-~~Vv~~-~r~~~~-~~~~~~~~--------------~~~~~~~~v~~~~~Dl~~~   92 (319)
                      -.|.|.|++|-+|+++++.+.+.. ..|+.. +|.... ......++              ...  -... -+..|++.+
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~--~~~~-DViIDFs~p   81 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAV--KDDF-DVFIDFTRP   81 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTT--TTSC-SEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHH--hccc-ceEEEeccH
Confidence            368999999999999999998874 465443 443211 00000000              000  0011 145799999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccc
Q 020927           93 ASVRKFASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        93 ~~v~~~~~~i~~~~~~id~lv~nag~  118 (319)
                      +...+.++...+.  ++.+++-..|.
T Consensus        82 ~~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          82 EGTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHHhc--cceeEEecCCC
Confidence            9999998877665  68899988885

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=83.66  E-value=1.8  Score=34.44  Aligned_cols=79  Identities=10%  Similarity=0.028  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      +|++||=.|++.|   ..+..|++.|. +|+.++.+++.++.+.+.........++.++.+|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            5788999998876   23456777776 7999999999888877666554435579999999854311         012


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      +..|+++++-++
T Consensus        92 ~~fD~V~~~~~l  103 (252)
T d1ri5a_          92 KEFDVISSQFSF  103 (252)
T ss_dssp             SCEEEEEEESCG
T ss_pred             ccceEEEEccee
Confidence            368998887665

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.63  E-value=2.1  Score=32.57  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=49.4

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 020927           37 ASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGLPLNILINNA  116 (319)
Q Consensus        37 as~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~~id~lv~na  116 (319)
                      ||-|-|-. .+.+++++.+|+.++|++...+.+...    . ..++.++..++++.+..   +...  ..+++|.++..-
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~----~-~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DL   93 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL----H-LPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADL   93 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT----C-CTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEEC
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc----c-ccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEc
Confidence            44444433 456667777999999999887654331    1 45799999998885443   3332  235899999999


Q ss_pred             ccCC
Q 020927          117 GIMA  120 (319)
Q Consensus       117 g~~~  120 (319)
                      |+..
T Consensus        94 GvSs   97 (182)
T d1wg8a2          94 GVSS   97 (182)
T ss_dssp             SCCH
T ss_pred             cCCH
Confidence            9753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.63  E-value=0.7  Score=33.29  Aligned_cols=35  Identities=23%  Similarity=0.240  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .+|+++|.| +|-+|.++|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            468888886 57899999999999999999998764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=83.51  E-value=0.45  Score=38.37  Aligned_cols=31  Identities=26%  Similarity=0.273  Sum_probs=27.1

Q ss_pred             EEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           32 AIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        32 vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777764 6889999999999999999999864

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=83.51  E-value=3  Score=32.76  Aligned_cols=80  Identities=13%  Similarity=0.060  Sum_probs=57.4

Q ss_pred             CCC-CCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHH
Q 020927           25 IDG-SGLTAIVTGASSGIGTETARVLALR-GVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEF  102 (319)
Q Consensus        25 ~~l-~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i  102 (319)
                      +.+ .|++||=.|++.|   .++..|+++ |.+|+.++-++..++...+.......+.++.++..|+.+..         
T Consensus        29 ~~l~pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~---------   96 (245)
T d1nkva_          29 LRMKPGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV---------   96 (245)
T ss_dssp             TCCCTTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC---------
T ss_pred             cCCCCCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc---------
Confidence            444 4788998988766   345566664 78999999999888877666655544568999999987631         


Q ss_pred             HhcCCCccEEEEcccc
Q 020927          103 KSSGLPLNILINNAGI  118 (319)
Q Consensus       103 ~~~~~~id~lv~nag~  118 (319)
                        ..+++|.+++.-.+
T Consensus        97 --~~~~fD~v~~~~~~  110 (245)
T d1nkva_          97 --ANEKCDVAACVGAT  110 (245)
T ss_dssp             --CSSCEEEEEEESCG
T ss_pred             --ccCceeEEEEEehh
Confidence              12478988877654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.45  E-value=1.2  Score=34.69  Aligned_cols=80  Identities=9%  Similarity=0.081  Sum_probs=54.1

Q ss_pred             CCC-CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHH
Q 020927           25 IDG-SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFK  103 (319)
Q Consensus        25 ~~l-~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~  103 (319)
                      +.+ .|.+||=.|++.|.-...+..+...| +|+.++.++..++.+.+..+.   ..++.++..|..++.....      
T Consensus        52 l~lkpg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~---~~ni~~i~~d~~~~~~~~~------  121 (209)
T d1nt2a_          52 LKLRGDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE---RNNIIPLLFDASKPWKYSG------  121 (209)
T ss_dssp             CCCCSSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH---CSSEEEECSCTTCGGGTTT------
T ss_pred             CCCCCCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc---cCCceEEEeeccCcccccc------
Confidence            444 47899999999875443333333444 899999999988877666544   3478999999888655322      


Q ss_pred             hcCCCccEEEEc
Q 020927          104 SSGLPLNILINN  115 (319)
Q Consensus       104 ~~~~~id~lv~n  115 (319)
                       .+..+|++++.
T Consensus       122 -~~~~vd~v~~~  132 (209)
T d1nt2a_         122 -IVEKVDLIYQD  132 (209)
T ss_dssp             -TCCCEEEEEEC
T ss_pred             -ccceEEEEEec
Confidence             22356766654

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=83.34  E-value=5.2  Score=30.04  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCC-chhHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh
Q 020927           27 GSGLTAIVTGASS-GIGTETARVLALRGV-HVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS  104 (319)
Q Consensus        27 l~~k~vlItGas~-gIG~aia~~La~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~  104 (319)
                      +.++++|=.+|++ .+|.    +.+.+|+ +|++++.+...++.+.+.+.... -.++..+..|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~~-~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATLK-AGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHTT-CCSEEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhcc-ccceeeeeeccc---------ccccc
Confidence            6788888776664 4444    4567898 79999999999888877776543 346777777732         23333


Q ss_pred             cCCCccEEEEcccc
Q 020927          105 SGLPLNILINNAGI  118 (319)
Q Consensus       105 ~~~~id~lv~nag~  118 (319)
                      ...+.|+++....+
T Consensus       108 ~~~~fDlIf~DPPY  121 (183)
T d2fpoa1         108 KGTPHNIVFVDPPF  121 (183)
T ss_dssp             CCCCEEEEEECCSS
T ss_pred             cccccCEEEEcCcc
Confidence            45578999988653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.24  E-value=0.9  Score=34.85  Aligned_cols=38  Identities=18%  Similarity=0.161  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           25 IDGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        25 ~~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .++.++++.|.| .|.||+.+++.+...|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            468999999994 78999999999999999999999764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.23  E-value=0.38  Score=39.26  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=29.1

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~   64 (319)
                      .|+|.||+ -.|+.+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888876 8899999999999999999998764

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=82.96  E-value=1.3  Score=34.63  Aligned_cols=79  Identities=13%  Similarity=0.116  Sum_probs=57.0

Q ss_pred             CCCEEEEeCCCCc-hhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcC
Q 020927           28 SGLTAIVTGASSG-IGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSG  106 (319)
Q Consensus        28 ~~k~vlItGas~g-IG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~  106 (319)
                      .+.+||=.|++.| +...+++++...+++|+.++.+++-++.+.+.+.......++.+...|..+.            .+
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~------------~~  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV------------EI  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC------------CC
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc------------cc
Confidence            4678888888754 4566666655678899999999999988887777665566788887786543            12


Q ss_pred             CCccEEEEcccc
Q 020927          107 LPLNILINNAGI  118 (319)
Q Consensus       107 ~~id~lv~nag~  118 (319)
                      ...|+++++...
T Consensus       107 ~~~d~i~~~~~l  118 (225)
T d1im8a_         107 KNASMVILNFTL  118 (225)
T ss_dssp             CSEEEEEEESCG
T ss_pred             ccceeeEEeeec
Confidence            356777766553

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.80  E-value=1.7  Score=34.90  Aligned_cols=85  Identities=15%  Similarity=0.126  Sum_probs=59.5

Q ss_pred             CCEEEEeCCC-CchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHh-cC
Q 020927           29 GLTAIVTGAS-SGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKS-SG  106 (319)
Q Consensus        29 ~k~vlItGas-~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~-~~  106 (319)
                      ...+|=.|.+ |.|+..+++++-  +.+++.++.++++++-+.+.++...-..++..+..|..+.     +...+.. ..
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~~--~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~-----~~~~~~~~~~  134 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTL-----LMDALKEESE  134 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCS-----STTTSTTCCS
T ss_pred             cceEEEeCCCchHHHHHHHHhCC--CccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHh-----hhhhhhhccc
Confidence            4567777766 669999988874  6899999999999988877776654456788877665332     1111111 23


Q ss_pred             CCccEEEEccccCC
Q 020927          107 LPLNILINNAGIMA  120 (319)
Q Consensus       107 ~~id~lv~nag~~~  120 (319)
                      +++|++|+|..+..
T Consensus       135 ~~fD~ivsNPPY~~  148 (250)
T d2h00a1         135 IIYDFCMCNPPFFA  148 (250)
T ss_dssp             CCBSEEEECCCCC-
T ss_pred             CceeEEEecCcccc
Confidence            47999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.80  E-value=0.87  Score=32.42  Aligned_cols=37  Identities=16%  Similarity=0.106  Sum_probs=31.2

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      +-..+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            335688999985 7899999999999999999997753

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.78  E-value=0.59  Score=35.69  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=26.9

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCCH
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRNM   63 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~~   63 (319)
                      .|.|.||||-+|.++++.|+++-. +|..+..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            588999999999999999998764 666665443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=82.66  E-value=1.6  Score=32.10  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=30.7

Q ss_pred             CCEEEEeCCCCchhHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Q 020927           29 GLTAIVTGASSGIGTETARVLALR--GVHVVMAV--RNMAACRE   68 (319)
Q Consensus        29 ~k~vlItGas~gIG~aia~~La~~--G~~Vv~~~--r~~~~~~~   68 (319)
                      .|++.|-|+||-||.....-+.+.  .++|++++  +|-+.+.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~   45 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLAD   45 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHH
Confidence            589999999999999999888775  46777764  55544443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.21  E-value=0.47  Score=38.13  Aligned_cols=32  Identities=25%  Similarity=0.282  Sum_probs=27.6

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCH
Q 020927           31 TAIVTGASSGIGTETARVLALRGVHVVMAVRNM   63 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~   63 (319)
                      .|+|.|| |--|...|..|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5889987 6678999999999999999998753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.04  E-value=0.53  Score=38.64  Aligned_cols=31  Identities=26%  Similarity=0.396  Sum_probs=26.2

Q ss_pred             EEEEeCCCCchhHHHHHHHHHCCC-EEEEEeCC
Q 020927           31 TAIVTGASSGIGTETARVLALRGV-HVVMAVRN   62 (319)
Q Consensus        31 ~vlItGas~gIG~aia~~La~~G~-~Vv~~~r~   62 (319)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            4778876 4899999999999997 59999875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.42  E-value=2.1  Score=33.67  Aligned_cols=81  Identities=17%  Similarity=0.165  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHH-CC----CEEEEEeCCHHHHHHHHHHHHhh----CCCCceEEEEcCCCCHHHHHHH
Q 020927           28 SGLTAIVTGASSGIGTETARVLAL-RG----VHVVMAVRNMAACREVKKAIVKE----IPNAKVQAMELDLSSLASVRKF   98 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~-~G----~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~   98 (319)
                      +|.+||..|+++|--.++.-+++. .|    .+|+.+.++++-++...+.+...    ..-.++.++..|..+-      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            678999999999988888887765 34    48999999988776665544321    1124688999997641      


Q ss_pred             HHHHHhcCCCccEEEEcccc
Q 020927           99 ASEFKSSGLPLNILINNAGI  118 (319)
Q Consensus        99 ~~~i~~~~~~id~lv~nag~  118 (319)
                          ....++.|.++.+++.
T Consensus       154 ----~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ----CGGGCSEEEEEECSCB
T ss_pred             ----cccccceeeEEEEeec
Confidence                1123579999998886

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=81.42  E-value=0.61  Score=37.83  Aligned_cols=42  Identities=26%  Similarity=0.265  Sum_probs=34.3

Q ss_pred             cCCCCCCCEEEEeCCCCchhHHH-----HHHHHHCCCEEEEEeCCHH
Q 020927           23 QGIDGSGLTAIVTGASSGIGTET-----ARVLALRGVHVVMAVRNMA   64 (319)
Q Consensus        23 ~~~~l~~k~vlItGas~gIG~ai-----a~~La~~G~~Vv~~~r~~~   64 (319)
                      ..|.=.++.++|+.|=||+|+..     |..|+++|.+|++++-++.
T Consensus        13 ~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          13 DDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             HHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            33445678888888899999986     7999999999999988754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=81.30  E-value=3.4  Score=32.15  Aligned_cols=77  Identities=13%  Similarity=0.045  Sum_probs=56.5

Q ss_pred             CCCEEEEeCCCCchhHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCCceEEEEcCCCCHHHHHHHHHHHHhcCC
Q 020927           28 SGLTAIVTGASSGIGTETARVLALRGVHVVMAVRNMAACREVKKAIVKEIPNAKVQAMELDLSSLASVRKFASEFKSSGL  107 (319)
Q Consensus        28 ~~k~vlItGas~gIG~aia~~La~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~i~~~~~  107 (319)
                      .|.+||=.|++.|.   ++..|++.+.+|+.++.++.-++.+.+.+.... -.++.+++.|..+..        +  ..+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~~~--------~--~~~   81 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAESLP--------F--PDD   81 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTBCC--------S--CTT
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccccc--------c--ccc
Confidence            46789999998884   446777888999999999988877766665542 246899999987632        0  124


Q ss_pred             CccEEEEcccc
Q 020927          108 PLNILINNAGI  118 (319)
Q Consensus       108 ~id~lv~nag~  118 (319)
                      .+|+++++-.+
T Consensus        82 ~fD~v~~~~~l   92 (234)
T d1xxla_          82 SFDIITCRYAA   92 (234)
T ss_dssp             CEEEEEEESCG
T ss_pred             ccceeeeecee
Confidence            79988887654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.29  E-value=0.88  Score=36.49  Aligned_cols=34  Identities=24%  Similarity=0.318  Sum_probs=29.0

Q ss_pred             CCCCCEEEEeCCCCchhHHHHHHHHHC-CCEEEEEe
Q 020927           26 DGSGLTAIVTGASSGIGTETARVLALR-GVHVVMAV   60 (319)
Q Consensus        26 ~l~~k~vlItGas~gIG~aia~~La~~-G~~Vv~~~   60 (319)
                      +++||+++|-|- |.+|..+++.|++. |++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999987 66999999999864 88888774